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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of transcription by RNA polymerase I
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Accession:GO:0045943 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of transcription mediated by RNA polymerase I.
Synonyms:exact_synonym: positive regulation of transcription from Pol I promoter;   positive regulation of transcription from RNA polymerase I promoter;   up regulation of transcription from RNA polymerase I promoter;   upregulation of transcription from RNA polymerase I promoter
 narrow_synonym: activation of transcription from RNA polymerase I promoter;   stimulation of transcription from RNA polymerase I promoter



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positive regulation of transcription by RNA polymerase I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf4 activating transcription factor 4 involved_in ISO (PMID:22915762) RGD PMID:22915762 NCBI chr 7:113,684,681...113,686,739
Ensembl chr 7:111,804,183...111,806,446
JBrowse link
G Bnc1 basonuclin zinc finger protein 1 involved_in ISO (PMID:11152639) RGD PMID:11152639 NCBI chr 1:145,326,881...145,352,534
Ensembl chr 1:135,917,687...135,943,333
JBrowse link
G Carm1 coactivator-associated arginine methyltransferase 1 involved_in ISO (PMID:15471871) RGD PMID:15471871 NCBI chr 8:20,097,262...20,141,950
Ensembl chr 8:20,097,254...20,147,689
JBrowse link
G Dhx33 DEAH-box helicase 33 involved_in ISO
IBA
(PMID:21930779)
GO_REF:0000033
RGD
GO_Central
PMID:21930779 GO_REF:0000033 NCBI chr10:56,206,680...56,223,189
Ensembl chr10:55,705,756...55,724,567
JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 involved_in ISO (PMID:22915762) RGD PMID:22915762 NCBI chr 4:104,363,838...104,425,271
Ensembl chr 4:102,805,510...102,866,911
JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 involved_in ISO
ISS
IEA
(PMID:21555369)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:21555369 GO_REF:0000024 GO_REF:0000107 NCBI chr10:83,907,491...83,931,365
Ensembl chr10:83,411,313...83,435,078
JBrowse link
G Heatr1 HEAT repeat containing 1 involved_in ISO
IBA
(PMID:17699751)
GO_REF:0000033
RGD
GO_Central
PMID:17699751 GO_REF:0000033 NCBI chr17:62,745,008...62,785,609
Ensembl chr17:58,051,700...58,093,948
JBrowse link
G Lyar Ly1 antibody reactive involved_in IEA
ISO
GO_REF:0000107
(PMID:31504794)
Ensembl
RGD
PMID:31504794 GO_REF:0000107 NCBI chr14:76,789,193...76,802,973
Ensembl chr14:72,576,879...72,590,612
JBrowse link
G Phf8 PHD finger protein 8 involved_in ISO (PMID:20208542) RGD PMID:20208542 NCBI chr  X:20,524,103...20,623,459
Ensembl chr  X:20,524,558...20,623,410
JBrowse link
G Ppp1r15a protein phosphatase 1, regulatory subunit 15A involved_in ISO (PMID:14635196) RGD PMID:14635196 NCBI chr 1:105,136,521...105,139,596
Ensembl chr 1:96,000,058...96,003,171
JBrowse link
G Rasl11a RAS-like family 11 member A involved_in ISS
ISO
GO_REF:0000024
(PMID:20168301)
UniProt
RGD
PMID:20168301 GO_REF:0000024 NCBI chr12:13,372,023...13,374,784
Ensembl chr12:8,258,159...8,262,576
JBrowse link
G Sirt7 sirtuin 7 involved_in ISS
ISO
GO_REF:0000024
(PMID:30540930)
UniProt
RGD
PMID:30540930 GO_REF:0000024 NCBI chr10:106,394,802...106,401,627
Ensembl chr10:105,896,476...105,903,172
JBrowse link
G Ubtf upstream binding transcription factor involved_in ISS
IBA
ISO
GO_REF:0000024
GO_REF:0000033
(PMID:20168301)
UniProt
GO_Central
RGD
PMID:20168301 GO_REF:0000024 GO_REF:0000033 NCBI chr10:87,758,346...87,775,377
Ensembl chr10:87,258,217...87,272,969
JBrowse link
G Ubtfl2 upstream binding transcription factor like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:16,073,983...16,075,170
Ensembl chr 8:16,073,983...16,075,170
JBrowse link
G Utp15 UTP15, small subunit processome component involved_in ISO
IBA
(PMID:17699751)
GO_REF:0000033
RGD
GO_Central
PMID:17699751 GO_REF:0000033 NCBI chr 2:31,329,222...31,347,022
Ensembl chr 2:29,594,941...29,612,773
JBrowse link
G Wdr43 WD repeat domain 43 involved_in ISO (PMID:17699751) RGD PMID:17699751 NCBI chr 6:29,565,610...29,604,954
