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ONTOLOGY REPORT - ANNOTATIONS


Term:regulation of embryonic development
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Accession:GO:0045995 term browser browse the term
Definition:Any process that modulates the frequency, rate or extent of embryonic development.


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regulation of embryonic development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAG6 BAG cochaperone 6 involved_in ISO (MGI:3703386|PMID:16287848) UniProt PMID:16287848 MGI:3703386 NCBI chr 6:31,300,126...31,313,829
Ensembl chr 6:32,190,037...32,204,321
JBrowse link
G DHX36 DEAH-box helicase 36 involved_in ISO (MGI:5427564|PMID:22422825) UniProt PMID:22422825 MGI:5427564 NCBI chr 3:151,331,468...151,382,406
Ensembl chr 3:158,885,541...158,935,871
JBrowse link
G EHMT1 euchromatic histone lysine methyltransferase 1 involved_in ISO (MGI:3575040|PMID:15774718) UniProt PMID:15774718 MGI:3575040 NCBI chr 9:108,724,568...108,951,077
Ensembl chr 9:137,764,950...137,895,564
JBrowse link
G HESX1 HESX homeobox 1 acts_upstream_of_or_within ISO (MGI:6451356|PMID:31761678) MGI PMID:31761678 MGI:6451356 NCBI chr 3:57,131,419...57,161,205
Ensembl chr 3:58,341,965...58,370,347
JBrowse link
G INSR insulin receptor involved_in ISO (PMID:7693131) BHF-UCL PMID:7693131 NCBI chr19:6,393,407...6,578,234
Ensembl chr19:7,260,246...7,414,889
JBrowse link
G NFE2L2 nuclear factor, erythroid 2 like 2 acts_upstream_of_or_within ISO (MGI:3040741|PMID:15087497) MGI PMID:15087497 MGI:3040741 NCBI chr2B:64,509,446...64,544,600
Ensembl chr2B:182,214,116...182,248,085
JBrowse link
G NIPBL NIPBL cohesin loading factor involved_in ISO (PMID:19242925) BHF-UCL PMID:19242925 NCBI chr 5:73,306,527...73,491,367
Ensembl chr 5:78,585,649...78,698,184
JBrowse link
G NOCT nocturnin involved_in ISO (MGI:5494762|PMID:23449310) UniProt PMID:23449310 MGI:5494762 NCBI chr 4:131,378,656...131,409,711
Ensembl chr 4:142,691,169...142,719,514
JBrowse link
G PHLDA2 pleckstrin homology like domain family A member 2 acts_upstream_of_or_within ISO (MGI:4420513|PMID:19884348) MGI PMID:19884348 MGI:4420513 NCBI chr11:2,953,864...2,954,923 JBrowse link
G RAB14 RAB14, member RAS oncogene family involved_in ISO (MGI:4889011|PMID:21238925) UniProt PMID:21238925 MGI:4889011 NCBI chr 9:92,305,656...92,329,419
Ensembl chr 9:120,654,180...120,666,170
JBrowse link
G RACGAP1 Rac GTPase activating protein 1 involved_in ISO (MGI:1934490|PMID:11287179) UniProt PMID:11287179 MGI:1934490 NCBI chr12:38,729,885...38,766,063
Ensembl chr12:39,625,796...39,672,256
JBrowse link
G SOX17 SRY-box transcription factor 17 involved_in ISO (MGI:2178090|PMID:11973269) UniProt PMID:11973269 MGI:2178090 NCBI chr 8:50,883,088...50,885,542
Ensembl chr 8:48,257,287...48,259,808
JBrowse link
G TDG thymine DNA glycosylase involved_in ISO (MGI:5141157|PMID:21722948), (MGI:5487523|PMID:21278727) UniProt PMID:21278727 PMID:21722948 MGI:5141157 MGI:5487523 NCBI chr12:101,543,945...101,567,035
Ensembl chr12:104,938,519...104,961,284
JBrowse link
G TRIP12 thyroid hormone receptor interactor 12 involved_in ISO (MGI:5303027|PMID:22028794) UniProt PMID:22028794 MGI:5303027 NCBI chr2B:117,013,343...117,175,296
Ensembl chr2B:235,820,182...235,979,780
JBrowse link
inhibition of neuroepithelial cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NODAL nodal growth differentiation factor acts_upstream_of_or_within ISO (MGI:3640721|PMID:16678814) MGI PMID:16678814 MGI:3640721 NCBI chr10:66,906,866...66,916,938
Ensembl chr10:69,433,959...69,443,972
JBrowse link
lung induction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTNNB1 catenin beta 1 acts_upstream_of_or_within ISO (MGI:4361775|PMID:19805295)
(MGI:4360856|PMID:19686689)
MGI PMID:19686689 PMID:19805295 MGI:4360856 MGI:4361775 NCBI chr 3:41,104,940...41,145,934
Ensembl chr 3:41,373,726...41,414,030
JBrowse link
G WNT2 Wnt family member 2 acts_upstream_of_or_within ISO (MGI:4360856|PMID:19686689) MGI PMID:19686689 MGI:4360856 NCBI chr 7:109,244,772...109,291,472
Ensembl chr 7:121,936,031...121,985,862
JBrowse link
