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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of nucleobase-containing compound metabolic process
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Accession:GO:0045935 term browser browse the term
Definition:Any cellular process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving nucleobases, nucleosides, nucleotides and nucleic acids.
Synonyms:exact_synonym: positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolism;   up regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;   upregulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
 narrow_synonym: activation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;   stimulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
 related_synonym: positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process


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3'-UTR-mediated mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO (PMID:21336257) UniProt PMID:21336257 NCBI chrNW_004936601:2,470,021...2,616,451 JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in ISO (PMID:26489465) UniProt PMID:26489465 NCBI chrNW_004936519:1,946,684...1,987,036 JBrowse link
G Dnd1 DND microRNA-mediated repression inhibitor 1 involved_in ISO (PMID:28297718) CACAO PMID:28297718 NCBI chrNW_004936531:9,607,678...9,610,245 JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D ISO RGD PMID:20805360 RGD:10042974 NCBI chrNW_004936738:2,096,370...2,115,135 JBrowse link
G LOC101960021 KH-type splicing regulatory protein involved_in ISO (PMID:16126846)
(PMID:28275056)
UniProt
CACAO
PMID:16126846 PMID:28275056 NCBI chrNW_004936588:3,764,401...3,774,492 JBrowse link
G LOC101975729 TAR DNA binding protein involved_in ISO (PMID:28335005) CACAO PMID:28335005 NCBI chrNW_004936474:90,813...103,713 JBrowse link
G Mov10 Mov10 RISC complex RNA helicase involved_in ISO (PMID:24726324) UniProt PMID:24726324 NCBI chrNW_004936690:1,229,249...1,254,754 JBrowse link
G Plekhn1 pleckstrin homology domain containing N1 involved_in ISO (PMID:29180010)
(MGI:6105829|PMID:27616329)
UniProt PMID:27616329 PMID:29180010 MGI:6105829 NCBI chrNW_004936737:2,072,857...2,079,855 JBrowse link
G Qki QKI, KH domain containing RNA binding acts_upstream_of_or_within ISO (MGI:5316962|PMID:20631256) MGI PMID:20631256 MGI:5316962 NCBI chrNW_004936489:13,901,066...14,000,652 JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO (PMID:24375645) UniProt PMID:24375645 NCBI chrNW_004936552:3,291,727...3,304,332 JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 involved_in ISO (MGI:5706859|PMID:26000482), (MGI:5751631|PMID:26255671) UniProt PMID:26000482 PMID:26255671 MGI:5706859 MGI:5751631 NCBI chrNW_004936481:13,919,006...13,973,868 JBrowse link
G Trim71 tripartite motif containing 71 involved_in ISO (PMID:23125361) CACAO PMID:23125361 NCBI chrNW_004936473:23,223,984...23,290,177 JBrowse link
G Upf1 UPF1 RNA helicase and ATPase involved_in ISO (PMID:26255671)
(PMID:24726324)
UniProt PMID:24726324 PMID:26255671 NCBI chrNW_004936596:2,469,444...2,505,688 JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A involved_in ISO (PMID:19909337)
(MGI:3842851|PMID:19322177), (MGI:5706859|PMID:26000482), (MGI:5706909|PMID:23185455), (MGI:5707103|PMID:26134560), (MGI:5751631|PMID:26255671)
UniProt PMID:19322177 PMID:19909337 PMID:23185455 PMID:26000482 PMID:26134560 PMID:26255671 MGI:3842851 MGI:5706859 MGI:5706909 MGI:5707103 MGI:5751631 NCBI chrNW_004936474:19,714,145...19,722,512 JBrowse link
G Zc3h12d zinc finger CCCH-type containing 12D involved_in ISO (MGI:5707103|PMID:26134560) UniProt PMID:26134560 MGI:5707103 NCBI chrNW_004936489:2,454,889...2,472,392 JBrowse link
G Zfp36 ZFP36 ring finger protein involved_in ISO (PMID:14679154), (PMID:15187101), (PMID:15634918), (PMID:15766526)
(MGI:5795824|PMID:17288565)
(MGI:5784976|PMID:22701344), (MGI:5788345|PMID:27193233)
(PMID:11719186), (PMID:15687258), (PMID:20221403), (PMID:27193233), (PMID:9703499)
UniProt PMID:9703499 PMID:11719186 PMID:14679154 PMID:15187101 PMID:15634918 PMID:15687258 PMID:15766526 PMID:17288565 PMID:20221403 PMID:22701344 PMID:27193233 MGI:5784976 MGI:5788345 MGI:5795824 NCBI chrNW_004936661:2,251,148...2,253,527 JBrowse link
G Zfp36l1 ZFP36 ring finger protein like 1 involved_in ISO (PMID:15467755), (PMID:15538381), (PMID:15687258), (PMID:18326031), (PMID:19179481), (PMID:24700863), (PMID:26542173)
(MGI:4818820|PMID:20622884), (MGI:5784967|PMID:24733888), (MGI:5784976|PMID:22701344)
(MGI:5779430|PMID:27102483), (MGI:5784968|PMID:24700863)
(PMID:12198173), (PMID:25014217), (PMID:25106868)
UniProt PMID:12198173 PMID:15467755 PMID:15538381 PMID:15687258 PMID:18326031 PMID:19179481 PMID:20622884 PMID:22701344 PMID:24700863 PMID:24733888 PMID:25014217 PMID:25106868 PMID:26542173 PMID:27102483 MGI:4818820 MGI:5779430 MGI:5784967 MGI:5784968 MGI:5784976 NCBI chrNW_004936495:12,045,679...12,050,737 JBrowse link
G Zfp36l2 ZFP36 ring finger protein like 2 involved_in ISO (PMID:25106868)
(MGI:4818820|PMID:20622884), (MGI:5784976|PMID:22701344)
UniProt PMID:20622884 PMID:22701344 PMID:25106868 MGI:4818820 MGI:5784976 NCBI chrNW_004936508:8,617,185...8,620,823 JBrowse link
chromatin-mediated maintenance of transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chek1 checkpoint kinase 1 involved_in ISO (MGI:5294291|PMID:18243098) UniProt PMID:18243098 MGI:5294291 NCBI chrNW_004936743:2,004,535...2,027,287 JBrowse link
G Nr3c1 nuclear receptor subfamily 3 group C member 1 involved_in ISO PMID:12917342 UniProt PMID:12917342 RGD:8553888 NCBI chrNW_004936504:10,960,069...11,056,834 JBrowse link
G Pabpc1l poly(A) binding protein cytoplasmic 1 like acts_upstream_of_or_within ISO (MGI:5688228|PMID:26134869) MGI PMID:26134869 MGI:5688228 NCBI chrNW_004936514:7,809,030...7,831,606 JBrowse link
G Padi2 peptidyl arginine deiminase 2 involved_in ISO (PMID:22853951) UniProt PMID:22853951 NCBI chrNW_004936474:4,033,703...4,066,468 JBrowse link
G Smarcd1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 involved_in ISO (PMID:12917342) UniProt PMID:12917342 NCBI chrNW_004936512:7,747,066...7,759,943 JBrowse link
deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot7 CCR4-NOT transcription complex subunit 7 acts_upstream_of_or_within ISO (MGI:3807625|PMID:18625844) MGI PMID:18625844 MGI:3807625 NCBI chrNW_004936573:6,288,397...6,305,984 JBrowse link
G Noct nocturnin acts_upstream_of_or_within ISO (MGI:3807625|PMID:18625844) MGI PMID:18625844 MGI:3807625 NCBI chrNW_004936535:8,504,518...8,509,376 JBrowse link
G Pan3 poly(A) specific ribonuclease subunit PAN3 acts_upstream_of_or_within ISO (MGI:3807625|PMID:18625844) MGI PMID:18625844 MGI:3807625 NCBI chrNW_004936472:23,297,679...23,434,107 JBrowse link
G Patl1 PAT1 homolog 1, processing body mRNA decay factor involved_in ISO (PMID:20584987), (PMID:20852261) UniProt PMID:20584987 PMID:20852261 NCBI chrNW_004936581:3,075,371...3,100,584 JBrowse link
exonucleolytic catabolism of deadenylated mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot6 CCR4-NOT transcription complex subunit 6 involved_in ISO (PMID:20065043) UniProt PMID:20065043 NCBI chrNW_004936739:308,117...384,600 JBrowse link
G Cnot7 CCR4-NOT transcription complex subunit 7 involved_in ISO (PMID:20065043), (PMID:21336257) UniProt PMID:20065043 PMID:21336257 NCBI chrNW_004936573:6,288,397...6,305,984 JBrowse link
G Cnot8 CCR4-NOT transcription complex subunit 8 involved_in ISO (PMID:20065043) UniProt PMID:20065043 NCBI chrNW_004936515:7,971,504...7,988,257 JBrowse link
G Exosc3 exosome component 3 involved_in ISO (PMID:11782436) UniProt PMID:11782436 NCBI chrNW_004936524:5,580,855...5,586,170 JBrowse link
G Exosc5 exosome component 5 involved_in ISO (PMID:11782436) UniProt PMID:11782436 NCBI chrNW_004936661:3,790,283...3,799,602 JBrowse link
G Exosc9 exosome component 9 involved_in ISO (PMID:11782436) UniProt PMID:11782436 NCBI chrNW_004936662:1,062,461...1,073,425 JBrowse link
mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celf1 CUGBP Elav-like family member 1 involved_in ISO PMID:30508596 ARUK-UCL PMID:30508596 RGD:38501076 NCBI chrNW_004936562:1,699,774...1,785,285 JBrowse link
G Cnot6l CCR4-NOT transcription complex subunit 6 like acts_upstream_of_or_within ISO (MGI:3828348|PMID:17452450) MGI PMID:17452450 MGI:3828348 NCBI chrNW_004936676:1,401,428...1,474,167 JBrowse link
G Fto FTO alpha-ketoglutarate dependent dioxygenase involved_in ISO (PMID:28002401), (PMID:30197295) UniProt PMID:28002401 PMID:30197295 NCBI chrNW_004936475:6,321,725...6,689,410 JBrowse link
G Gigyf2 GRB10 interacting GYF protein 2 involved_in ISO (PMID:27157137) ParkinsonsUK-UCL PMID:27157137 NCBI chrNW_004936525:4,301,003...4,432,125 JBrowse link
G Hnrnpr heterogeneous nuclear ribonucleoprotein R ISO RGD PMID:15798208 RGD:9854643 NCBI chrNW_004936474:8,531,434...8,567,734 JBrowse link
