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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of nucleotide metabolic process
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Accession:GO:0045981 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving nucleotides.
Synonyms:exact_synonym: positive regulation of nucleotide metabolism;   up regulation of nucleotide metabolic process;   upregulation of nucleotide metabolic process
 narrow_synonym: activation of nucleotide metabolic process;   stimulation of nucleotide metabolic process


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positive regulation of ATP biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2L1 BCL2 like 1 ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr20:31,664,452...31,723,963
Ensembl chr20:31,664,452...31,723,989
JBrowse link
G ENO1 enolase 1 IGI
IDA
(PMID:15459207) CAFA PMID:15459207 NCBI chr 1:8,861,000...8,878,686
Ensembl chr 1:8,861,000...8,879,190
JBrowse link
G IL4 interleukin 4 ISS ARUK-UCL GO_REF:0000024 NCBI chr 5:132,673,989...132,682,678
Ensembl chr 5:132,673,986...132,682,678
JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 ISO PMID:15459207 CAFA PMID:15459207 RGD:12793039 NCBI chr15:66,386,912...66,491,544
Ensembl chr15:66,386,817...66,492,312
Ensembl chr15:66,386,817...66,492,312
JBrowse link
G MT-CO2 mitochondrially encoded cytochrome c oxidase II IEA Ensembl GO_REF:0000107 NCBI chr MT:7,586...8,269
Ensembl chr MT:7,586...8,269
JBrowse link
G MTCO2P12 MT-CO2 pseudogene 12 IEA Ensembl GO_REF:0000107 NCBI chr 1:632,757...633,438
Ensembl chr 1:632,757...633,438
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor IEA Ensembl GO_REF:0000107 NCBI chr 8:127,735,434...127,742,951
Ensembl chr 8:127,735,434...127,742,951
JBrowse link
G NDUFC2 NADH:ubiquinone oxidoreductase subunit C2 ISO RGD PMID:26888427 RGD:11040458 NCBI chr11:78,068,297...78,079,862
Ensembl chr11:78,068,297...78,079,862
JBrowse link
G PID1 phosphotyrosine interaction domain containing 1 ISS BHF-UCL GO_REF:0000024 NCBI chr 2:229,023,973...229,271,287
Ensembl chr 2:228,850,526...229,271,287
Ensembl chr 2:228,850,526...229,271,287
JBrowse link
G PINK1 PTEN induced kinase 1 TAS (PMID:20871098) ParkinsonsUK-UCL PMID:20871098 NCBI chr 1:20,633,458...20,651,511
Ensembl chr 1:20,633,458...20,651,511
JBrowse link
G PPARA peroxisome proliferator activated receptor alpha IMP (PMID:31574452) ARUK-UCL PMID:31574452 NCBI chr22:46,150,526...46,243,756
Ensembl chr22:46,150,521...46,243,756
JBrowse link
G PPARGC1A PPARG coactivator 1 alpha ISS UniProtKB GO_REF:0000024 NCBI chr 4:23,792,021...24,472,905
Ensembl chr 4:23,755,041...23,904,089
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase ISO RGD PMID:24096089 RGD:10413842 NCBI chr 6:161,347,417...162,727,802
Ensembl chr 6:161,347,417...162,727,771
Ensembl chr 6:161,347,417...162,727,771
JBrowse link
G SIRT1 sirtuin 1 ISO (PMID:24747689) AgBase PMID:24747689 NCBI chr10:67,884,656...67,918,390
Ensembl chr10:67,884,656...67,918,390
JBrowse link
G SLC25A12 solute carrier family 25 member 12 IEA Ensembl GO_REF:0000107 NCBI chr 2:171,783,405...171,894,244
Ensembl chr 2:171,783,405...171,999,859
JBrowse link
G STAT3 signal transducer and activator of transcription 3 IEA Ensembl GO_REF:0000107 NCBI chr17:42,313,324...42,388,502
Ensembl chr17:42,313,324...42,388,482
Ensembl chr17:42,313,324...42,388,482
JBrowse link
G TAZ tafazzin IEA Ensembl GO_REF:0000107 NCBI chr  X:154,411,539...154,421,726
Ensembl chr  X:154,411,524...154,421,726
JBrowse link
G TMSB4X thymosin beta 4 X-linked IDA (PMID:21106936) CAFA PMID:21106936 NCBI chr  X:12,975,110...12,977,223
Ensembl chr  X:12,975,110...12,977,227
JBrowse link
G TREM2 triggering receptor expressed on myeloid cells 2 ISS ARUK-UCL GO_REF:0000024 NCBI chr 6:41,158,508...41,163,116
Ensembl chr 6:41,158,506...41,163,186
JBrowse link
G VCP valosin containing protein IMP (PMID:23498975) ParkinsonsUK-UCL PMID:23498975 NCBI chr 9:35,056,064...35,072,625
Ensembl chr 9:35,056,064...35,072,627
JBrowse link