G WNT2B Wnt family member 2B acts_upstream_of_or_within ISO (MGI:4360856|PMID:19686689) MGI PMID:19686689 MGI:4360856 NCBI chr 1:115,119,360...115,177,942
Ensembl chr 1:125,173,906...125,230,675
JBrowse link
negative regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TBX18 T-box transcription factor 18 involved_in ISO (MGI:3722519|PMID:17584735) BHF-UCL PMID:17584735 MGI:3722519 NCBI chr 6:82,621,987...82,654,137
Ensembl chr 6:85,862,810...85,938,799
JBrowse link
negative regulation of dermatome development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SFRP2 secreted frizzled related protein 2 involved_in ISO (MGI:1349347|PMID:10654605) BHF-UCL PMID:10654605 MGI:1349347 NCBI chr 4:146,123,075...146,131,543
Ensembl chr 4:157,944,733...157,953,258
JBrowse link
negative regulation of embryonic development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RPS6KA6 ribosomal protein S6 kinase A6 involved_in ISO (MGI:3041939|PMID:15121846) UniProt PMID:15121846 MGI:3041939 NCBI chr  X:73,131,457...73,261,906
Ensembl chr  X:83,243,957...83,373,194
JBrowse link
negative regulation of planar cell polarity pathway involved in neural tube closure term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRP6 LDL receptor related protein 6 acts_upstream_of_or_within ISO (MGI:4830282|PMID:19056682) MGI PMID:19056682 MGI:4830282 NCBI chr12:12,121,411...12,288,590
Ensembl chr12:12,508,108...12,657,973
JBrowse link
negative regulation of stomach neuroendocrine cell differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HES1 hes family bHLH transcription factor 1 acts_upstream_of_or_within ISO (MGI:3804618|PMID:18173746) MGI PMID:18173746 MGI:3804618 NCBI chr 3:191,432,513...191,435,387
Ensembl chr 3:201,749,044...201,754,257
JBrowse link
positive regulation of basement membrane assembly involved in embryonic body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLASP1 cytoplasmic linker associated protein 1 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chr2B:8,265,626...8,574,282
Ensembl chr2B:121,840,484...122,102,793
JBrowse link
G CLASP2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chr 3:33,418,300...33,640,185
Ensembl chr 3:33,721,153...33,938,560
JBrowse link
G DAG1 dystroglycan 1 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chr 3:49,396,180...49,464,689
Ensembl chr 3:50,640,615...50,703,852
JBrowse link
G PHLDB1 pleckstrin homology like domain family B member 1 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chr11:113,446,275...113,496,941
Ensembl chr11:117,376,205...117,426,391
JBrowse link
G PHLDB2 pleckstrin homology like domain family B member 2 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chr 3:108,878,798...109,120,501
Ensembl chr 3:115,745,634...116,044,586
JBrowse link
positive regulation of dermatome development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT1 Wnt family member 1 involved_in ISO (PMID:10654605) BHF-UCL PMID:10654605 NCBI chr12:39,767,839...39,772,460
Ensembl chr12:40,648,413...40,652,583
JBrowse link
G WNT3A Wnt family member 3A involved_in ISO (PMID:10654605) BHF-UCL PMID:10654605 NCBI chr 1:203,409,294...203,463,214
Ensembl chr 1:208,628,706...208,674,469
JBrowse link
G WNT4 Wnt family member 4 involved_in ISO (PMID:10654605) BHF-UCL PMID:10654605 NCBI chr 1:21,310,228...21,335,985
Ensembl chr 1:22,255,056...22,268,801
JBrowse link
positive regulation of embryonic development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMOT angiomotin acts_upstream_of_or_within ISO (MGI:2655854|PMID:12676095) MGI PMID:12676095 MGI:2655854 NCBI chr  X:101,907,032...101,973,052
Ensembl chr  X:112,362,633...112,428,216
JBrowse link
G B4GALT5 beta-1,4-galactosyltransferase 5 involved_in ISO (MGI:6238824|PMID:20574042) UniProt PMID:20574042 MGI:6238824 NCBI chr20:45,977,801...46,058,429
Ensembl chr20:47,041,469...47,123,214
JBrowse link
G CFL1 cofilin 1 involved_in ISO (MGI:6296386|PMID:25208553) UniProt PMID:25208553 MGI:6296386 NCBI chr11:61,215,092...61,218,628
Ensembl chr11:64,544,275...64,550,806
JBrowse link
G FOXA2 forkhead box A2 involved_in ISO (MGI:2157654|PMID:11291865) UniProt PMID:11291865 MGI:2157654 NCBI chr20:22,519,942...22,524,262 JBrowse link