Ensembl chr 6:23,845,499...23,884,846
JBrowse link
G Wdr75 WD repeat domain 75 involved_in ISO
IBA
(PMID:17699751)
GO_REF:0000033
RGD
GO_Central
PMID:17699751 GO_REF:0000033 NCBI chr 9:55,395,232...55,425,412
Ensembl chr 9:47,903,200...47,933,399
JBrowse link
positive regulation of transcription of nucleolar large rRNA by RNA polymerase I term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx11 DEAD/H-box helicase 11 involved_in ISO (PMID:26089203) RGD PMID:26089203 NCBI chr 9:113,204,886...113,309,692
Ensembl chr 9:105,833,504...105,862,550
JBrowse link
G Ippk inositol-pentakisphosphate 2-kinase involved_in ISO
IEA
(PMID:23203802)
GO_REF:0000107
RGD
Ensembl
PMID:23203802 GO_REF:0000107 NCBI chr17:15,396,691...15,441,648
Ensembl chr17:15,190,265...15,229,541
JBrowse link
G Mars1 methionyl-tRNA synthetase 1 involved_in ISO (PMID:10791971) RGD PMID:10791971 NCBI chr 7:65,006,456...65,023,880
Ensembl chr 7:63,121,142...63,138,495
JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISO
IEA
(PMID:24036451)
GO_REF:0000107
RGD
Ensembl
PMID:24036451 GO_REF:0000107 NCBI chr 5:164,167,985...164,277,438
Ensembl chr 5:158,884,804...158,994,311
JBrowse link
G Ncl nucleolin involved_in ISO
IEA
(PMID:24071584)
GO_REF:0000107
RGD
Ensembl
PMID:24071584 GO_REF:0000107 NCBI chr 9:94,447,559...94,456,083
Ensembl chr 9:86,998,019...87,008,136
JBrowse link
G Nol11 nucleolar protein 11 involved_in ISO (PMID:22916032) RGD PMID:22916032 NCBI chr10:92,621,482...92,641,394
Ensembl chr10:92,121,833...92,141,677
JBrowse link
G Pih1d1 PIH1 domain containing 1 involved_in ISO UniProtKB:P42345|UniProtKB:Q12824 (PMID:22368283), (PMID:24036451) RGD PMID:22368283 PMID:24036451 NCBI chr 1:104,774,562...104,781,757
Ensembl chr 1:95,639,592...95,645,290
JBrowse link
G Pwp1 PWP1 homolog, endonuclein involved_in ISO (PMID:29065309) RGD PMID:29065309 NCBI chr 7:19,870,465...19,886,463
Ensembl chr 7:17,982,235...17,998,731
JBrowse link
G Smarca4 SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4 involved_in ISO
IEA
(PMID:22368283)
GO_REF:0000107
RGD
Ensembl
PMID:22368283 GO_REF:0000107 NCBI chr 8:28,438,370...28,535,071
Ensembl chr 8:20,167,717...20,258,975
JBrowse link
G Smarcb1 SWI/SNF related BAF chromatin remodeling complex subunit B1 involved_in ISO UniProtKB:Q9NWS0 (PMID:22368283) RGD PMID:22368283 NCBI chr20:12,740,105...12,763,054
Ensembl chr20:12,741,477...12,763,620
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20553
    cellular process 19543
      metabolic process 12181
        biosynthetic process 8648
          macromolecule biosynthetic process 7672
            gene expression 7233
              DNA-templated transcription 3627
                transcription by RNA polymerase I 75
                  positive regulation of transcription by RNA polymerase I 27
                    positive regulation of termination of RNA polymerase I transcription 0
                    positive regulation of transcription elongation by RNA polymerase I 0
                    positive regulation of transcription of nucleolar large rRNA by RNA polymerase I 10
Path 2
Term Annotations click to browse term
  biological_process 20553
    cellular process 19543
      metabolic process 12181
        primary metabolic process 10757
          nucleobase-containing compound metabolic process 5951
            nucleic acid metabolic process 5334
              RNA metabolic process 4751
                RNA biosynthetic process 4467
                  DNA-templated transcription 3627
                    regulation of DNA-templated transcription 3471
                      regulation of transcription by RNA polymerase I 38
                        positive regulation of transcription by RNA polymerase I 27
                          positive regulation of termination of RNA polymerase I transcription 0
                          positive regulation of transcription elongation by RNA polymerase I 0
                          positive regulation of transcription of nucleolar large rRNA by RNA polymerase I 10
paths to the root