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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of nucleotide metabolic process
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Accession:GO:0045981 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving nucleotides.
Synonyms:exact_synonym: positive regulation of nucleotide metabolism;   up regulation of nucleotide metabolic process;   upregulation of nucleotide metabolic process
 narrow_synonym: activation of nucleotide metabolic process;   stimulation of nucleotide metabolic process


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positive regulation of ATP biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2L1 BCL2 like 1 ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr24:21,145,214...21,209,425
Ensembl chr24:21,145,215...21,196,355
JBrowse link
G ENO1 enolase 1 ISO (PMID:15459207) CAFA PMID:15459207 NCBI chr 5:62,300,805...62,314,508
Ensembl chr 5:62,300,808...62,304,093
JBrowse link
G IL4 interleukin 4 ISO (MGI:MGI:6304699|PMID:29061364) ARUK-UCL PMID:29061364 MGI:MGI:6304699 NCBI chr11:20,972,693...20,981,539
Ensembl chr11:20,972,690...20,981,534
JBrowse link
G LOC100683370 thymosin beta-4 ISO (PMID:21106936) CAFA PMID:21106936 NCBI chr 1:21,127,694...21,128,346 JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 ISO PMID:15459207 CAFA PMID:15459207 RGD:12793039 NCBI chr30:30,683,192...30,760,479
Ensembl chr30:30,683,107...30,760,479
JBrowse link
G MT-CO2 mitochondrially encoded cytochrome c oxidase II ISO RGD PMID:19306371 RGD:13506652 NCBI chr MT:7,034...7,717
Ensembl chr MT:7,034...7,717
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:22629444 RGD:7240532 NCBI chr13:25,200,772...25,205,309
Ensembl chr13:25,200,577...25,205,309
JBrowse link
G NDUFC2 NADH:ubiquinone oxidoreductase subunit C2 ISO RGD PMID:26888427 RGD:11040458 NCBI chr21:20,748,452...20,758,236 JBrowse link
G PID1 phosphotyrosine interaction domain containing 1 IEA Ensembl GO_REF:0000107 NCBI chr25:41,424,307...41,649,736
Ensembl chr25:41,425,811...41,652,672
JBrowse link
G PPARA peroxisome proliferator activated receptor alpha ISO (PMID:31574452) ARUK-UCL PMID:31574452 NCBI chr10:19,934,020...20,006,096
Ensembl chr10:19,934,165...20,006,146
JBrowse link
G PPARGC1A PPARG coactivator 1 alpha ISS
IEA
UniProtKB
Ensembl
GO_REF:0000024, GO_REF:0000107 NCBI chr 3:85,645,942...86,284,570
Ensembl chr 3:86,016,140...86,281,269
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase ISO RGD PMID:24096089 RGD:10413842 NCBI chr 1:49,886,887...51,201,930
Ensembl chr 1:49,889,005...51,201,764
JBrowse link
G SIRT1 sirtuin 1 ISO (PMID:24747689) AgBase PMID:24747689 NCBI chr 4:19,188,616...19,220,031
Ensembl chr 4:19,188,675...19,218,279
JBrowse link
G SLC25A12 solute carrier family 25 member 12 ISO RGD PMID:19764902 RGD:13628741 NCBI chr36:16,185,011...16,391,080
Ensembl chr36:16,185,649...16,483,016
JBrowse link
G STAT3 signal transducer and activator of transcription 3 ISO RGD PMID:23590160 RGD:8694322 NCBI chr 9:20,539,660...20,614,631
Ensembl chr 9:20,539,697...20,612,672
JBrowse link
G TAZ tafazzin ISO RGD PMID:20348225 RGD:13432160 NCBI chr  X:122,111,608...122,125,714
Ensembl chr  X:122,111,434...122,125,506
JBrowse link
G VCP valosin containing protein IEA Ensembl GO_REF:0000107 NCBI chr11:51,636,986...51,651,749
Ensembl chr11:51,637,411...51,651,714
JBrowse link
positive regulation of glycolytic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APP amyloid beta precursor protein IEA Ensembl GO_REF:0000107 NCBI chr31:21,351,207...21,614,466
Ensembl chr31:21,351,207...21,614,337
JBrowse link
G ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 (inactive) ISO (MGI:MGI:4881347|PMID:21074248) UniProtKB PMID:21074248 MGI:MGI:4881347 NCBI chr 8:47,193,463...47,245,865
Ensembl chr 8:47,196,439...47,229,964
JBrowse link
G ESRRB estrogen related receptor beta ISO PMID:24481529 BHF-UCL PMID:24481529 RGD:12910990 NCBI chr 8:49,253,877...49,424,148
Ensembl chr 8:49,253,332...49,421,332
JBrowse link
G GCK glucokinase ISO RGD PMID:17553851 RGD:2301905
G GPD1 glycerol-3-phosphate dehydrogenase 1 IEA Ensembl GO_REF:0000107 NCBI chr27:4,614,878...4,622,013
Ensembl chr27:4,614,864...4,621,922
JBrowse link
G HTR2A 5-hydroxytryptamine receptor 2A IEA Ensembl GO_REF:0000107 NCBI chr22:4,453,715...4,510,934
Ensembl chr22:4,453,715...4,511,037
JBrowse link
G IFNG interferon gamma ISO (MGI:MGI:6304699|PMID:29061364) ARUK-UCL PMID:29061364 MGI:MGI:6304699 NCBI chr10:10,406,866...10,411,698
Ensembl chr10:10,406,867...10,411,698
JBrowse link
G IGF1 insulin like growth factor 1 IEA Ensembl GO_REF:0000107 NCBI chr15:41,203,320...41,275,964