positive regulation of glycolytic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APP amyloid beta precursor protein IGI (PMID:29061364) ARUK-UCL PMID:29061364 NCBI chr21:25,880,550...26,171,128
Ensembl chr21:25,880,550...26,171,128
JBrowse link
G ARNT aryl hydrocarbon receptor nuclear translocator IC (PMID:8089148) BHF-UCL PMID:8089148 NCBI chr 1:150,809,713...150,876,737
Ensembl chr 1:150,809,713...150,876,708
JBrowse link
G ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 (inactive) ISS UniProtKB GO_REF:0000024 NCBI chr14:73,955,329...74,019,326
Ensembl chr14:73,958,010...74,019,399
JBrowse link
G ESRRB estrogen related receptor beta IEA Ensembl GO_REF:0000107 NCBI chr14:76,371,271...76,501,839
Ensembl chr14:76,310,712...76,501,837
JBrowse link
G GAPDHS glyceraldehyde-3-phosphate dehydrogenase, spermatogenic TAS (PMID:10714828) UniProtKB PMID:10714828 NCBI chr19:35,533,456...35,545,319
Ensembl chr19:35,533,455...35,545,319
JBrowse link
G GCK glucokinase ISO RGD PMID:17553851 RGD:2301905 NCBI chr 7:44,143,213...44,189,439
Ensembl chr 7:44,143,213...44,198,170
JBrowse link
G GPD1 glycerol-3-phosphate dehydrogenase 1 IEA Ensembl GO_REF:0000107 NCBI chr12:50,104,008...50,111,313
Ensembl chr12:50,103,982...50,111,313
JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha IC (PMID:8089148) BHF-UCL PMID:8089148 NCBI chr14:61,695,513...61,748,259
Ensembl chr14:61,695,513...61,748,259
JBrowse link
G HTR2A 5-hydroxytryptamine receptor 2A IEA Ensembl GO_REF:0000107 NCBI chr13:46,831,546...46,898,082
Ensembl chr13:46,831,550...46,897,076
JBrowse link
G IFNG interferon gamma ISS ARUK-UCL GO_REF:0000024 NCBI chr12:68,154,768...68,159,740
Ensembl chr12:68,154,768...68,159,740
JBrowse link
G IGF1 insulin like growth factor 1 IDA (PMID:7688386) BHF-UCL PMID:7688386 NCBI chr12:102,395,860...102,481,839
Ensembl chr12:102,395,874...102,481,744
JBrowse link
G INS insulin IMP
IDA
(PMID:381941)
(PMID:7688386)
BHF-UCL PMID:381941, PMID:7688386 NCBI chr11:2,159,779...2,161,209
Ensembl chr11:2,159,779...2,161,341
Ensembl chr11:2,159,779...2,161,341
JBrowse link
G INSR insulin receptor IMP (PMID:7693131) BHF-UCL PMID:7693131 NCBI chr19:7,112,257...7,294,414
Ensembl chr19:7,112,255...7,294,414
JBrowse link
G MIF macrophage migration inhibitory factor ISO RGD PMID:11086030 RGD:1642010 NCBI chr22:23,894,383...23,895,223
Ensembl chr22:23,894,383...23,895,227
JBrowse link
G MLXIPL MLX interacting protein like IMP (PMID:19995986) BHF-UCL PMID:19995986 NCBI chr 7:73,593,201...73,624,522
Ensembl chr 7:73,593,194...73,624,543
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor IEA Ensembl GO_REF:0000107 NCBI chr 8:127,735,434...127,742,951
Ensembl chr 8:127,735,434...127,742,951
JBrowse link
G P2RX7 purinergic receptor P2X 7 IMP (PMID:22898868) CACAO PMID:22898868 NCBI chr12:121,132,819...121,188,032
Ensembl chr12:121,132,819...121,188,032
JBrowse link
G PFKFB1 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 TAS Reactome Reactome:R-HSA-71802 NCBI chr  X:54,932,961...55,000,052
Ensembl chr  X:54,932,961...54,998,534
JBrowse link
G PFKFB2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 TAS Reactome Reactome:R-HSA-71802 NCBI chr 1:207,053,063...207,081,027
Ensembl chr 1:207,034,366...207,081,024
JBrowse link
G PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 TAS Reactome Reactome:R-HSA-71802 NCBI chr10:6,144,918...6,254,648
Ensembl chr10:6,144,934...6,254,644
JBrowse link
G PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 TAS Reactome Reactome:R-HSA-71802 NCBI chr 3:48,517,684...48,562,383
Ensembl chr 3:48,517,684...48,562,015
JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 ISS UniProtKB GO_REF:0000024 NCBI chr 5:40,759,379...40,798,195
Ensembl chr 5:40,759,379...40,798,374
JBrowse link
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 ISS UniProtKB GO_REF:0000024 NCBI chr 1:56,645,314...56,715,335
Ensembl chr 1:56,645,314...56,715,335
JBrowse link
G PRXL2C peroxiredoxin like 2C IMP (PMID:29901208) UniProt PMID:29901208 NCBI chr 9:96,639,577...96,655,331