G Mettl14 methyltransferase 14, N6-adenosine-methyltransferase subunit involved_in ISO (MGI:5559905|PMID:24394384), (MGI:5927282|PMID:28965759) UniProt PMID:24394384 PMID:28965759 MGI:5559905 MGI:5927282 NCBI chrNW_004936869:568,324...589,972 JBrowse link
G Mettl16 methyltransferase 16, N6-methyladenosine involved_in ISO (MGI:6114846|PMID:29262316) UniProt PMID:29262316 MGI:6114846 NCBI chrNW_004936538:8,470,057...8,541,620 JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (MGI:5559905|PMID:24394384), (MGI:5621227|PMID:25569111), (MGI:5621254|PMID:25456834), (MGI:5927282|PMID:28965759), (MGI:6094929|PMID:28792938), (MGI:6095345|PMID:28637692) UniProt PMID:24394384 PMID:25456834 PMID:25569111 PMID:28637692 PMID:28792938 PMID:28965759 MGI:5559905 MGI:5621227 MGI:5621254 MGI:5927282 MGI:6094929 MGI:6095345 NCBI chrNW_004936880:646,835...661,312 JBrowse link
G Pum1 pumilio RNA binding family member 1 involved_in ISO (MGI:5640888|PMID:25768905) UniProt PMID:25768905 MGI:5640888 NCBI chrNW_004936474:14,243,325...14,363,461 JBrowse link
G Rbm24 RNA binding motif protein 24 involved_in ISO (PMID:29104163) UniProt PMID:29104163 NCBI chrNW_004936552:3,291,727...3,304,332 JBrowse link
G Rida reactive intermediate imine deaminase A homolog involved_in ISO (PMID:30930054) UniProt PMID:30930054 NCBI chrNW_004936470:44,710,481...44,721,159 JBrowse link
G Rock1 Rho associated coiled-coil containing protein kinase 1 involved_in ISO (MGI:6271078|PMID:29353861) ARUK-UCL PMID:29353861 MGI:6271078 NCBI chrNW_004936550:730,462...874,601 JBrowse link
G Rock2 Rho associated coiled-coil containing protein kinase 2 involved_in ISO (MGI:6271078|PMID:29353861) ARUK-UCL PMID:29353861 MGI:6271078 NCBI chrNW_004936532:7,142,580...7,284,722 JBrowse link
G Ythdf1 YTH N6-methyladenosine RNA binding protein 1 involved_in ISO (PMID:32492408)
(MGI:6490006|PMID:32943573)
UniProt PMID:32492408 PMID:32943573 MGI:6490006 NCBI chrNW_004936514:10,587,877...10,603,373 JBrowse link
G Ythdf2 YTH N6-methyladenosine RNA binding protein 2 involved_in ISO (PMID:27558897), (PMID:30559377), (PMID:30930054), (PMID:32492408)
(MGI:6316439|PMID:29855337), (MGI:6316688|PMID:30065315), (MGI:6317061|PMID:30150673), (MGI:6490006|PMID:32943573), (MGI:6508516|PMID:31959747)
(PMID:28106072), (PMID:32169943)
UniProt PMID:27558897 PMID:28106072 PMID:29855337 PMID:30065315 PMID:30150673 PMID:30559377 PMID:30930054 PMID:31959747 PMID:32169943 PMID:32492408 PMID:32943573 MGI:6316439 MGI:6316688 MGI:6317061 MGI:6490006 MGI:6508516 NCBI chrNW_004936474:12,791,121...12,827,122 JBrowse link
G Ythdf3 YTH N6-methyladenosine RNA binding protein 3 involved_in ISO (PMID:28106072)
(MGI:6490006|PMID:32943573)
(PMID:32492408)
UniProt PMID:28106072 PMID:32492408 PMID:32943573 MGI:6490006 NCBI chrNW_004936496:10,323,338...10,362,150 JBrowse link
negative regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mettl16 methyltransferase 16, N6-methyladenosine involved_in ISO (PMID:28525753) UniProt PMID:28525753 NCBI chrNW_004936538:8,470,057...8,541,620 JBrowse link
negative regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in ISO (PMID:32354837) UniProt PMID:32354837 NCBI chrNW_004936755:586,366...635,294 JBrowse link
negative regulation of nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tent4a terminal nucleotidyltransferase 4A involved_in ISO (PMID:30026317) UniProt PMID:30026317 NCBI chrNW_004936634:667,170...706,901 JBrowse link
G Tent4b terminal nucleotidyltransferase 4B involved_in ISO (PMID:30026317) UniProt PMID:30026317 NCBI chrNW_004936475:3,266,763...3,328,209 JBrowse link
G Tob1 transducer of ERBB2, 1 involved_in ISO (PMID:18377426) UniProt PMID:18377426 NCBI chrNW_004936490:10,876,113...10,880,267 JBrowse link
nuclear polyadenylation-dependent mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO (PMID:16934922) UniProt PMID:16934922 NCBI chrNW_004936491:1,989,429...2,032,430 JBrowse link
nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot6l CCR4-NOT transcription complex subunit 6 like acts_upstream_of_or_within ISO (MGI:3828348|PMID:17452450) MGI PMID:17452450 MGI:3828348 NCBI chrNW_004936676:1,401,428...1,474,167 JBrowse link
G Pde12 phosphodiesterase 12 involved_in ISO (PMID:21245038) UniProt PMID:21245038 NCBI chrNW_004936473:7,894,026...7,897,844 JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 involved_in ISO (MGI:5706859|PMID:26000482), (MGI:5751631|PMID:26255671) UniProt PMID:26000482 PMID:26255671 MGI:5706859 MGI:5751631 NCBI chrNW_004936481:13,919,006...13,973,868 JBrowse link
G Zfp36 ZFP36 ring finger protein involved_in
acts_upstream_of_or_within
ISO (PMID:23644599)
(MGI:3589099|PMID:15814898)
UniProt
MGI
PMID:15814898 PMID:23644599 MGI:3589099 NCBI chrNW_004936661:2,251,148...2,253,527 JBrowse link
G Zfp36l1 ZFP36 ring finger protein like 1 acts_upstream_of_or_within ISO (MGI:3589099|PMID:15814898) MGI PMID:15814898 MGI:3589099 NCBI chrNW_004936495:12,045,679...12,050,737 JBrowse link
G Zfp36l2 ZFP36 ring finger protein like 2 acts_upstream_of_or_within ISO (MGI:3589099|PMID:15814898) MGI PMID:15814898 MGI:3589099 NCBI chrNW_004936508:8,617,185...8,620,823 JBrowse link
nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot6 CCR4-NOT transcription complex subunit 6 involved_in ISO (PMID:20595389) UniProt PMID:20595389 NCBI chrNW_004936739:308,117...384,600 JBrowse link
G Cnot7 CCR4-NOT transcription complex subunit 7 acts_upstream_of_or_within ISO (MGI:3807625|PMID:18625844) MGI PMID:18625844 MGI:3807625 NCBI chrNW_004936573:6,288,397...6,305,984 JBrowse link
G Mlh1 mutL homolog 1 acts_upstream_of_or_within ISO (MGI:1934053|PMID:11337385) MGI PMID:11337385 MGI:1934053 NCBI chrNW_004936473:26,556,636...26,600,830 JBrowse link
G Parn poly(A)-specific ribonuclease acts_upstream_of_or_within ISO (MGI:3785219|PMID:18337750) MGI PMID:18337750 MGI:3785219 NCBI chrNW_004936501:2,666,908...2,810,159 JBrowse link
G Pnldc1 PARN like ribonuclease domain containing exonuclease 1 involved_in ISO (PMID:27515512)
(MGI:5825409|PMID:27515512)
UniProt PMID:27515512 MGI:5825409 NCBI chrNW_004936489:11,289,557...11,308,136 JBrowse link
G Zfp36 ZFP36 ring finger protein involved_in
acts_upstream_of_or_within
ISO (PMID:23644599)
(MGI:3589099|PMID:15814898)
BHF-UCL
MGI
PMID:15814898 PMID:23644599 MGI:3589099 NCBI chrNW_004936661:2,251,148...2,253,527 JBrowse link
polyuridylation-dependent mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tut4 terminal uridylyl transferase 4 involved_in ISO (MGI:6162305|PMID:28792939) UniProt PMID:28792939 MGI:6162305 NCBI chrNW_004936522:8,468,092...8,560,453 JBrowse link
G Tut7 terminal uridylyl transferase 7 involved_in ISO (MGI:6162305|PMID:28792939) UniProt PMID:28792939 MGI:6162305 NCBI chrNW_004936680:1,693,815...1,753,641 JBrowse link
positive regulation of apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2 associated X, apoptosis regulator involved_in ISO (PMID:11350920) BHF-UCL PMID:11350920 NCBI chrNW_004936664:2,968,103...2,973,652 JBrowse link
G Endog endonuclease G ISO RGD PMID:16407272 RGD:9685355 NCBI chrNW_004936487:16,282,115...16,285,486 JBrowse link
G Hsf1 heat shock transcription factor 1 ISO RGD PMID:21192280 RGD:10403035 NCBI chrNW_004936470:7,927,734...7,950,805 JBrowse link
G Igfbp3 insulin like growth factor binding protein 3 ISO RGD PMID:15125883 RGD:10402776 NCBI chrNW_004936478:20,511,490...20,518,251 JBrowse link
G Il6 interleukin 6 involved_in ISO (PMID:28433754) ARUK-UCL PMID:28433754 NCBI chrNW_004936549:7,015,595...7,016,246 JBrowse link
positive regulation of ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2l1 BCL2 like 1 involved_in ISO PMID:23792689 CAFA PMID:23792689 RGD:12793033 NCBI chrNW_004936485:18,654,046...18,707,324 JBrowse link
G Eno1 enolase 1 involved_in ISO (PMID:15459207) CAFA PMID:15459207 NCBI chrNW_004936623:3,115,357...3,130,289 JBrowse link
G LOC101972576 valosin containing protein involved_in ISO (PMID:23498975) ParkinsonsUK-UCL PMID:23498975 NCBI chrNW_004936524:3,085,959...3,102,461 JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 involved_in ISO PMID:15459207 CAFA PMID:15459207 RGD:12793039 NCBI chrNW_004936471:26,589,251...26,628,302 JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:22629444 RGD:7240532 NCBI chrNW_004936470:20,480,844...20,485,955 JBrowse link
G Ndufc2 NADH:ubiquinone oxidoreductase subunit C2 ISO RGD PMID:26888427 RGD:11040458 NCBI chrNW_004936498:6,626,334...6,636,973 JBrowse link
G Pid1 phosphotyrosine interaction domain containing 1 involved_in ISO (MGI:5306739|PMID:21080215) BHF-UCL PMID:21080215 MGI:5306739 NCBI chrNW_004936525:7,114,856...7,337,179 JBrowse link
G Ppara peroxisome proliferator activated receptor alpha acts_upstream_of ISO (PMID:31574452) ARUK-UCL PMID:31574452 NCBI chrNW_004936629:3,672,445...3,725,645 JBrowse link
