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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of nucleotide metabolic process
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Accession:GO:0045981 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving nucleotides.
Synonyms:exact_synonym: positive regulation of nucleotide metabolism;   up regulation of nucleotide metabolic process;   upregulation of nucleotide metabolic process
 narrow_synonym: activation of nucleotide metabolic process;   stimulation of nucleotide metabolic process


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positive regulation of ATP biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2l1 Bcl2-like 1 IMP PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr 3:148,259,594...148,314,191
Ensembl chr 3:148,259,596...148,313,810
JBrowse link
G Eno1 enolase 1 ISO UniProtKB:Q01986 (PMID:15459207) RGD PMID:15459207 NCBI chr 5:167,288,223...167,299,610
Ensembl chr 5:167,288,223...167,299,609
JBrowse link
G Il4 interleukin 4 ISO (MGI:MGI:6304699|PMID:29061364) RGD PMID:29061364 MGI:MGI:6304699 NCBI chr10:38,963,979...38,969,531
Ensembl chr10:38,963,979...38,969,531
JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 IGI
IMP
PMID:15459207 CAFA PMID:15459207, PMID:15459207 RGD:12793039, RGD:12793039 NCBI chr 8:69,134,218...69,722,573
Ensembl chr 8:69,134,223...69,164,758
JBrowse link
G Mt-co2 mitochondrially encoded cytochrome c oxidase II IMP RGD PMID:19306371 RGD:13506652 NCBI chr MT:7,006...7,689
Ensembl chr MT:7,006...7,689
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor IMP RGD PMID:22629444 RGD:7240532 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link
G Ndufc2 NADH:ubiquinone oxidoreductase subunit C2 IMP RGD PMID:26888427 RGD:11040458 NCBI chr 1:162,369,801...162,376,024
Ensembl chr 1:162,369,801...162,376,023
JBrowse link
G Pid1 phosphotyrosine interaction domain containing 1 ISO (MGI:MGI:5306739|PMID:21080215) RGD PMID:21080215 MGI:MGI:5306739 NCBI chr 9:91,667,748...91,683,468
Ensembl chr 9:91,665,986...91,882,927
JBrowse link
G Ppara peroxisome proliferator activated receptor alpha ISO (PMID:31574452) RGD PMID:31574452 NCBI chr 7:126,618,872...126,687,282
Ensembl chr 7:126,619,196...126,681,752
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO
ISS
(MGI:MGI:5463828|PMID:23150719)
GO_REF:0000024
RGD
UniProt
PMID:23150719 GO_REF:0000024, MGI:MGI:5463828 NCBI chr14:63,095,291...63,190,688
Ensembl chr14:63,095,720...63,187,009
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase IMP RGD PMID:24096089 RGD:10413842 NCBI chr 1:48,880,015...50,069,998 JBrowse link
G Sirt1 sirtuin 1 ISO (PMID:24747689) RGD PMID:24747689 NCBI chr20:26,831,971...26,851,587
Ensembl chr20:26,833,357...26,852,199
JBrowse link
G Slc25a12 solute carrier family 25 member 12 IMP RGD PMID:19764902 RGD:13628741 NCBI chr 3:57,881,951...57,998,214
Ensembl chr 3:57,882,370...57,957,346
JBrowse link
G Stat3 signal transducer and activator of transcription 3 IMP RGD PMID:23590160 RGD:8694322 NCBI chr10:88,790,401...88,842,263
Ensembl chr10:88,790,408...88,842,233
JBrowse link
G Taz tafazzin IMP RGD PMID:20348225 RGD:13432160 NCBI chr  X:156,421,006...156,429,461
Ensembl chr  X:156,421,009...156,428,593
JBrowse link
G Tmsb4x thymosin beta 4, X-linked ISO (PMID:21106936) RGD PMID:21106936 NCBI chr  X:28,593,405...28,617,267
Ensembl chr  X:28,593,405...28,595,395
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 ISO (MGI:MGI:5906931|PMID:28802038) RGD PMID:28802038 MGI:MGI:5906931 NCBI chr 9:14,611,541...14,618,076