Ensembl chr15:41,202,518...41,275,794
JBrowse link
G INS insulin ISO (PMID:381941)
(PMID:7688386)
BHF-UCL PMID:381941, PMID:7688386 NCBI chr18:46,324,047...46,324,933
Ensembl chr18:46,324,041...46,325,122
JBrowse link
G INSR insulin receptor IEA Ensembl GO_REF:0000107 NCBI chr20:52,017,261...52,136,061
Ensembl chr20:52,021,887...52,136,046
JBrowse link
G MLXIPL MLX interacting protein like IEA Ensembl GO_REF:0000107 NCBI chr 6:6,617,398...6,652,201
Ensembl chr 6:6,633,231...6,652,198
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:22842522 RGD:7207891 NCBI chr13:25,200,772...25,205,309
Ensembl chr13:25,200,577...25,205,309
JBrowse link
G P2RX7 purinergic receptor P2X 7 IEA Ensembl GO_REF:0000107 NCBI chr26:7,928,863...7,983,956
Ensembl chr26:7,940,985...7,983,740
JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 ISO PMID:11069105 UniProt PMID:11069105 RGD:8554193 NCBI chr 4:68,579,061...68,614,548
Ensembl chr 4:68,579,037...68,611,841
JBrowse link
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 ISO PMID:11069105 UniProt PMID:11069105 RGD:8554193 NCBI chr 5:52,809,792...52,855,072
Ensembl chr 5:52,815,609...52,876,609
JBrowse link
G PRXL2C peroxiredoxin like 2C IEA Ensembl GO_REF:0000107 NCBI chr 1:70,199,278...70,209,026
Ensembl chr 1:70,199,357...70,208,534
JBrowse link
G PSEN1 presenilin 1 IEA Ensembl GO_REF:0000107 NCBI chr 8:46,495,551...46,569,532
Ensembl chr 8:46,495,624...46,569,532
JBrowse link
G SLC4A4 solute carrier family 4 member 4 IEA Ensembl GO_REF:0000107 NCBI chr13:60,375,215...60,670,664
Ensembl chr13:60,328,136...60,666,728
JBrowse link
G ZBTB20 zinc finger and BTB domain containing 20 IEA Ensembl GO_REF:0000107 NCBI chr33:18,860,824...19,277,691
Ensembl chr33:18,529,132...18,759,058
JBrowse link
positive regulation of guanylate cyclase activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADORA2B adenosine A2b receptor ISO (MGI:MGI:3794903|PMID:18340377) MGI PMID:18340377 MGI:MGI:3794903 NCBI chr 5:39,884,375...39,908,214 JBrowse link
G GUCA1A guanylate cyclase activator 1A IEA GOC GO_REF:0000108 NCBI chr12:10,786,284...10,795,974
Ensembl chr12:10,788,424...10,795,442
JBrowse link
G GUCA1B guanylate cyclase activator 1B IEA GOC GO_REF:0000108 NCBI chr12:10,796,961...10,806,796
Ensembl chr12:10,797,921...10,834,237
JBrowse link
G GUCA1C guanylate cyclase activator 1C IEA GOC GO_REF:0000108 NCBI chr33:14,106,331...14,141,368
Ensembl chr33:14,106,814...14,141,062
JBrowse link
G GUCA2A guanylate cyclase activator 2A IEA GOC GO_REF:0000108 NCBI chr15:1,090,109...1,091,277
Ensembl chr15:1,090,109...1,091,375
JBrowse link
G GUCA2B guanylate cyclase activator 2B IEA GOC GO_REF:0000108 NCBI chr15:1,094,283...1,096,605
Ensembl chr15:1,094,276...1,096,688
JBrowse link
G NOS1 nitric oxide synthase 1 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr26:13,787,341...13,895,176
Ensembl chr26:13,786,309...13,962,332
JBrowse link
G NOS2 nitric oxide synthase 2 IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:42,171,821...42,210,217
Ensembl chr 9:42,171,821...42,208,588
JBrowse link
G NOS3 nitric oxide synthase 3 IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr16:15,054,196...15,072,454
Ensembl chr16:15,011,344...15,072,277
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16187
    metabolic process 10657
      positive regulation of metabolic process 3816
        positive regulation of small molecule metabolic process 158
          positive regulation of nucleotide metabolic process 44
            positive regulation of nucleotide biosynthetic process + 26
            positive regulation of nucleotide catabolic process + 0
            positive regulation of purine nucleotide metabolic process + 44
Path 2
Term Annotations click to browse term
  biological_process 16187
    metabolic process 10657
      cellular metabolic process 9648
        cellular nitrogen compound metabolic process 5712
          nucleobase-containing compound metabolic process 4916
            nucleobase-containing small molecule metabolic process 540
              nucleoside phosphate metabolic process 464
                nucleotide metabolic process 457
                  regulation of nucleotide metabolic process 85
                    positive regulation of nucleotide metabolic process 44
                      positive regulation of nucleotide biosynthetic process + 26
                      positive regulation of nucleotide catabolic process + 0
                      positive regulation of purine nucleotide metabolic process + 44
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.