G Ppargc1a PPARG coactivator 1 alpha involved_in ISO (MGI:5463828|PMID:23150719) UniProt PMID:23150719 MGI:5463828 NCBI chrNW_004936477:4,881,230...5,488,208 JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO RGD PMID:24096089 RGD:10413842 NCBI chrNW_004936489:12,118,538...12,913,664 JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:24747689) AgBase PMID:24747689 NCBI chrNW_004936521:10,296,097...10,316,673 JBrowse link
G Slc25a12 solute carrier family 25 member 12 ISO RGD PMID:19764902 RGD:13628741 NCBI chrNW_004936509:1,994,082...2,077,731 JBrowse link
G Stat3 signal transducer and activator of transcription 3 ISO RGD PMID:23590160 RGD:8694322 NCBI chrNW_004936490:17,119,189...17,178,402 JBrowse link
G Tafazzin tafazzin, phospholipid-lysophospholipid transacylase ISO RGD PMID:20348225 RGD:13432160 NCBI chrNW_004936809:1,160,265...1,168,956 JBrowse link
G Tmsb4x thymosin beta 4 X-linked involved_in ISO (PMID:21106936) CAFA PMID:21106936 NCBI chrNW_004936470:2,668,525...2,670,611 JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:5906931|PMID:28802038) ARUK-UCL PMID:28802038 MGI:5906931 NCBI chrNW_004936476:18,659,725...18,665,406 JBrowse link
positive regulation of base-excision repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fam168a family with sequence similarity 168 member A involved_in ISO (PMID:25260657) UniProt PMID:25260657 NCBI chrNW_004936498:2,601,341...2,784,446 JBrowse link
G Rps3 ribosomal protein S3 involved_in ISO (PMID:18973764) UniProt PMID:18973764 NCBI chrNW_004936498:4,198,189...4,204,531 JBrowse link
positive regulation of deadenylation-independent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zfp36 ZFP36 ring finger protein involved_in ISO (PMID:16364915) UniProt PMID:16364915 NCBI chrNW_004936661:2,251,148...2,253,527 JBrowse link
positive regulation of deoxyribonuclease activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcna proliferating cell nuclear antigen involved_in ISO (PMID:19443450) UniProt PMID:19443450 NCBI chrNW_004936485:13,766,221...13,771,215 JBrowse link
positive regulation of DNA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arrb2 arrestin beta 2 ISO RGD PMID:19254952 RGD:5509898 NCBI chrNW_004936677:3,173,054...3,181,475 JBrowse link
G C3ar1 complement C3a receptor 1 ISO RGD PMID:23713944 RGD:7411623 NCBI chrNW_004936892:347,547...355,143 JBrowse link
G Camk2d calcium/calmodulin dependent protein kinase II delta ISO RGD PMID:17267544 RGD:2303063 NCBI chrNW_004936563:4,226,412...4,526,139 JBrowse link
G Crhr2 corticotropin releasing hormone receptor 2 ISO RGD PMID:16005543 RGD:5131269 NCBI chrNW_004936478:6,901,098...6,947,719 JBrowse link
G Ddx39b DExD-box helicase 39B ISO RGD PMID:22446327 RGD:10401140 NCBI chrNW_004936727:1,968,032...1,980,789 JBrowse link
G Fgfr4 fibroblast growth factor receptor 4 involved_in ISO (PMID:21653700) UniProt PMID:21653700 NCBI chrNW_004936597:1,388,394...1,397,731 JBrowse link
G Gfer growth factor, augmenter of liver regeneration ISO RGD PMID:16937468 RGD:9685728 NCBI chrNW_004936694:2,051,362...2,053,812 JBrowse link
G Gsk3b glycogen synthase kinase 3 beta ISO RGD PMID:12721208 RGD:10045365 NCBI chrNW_004936536:6,730,070...6,893,818 JBrowse link
G Hgf hepatocyte growth factor involved_in ISO (PMID:2531289) UniProt PMID:2531289 NCBI chrNW_004936734:354,798...428,356 JBrowse link
G LOC101970101 cytochrome P450 1B1 ISO RGD PMID:20439821 RGD:7829726 NCBI chrNW_004936663:345,021...355,188 JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor involved_in ISO (PMID:9924025) UniProt PMID:9924025 NCBI chrNW_004936470:20,480,844...20,485,955 JBrowse link
G Nox4 NADPH oxidase 4 involved_in ISO (MGI:5009390|PMID:17942966) UniProt PMID:17942966 MGI:5009390 NCBI chrNW_004936736:230,465...394,859 JBrowse link
G Pak3 p21 (RAC1) activated kinase 3 ISO RGD PMID:12890786 RGD:7775030 NCBI chrNW_004936499:4,079,127...4,328,580 JBrowse link
G Pdgfb platelet derived growth factor subunit B involved_in ISO (PMID:10644978), (PMID:10734101), (PMID:11788434), (PMID:12070119), (PMID:16530387), (PMID:17942966), (PMID:19019919) UniProt PMID:10644978 PMID:10734101 PMID:11788434 PMID:12070119 PMID:16530387 PMID:17942966 PMID:19019919 NCBI chrNW_004936492:2,353,840...2,368,573 JBrowse link
G Pdgfrb platelet derived growth factor receptor beta involved_in ISO (MGI:5284758|PMID:19019919) UniProt PMID:19019919 MGI:5284758 NCBI chrNW_004936504:4,762,251...4,799,789 JBrowse link
G Prkd2 protein kinase D2 involved_in ISO (MGI:5306299|PMID:17226786) UniProt PMID:17226786 MGI:5306299 NCBI chrNW_004936664:524,532...551,451 JBrowse link
G Ptk2b protein tyrosine kinase 2 beta ISO RGD PMID:21451101 RGD:10041071 NCBI chrNW_004936675:216,970...325,670 JBrowse link
G Rgcc regulator of cell cycle involved_in ISO PMID:9756947 BHF-UCL PMID:9756947 RGD:633887 NCBI chrNW_004936667:232,807...245,131 JBrowse link
G Smoc2 SPARC related modular calcium binding 2 involved_in ISO (PMID:16774925) UniProt PMID:16774925 NCBI chrNW_004936489:17,454,274...17,594,894 JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase involved_in ISO PMID:16530387 UniProt PMID:16530387 RGD:8553998 NCBI chrNW_004936561:3,826,802...3,844,406 JBrowse link
G Tnf tumor necrosis factor ISO RGD PMID:9395232 RGD:14696805 NCBI chrNW_004936727:1,936,066...1,937,766 JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO (PMID:16774925) UniProt PMID:16774925 NCBI chrNW_004936476:16,245,134...16,261,180 JBrowse link
positive regulation of DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase ISO RGD PMID:27895165 RGD:12879393 NCBI chrNW_004936551:359,134...534,672 JBrowse link
positive regulation of DNA demethylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otud4 OTU deubiquitinase 4 involved_in ISO (PMID:25944111) UniProt PMID:25944111 NCBI chrNW_004936535:3,911,904...3,950,675 JBrowse link
G Stpg4 sperm-tail PG-rich repeat containing 4 involved_in ISO (MGI:5762940|PMID:23560077) UniProt PMID:23560077 MGI:5762940 NCBI chrNW_004936508:5,229,734...5,267,094 JBrowse link
G Tox thymocyte selection associated high mobility group box involved_in ISO (MGI:3045816|PMID:15078895) UniProt PMID:15078895 MGI:3045816 NCBI chrNW_004936496:13,847,210...14,146,110 JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in ISO (PMID:25944111) UniProt PMID:25944111 NCBI chrNW_004936530:7,693,681...7,724,215 JBrowse link
G Usp9x ubiquitin specific peptidase 9 X-linked involved_in ISO (PMID:25944111) UniProt PMID:25944111 NCBI chrNW_004936502:7,649,808...7,732,731 JBrowse link
positive regulation of DNA ligase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:9600082) CACAO PMID:9600082 NCBI chrNW_004936472:25,236,728...25,246,585 JBrowse link
G Xrcc1 X-ray repair cross complementing 1 involved_in ISO (PMID:28002403) UniProt PMID:28002403 NCBI chrNW_004936706:752,571...783,746 JBrowse link
positive regulation of DNA ligation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aplf aprataxin and PNKP like factor acts_upstream_of_or_within ISO (PMID:21211721) MGI PMID:21211721 NCBI chrNW_004936491:12,857,928...12,961,709 JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO PMID:10866811 UniProt PMID:10866811 RGD:10449519 NCBI chrNW_004936472:25,236,728...25,246,585 JBrowse link
G Parp3 poly(ADP-ribose) polymerase family member 3 acts_upstream_of_or_within ISO (PMID:21211721) MGI PMID:21211721 NCBI chrNW_004936529:3,291,282...3,297,581 JBrowse link
G Rad51 RAD51 recombinase involved_in ISO (PMID:8929543) UniProt PMID:8929543 NCBI chrNW_004936471:4,119,020...4,136,811 JBrowse link
positive regulation of DNA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa3 annexin A3 ISO RGD PMID:15744063 RGD:2316072 NCBI chrNW_004936676:2,153,752...2,216,498 JBrowse link
G Hmgb2 high mobility group box 2 ISO RGD PMID:8432381 RGD:2316096 NCBI chrNW_004936516:4,536,664...4,539,331 JBrowse link
G Igf1r insulin like growth factor 1 receptor ISO RGD PMID:19507001 RGD:2311507 NCBI chrNW_004936483:4,563,995...4,860,231 JBrowse link
G Npm1 nucleophosmin 1 ISO RGD PMID:11481036 RGD:1600909 NCBI chrNW_004936609:3,712,628...3,725,635 JBrowse link
G Npm2 nucleophosmin/nucleoplasmin 2 ISO lesser effect than Npm1 RGD PMID:11481036 RGD:1600909 NCBI chrNW_004936555:5,850,024...5,868,049 JBrowse link
G Oga O-GlcNAcase ISO RGD PMID:19139380 RGD:2305938 NCBI chrNW_004936600:3,983,983...3,996,360 JBrowse link
G Pfn1 profilin 1 ISO RGD PMID:10966486 RGD:2324858 NCBI chrNW_004936677:2,762,971...2,766,038 JBrowse link
positive regulation of DNA methylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnmt3l DNA methyltransferase 3 like involved_in ISO (MGI:5553039|PMID:24074865) UniProt PMID:24074865 MGI:5553039 NCBI chrNW_004936500:143,078...160,318 JBrowse link
G Mecp2 methyl-CpG binding protein 2 involved_in ISO (PMID:23960241) BHF-UCL PMID:23960241 NCBI chrNW_004936809:902,938...967,771 JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor involved_in ISO (PMID:19786833) BHF-UCL PMID:19786833 NCBI chrNW_004936470:20,480,844...20,485,955 JBrowse link