Ensembl chr 9:14,611,561...14,618,013
JBrowse link
G Vcp valosin-containing protein ISO (PMID:23498975) RGD PMID:23498975 NCBI chr 5:58,426,548...58,445,953
Ensembl chr 5:58,426,549...58,445,953
JBrowse link
positive regulation of glycolytic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein ISO UniProtKB:P49768 (PMID:29061364) RGD PMID:29061364 NCBI chr11:24,425,013...24,641,872
Ensembl chr11:24,425,005...24,641,858
JBrowse link
G Entpd5 ectonucleoside triphosphate diphosphohydrolase 5 ISO
ISS
(MGI:MGI:4881347|PMID:21074248)
GO_REF:0000024
RGD
UniProt
PMID:21074248 GO_REF:0000024, MGI:MGI:4881347 NCBI chr 6:108,087,677...108,123,811
Ensembl chr 6:108,087,418...108,120,579
JBrowse link
G Esrrb estrogen-related receptor beta IDA PMID:24481529 BHF-UCL PMID:24481529 RGD:12910990 NCBI chr 6:110,360,940...110,458,406
Ensembl chr 6:110,410,141...110,455,906
JBrowse link
G Gck glucokinase IDA RGD PMID:17553851 RGD:2301905 NCBI chr14:86,149,146...86,191,589
Ensembl chr14:86,148,928...86,190,659
JBrowse link
G Gpd1 glycerol-3-phosphate dehydrogenase 1 ISO MGI:MGI:3692960 (MGI:MGI:1927687|PMID:11147825) RGD PMID:11147825 MGI:MGI:1927687 NCBI chr 7:141,368,928...141,377,931
Ensembl chr 7:141,370,491...141,377,928
JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A ISO (MGI:MGI:3766710|PMID:17408640) RGD PMID:17408640 MGI:MGI:3766710 NCBI chr15:56,666,152...56,732,469
Ensembl chr15:56,666,012...56,735,382
JBrowse link
G Ifng interferon gamma ISO (MGI:MGI:6304699|PMID:29061364) RGD PMID:29061364 MGI:MGI:6304699 NCBI chr 7:61,337,383...61,341,419
Ensembl chr 7:61,337,381...61,341,419
JBrowse link
G Igf1 insulin-like growth factor 1 ISO
IEA
(PMID:7688386)
GO_REF:0000107
RGD
Ensembl
PMID:7688386 GO_REF:0000107 NCBI chr 7:28,412,123...28,491,815
Ensembl chr 7:28,412,198...28,486,609
JBrowse link
G Ins2 insulin 2 ISO (PMID:381941), (PMID:7688386) RGD PMID:381941, PMID:7688386 NCBI chr 1:215,856,967...215,858,034
Ensembl chr 1:215,856,971...215,858,034
JBrowse link
G Insr insulin receptor ISO
IEA
(PMID:7693131)
GO_REF:0000107
RGD
Ensembl
PMID:7693131 GO_REF:0000107 NCBI chr12:1,682,527...1,816,414
Ensembl chr12:1,680,957...1,816,414
JBrowse link
G Mif macrophage migration inhibitory factor IMP RGD PMID:11086030 RGD:1642010 NCBI chr20:13,715,219...13,732,980
Ensembl chr20:13,732,198...13,732,859
JBrowse link
G Mlxipl MLX interacting protein-like ISO (PMID:19995986)
(MGI:MGI:3041761|PMID:15118080)
RGD PMID:15118080, PMID:19995986 MGI:MGI:3041761 NCBI chr12:24,590,645...24,619,639 JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor IMP RGD PMID:22842522 RGD:7207891 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link
G P2rx7 purinergic receptor P2X 7 ISO
IEA
(PMID:22898868)
GO_REF:0000107
RGD
Ensembl
PMID:22898868 GO_REF:0000107 NCBI chr12:39,353,613...39,396,042
Ensembl chr12:39,353,613...39,396,042
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 IDA PMID:11069105 UniProt PMID:11069105 RGD:8554193 NCBI chr 2:54,857,688...54,893,404
Ensembl chr 2:54,857,688...54,893,404
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 IDA PMID:11069105 UniProt PMID:11069105 RGD:8554193 NCBI chr 5:124,568,845...124,642,569
Ensembl chr 5:124,574,079...124,642,569
JBrowse link
G Prxl2c peroxiredoxin like 2C ISO (PMID:29901208) RGD PMID:29901208 NCBI chr17:1,798,224...1,830,011
Ensembl chr17:1,798,388...1,830,001
JBrowse link
G Psen1 presenilin 1 ISO UniProtKB:P05067 (PMID:29061364) RGD PMID:29061364 NCBI chr 6:107,169,514...107,221,000
