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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of nucleotide metabolic process
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Accession:GO:0045981 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving nucleotides.
Synonyms:exact_synonym: positive regulation of nucleotide metabolism;   up regulation of nucleotide metabolic process;   upregulation of nucleotide metabolic process
 narrow_synonym: activation of nucleotide metabolic process;   stimulation of nucleotide metabolic process


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positive regulation of ATP biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2L1 BCL2 like 1 ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr17:35,366,139...35,415,798
Ensembl chr17:35,366,141...35,415,359
JBrowse link
G ENO1 enolase 1 ISO (PMID:15459207) CAFA PMID:15459207 NCBI chr 6:69,385,879...69,401,664
Ensembl chr 6:69,385,882...69,401,117
JBrowse link
G IL4 interleukin 4 ISO (MGI:MGI:6304699|PMID:29061364) ARUK-UCL PMID:29061364 MGI:MGI:6304699 NCBI chr 2:134,986,817...134,994,365
Ensembl chr 2:134,986,817...134,994,365
JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 ISO PMID:15459207 CAFA PMID:15459207 RGD:12793039 NCBI chr 1:164,381,892...164,469,313
Ensembl chr 1:164,381,845...164,471,226
JBrowse link
G MT-CO2 mitochondrially encoded cytochrome c oxidase II ISO RGD PMID:19306371 RGD:13506652 NCBI chr MT:8,203...8,890
Ensembl chr MT:8,203...8,890
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:22629444 RGD:7240532 NCBI chr 4:12,455,141...12,460,360
Ensembl chr 4:12,455,119...12,461,078
JBrowse link
G NDUFC2 NADH:ubiquinone oxidoreductase subunit C2 ISO RGD PMID:26888427 RGD:11040458 NCBI chr 9:12,486,488...12,492,507
Ensembl chr 9:12,485,167...12,492,504
JBrowse link
G PID1 phosphotyrosine interaction domain containing 1 IEA Ensembl GO_REF:0000107 NCBI chr15:130,080,821...130,215,548
Ensembl chr15:130,075,040...130,332,689
JBrowse link
G PPARA peroxisome proliferator activated receptor alpha ISO (PMID:31574452) ARUK-UCL PMID:31574452 NCBI chr 5:3,302,755...3,321,091
Ensembl chr 5:3,300,708...3,366,361
JBrowse link
G PPARGC1A PPARG coactivator 1 alpha ISS UniProt GO_REF:0000024 NCBI chr 8:17,841,844...18,527,953
Ensembl chr 8:17,841,844...17,961,909
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase ISO RGD PMID:24096089 RGD:10413842 NCBI chr 1:5,698,508...6,731,132
Ensembl chr 1:5,465,511...6,730,881
JBrowse link
G SIRT1 sirtuin 1 IMP (PMID:24747689) AgBase PMID:24747689 NCBI chr14:71,091,167...71,126,351
Ensembl chr14:71,091,157...71,123,299
JBrowse link
G SLC25A12 solute carrier family 25 member 12 ISO RGD PMID:19764902 RGD:13628741 NCBI chr15:77,895,935...78,021,930
Ensembl chr15:77,895,935...78,098,383
JBrowse link
G STAT3 signal transducer and activator of transcription 3 ISO RGD PMID:23590160 RGD:8694322 NCBI chr12:20,407,316...20,471,091
Ensembl chr12:20,407,233...20,472,993
JBrowse link
G TAZ tafazzin ISO RGD PMID:20348225 RGD:13432160 NCBI chr  X:124,940,036...124,946,275
Ensembl chr  X:124,940,031...124,947,241
JBrowse link
G TMSB4X thymosin beta 4 X-linked ISO (PMID:21106936) CAFA PMID:21106936 NCBI chr  X:9,649,516...9,651,662
Ensembl chr  X:9,650,179...9,651,661
JBrowse link
G TREM2 triggering receptor expressed on myeloid cells 2 ISO (MGI:MGI:5906931|PMID:28802038) ARUK-UCL PMID:28802038 MGI:MGI:5906931 NCBI chr 7:36,465,921...36,471,509
Ensembl chr 7:36,464,034...36,471,516
JBrowse link
G VCP valosin containing protein IEA Ensembl GO_REF:0000107 NCBI chr 1:235,854,532...235,869,712
Ensembl chr 1:235,796,446...235,876,321
JBrowse link
positive regulation of glycolytic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APP amyloid beta precursor protein IEA Ensembl GO_REF:0000107 NCBI chr13:189,434,854...189,716,120
Ensembl chr13:189,434,869...189,716,057
JBrowse link
G ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 (inactive) ISO (MGI:MGI:4881347|PMID:21074248) UniProtKB PMID:21074248 MGI:MGI:4881347 NCBI chr 7:97,270,698...97,316,578
Ensembl chr 7:97,262,305...97,316,571
JBrowse link
G ESRRB estrogen related receptor beta ISO PMID:24481529 BHF-UCL PMID:24481529 RGD:12910990 NCBI chr 7:99,511,135...99,699,478
Ensembl chr 7:99,514,168...99,699,011
JBrowse link
G GCK glucokinase ISO RGD PMID:17553851 RGD:2301905 NCBI chr18:50,979,167...51,024,500
Ensembl chr18:50,790,472...51,028,917
JBrowse link
G GPD1 glycerol-3-phosphate dehydrogenase 1 IEA Ensembl GO_REF:0000107 NCBI chr 5:16,008,179...16,021,676
Ensembl chr 5:16,007,448...16,017,825
JBrowse link
G HTR2A 5-hydroxytryptamine receptor 2A IEA Ensembl GO_REF:0000107 NCBI chr11:20,555,939...20,620,225