G Wt1 WT1 transcription factor acts_upstream_of ISO (PMID:23042785) ARUK-UCL PMID:23042785 NCBI chrNW_004936533:5,411,949...5,459,693 JBrowse link
positive regulation of DNA primase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prim2 DNA primase subunit 2 involved_in ISO (PMID:25550159) UniProt PMID:25550159 NCBI chrNW_004936476:3,736,663...3,997,936 JBrowse link
positive regulation of DNA recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zcwpw1 zinc finger CW-type and PWWP domain containing 1 involved_in ISO (MGI:6358520|PMID:31453335) ARUK-UCL PMID:31453335 MGI:6358520 NCBI chrNW_004936543:482,795...503,996 JBrowse link
positive regulation of DNA repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abraxas1 abraxas 1, BRCA1 A complex subunit involved_in ISO (PMID:17525340), (PMID:17643121), (PMID:19261748) UniProt PMID:17525340 PMID:17643121 PMID:19261748 NCBI chrNW_004936738:1,202,668...1,217,825 JBrowse link
G Apbb1 amyloid beta precursor protein binding family B member 1 involved_in ISO PMID:19282473
(MGI:3698695|PMID:17121854)
UniProt PMID:17121854 PMID:19282473 MGI:3698695 RGD:8553580 NCBI chrNW_004936842:452,682...476,533 JBrowse link
G Babam1 BRISC and BRCA1 A complex member 1 involved_in ISO (PMID:19261746), (PMID:19261748), (PMID:19261749) UniProt PMID:19261746 PMID:19261748 PMID:19261749 NCBI chrNW_004936596:3,574,507...3,582,370 JBrowse link
G Babam2 BRISC and BRCA1 A complex member 2 involved_in ISO (PMID:19261748) UniProt PMID:19261748 NCBI chrNW_004936493:4,375,393...4,863,050 JBrowse link
G Brca1 BRCA1 DNA repair associated involved_in ISO (PMID:17525340), (PMID:17643121), (PMID:19261748) UniProt PMID:17525340 PMID:17643121 PMID:19261748 NCBI chrNW_004936490:17,735,444...17,801,456 JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex subunit 3 involved_in ISO (PMID:17525341), (PMID:19261746), (PMID:19261748) UniProt PMID:17525341 PMID:19261746 PMID:19261748 NCBI chrNW_004936927:341,114...380,817 JBrowse link
G Cbx8 chromobox 8 ISO RGD PMID:23572236 RGD:9586727 NCBI chrNW_004936594:3,906,714...3,911,604 JBrowse link
G Cebpg CCAAT enhancer binding protein gamma involved_in ISO (PMID:16255782) UniProt PMID:16255782 NCBI chrNW_004936570:2,435,672...2,439,056 JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (PMID:24049074) UniProt PMID:24049074 NCBI chrNW_004936481:6,896,487...6,934,938 JBrowse link
G Egfr epidermal growth factor receptor involved_in ISO (PMID:17115032) UniProt PMID:17115032 NCBI chrNW_004936678:365,005...560,546 JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in ISO (PMID:22483866) UniProt PMID:22483866 NCBI chrNW_004936728:706,499...843,447 JBrowse link
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in ISO (PMID:7664335) UniProt PMID:7664335 NCBI chrNW_004936480:7,560,055...7,609,650 JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 involved_in ISO (PMID:19234442) UniProt PMID:19234442 NCBI chrNW_004936648:395,526...546,705 JBrowse link
G Eya3 EYA transcriptional coactivator and phosphatase 3 involved_in ISO (PMID:19234442) UniProt PMID:19234442 NCBI chrNW_004936474:12,191,391...12,295,380 JBrowse link
G Fgf10 fibroblast growth factor 10 involved_in ISO (PMID:14975937) UniProt PMID:14975937 NCBI chrNW_004936480:18,114,231...18,195,884 JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase ISO RGD PMID:1945835 RGD:729332 NCBI chrNW_004936486:16,744,607...16,923,209 JBrowse link
G Npas2 neuronal PAS domain protein 2 involved_in ISO (PMID:18819933) UniProt PMID:18819933 NCBI chrNW_004936661:96,312...176,395 JBrowse link
G Parg poly(ADP-ribose) glycohydrolase ISO RGD PMID:15158362 RGD:2316739 NCBI chrNW_004936728:428,028...538,413 JBrowse link
G Pcna proliferating cell nuclear antigen involved_in ISO (PMID:24939902) UniProt PMID:24939902 NCBI chrNW_004936485:13,766,221...13,771,215 JBrowse link
G Rnf168 ring finger protein 168 involved_in ISO (PMID:23760478)
(PMID:19203578), (PMID:19203579)
UniProt PMID:19203578 PMID:19203579 PMID:23760478 NCBI chrNW_004936784:1,073,236...1,094,575 JBrowse link
G Rnf8 ring finger protein 8 involved_in ISO (PMID:18001824), (PMID:18001825) UniProt PMID:18001824 PMID:18001825 NCBI chrNW_004936476:22,074,146...22,121,286 JBrowse link
G Rps3 ribosomal protein S3 involved_in ISO (PMID:23911537) UniProt PMID:23911537 NCBI chrNW_004936498:4,198,189...4,204,531 JBrowse link
G Sirt1 sirtuin 1 involved_in ISO (PMID:19934257) UniProt PMID:19934257 NCBI chrNW_004936521:10,296,097...10,316,673 JBrowse link
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in ISO (PMID:24790221) UniProt PMID:24790221 NCBI chrNW_004936672:1,686,070...1,838,315 JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase involved_in ISO (PMID:25928429) UniProt PMID:25928429 NCBI chrNW_004936606:4,518,525...4,540,109 JBrowse link
G Tmem161a transmembrane protein 161A involved_in ISO (PMID:16551573) BHF-UCL PMID:16551573 NCBI chrNW_004936596:2,274,989...2,287,288 JBrowse link
G Trim28 tripartite motif containing 28 involved_in ISO (PMID:17178852) UniProt PMID:17178852 NCBI chrNW_004937062:126,832...132,938 JBrowse link
G Ube2n ubiquitin conjugating enzyme E2 N involved_in ISO (PMID:16129784) HGNC-UCL PMID:16129784
G Ube2v2 ubiquitin conjugating enzyme E2 V2 ISO RGD PMID:12750002 RGD:1299567 NCBI chrNW_004936590:4,637,858...4,670,789 JBrowse link
G Uimc1 ubiquitin interaction motif containing 1 involved_in ISO (PMID:17525340), (PMID:17525341), (PMID:17525342), (PMID:17643121), (PMID:19261748) UniProt PMID:17525340 PMID:17525341 PMID:17525342 PMID:17643121 PMID:19261748 NCBI chrNW_004936597:1,143,835...1,260,339 JBrowse link
G Wrap53 WD repeat containing antisense to TP53 involved_in ISO (PMID:25512560) UniProt PMID:25512560 NCBI chrNW_004936595:936,184...952,784 JBrowse link
positive regulation of DNA strand elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pot1 protection of telomeres 1 involved_in ISO (PMID:16043710) BHF-UCL PMID:16043710 NCBI chrNW_004936605:836,824...919,099 JBrowse link
positive regulation of DNA-dependent DNA replication initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk2 cyclin dependent kinase 2 acts_upstream_of_or_within ISO (MGI:4439421|PMID:20215406) MGI PMID:20215406 MGI:4439421 NCBI chrNW_004936646:379,849...385,648 JBrowse link
G Ciz1 CDKN1A interacting zinc finger protein 1 acts_upstream_of_or_within ISO (MGI:3513706|PMID:15585571)
(MGI:4439421|PMID:20215406)
MGI PMID:15585571 PMID:20215406 MGI:3513706 MGI:4439421 NCBI chrNW_004936487:15,728,982...15,748,737 JBrowse link
positive regulation of DNA-directed DNA polymerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chtf18 chromosome transmission fidelity factor 18 involved_in ISO (PMID:12930902) UniProt PMID:12930902 NCBI chrNW_004936501:232,387...240,866 JBrowse link
G Chtf8 chromosome transmission fidelity factor 8 involved_in ISO (PMID:12930902) UniProt PMID:12930902 NCBI chrNW_004936475:19,282,226...19,285,758 JBrowse link
G Dscc1 DNA replication and sister chromatid cohesion 1 involved_in ISO (PMID:12930902) UniProt PMID:12930902 NCBI chrNW_004936470:26,849,541...26,869,040 JBrowse link
G Npm1 nucleophosmin 1 ISO RGD PMID:8123045 RGD:11535022 NCBI chrNW_004936609:3,712,628...3,725,635 JBrowse link
G Pcna proliferating cell nuclear antigen involved_in ISO (PMID:11595739) UniProt PMID:11595739 NCBI chrNW_004936485:13,766,221...13,771,215 JBrowse link
G Polg2 DNA polymerase gamma 2, accessory subunit involved_in ISO (PMID:10608893), (PMID:19837034), (PMID:19858216), (PMID:26123486) FlyBase PMID:10608893 PMID:19837034 PMID:19858216 PMID:26123486 NCBI chrNW_004936541:4,988,469...5,004,110 JBrowse link
G Rfc2 replication factor C subunit 2 involved_in ISO (PMID:12930902) UniProt PMID:12930902 NCBI chrNW_004936543:3,263,661...3,273,178 JBrowse link
G Rfc3 replication factor C subunit 3 involved_in ISO (PMID:12930902) UniProt PMID:12930902 NCBI chrNW_004936472:28,274,997...28,295,349 JBrowse link
G Rfc4 replication factor C subunit 4 involved_in ISO (PMID:12930902) UniProt PMID:12930902 NCBI chrNW_004936578:3,204,035...3,219,806 JBrowse link
G Rfc5 replication factor C subunit 5 involved_in ISO (PMID:12930902) UniProt PMID:12930902 NCBI chrNW_004936558:4,736,332...4,747,323 JBrowse link
positive regulation of DNA-templated transcription, elongation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alyref Aly/REF export factor involved_in ISO (PMID:22144908) UniProt PMID:22144908 NCBI chrNW_004936594:5,398,973...5,402,846 JBrowse link
G Ddx39b DExD-box helicase 39B involved_in ISO (PMID:22144908) UniProt PMID:22144908 NCBI chrNW_004936727:1,968,032...1,980,789 JBrowse link
G Ell3 elongation factor for RNA polymerase II 3 involved_in ISO (PMID:10882741) UniProt PMID:10882741 NCBI chrNW_004936471:6,835,410...6,838,582 JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in ISO (PMID:9326587) UniProt PMID:9326587 NCBI chrNW_004936728:706,499...843,447 JBrowse link