G KHDC3L KH domain containing 3 like, subcortical maternal complex member involved_in ISO (MGI:6467697|PMID:29125140) UniProt PMID:29125140 MGI:6467697 NCBI chr 6:71,089,817...71,190,700
Ensembl chr 6:74,478,303...74,479,826
JBrowse link
G LHX1 LIM homeobox 1 involved_in ISO (MGI:2157654|PMID:11291865) UniProt PMID:11291865 MGI:2157654 NCBI chr17:20,134,308...20,140,652
Ensembl chr17:20,430,618...20,437,751
JBrowse link
G NLRP5 NLR family pyrin domain containing 5 involved_in ISO (MGI:5430272|PMID:22357545) UniProt PMID:22357545 MGI:5430272 NCBI chr19:53,021,034...53,083,590
Ensembl chr19:61,818,345...61,879,538
JBrowse link
G NR2C2 nuclear receptor subfamily 2 group C member 2 involved_in ISO (MGI:4355296|PMID:19131575) UniProt PMID:19131575 MGI:4355296 NCBI chr 3:14,869,292...14,973,977
Ensembl chr 3:15,220,110...15,306,242
JBrowse link
G OTX2 orthodenticle homeobox 2 involved_in ISO (MGI:2157654|PMID:11291865) UniProt PMID:11291865 MGI:2157654 NCBI chr14:37,370,926...37,381,610
Ensembl chr14:55,641,349...55,651,012
JBrowse link
G PAFAH1B1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 involved_in ISO (MGI:5477842|PMID:23533177) CACAO PMID:23533177 MGI:5477842 NCBI chr17:2,584,349...2,676,928
Ensembl chr17:2,590,007...2,680,994
JBrowse link
G PLCB1 phospholipase C beta 1 involved_in ISO (MGI:2136696|PMID:11464583) BHF-UCL PMID:11464583 MGI:2136696 NCBI chr20:8,106,665...8,858,572
Ensembl chr20:7,887,960...8,636,019
JBrowse link
G RBM19 RNA binding motif protein 19 involved_in ISO (MGI:3608543|PMID:16027046) UniProt PMID:16027046 MGI:3608543 NCBI chr12:111,396,648...111,564,476
Ensembl chr12:114,802,909...114,946,354
JBrowse link
G TLE6 TLE family member 6, subcortical maternal complex member involved_in ISO (MGI:6296386|PMID:25208553) UniProt PMID:25208553 MGI:6296386 NCBI chr19:2,003,011...2,020,577
Ensembl chr19:2,953,184...2,978,179
JBrowse link
G UTP25 UTP25 small subunit processor component involved_in ISO (MGI:6285032|PMID:29262616) UniProt PMID:29262616 MGI:6285032 NCBI chr 1:185,403,715...185,433,830
Ensembl chr 1:190,268,857...190,292,980
JBrowse link
G ZBED3 zinc finger BED-type containing 3 involved_in ISO (MGI:6467696|PMID:28992324) UniProt PMID:28992324 MGI:6467696 NCBI chr 5:38,214,260...38,229,373 JBrowse link
positive regulation of gastrulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FOXA2 forkhead box A2 involved_in ISO (MGI:2157654|PMID:11291865) UniProt PMID:11291865 MGI:2157654 NCBI chr20:22,519,942...22,524,262 JBrowse link
G LHX1 LIM homeobox 1 involved_in ISO (MGI:2157654|PMID:11291865) UniProt PMID:11291865 MGI:2157654 NCBI chr17:20,134,308...20,140,652
Ensembl chr17:20,430,618...20,437,751
JBrowse link
G OSR1 odd-skipped related transcription factor 1 involved_in ISO (PMID:21281489) UniProt PMID:21281489 NCBI chr2A:19,333,101...19,340,267
Ensembl chr2A:19,451,067...19,458,229
JBrowse link
G OSR2 odd-skipped related transciption factor 2 involved_in ISO (MGI:5009762|PMID:21281489) UniProt PMID:21281489 MGI:5009762 NCBI chr 8:95,590,753...95,598,491
Ensembl chr 8:97,768,980...97,776,669
JBrowse link
G OTX2 orthodenticle homeobox 2 involved_in ISO (MGI:2157654|PMID:11291865) UniProt PMID:11291865 MGI:2157654 NCBI chr14:37,370,926...37,381,610
Ensembl chr14:55,641,349...55,651,012
JBrowse link
G SCX scleraxis bHLH transcription factor involved_in ISO (MGI:1343990|PMID:10477299) UniProt PMID:10477299 MGI:1343990 NCBI chr 8:141,027,765...141,031,194 JBrowse link
G TENM4 teneurin transmembrane protein 4 involved_in ISO (MGI:3531238|PMID:15489520) UniProt PMID:15489520 MGI:3531238 NCBI chr11:73,712,808...75,001,831
Ensembl chr11:77,338,422...77,743,909
JBrowse link
regulation of gastrulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CLASP1 cytoplasmic linker associated protein 1 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chr2B:8,265,626...8,574,282
Ensembl chr2B:121,840,484...122,102,793
JBrowse link
G CLASP2 cytoplasmic linker associated protein 2 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chr 3:33,418,300...33,640,185
Ensembl chr 3:33,721,153...33,938,560
JBrowse link
G CRB2 crumbs cell polarity complex component 2 involved_in ISO (MGI:5700252|PMID:26496195) UniProt PMID:26496195 MGI:5700252 NCBI chr 9:94,473,423...94,511,285