Ensembl chr 6:107,169,528...107,216,798
JBrowse link
G Slc4a4 solute carrier family 4 member 4 ISO
IEA
UniProtKB:Q9JK62 (PMID:21976511)
(MGI:MGI:5295108|PMID:21976511)
GO_REF:0000107
RGD
Ensembl
PMID:21976511 GO_REF:0000107, MGI:MGI:5295108 NCBI chr14:20,476,258...20,817,042
Ensembl chr14:20,479,323...20,920,286
JBrowse link
G Zbtb20 zinc finger and BTB domain containing 20 ISO (MGI:MGI:5913553|PMID:28327662) RGD PMID:28327662 MGI:MGI:5913553 NCBI chr11:62,014,925...62,561,113
Ensembl chr11:62,014,925...62,451,184
JBrowse link
positive regulation of guanylate cyclase activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2b adenosine A2B receptor ISO
IEA
MGI:MGI:3773754 (MGI:MGI:3794903|PMID:18340377)
GO_REF:0000107
RGD
Ensembl
PMID:18340377 GO_REF:0000107, MGI:MGI:3794903 NCBI chr10:48,569,563...48,586,366
Ensembl chr10:48,569,555...48,586,365
JBrowse link
G Guca1a guanylate cyclase activator 1A IDA RGD PMID:12545196 RGD:1599357 NCBI chr 9:15,609,804...15,620,030
Ensembl chr 9:15,609,804...15,620,029
JBrowse link
G Guca1b guanylate cyclase activator 1B IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:15,621,083...15,629,017
Ensembl chr 9:15,621,083...15,629,017
JBrowse link
G Guca2a guanylate cyclase activator 2A IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:138,685,634...138,687,476
Ensembl chr 5:138,685,624...138,687,816
JBrowse link
G Guca2b guanylate cyclase activator 2B IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:138,695,591...138,697,641
Ensembl chr 5:138,695,591...138,697,641
JBrowse link
G Nos1 nitric oxide synthase 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:44,214,949...44,405,530
Ensembl chr12:44,213,943...44,520,341
JBrowse link
G Nos2 nitric oxide synthase 2 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:66,188,290...66,221,621
Ensembl chr10:66,189,786...66,313,190
JBrowse link
G Nos3 nitric oxide synthase 3 ISO
IBA
IEA
(PMID:17502619)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:17502619, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 4:7,321,908...7,342,404
Ensembl chr 4:7,320,668...7,342,410
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20028
    metabolic process 12271
      positive regulation of metabolic process 4067
        positive regulation of small molecule metabolic process 163
          positive regulation of nucleotide metabolic process 45
            positive regulation of nucleotide biosynthetic process + 26
            positive regulation of nucleotide catabolic process + 0
            positive regulation of purine nucleotide metabolic process + 45
Path 2
Term Annotations click to browse term
  biological_process 20028
    metabolic process 12271
      cellular metabolic process 11085
        cellular nitrogen compound metabolic process 6696
          nucleobase-containing compound metabolic process 5489
            nucleobase-containing small molecule metabolic process 591
              nucleoside phosphate metabolic process 511
                nucleotide metabolic process 504
                  regulation of nucleotide metabolic process 88
                    positive regulation of nucleotide metabolic process 45
                      positive regulation of nucleotide biosynthetic process + 26
                      positive regulation of nucleotide catabolic process + 0
                      positive regulation of purine nucleotide metabolic process + 45
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.