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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of nucleotide metabolic process
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Accession:GO:0045981 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving nucleotides.
Synonyms:exact_synonym: positive regulation of nucleotide metabolism;   up regulation of nucleotide metabolic process;   upregulation of nucleotide metabolic process
 narrow_synonym: activation of nucleotide metabolic process;   stimulation of nucleotide metabolic process


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positive regulation of ATP biosynthetic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2L1 BCL2 like 1 ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chr20:27,955,688...28,015,950
Ensembl chr20:29,088,055...29,146,585
JBrowse link
G ENO1 enolase 1 ISO (PMID:15459207) CAFA PMID:15459207 NCBI chr 1:7,619,490...7,637,558 JBrowse link
G IL4 interleukin 4 ISO (MGI:MGI:6304699|PMID:29061364) ARUK-UCL PMID:29061364 MGI:MGI:6304699 NCBI chr 5:128,091,342...128,099,886
Ensembl chr 5:134,253,039...134,261,581
JBrowse link
G MAP2K1 mitogen-activated protein kinase kinase 1 ISO PMID:15459207 CAFA PMID:15459207 RGD:12793039 NCBI chr15:45,337,117...45,438,826
Ensembl chr15:63,613,961...63,714,161
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:22629444 RGD:7240532 NCBI chr 8:124,387,561...124,393,551
Ensembl chr 8:127,131,512...127,136,863
JBrowse link
G NDUFC2 NADH:ubiquinone oxidoreductase subunit C2 ISO RGD PMID:26888427 RGD:11040458 NCBI chr11:73,128,457...73,140,344
Ensembl chr11:76,720,094...76,763,098
JBrowse link
G PID1 phosphotyrosine interaction domain containing 1 ISO (MGI:MGI:5306739|PMID:21080215) BHF-UCL PMID:21080215 MGI:MGI:5306739 NCBI chr2B:116,265,529...116,517,557 JBrowse link
G PPARA peroxisome proliferator activated receptor alpha ISO (PMID:31574452) ARUK-UCL PMID:31574452 Ensembl chr22:45,218,364...45,302,970 JBrowse link
G PPARGC1A PPARG coactivator 1 alpha ISO (MGI:MGI:5463828|PMID:23150719) UniProtKB PMID:23150719 MGI:MGI:5463828 NCBI chr 4:18,196,431...18,876,889
Ensembl chr 4:23,483,377...23,581,212
JBrowse link
G PRKN parkin RBR E3 ubiquitin protein ligase ISO RGD PMID:24096089 RGD:10413842 NCBI chr 6:159,293,016...160,679,106
Ensembl chr 6:164,314,990...165,678,770
JBrowse link
G SIRT1 sirtuin 1 ISO (PMID:24747689) AgBase PMID:24747689 NCBI chr10:64,368,878...64,401,684
Ensembl chr10:66,681,598...66,715,069
JBrowse link
G SLC25A12 solute carrier family 25 member 12 ISO RGD PMID:19764902 RGD:13628741 NCBI chr2B:59,071,123...59,297,327
Ensembl chr2B:176,532,940...176,641,894
JBrowse link
G STAT3 signal transducer and activator of transcription 3 ISO RGD PMID:23590160 RGD:8694322 NCBI chr17:14,928,689...15,003,644
Ensembl chr17:15,152,358...15,227,067
JBrowse link
G TAZ tafazzin ISO RGD PMID:20348225 RGD:13432160 NCBI chr  X:143,853,054...143,863,491
Ensembl chr  X:153,725,294...153,734,046
JBrowse link
G TMSB4X thymosin beta 4 X-linked ISO (PMID:21106936) CAFA PMID:21106936 NCBI chr  X:5,587,242...5,589,417 JBrowse link
G TREM2 triggering receptor expressed on myeloid cells 2 ISO (MGI:MGI:5906931|PMID:28802038) ARUK-UCL PMID:28802038 MGI:MGI:5906931 NCBI chr 6:40,735,483...40,740,208
Ensembl chr 6:42,043,900...42,048,578
JBrowse link
G VCP valosin containing protein ISO (PMID:23498975) ParkinsonsUK-UCL PMID:23498975 NCBI chr 9:34,907,147...34,923,227
Ensembl chr 9:35,712,937...35,729,588
JBrowse link
positive regulation of glycolytic process term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APP amyloid beta precursor protein ISO (PMID:29061364) ARUK-UCL PMID:29061364 NCBI chr21:12,324,455...12,608,594
Ensembl chr21:25,684,355...25,995,072
JBrowse link
G ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 (inactive) ISO (MGI:MGI:4881347|PMID:21074248) UniProtKB PMID:21074248 MGI:MGI:4881347 NCBI chr14:54,522,428...54,578,501
Ensembl chr14:73,376,684...73,410,468
JBrowse link
G ESRRB estrogen related receptor beta ISO PMID:24481529 BHF-UCL PMID:24481529 RGD:12910990 NCBI chr14:56,868,361...57,060,552
Ensembl chr14:75,839,333...76,266,895
JBrowse link
G GCK glucokinase ISO RGD PMID:17553851 RGD:2301905 NCBI chr 7:44,857,604...44,903,683
Ensembl chr 7:44,926,848...44,937,751
JBrowse link
G GPD1 glycerol-3-phosphate dehydrogenase 1 ISO (MGI:MGI:1927687|PMID:11147825) MGI PMID:11147825 MGI:MGI:1927687 NCBI chr12:38,644,466...38,651,924
Ensembl chr12:39,541,550...39,549,040