G Kat7 lysine acetyltransferase 7 involved_in ISO (MGI:6392952|PMID:31827282) UniProt PMID:31827282 MGI:6392952 NCBI chrNW_004936490:11,775,224...11,805,489 JBrowse link
G Scaf8 SR-related CTD associated factor 8 involved_in ISO (PMID:31104839) UniProt PMID:31104839 NCBI chrNW_004936489:7,059,075...7,289,656 JBrowse link
G Supt4h1 SPT4 homolog, DSIF elongation factor subunit involved_in ISO (PMID:9450929) UniProt PMID:9450929 NCBI chrNW_004936490:4,744,307...4,751,043 JBrowse link
G Supt5h SPT5 homolog, DSIF elongation factor subunit involved_in ISO (PMID:9450929) UniProt PMID:9450929 NCBI chrNW_004936661:2,280,390...2,308,085 JBrowse link
G Thoc1 THO complex 1 involved_in ISO (PMID:22144908) UniProt PMID:22144908 NCBI chrNW_004936550:590,119...638,152 JBrowse link
G Thoc5 THO complex 5 involved_in ISO (PMID:22144908) UniProt PMID:22144908 NCBI chrNW_004936657:3,465,707...3,503,966 JBrowse link
positive regulation of DNA-templated transcription, initiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bclaf1 BCL2 associated transcription factor 1 involved_in ISO (PMID:17938203) UniProt PMID:17938203 NCBI chrNW_004936560:3,681,145...3,711,831 JBrowse link
G Cebpa CCAAT enhancer binding protein alpha involved_in ISO (PMID:28186500) UniProt PMID:28186500 NCBI chrNW_004936570:2,513,561...2,516,213 JBrowse link
G Fosl1 FOS like 1, AP-1 transcription factor subunit involved_in ISO (PMID:23027619) CACAO PMID:23027619 NCBI chrNW_004936599:3,642,504...3,649,294 JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit involved_in ISO (PMID:23027619) CACAO PMID:23027619 NCBI chrNW_004936522:3,034,364...3,037,632 JBrowse link
G Mitf melanocyte inducing transcription factor involved_in ISO (PMID:12204775), (PMID:8995290) CACAO PMID:8995290 PMID:12204775 NCBI chrNW_004936603:1,682,411...1,858,295 JBrowse link
G Setx senataxin involved_in ISO (PMID:21700224) UniProt PMID:21700224 NCBI chrNW_004936487:18,858,384...18,945,253 JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in ISO (PMID:17332325) CACAO PMID:17332325 NCBI chrNW_004936546:5,331,220...5,332,669 JBrowse link
positive regulation of DNA-templated transcription, termination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Setx senataxin involved_in ISO (PMID:19515850) UniProt PMID:19515850 NCBI chrNW_004936487:18,858,384...18,945,253 JBrowse link
positive regulation of double-strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx11 DEAD/H-box helicase 11 involved_in ISO (PMID:23797032) UniProt PMID:23797032 NCBI chrNW_004936606:181,457...209,286 JBrowse link
G Fmn2 formin 2 involved_in ISO (PMID:26287480) UniProt PMID:26287480 NCBI chrNW_004936526:9,832,790...10,169,488 JBrowse link
G Foxm1 forkhead box M1 involved_in ISO (PMID:17101782)
(MGI:3698692|PMID:17101782)
UniProt PMID:17101782 MGI:3698692 NCBI chrNW_004936606:3,185,289...3,198,427 JBrowse link
G LOC101968899 oocyte expressed protein involved_in ISO (MGI:6467697|PMID:29125140) UniProt PMID:29125140 MGI:6467697 NCBI chrNW_004937318:2,623...3,622 JBrowse link
G Mgmt O-6-methylguanine-DNA methyltransferase involved_in ISO (PMID:24147153) BHF-UCL PMID:24147153 NCBI chrNW_004936486:16,744,607...16,923,209 JBrowse link
G Slf1 SMC5-SMC6 complex localization factor 1 involved_in ISO (PMID:25931565) UniProt PMID:25931565 NCBI chrNW_004936523:8,563,662...8,634,576 JBrowse link
G Slf2 SMC5-SMC6 complex localization factor 2 involved_in ISO (PMID:25931565) UniProt PMID:25931565 NCBI chrNW_004936600:4,715,504...4,766,273 JBrowse link
G Spidr scaffold protein involved in DNA repair involved_in ISO (PMID:23509288) UniProt PMID:23509288 NCBI chrNW_004936590:4,921,755...5,041,573 JBrowse link
G Spire1 spire type actin nucleation factor 1 involved_in ISO (PMID:26287480) UniProt PMID:26287480 NCBI chrNW_004936626:2,151,990...2,292,307 JBrowse link
G Spire2 spire type actin nucleation factor 2 involved_in ISO (PMID:26287480) UniProt PMID:26287480 NCBI chrNW_004936641:236,135...246,004 JBrowse link
G Timeless timeless circadian regulator involved_in ISO (PMID:23797032) UniProt PMID:23797032 NCBI chrNW_004936646:780,021...792,856 JBrowse link
G Wrap53 WD repeat containing antisense to TP53 involved_in ISO (PMID:27715493) UniProt PMID:27715493 NCBI chrNW_004936595:936,184...952,784 JBrowse link
G Zcwpw1 zinc finger CW-type and PWWP domain containing 1 involved_in ISO (MGI:6358520|PMID:31453335), (MGI:6442007|PMID:32374261), (MGI:6443266|PMID:32352380), (MGI:6467709|PMID:32744506) ARUK-UCL PMID:31453335 PMID:32352380 PMID:32374261 PMID:32744506 MGI:6358520 MGI:6442007 MGI:6443266 MGI:6467709 NCBI chrNW_004936543:482,795...503,996 JBrowse link
positive regulation of double-strand break repair via homologous recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actr2 actin related protein 2 involved_in ISO (PMID:29925947) UniProt PMID:29925947 NCBI chrNW_004936491:9,980,228...10,021,417 JBrowse link
G Arid2 AT-rich interaction domain 2 involved_in ISO (PMID:28381560) CACAO PMID:28381560 NCBI chrNW_004936512:4,020,303...4,199,390 JBrowse link
G Blm BLM RecQ like helicase acts_upstream_of_or_within ISO (MGI:5648586|PMID:25520194) MGI PMID:25520194 MGI:5648586 NCBI chrNW_004936483:16,194,092...16,295,803 JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor involved_in ISO (PMID:25820262) UniProt PMID:25820262 NCBI chrNW_004936728:706,499...843,447 JBrowse link
G Fancb FA complementation group B acts_upstream_of_or_within ISO (MGI:5648586|PMID:25520194) MGI PMID:25520194 MGI:5648586 NCBI chrNW_004936470:4,305,220...4,323,456 JBrowse link
G Fus FUS RNA binding protein involved_in ISO (PMID:10567410) UniProt PMID:10567410 NCBI chrNW_004936501:13,529,732...13,541,102 JBrowse link
G LOC101968899 oocyte expressed protein involved_in ISO (MGI:6272426|PMID:29955025) UniProt PMID:29955025 MGI:6272426 NCBI chrNW_004937318:2,623...3,622 JBrowse link
G Mms19 MMS19 homolog, cytosolic iron-sulfur assembly component involved_in ISO (PMID:29225034) UniProt PMID:29225034 NCBI chrNW_004936636:2,191,748...2,221,027 JBrowse link
G Mrnip MRN complex interacting protein involved_in ISO (PMID:27568553) UniProt PMID:27568553 NCBI chrNW_004936739:926,678...955,024 JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 involved_in ISO (PMID:26344098), (PMID:30356214) UniProt PMID:26344098 PMID:30356214 NCBI chrNW_004936526:3,102,468...3,147,601 JBrowse link
G Rad51ap1 RAD51 associated protein 1 involved_in ISO (PMID:17996710), (PMID:17996711) UniProt PMID:17996710 PMID:17996711 NCBI chrNW_004936606:4,697,369...4,716,006 JBrowse link
G Timeless timeless circadian regulator involved_in ISO (PMID:26344098), (PMID:30356214) UniProt PMID:26344098 PMID:30356214 NCBI chrNW_004936646:780,021...792,856 JBrowse link
G Was WASP actin nucleation promoting factor involved_in ISO (PMID:29925947) UniProt PMID:29925947 NCBI chrNW_004936721:634,685...641,248 JBrowse link
G Wdr48 WD repeat domain 48 involved_in ISO (PMID:27239033), (PMID:27463890) UniProt PMID:27239033 PMID:27463890 NCBI chrNW_004936473:28,307,913...28,351,727 JBrowse link
G Wrap53 WD repeat containing antisense to TP53 involved_in ISO (PMID:25512560) UniProt PMID:25512560 NCBI chrNW_004936595:936,184...952,784 JBrowse link
positive regulation of double-strand break repair via nonhomologous end joining term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dtx3l deltex E3 ubiquitin ligase 3L involved_in ISO (PMID:28525742) UniProt PMID:28525742 NCBI chrNW_004936536:8,844,778...8,853,442 JBrowse link
G Fh fumarate hydratase involved_in ISO (PMID:26237645) UniProt PMID:26237645 NCBI chrNW_004936526:8,936,096...8,965,155 JBrowse link
G Kmt5b lysine methyltransferase 5B involved_in ISO (PMID:28114273) UniProt PMID:28114273 NCBI chrNW_004936599:1,928,172...1,983,983 JBrowse link
G Kmt5c lysine methyltransferase 5C involved_in ISO (PMID:28114273) UniProt PMID:28114273 NCBI chrNW_004936886:596,949...602,959 JBrowse link
G LOC101962206 histone-lysine N-methyltransferase SETMAR involved_in ISO (PMID:20620605), (PMID:21491884) UniProt PMID:20620605 PMID:21491884 NCBI chrNW_004936577:3,761,078...3,771,864 JBrowse link
G LOC101966755 polynucleotide kinase 3'-phosphatase involved_in ISO (PMID:12032095) CACAO PMID:12032095 NCBI chrNW_004936664:3,649,020...3,656,545 JBrowse link
G LOC101967900 lysine-specific demethylase 4D acts_upstream_of_or_within ISO (PMID:24550317) MGI PMID:24550317 NCBI chrNW_004936674:53,200...73,042 JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 involved_in ISO (PMID:29656893) UniProt PMID:29656893 NCBI chrNW_004936474:538,703...542,901 JBrowse link
G Parp3 poly(ADP-ribose) polymerase family member 3 involved_in ISO (PMID:24598253) UniProt PMID:24598253 NCBI chrNW_004936529:3,291,282...3,297,581 JBrowse link
G Parp9 poly(ADP-ribose) polymerase family member 9 involved_in ISO (PMID:28525742) UniProt PMID:28525742 NCBI chrNW_004936536:8,806,824...8,845,099 JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in ISO (PMID:26237645) UniProt PMID:26237645 NCBI chrNW_004936590:4,722,914...4,887,615 JBrowse link