Ensembl chr11:20,555,961...20,619,629
JBrowse link
G IFNG interferon gamma ISO (MGI:MGI:6304699|PMID:29061364) ARUK-UCL PMID:29061364 MGI:MGI:6304699 NCBI chr 5:32,477,906...32,482,670
Ensembl chr 5:32,477,848...32,482,752
JBrowse link
G IGF1 insulin like growth factor 1 IEA Ensembl GO_REF:0000107 NCBI chr 5:81,762,027...81,909,253
Ensembl chr 5:81,775,970...81,848,037
JBrowse link
G INS insulin IEA Ensembl GO_REF:0000107 NCBI chr 2:1,496,842...1,498,052
Ensembl chr 2:1,496,842...1,497,841
JBrowse link
G INSR insulin receptor IEA Ensembl GO_REF:0000107 NCBI chr 2:71,797,209...71,939,923
Ensembl chr 2:71,797,204...71,936,139
JBrowse link
G MIF macrophage migration inhibitory factor ISO RGD PMID:11086030 RGD:1642010 NCBI chr14:49,840,303...49,841,063
Ensembl chr14:49,840,305...49,862,317
JBrowse link
G MLXIPL MLX interacting protein like IEA Ensembl GO_REF:0000107 NCBI chr 3:10,898,675...10,934,257
Ensembl chr 3:10,894,270...10,934,047
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:22842522 RGD:7207891 NCBI chr 4:12,455,141...12,460,360
Ensembl chr 4:12,455,119...12,461,078
JBrowse link
G P2RX7 purinergic receptor P2X 7 IEA Ensembl GO_REF:0000107 NCBI chr14:31,415,188...31,476,502
Ensembl chr14:31,415,192...31,476,472
JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 ISS UniProt GO_REF:0000024 NCBI chr16:25,745,902...25,783,524
Ensembl chr16:25,745,321...25,783,610
JBrowse link
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 ISO PMID:11069105 UniProt PMID:11069105 RGD:8554193 NCBI chr 6:155,683,392...155,754,283
Ensembl chr 6:155,681,781...155,754,272
JBrowse link
G PRXL2C peroxiredoxin like 2C IEA Ensembl GO_REF:0000107 NCBI chr10:25,428,129...25,444,609
Ensembl chr10:25,428,164...25,446,185
JBrowse link
G PSEN1 presenilin 1 IEA Ensembl GO_REF:0000107 NCBI chr 7:96,478,179...96,567,884
Ensembl chr 7:96,478,181...96,569,132
JBrowse link
G SLC4A4 solute carrier family 4 member 4 IEA Ensembl GO_REF:0000107 NCBI chr 8:67,768,955...68,177,213
Ensembl chr 8:67,706,880...68,290,496
JBrowse link
G ZBTB20 zinc finger and BTB domain containing 20 IEA Ensembl GO_REF:0000107 NCBI chr13:144,855,821...145,668,320
Ensembl chr13:144,855,976...145,754,184
JBrowse link
positive regulation of guanylate cyclase activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADORA2B adenosine A2b receptor IEA Ensembl GO_REF:0000107 NCBI chr12:59,431,834...59,449,701
Ensembl chr12:59,393,220...59,449,692
JBrowse link
G GUCA1A guanylate cyclase activator 1A IEA GOC GO_REF:0000108 NCBI chr 7:37,282,630...37,296,713
Ensembl chr 7:37,282,700...37,296,717
JBrowse link
G GUCA1B guanylate cyclase activator 1B IEA GOC GO_REF:0000108 NCBI chr 7:37,297,901...37,311,158
Ensembl chr 7:37,297,905...37,310,170
JBrowse link
G GUCA2A guanylate cyclase activator 2A IEA GOC GO_REF:0000108 NCBI chr 6:169,146,336...169,148,284 JBrowse link
G GUCA2B guanylate cyclase activator 2B IEA GOC GO_REF:0000108 NCBI chr 6:169,152,172...169,154,557
Ensembl chr 6:169,152,179...169,154,551
JBrowse link
G NOS1 nitric oxide synthase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:35,112,898...35,299,297
Ensembl chr14:35,113,184...35,295,972
JBrowse link
G NOS3 nitric oxide synthase 3 IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr18:6,209,218...6,228,912
Ensembl chr18:6,209,156...6,228,938
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16545
    metabolic process 10588
      positive regulation of metabolic process 3836
        positive regulation of small molecule metabolic process 163
          positive regulation of nucleotide metabolic process 44
            positive regulation of nucleotide biosynthetic process + 25
            positive regulation of nucleotide catabolic process + 0
            positive regulation of purine nucleotide metabolic process + 44
Path 2
Term Annotations click to browse term
  biological_process 16545
    metabolic process 10588
      cellular metabolic process 9576
        cellular nitrogen compound metabolic process 5636
          nucleobase-containing compound metabolic process 4911
            nucleobase-containing small molecule metabolic process 506
              nucleoside phosphate metabolic process 436
                nucleotide metabolic process 428
                  regulation of nucleotide metabolic process 86
                    positive regulation of nucleotide metabolic process 44
                      positive regulation of nucleotide biosynthetic process + 25
                      positive regulation of nucleotide catabolic process + 0
                      positive regulation of purine nucleotide metabolic process + 44
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.