JBrowse link
G HTR2A 5-hydroxytryptamine receptor 2A ISO (MGI:MGI:3766710|PMID:17408640) MGI PMID:17408640 MGI:MGI:3766710 NCBI chr13:27,976,415...28,042,941
Ensembl chr13:46,694,273...46,759,826
JBrowse link
G IFNG interferon gamma ISO (MGI:MGI:6304699|PMID:29061364) ARUK-UCL PMID:29061364 MGI:MGI:6304699 NCBI chr12:65,663,764...65,668,732
Ensembl chr12:68,448,861...68,453,829
JBrowse link
G IGF1 insulin like growth factor 1 ISO (PMID:7688386) BHF-UCL PMID:7688386 NCBI chr12:99,986,887...100,066,773 JBrowse link
G INS insulin ISO (PMID:7688386)
(PMID:381941)
BHF-UCL PMID:381941, PMID:7688386 NCBI chr11:2,200,785...2,202,579
Ensembl chr11:2,218,117...2,231,666
JBrowse link
G INSR insulin receptor ISO (PMID:7693131) BHF-UCL PMID:7693131 NCBI chr19:6,393,407...6,578,234
Ensembl chr19:7,260,246...7,414,889
JBrowse link
G MIF macrophage migration inhibitory factor ISO RGD PMID:11086030 RGD:1642010 NCBI chr22:4,646,986...4,647,831
Ensembl chr22:22,730,807...22,732,009
JBrowse link
G MLXIPL MLX interacting protein like ISO (PMID:19995986)
(MGI:MGI:3041761|PMID:15118080)
BHF-UCL PMID:15118080, PMID:19995986 MGI:MGI:3041761 Ensembl chr 7:80,745,765...80,776,153 JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:22842522 RGD:7207891 NCBI chr 8:124,387,561...124,393,551
Ensembl chr 8:127,131,512...127,136,863
JBrowse link
G P2RX7 purinergic receptor P2X 7 ISO (PMID:22898868) CACAO PMID:22898868 NCBI chr12:118,731,761...118,786,039
Ensembl chr12:122,102,888...122,154,068
JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 ISO PMID:11069105 UniProt PMID:11069105 RGD:8554193 NCBI chr 5:69,581,748...69,620,721
Ensembl chr 5:74,627,830...74,666,505
JBrowse link
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 ISO PMID:11069105 UniProt PMID:11069105 RGD:8554193 NCBI chr 1:55,928,577...55,998,628
Ensembl chr 1:57,664,237...57,702,227
JBrowse link
G PRXL2C peroxiredoxin like 2C ISO (PMID:29901208) UniProt PMID:29901208 NCBI chr 9:67,737,639...67,751,691 JBrowse link
G PSEN1 presenilin 1 ISO (PMID:29061364) ARUK-UCL PMID:29061364 NCBI chr14:53,718,299...53,802,684
Ensembl chr14:72,579,024...72,663,876
JBrowse link
G SLC4A4 solute carrier family 4 member 4 ISO (MGI:MGI:5295108|PMID:21976511)
(PMID:21976511)
ARUK-UCL PMID:21976511 MGI:MGI:5295108 NCBI chr 4:52,659,221...52,994,053
Ensembl chr 4:59,002,200...59,385,608
JBrowse link
G ZBTB20 zinc finger and BTB domain containing 20 ISO (MGI:MGI:5913553|PMID:28327662) UniProtKB PMID:28327662 MGI:MGI:5913553 NCBI chr 3:111,445,520...112,275,946
Ensembl chr 3:118,389,250...118,431,453
JBrowse link
positive regulation of guanylate cyclase activity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADORA2B adenosine A2b receptor ISO (MGI:MGI:3794903|PMID:18340377) MGI PMID:18340377 MGI:MGI:3794903 NCBI chr17:34,849,466...34,880,088 JBrowse link
G GUCA1A guanylate cyclase activator 1A ISO RGD PMID:12545196 RGD:1599357 NCBI chr 6:41,693,593...41,774,591 JBrowse link
G NOS3 nitric oxide synthase 3 ISO (PMID:17502619) BHF-UCL PMID:17502619 NCBI chr 7:142,577,334...142,600,702
Ensembl chr 7:154,730,009...154,755,233
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12564
    metabolic process 7979
      positive regulation of metabolic process 3445
        positive regulation of small molecule metabolic process 152
          positive regulation of nucleotide metabolic process 39
            positive regulation of nucleotide biosynthetic process + 20
            positive regulation of nucleotide catabolic process + 0
            positive regulation of purine nucleotide metabolic process + 39
Path 2
Term Annotations click to browse term
  biological_process 12564
    metabolic process 7979
      cellular metabolic process 7331
        cellular nitrogen compound metabolic process 4233
          nucleobase-containing compound metabolic process 3701
            nucleobase-containing small molecule metabolic process 376
              nucleoside phosphate metabolic process 326
                nucleotide metabolic process 316
                  regulation of nucleotide metabolic process 80
                    positive regulation of nucleotide metabolic process 39
                      positive regulation of nucleotide biosynthetic process + 20
                      positive regulation of nucleotide catabolic process + 0
                      positive regulation of purine nucleotide metabolic process + 39
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.