G Rif1 replication timing regulatory factor 1 involved_in ISO (PMID:28241136)
(MGI:5468037|PMID:23306437), (MGI:5476381|PMID:23333305)
UniProt
CACAO
PMID:23306437 PMID:23333305 PMID:28241136 MGI:5468037 MGI:5476381 NCBI chrNW_004936469:26,045,500...26,105,980 JBrowse link
G Shld1 shieldin complex subunit 1 involved_in ISO (PMID:29656893) UniProt PMID:29656893 NCBI chrNW_004936485:13,179,218...13,267,980 JBrowse link
G Shld2 shieldin complex subunit 2 involved_in ISO (PMID:29656893), (PMID:29789392) UniProt PMID:29656893 PMID:29789392 NCBI chrNW_004936601:5,315,297...5,400,752 JBrowse link
G Shld3 shieldin complex subunit 3 involved_in ISO (PMID:29656893) UniProt PMID:29656893
G Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 involved_in ISO (PMID:25294876) UniProt PMID:25294876 NCBI chrNW_004936672:1,686,070...1,838,315 JBrowse link
G Top2b DNA topoisomerase II beta ISO RGD PMID:22019940 RGD:13432143 NCBI chrNW_004936473:17,146,576...17,189,589 JBrowse link
G Wrap53 WD repeat containing antisense to TP53 involved_in ISO (PMID:25512560) UniProt PMID:25512560 NCBI chrNW_004936595:936,184...952,784 JBrowse link
positive regulation of endodeoxyribonuclease activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 involved_in ISO (PMID:20605787) UniProt PMID:20605787 NCBI chrNW_004936621:620,163...639,115 JBrowse link
G Ddx11 DEAD/H-box helicase 11 involved_in ISO (PMID:18499658) UniProt PMID:18499658 NCBI chrNW_004936606:181,457...209,286 JBrowse link
G Prkcd protein kinase C delta involved_in ISO (PMID:19059439) UniProt PMID:19059439 NCBI chrNW_004936473:3,892,625...3,923,467 JBrowse link
G Rps3 ribosomal protein S3 involved_in ISO (PMID:18973764) UniProt PMID:18973764 NCBI chrNW_004936498:4,198,189...4,204,531 JBrowse link
positive regulation of endoribonuclease activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101955831 heat shock 70 kDa protein 1 involved_in ISO (PMID:20625543) ParkinsonsUK-UCL PMID:20625543 NCBI chrNW_004936727:1,718,952...1,721,691 JBrowse link
G LOC101956126 heat shock 70 kDa protein 1 involved_in ISO (PMID:20625543) ParkinsonsUK-UCL PMID:20625543 NCBI chrNW_004936727:1,732,323...1,735,128 JBrowse link
positive regulation of glycolytic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd5 ectonucleoside triphosphate diphosphohydrolase 5 (inactive) involved_in ISO (MGI:4881347|PMID:21074248) UniProt PMID:21074248 MGI:4881347 NCBI chrNW_004936488:3,241,004...3,280,360 JBrowse link
G Esrrb estrogen related receptor beta involved_in ISO PMID:24481529 BHF-UCL PMID:24481529 RGD:12910990 NCBI chrNW_004936488:5,350,133...5,452,366 JBrowse link
G Gck glucokinase ISO RGD PMID:17553851 RGD:2301905 NCBI chrNW_004936478:19,104,477...19,118,915 JBrowse link
G Gpd1 glycerol-3-phosphate dehydrogenase 1 acts_upstream_of_or_within ISO (MGI:1927687|PMID:11147825) MGI PMID:11147825 MGI:1927687 NCBI chrNW_004936512:7,762,325...7,770,007 JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A acts_upstream_of_or_within ISO (MGI:3766710|PMID:17408640) MGI PMID:17408640 MGI:3766710 NCBI chrNW_004936565:335,238...394,683 JBrowse link
G Ifng interferon gamma involved_in ISO (MGI:6304699|PMID:29061364) ARUK-UCL PMID:29061364 MGI:6304699 NCBI chrNW_004936545:6,139,130...6,144,543 JBrowse link
G Igf1 insulin like growth factor 1 involved_in ISO (PMID:7688386) BHF-UCL PMID:7688386 NCBI chrNW_004936492:11,709,623...11,784,028 JBrowse link
G Ins insulin involved_in ISO (PMID:381941)
(PMID:7688386)
BHF-UCL PMID:381941 PMID:7688386 NCBI chrNW_004936816:1,002,137...1,003,357 JBrowse link
G Insr insulin receptor involved_in ISO (PMID:7693131) BHF-UCL PMID:7693131 NCBI chrNW_004936588:4,345,306...4,453,380 JBrowse link
G LOC101959175 amyloid beta precursor protein involved_in ISO (PMID:29061364) ARUK-UCL PMID:29061364 NCBI chrNW_004936640:1,549,977...1,787,436 JBrowse link
G Mif macrophage migration inhibitory factor ISO RGD PMID:11086030 RGD:1642010 NCBI chrNW_004936619:1,207,058...1,208,010 JBrowse link
G Mlxipl MLX interacting protein like involved_in ISO (PMID:19995986)
(MGI:3041761|PMID:15118080)
BHF-UCL PMID:15118080 PMID:19995986 MGI:3041761 NCBI chrNW_004936543:2,839,105...2,856,997 JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:22842522 RGD:7207891 NCBI chrNW_004936470:20,480,844...20,485,955 JBrowse link
G P2rx7 purinergic receptor P2X 7 involved_in ISO (PMID:22898868) CACAO PMID:22898868 NCBI chrNW_004936558:3,106,819...3,149,689 JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISO PMID:11069105 UniProt PMID:11069105 RGD:8554193 NCBI chrNW_004936518:1,817,051...1,843,376 JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in ISO PMID:11069105 UniProt PMID:11069105 RGD:8554193 NCBI chrNW_004936522:4,872,360...4,939,873 JBrowse link
G Psen1 presenilin 1 involved_in ISO (PMID:29061364) ARUK-UCL PMID:29061364 NCBI chrNW_004936488:2,464,623...2,528,807 JBrowse link
G Slc4a4 solute carrier family 4 member 4 acts_upstream_of ISO (PMID:21976511)
(MGI:5295108|PMID:21976511)
ARUK-UCL PMID:21976511 MGI:5295108 NCBI chrNW_004936598:3,391,587...3,713,629 JBrowse link
G Zbtb20 zinc finger and BTB domain containing 20 involved_in ISO (MGI:5913553|PMID:28327662) UniProt PMID:28327662 MGI:5913553 NCBI chrNW_004936536:1,776,065...2,546,286 JBrowse link
positive regulation of guanylate cyclase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora2b adenosine A2b receptor acts_upstream_of_or_within ISO (MGI:3794903|PMID:18340377) MGI PMID:18340377 MGI:3794903 NCBI chrNW_004936821:583,463...608,189 JBrowse link
G Guca1a guanylate cyclase activator 1A ISO RGD PMID:12545196 RGD:1599357 NCBI chrNW_004936476:17,690,484...17,701,288 JBrowse link
G Nos3 nitric oxide synthase 3 involved_in ISO (PMID:17502619) BHF-UCL PMID:17502619 NCBI chrNW_004936527:6,427,147...6,445,770 JBrowse link
positive regulation of interleukin-4-dependent isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnfsf4 TNF superfamily member 4 involved_in ISO (MGI:3763508|PMID:12496423) BHF-UCL PMID:12496423 MGI:3763508 NCBI chrNW_004936481:14,391,359...14,409,514 JBrowse link
positive regulation of isotype switching term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Exosc3 exosome component 3 acts_upstream_of_or_within ISO (MGI:5009766|PMID:21255825) MGI PMID:21255825 MGI:5009766 NCBI chrNW_004936524:5,580,855...5,586,170 JBrowse link
G Exosc6 exosome component 6 acts_upstream_of_or_within ISO (MGI:5009766|PMID:21255825) MGI PMID:21255825 MGI:5009766 NCBI chrNW_004936475:23,295,441...23,297,321 JBrowse link
G Hmces 5-hydroxymethylcytosine binding, ES cell specific involved_in ISO (MGI:6393148|PMID:31806351) UniProt PMID:31806351 MGI:6393148 NCBI chrNW_004936798:261,566...284,480 JBrowse link
G Kmt5b lysine methyltransferase 5B involved_in ISO (MGI:6370097|PMID:28114273) UniProt PMID:28114273 MGI:6370097 NCBI chrNW_004936599:1,928,172...1,983,983 JBrowse link
G Kmt5c lysine methyltransferase 5C involved_in ISO (MGI:6370097|PMID:28114273) UniProt PMID:28114273 MGI:6370097 NCBI chrNW_004936886:596,949...602,959 JBrowse link
G Mad2l2 mitotic arrest deficient 2 like 2 involved_in ISO (PMID:29656893) UniProt PMID:29656893 NCBI chrNW_004936474:538,703...542,901 JBrowse link
G Paxip1 PAX interacting protein 1 involved_in ISO (MGI:4821506|PMID:20671152) UniProt PMID:20671152 MGI:4821506 NCBI chrNW_004936527:9,440,129...9,488,215 JBrowse link
G Rif1 replication timing regulatory factor 1 involved_in ISO (MGI:5468036|PMID:23306439), (MGI:5476381|PMID:23333305), (MGI:5490831|PMID:23333306) UniProt PMID:23306439 PMID:23333305 PMID:23333306 MGI:5468036 MGI:5476381 MGI:5490831 NCBI chrNW_004936469:26,045,500...26,105,980 JBrowse link
G Shld1 shieldin complex subunit 1 involved_in ISO (PMID:29656893) UniProt PMID:29656893 NCBI chrNW_004936485:13,179,218...13,267,980 JBrowse link
G Shld2 shieldin complex subunit 2 involved_in ISO (PMID:29656893) UniProt PMID:29656893 NCBI chrNW_004936601:5,315,297...5,400,752 JBrowse link
G Shld3 shieldin complex subunit 3 involved_in ISO (PMID:29656893) UniProt PMID:29656893
G Tfrc transferrin receptor involved_in ISO (PMID:26642240) UniProt PMID:26642240 NCBI chrNW_004936784:696,738...728,385 JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 involved_in ISO (PMID:23345425)
(MGI:3041657|PMID:15077110), (MGI:3046005|PMID:15159415)
(PMID:23760478)
UniProt PMID:15077110 PMID:15159415 PMID:23345425 PMID:23760478 MGI:3041657 MGI:3046005 NCBI chrNW_004936471:6,589,395...6,668,242 JBrowse link
positive regulation of isotype switching to IgA isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mlh1 mutL homolog 1 involved_in ISO (MGI:1342394|PMID:10430621) CAFA PMID:10430621 MGI:1342394 NCBI chrNW_004936473:26,556,636...26,600,830 JBrowse link