Ensembl chr 9:123,011,968...123,032,855
JBrowse link
G DAG1 dystroglycan 1 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chr 3:49,396,180...49,464,689
Ensembl chr 3:50,640,615...50,703,852
JBrowse link
G HNF4A hepatocyte nuclear factor 4 alpha acts_upstream_of_or_within ISO (MGI:69170|PMID:7958910) MGI PMID:7958910 MGI:69170 NCBI chr20:40,684,450...40,763,824
Ensembl chr20:41,779,034...41,856,536
JBrowse link
G NODAL nodal growth differentiation factor acts_upstream_of_or_within ISO (MGI:4430444|PMID:20040491) MGI PMID:20040491 MGI:4430444 NCBI chr10:66,906,866...66,916,938
Ensembl chr10:69,433,959...69,443,972
JBrowse link
G PHLDB1 pleckstrin homology like domain family B member 1 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chr11:113,446,275...113,496,941
Ensembl chr11:117,376,205...117,426,391
JBrowse link
G PHLDB2 pleckstrin homology like domain family B member 2 involved_in ISO (PMID:23940118) UniProt PMID:23940118 NCBI chr 3:108,878,798...109,120,501
Ensembl chr 3:115,745,634...116,044,586
JBrowse link
G POGLUT1 protein O-glucosyltransferase 1 involved_in ISO (MGI:5700252|PMID:26496195) UniProt PMID:26496195 MGI:5700252 NCBI chr 3:116,591,271...116,617,382
Ensembl chr 3:123,503,899...123,529,919
JBrowse link
G TGIF1 TGFB induced factor homeobox 1 acts_upstream_of_or_within ISO (MGI:4430444|PMID:20040491) MGI PMID:20040491 MGI:4430444 NCBI chr18:10,819,015...10,830,282
Ensembl chr18:13,128,359...13,139,145
JBrowse link
G TGIF2 TGFB induced factor homeobox 2 acts_upstream_of_or_within ISO (MGI:4430444|PMID:20040491) MGI PMID:20040491 MGI:4430444 NCBI chr20:32,906,641...32,927,119
Ensembl chr20:34,028,415...34,046,354
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12614
    multicellular organismal process 6524
      multicellular organism development 5023
        embryo development 1212
          regulation of embryonic development 55
            inhibition of neuroepithelial cell differentiation + 2
            lung induction + 3
            negative regulation of embryonic development + 2
            positive regulation of embryonic development + 22
            positive regulation of posterior neural plate formation by Wnt signaling pathway 0
            positive regulation of posterior neural plate formation by fibroblast growth factor receptor signaling pathway 0
            regulation of basement membrane assembly involved in embryonic body morphogenesis + 5
            regulation of basement membrane disassembly involved in semicircular canal fusion by cell communication 0
            regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation + 1
            regulation of embryonic cell shape + 0
            regulation of gastrulation + 18
            regulation of planar cell polarity pathway involved in neural tube closure + 1
Path 2
Term Annotations click to browse term
  biological_process 12614
    biological regulation 9196
      regulation of biological process 8690
        regulation of multicellular organismal process 2713
          regulation of multicellular organismal development 1383
            regulation of embryonic development 55
              inhibition of neuroepithelial cell differentiation + 2
              lung induction + 3
              negative regulation of embryonic development + 2
              positive regulation of embryonic development + 22
              positive regulation of posterior neural plate formation by Wnt signaling pathway 0
              positive regulation of posterior neural plate formation by fibroblast growth factor receptor signaling pathway 0
              regulation of basement membrane assembly involved in embryonic body morphogenesis + 5
              regulation of basement membrane disassembly involved in semicircular canal fusion by cell communication 0
              regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation + 1
              regulation of embryonic cell shape + 0
              regulation of gastrulation + 18
              regulation of planar cell polarity pathway involved in neural tube closure + 1
paths to the root