Ensembl chr 9:96,639,577...96,655,317
JBrowse link
G PSEN1 presenilin 1 IGI (PMID:29061364) ARUK-UCL PMID:29061364 NCBI chr14:73,136,436...73,223,691
Ensembl chr14:73,136,418...73,223,691
JBrowse link
G SLC4A4 solute carrier family 4 member 4 IGI
ISS
(PMID:21976511) ARUK-UCL PMID:21976511 NCBI chr 4:71,062,646...71,572,083
Ensembl chr 4:71,062,667...71,572,087
JBrowse link
G ZBTB20 zinc finger and BTB domain containing 20 ISS UniProtKB GO_REF:0000024 NCBI chr 3:114,314,500...115,147,288
Ensembl chr 3:114,314,500...115,147,288
Ensembl chr 3:114,314,500...115,147,288
JBrowse link
positive regulation of guanylate cyclase activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADORA2B adenosine A2b receptor IEA Ensembl GO_REF:0000107 NCBI chr17:15,927,782...15,975,896
Ensembl chr17:15,944,917...15,975,746
JBrowse link
G GUCA1A guanylate cyclase activator 1A ISS
IEA
UniProt
GOC
GO_REF:0000024, GO_REF:0000108 NCBI chr 6:42,173,364...42,180,056
Ensembl chr 6:42,155,406...42,180,049
Ensembl chr 6:42,155,406...42,180,049
JBrowse link
G GUCA1ANB GUCA1A neighbor IEA GOC GO_REF:0000108 NCBI chr 6:42,155,406...42,163,418
Ensembl chr 6:42,155,406...42,163,439
Ensembl chr 6:42,155,406...42,163,439
Ensembl chr 6:42,155,406...42,163,439
Ensembl chr 6:42,155,406...42,163,439
JBrowse link
G GUCA1B guanylate cyclase activator 1B IEA GOC GO_REF:0000108 NCBI chr 6:42,183,284...42,194,956
Ensembl chr 6:42,183,284...42,194,956
JBrowse link
G GUCA1C guanylate cyclase activator 1C IEA GOC GO_REF:0000108 NCBI chr 3:108,907,644...108,955,195
Ensembl chr 3:108,907,792...108,953,879
JBrowse link
G GUCA2A guanylate cyclase activator 2A IEA GOC GO_REF:0000108 NCBI chr 1:42,162,690...42,164,745
Ensembl chr 1:42,162,690...42,164,745
JBrowse link
G GUCA2B guanylate cyclase activator 2B IEA GOC GO_REF:0000108 NCBI chr 1:42,153,410...42,155,820
Ensembl chr 1:42,153,410...42,155,820
JBrowse link
G LOC118142757 GUCA1ANB-GUCA1A readthrough ISS UniProt GO_REF:0000024 NCBI chr 6:42,155,406...42,180,056 JBrowse link
G NOS1 nitric oxide synthase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:117,208,142...117,361,626
Ensembl chr12:117,208,142...117,452,170
JBrowse link
G NOS2 nitric oxide synthase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:27,756,766...27,800,529
Ensembl chr17:27,756,766...27,800,529
JBrowse link
G NOS3 nitric oxide synthase 3 IMP
IBA
ISS
(PMID:17502619)
(PMID:21873635)
BHF-UCL
GO_Central
PMID:17502619, PMID:21873635 GO_REF:0000024 NCBI chr 7:150,991,017...151,014,588
Ensembl chr 7:150,991,017...151,014,588
JBrowse link
G RCVRN recoverin IEA GOC GO_REF:0000108 NCBI chr17:9,896,320...9,905,271
Ensembl chr17:9,896,320...9,905,271
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18670
    metabolic process 12302
      positive regulation of metabolic process 4209
        positive regulation of small molecule metabolic process 178
          positive regulation of nucleotide metabolic process 58
            positive regulation of nucleotide biosynthetic process + 32
            positive regulation of nucleotide catabolic process + 0
            positive regulation of purine nucleotide metabolic process + 58
Path 2
Term Annotations click to browse term
  biological_process 18670
    metabolic process 12302
      cellular metabolic process 11281
        cellular nitrogen compound metabolic process 6773
          nucleobase-containing compound metabolic process 5982
            nucleobase-containing small molecule metabolic process 670
              nucleoside phosphate metabolic process 579
                nucleotide metabolic process 571
                  regulation of nucleotide metabolic process 136
                    positive regulation of nucleotide metabolic process 58
                      positive regulation of nucleotide biosynthetic process + 32
                      positive regulation of nucleotide catabolic process + 0
                      positive regulation of purine nucleotide metabolic process + 58
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.