G Msh2 mutS homolog 2 involved_in ISO (MGI:1342394|PMID:10430621) CAFA PMID:10430621 MGI:1342394 NCBI chrNW_004936508:4,943,987...5,013,356 JBrowse link
G Nsd2 nuclear receptor binding SET domain protein 2 acts_upstream_of_or_within ISO (MGI:5462481|PMID:23241889) MGI PMID:23241889 MGI:5462481 NCBI chrNW_004936477:21,460,442...21,531,563 JBrowse link
G Pms2 PMS1 homolog 2, mismatch repair system component involved_in ISO (MGI:1342394|PMID:10430621) CAFA PMID:10430621 MGI:1342394 NCBI chrNW_004936750:439,396...468,747 JBrowse link
G Tgfb1 transforming growth factor beta 1 acts_upstream_of_or_within ISO (PMID:14988498) MGI PMID:14988498 NCBI chrNW_004936661:3,742,080...3,758,266 JBrowse link
G Tnfsf13 TNF superfamily member 13 acts_upstream_of_or_within ISO (MGI:3037416|PMID:14988498)
(PMID:14988498)
MGI PMID:14988498 MGI:3037416 NCBI chrNW_004936595:839,877...842,962 JBrowse link
positive regulation of isotype switching to IgE isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clcf1 cardiotrophin like cytokine factor 1 involved_in ISO (MGI:3777853|PMID:12023368) BHF-UCL PMID:12023368 MGI:3777853 NCBI chrNW_004936599:2,372,889...2,376,316 JBrowse link
G Stat6 signal transducer and activator of transcription 6 acts_upstream_of_or_within ISO (MGI:1345885|PMID:10490661) MGI PMID:10490661 MGI:1345885 NCBI chrNW_004936646:1,297,530...1,312,508 JBrowse link
positive regulation of isotype switching to IgG isotypes term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atad5 ATPase family AAA domain containing 5 acts_upstream_of_or_within ISO (MGI:5763555|PMID:25404367) MGI PMID:25404367 MGI:5763555 NCBI chrNW_004936538:2,815,370...2,877,084 JBrowse link
G Cd28 CD28 molecule acts_upstream_of_or_within ISO (MGI:62368|PMID:7688139) MGI PMID:7688139 MGI:62368 NCBI chrNW_004936631:335,411...363,407 JBrowse link
G Cd40 CD40 molecule acts_upstream_of_or_within ISO (MGI:2670820|PMID:12882831) MGI PMID:12882831 MGI:2670820 NCBI chrNW_004936514:6,936,915...6,947,246 JBrowse link
G Ifng interferon gamma acts_upstream_of_or_within ISO (MGI:2670820|PMID:12882831) MGI PMID:12882831 MGI:2670820 NCBI chrNW_004936545:6,139,130...6,144,543 JBrowse link
G Il2 interleukin 2 acts_upstream_of_or_within ISO (MGI:87443|PMID:1830926) MGI PMID:1830926 MGI:87443 NCBI chrNW_004936662:1,594,953...1,599,625 JBrowse link
G Mlh1 mutL homolog 1 involved_in ISO (MGI:1342394|PMID:10430621) CAFA PMID:10430621 MGI:1342394 NCBI chrNW_004936473:26,556,636...26,600,830 JBrowse link
G Msh2 mutS homolog 2 involved_in ISO (MGI:1342394|PMID:10430621) CAFA PMID:10430621 MGI:1342394 NCBI chrNW_004936508:4,943,987...5,013,356 JBrowse link
G Pagr1 PAXIP1 associated glutamate rich protein 1 involved_in ISO (MGI:5752090|PMID:26744420) UniProt PMID:26744420 MGI:5752090 NCBI chrNW_004936501:12,657,092...12,660,106 JBrowse link
G Paxip1 PAX interacting protein 1 involved_in ISO (MGI:5752090|PMID:26744420) UniProt PMID:26744420 MGI:5752090 NCBI chrNW_004936527:9,440,129...9,488,215 JBrowse link
G Pms2 PMS1 homolog 2, mismatch repair system component involved_in ISO (MGI:1342394|PMID:10430621) CAFA PMID:10430621 MGI:1342394 NCBI chrNW_004936750:439,396...468,747 JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C acts_upstream_of_or_within ISO (MGI:85031|PMID:9015183) MGI PMID:9015183 MGI:85031 NCBI chrNW_004936567:5,266,653...5,378,464 JBrowse link
G Tbx21 T-box transcription factor 21 acts_upstream_of_or_within ISO (MGI:2670820|PMID:12882831) MGI PMID:12882831 MGI:2670820 NCBI chrNW_004936490:13,546,405...13,558,635 JBrowse link
positive regulation of meiotic DNA double-strand break formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd31 ankyrin repeat domain 31 involved_in ISO (MGI:6316415|PMID:31003867), (MGI:6316551|PMID:31000436) UniProt PMID:31000436 PMID:31003867 MGI:6316415 MGI:6316551 NCBI chrNW_004936549:1,450,490...1,612,151 JBrowse link
positive regulation of miRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lin28b lin-28 homolog B involved_in ISO (PMID:18951094) CACAO PMID:18951094 NCBI chrNW_004936564:1,646,469...1,768,879 JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO (PMID:20547861) UniProt PMID:20547861 NCBI chrNW_004936491:1,989,429...2,032,430 JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A involved_in ISO (PMID:22055188), (PMID:24048733) UniProt PMID:22055188 PMID:24048733 NCBI chrNW_004936474:19,714,145...19,722,512 JBrowse link
G Zswim8 zinc finger SWIM-type containing 8 involved_in ISO (PMID:33184234), (PMID:33184237)
(MGI:6508520|PMID:33184237)
UniProt PMID:33184234 PMID:33184237 MGI:6508520 NCBI chrNW_004936521:5,346,971...5,363,297 JBrowse link
positive regulation of miRNA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dicer1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (MGI:4868529|PMID:20975942) MGI PMID:20975942 MGI:4868529 NCBI chrNW_004936846:528,768...584,599 JBrowse link
G Hras HRas proto-oncogene, GTPase involved_in ISO (PMID:23027131) BHF-UCL PMID:23027131 NCBI chrNW_004936888:375,372...378,125 JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 involved_in ISO (PMID:22357537) BHF-UCL PMID:22357537 NCBI chrNW_004936520:733,760...850,563 JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in ISO (PMID:22357537) BHF-UCL PMID:22357537 NCBI chrNW_004936599:3,800,142...3,810,583 JBrowse link
positive regulation of mismatch repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdac10 histone deacetylase 10 involved_in ISO (PMID:26221039) UniProt PMID:26221039 NCBI chrNW_004936629:562,038...567,709 JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:15014079) UniProt PMID:15014079 NCBI chrNW_004936472:25,236,728...25,246,585 JBrowse link
G Prkcg protein kinase C gamma involved_in ISO (PMID:15808853) HGNC-UCL PMID:15808853 NCBI chrNW_004936994:87,525...105,125 JBrowse link
positive regulation of mitochondrial DNA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppargc1a PPARG coactivator 1 alpha involved_in ISO (MGI:5463828|PMID:23150719) UniProt PMID:23150719 MGI:5463828 NCBI chrNW_004936477:4,881,230...5,488,208 JBrowse link
positive regulation of mitochondrial RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grsf1 G-rich RNA sequence binding factor 1 involved_in ISO (PMID:29967381) UniProt PMID:29967381 NCBI chrNW_004936598:3,961,051...3,978,791 JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO (PMID:19509288), (PMID:29967381) UniProt PMID:19509288 PMID:29967381 NCBI chrNW_004936491:1,989,429...2,032,430 JBrowse link
G Supv3l1 Suv3 like RNA helicase involved_in ISO (PMID:19509288), (PMID:29967381)
(PMID:19864255)
UniProt PMID:19509288 PMID:19864255 PMID:29967381 NCBI chrNW_004936521:9,237,081...9,264,441 JBrowse link
positive regulation of mitochondrial transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chchd10 coiled-coil-helix-coiled-coil-helix domain containing 10 involved_in ISO (MGI:5920587|PMID:28585542) UniProt PMID:28585542 MGI:5920587 NCBI chrNW_004936619:1,323,247...1,325,520 JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in ISO (MGI:6120139|PMID:23283301) UniProt PMID:23283301 MGI:6120139 NCBI chrNW_004936518:1,817,051...1,843,376 JBrowse link
G Sirt3 sirtuin 3 involved_in ISO (MGI:6120139|PMID:23283301) UniProt PMID:23283301 MGI:6120139 NCBI chrNW_004936888:63,131...78,536 JBrowse link
positive regulation of mRNA 3'-end processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnb1 cyclin B1 ISO c-mos polyadenylation RGD PMID:15291744 RGD:1578405 NCBI chrNW_004936480:400,287...407,677 JBrowse link
G Cdc73 cell division cycle 73 involved_in ISO (PMID:19136632) UniProt PMID:19136632 NCBI chrNW_004936638:1,365,457...1,482,497 JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in ISO (PMID:27940037) UniProt PMID:27940037 NCBI chrNW_004936519:1,946,684...1,987,036 JBrowse link
G Leo1 LEO1 homolog, Paf1/RNA polymerase II complex component involved_in ISO (PMID:21329879) UniProt PMID:21329879 NCBI chrNW_004936471:13,753,061...13,783,990 JBrowse link
G Ncbp1 nuclear cap binding protein subunit 1 involved_in ISO (PMID:9342333) UniProt PMID:9342333 NCBI chrNW_004936524:6,429,735...6,465,035 JBrowse link
G Ncbp2 nuclear cap binding protein subunit 2 involved_in ISO (PMID:9342333) UniProt PMID:9342333 NCBI chrNW_004936833:920,683...928,047 JBrowse link
G Paf1 PAF1 homolog, Paf1/RNA polymerase II complex component involved_in ISO (PMID:21329879) UniProt PMID:21329879 NCBI chrNW_004936661:2,236,121...2,241,086 JBrowse link
positive regulation of mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnot1 CCR4-NOT transcription complex subunit 1 involved_in ISO (PMID:22977175) BHF-UCL PMID:22977175 NCBI chrNW_004936475:10,302,091...10,384,945 JBrowse link
G Cnot7 CCR4-NOT transcription complex subunit 7 involved_in ISO (PMID:23386060), (PMID:25038453) UniProt PMID:23386060 PMID:25038453 NCBI chrNW_004936573:6,288,397...6,305,984 JBrowse link
G Cnot8 CCR4-NOT transcription complex subunit 8 involved_in ISO (PMID:22977175) BHF-UCL PMID:22977175 NCBI chrNW_004936515:7,971,504...7,988,257 JBrowse link
G Gtpbp1 GTP binding protein 1 involved_in ISO PMID:21515746 UniProt PMID:21515746 RGD:8553842 NCBI chrNW_004936492:2,627,881...2,648,295 JBrowse link
G Hnrnpr heterogeneous nuclear ribonucleoprotein R ISO RGD PMID:15798208 RGD:9854643 NCBI chrNW_004936474:8,531,434...8,567,734 JBrowse link
G LOC101960021 KH-type splicing regulatory protein involved_in ISO (PMID:16126846) UniProt PMID:16126846 NCBI chrNW_004936588:3,764,401...3,774,492 JBrowse link
G Mov10 Mov10 RISC complex RNA helicase involved_in ISO (PMID:24726324) UniProt PMID:24726324 NCBI chrNW_004936690:1,229,249...1,254,754 JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO (PMID:16410805) RGD
UniProt
PMID:737213 PMID:16410805 RGD:11554176 NCBI chrNW_004936491:1,989,429...2,032,430 JBrowse link
G Prr5l proline rich 5 like involved_in ISO (PMID:21964062) UniProt PMID:21964062 NCBI chrNW_004936533:1,895,594...1,975,442 JBrowse link
G Rc3h1 ring finger and CCCH-type domains 1 involved_in ISO (MGI:5706859|PMID:26000482), (MGI:5751631|PMID:26255671)
(MGI:6154479|PMID:25026077)
UniProt PMID:25026077 PMID:26000482 PMID:26255671 MGI:5706859 MGI:5751631 MGI:6154479 NCBI chrNW_004936481:13,919,006...13,973,868 JBrowse link
G Upf1 UPF1 RNA helicase and ATPase involved_in ISO (PMID:25225333), (PMID:26255671)
(PMID:24726324)
UniProt PMID:24726324 PMID:25225333 PMID:26255671 NCBI chrNW_004936596:2,469,444...2,505,688 JBrowse link
G Zc3h12a zinc finger CCCH-type containing 12A involved_in ISO (PMID:19909337)
(MGI:3842851|PMID:19322177), (MGI:5706859|PMID:26000482), (MGI:5706909|PMID:23185455), (MGI:5751631|PMID:26255671)
UniProt PMID:19322177 PMID:19909337 PMID:23185455 PMID:26000482 PMID:26255671 MGI:3842851 MGI:5706859 MGI:5706909 MGI:5751631 NCBI chrNW_004936474:19,714,145...19,722,512 JBrowse link
G Zc3hav1 zinc finger CCCH-type containing, antiviral 1 involved_in ISO PMID:17185417
(PMID:21876179)
UniProt PMID:17185417 PMID:21876179 RGD:8553432 NCBI chrNW_004936592:3,321,564...3,379,015 JBrowse link
G Zfp36 ZFP36 ring finger protein involved_in ISO (MGI:5795825|PMID:15634918) UniProt PMID:15634918 MGI:5795825 NCBI chrNW_004936661:2,251,148...2,253,527 JBrowse link
positive regulation of mRNA cleavage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt21 nudix hydrolase 21 involved_in ISO (PMID:15937220) UniProt PMID:15937220 NCBI chrNW_004936475:8,739,992...8,759,165 JBrowse link
positive regulation of mRNA modification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 ISO RGD PMID:9792439 RGD:10041038 NCBI chrNW_004939393:628...6,234 JBrowse link
positive regulation of mRNA polyadenylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 involved_in ISO (PMID:28383716) UniProt PMID:28383716 NCBI chrNW_004936483:17,216,288...17,296,430 JBrowse link
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO (MGI:5300629|PMID:22153079) UniProt PMID:22153079 MGI:5300629 NCBI chrNW_004936601:2,470,021...2,616,451 JBrowse link
G Hsf1 heat shock transcription factor 1 involved_in ISO (PMID:14707147) UniProt PMID:14707147 NCBI chrNW_004936470:7,927,734...7,950,805 JBrowse link
G Nudt21 nudix hydrolase 21 involved_in ISO (PMID:15937220) UniProt PMID:15937220 NCBI chrNW_004936475:8,739,992...8,759,165 JBrowse link
positive regulation of mRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adarb1 adenosine deaminase RNA specific B1 ISO RGD PMID:10331393 RGD:10450893 NCBI chrNW_004936778:1,056,259...1,137,772 JBrowse link
positive regulation of mRNA splicing, via spliceosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celf3 CUGBP Elav-like family member 3 involved_in ISO (PMID:15009664) UniProt PMID:15009664 NCBI chrNW_004936580:1,897,694...1,911,817 JBrowse link
G Dazap1 DAZ associated protein 1 acts_upstream_of_or_within ISO (MGI:5532638|PMID:23636947) MGI PMID:23636947 MGI:5532638 NCBI chrNW_004936588:730,626...758,074 JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 acts_upstream_of_or_within ISO (MGI:3814796|PMID:18480465) MGI PMID:18480465 MGI:3814796 NCBI chrNW_004936594:4,148,401...4,160,290 JBrowse link
G Hmx2 H6 family homeobox 2 acts_upstream_of_or_within ISO (MGI:5532638|PMID:23636947) MGI PMID:23636947 MGI:5532638 NCBI chrNW_004936486:11,789,991...11,792,500 JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 acts_upstream_of_or_within ISO (MGI:5532638|PMID:23636947) MGI PMID:23636947 MGI:5532638 NCBI chrNW_004936542:7,577,192...7,581,598 JBrowse link
G Lmntd2 lamin tail domain containing 2 acts_upstream_of_or_within ISO (MGI:5532638|PMID:23636947) MGI PMID:23636947 MGI:5532638 NCBI chrNW_004936888:397,581...403,551 JBrowse link
G LOC106144891 CUGBP Elav-like family member 4 involved_in ISO (PMID:15009664) UniProt PMID:15009664 NCBI chrNW_004936517:8,010,133...8,010,721 JBrowse link
G Ncbp1 nuclear cap binding protein subunit 1 involved_in ISO (PMID:23793891) CAFA PMID:23793891 NCBI chrNW_004936524:6,429,735...6,465,035 JBrowse link
G Nup98 nucleoporin 98 and 96 precursor involved_in ISO (PMID:28221134) UniProt PMID:28221134 NCBI chrNW_004936498:1,112,724...1,219,790 JBrowse link
G Obi1 ORC ubiquitin ligase 1 acts_upstream_of_or_within ISO (MGI:5532638|PMID:23636947) MGI PMID:23636947 MGI:5532638 NCBI chrNW_004936511:2,800,466...2,847,896 JBrowse link
G Prdx6 peroxiredoxin 6 involved_in ISO (PMID:16186110) UniProt PMID:16186110 NCBI chrNW_004936481:14,223,422...14,233,634 JBrowse link
G Prpf19 pre-mRNA processing factor 19 acts_upstream_of_or_within ISO (MGI:3814796|PMID:18480465) MGI PMID:18480465 MGI:3814796 NCBI chrNW_004936581:2,031,894...2,042,294 JBrowse link
G Sf3b4 splicing factor 3b subunit 4 acts_upstream_of_or_within ISO (MGI:5532638|PMID:23636947) MGI PMID:23636947 MGI:5532638 NCBI chrNW_004936580:260,013...265,057 JBrowse link
G Slc39a5 solute carrier family 39 member 5 acts_upstream_of_or_within ISO (MGI:5532638|PMID:23636947) MGI PMID:23636947 MGI:5532638 NCBI chrNW_004936646:638,956...649,501 JBrowse link
G Snrnp70 small nuclear ribonucleoprotein U1 subunit 70 acts_upstream_of_or_within ISO (MGI:5532638|PMID:23636947) MGI PMID:23636947 MGI:5532638 NCBI chrNW_004936664:3,035,679...3,054,577 JBrowse link
G Snw1 SNW domain containing 1 involved_in ISO (PMID:12840015) UniProt PMID:12840015 NCBI chrNW_004936488:6,494,556...6,531,297 JBrowse link
G Thrap3 thyroid hormone receptor associated protein 3 involved_in ISO (PMID:20123736) UniProt PMID:20123736 NCBI chrNW_004936474:18,691,872...18,749,217 JBrowse link
G Tra2a transformer 2 alpha homolog acts_upstream_of_or_within ISO (MGI:5304203|PMID:22194695) MGI PMID:22194695 MGI:5304203 NCBI chrNW_004936478:622,527...642,529 JBrowse link
G Tra2b transformer 2 beta homolog involved_in
acts_upstream_of_or_within
ISO (PMID:15009664)
(MGI:5304203|PMID:22194695)
UniProt
MGI
PMID:15009664 PMID:22194695 MGI:5304203 NCBI chrNW_004936578:3,949,820...3,970,462 JBrowse link
G Zfp64 ZFP64 zinc finger protein acts_upstream_of_or_within ISO (MGI:5532638|PMID:23636947) MGI PMID:23636947 MGI:5532638 NCBI chrNW_004936514:3,028,526...3,100,294 JBrowse link
positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago2 argonaute RISC catalytic component 2 involved_in ISO (MGI:5486537|PMID:19716330) UniProt PMID:19716330 MGI:5486537 NCBI chrNW_004936470:10,641,109...10,690,587 JBrowse link
G Cnot1 CCR4-NOT transcription complex subunit 1 involved_in ISO (PMID:21278420) UniProt PMID:21278420 NCBI chrNW_004936475:10,302,091...10,384,945 JBrowse link
G Cnot7 CCR4-NOT transcription complex subunit 7 involved_in ISO (PMID:21278420)
(MGI:5486537|PMID:19716330)
UniProt PMID:19716330 PMID:21278420 MGI:5486537 NCBI chrNW_004936573:6,288,397...6,305,984 JBrowse link
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO (PMID:21336257) UniProt PMID:21336257 NCBI chrNW_004936601:2,470,021...2,616,451 JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in ISO (PMID:14731398) UniProt PMID:14731398 NCBI chrNW_004936519:1,946,684...1,987,036 JBrowse link
G Nanos2 nanos C2HC-type zinc finger 2 involved_in ISO (PMID:24736845) BHF-UCL PMID:24736845 NCBI chrNW_004936706:2,232,265...2,232,657 JBrowse link
G Nanos3 nanos C2HC-type zinc finger 3 involved_in ISO (PMID:24736845) BHF-UCL PMID:24736845 NCBI chrNW_004936659:2,590,291...2,593,482 JBrowse link
G Pabpc1 poly(A) binding protein cytoplasmic 1 involved_in ISO (MGI:5486537|PMID:19716330) UniProt PMID:19716330 MGI:5486537 NCBI chrNW_004936470:42,628,890...42,670,311 JBrowse link
G Tnrc6b trinucleotide repeat containing adaptor 6B involved_in ISO (PMID:19716330) UniProt PMID:19716330 NCBI chrNW_004936492:1,461,572...1,697,500 JBrowse link
G Tnrc6c trinucleotide repeat containing adaptor 6C involved_in ISO (PMID:21984185) UniProt PMID:21984185 NCBI chrNW_004936594:2,656,079...2,741,254 JBrowse link
G Tob1 transducer of ERBB2, 1 involved_in ISO (PMID:21336257) UniProt PMID:21336257 NCBI chrNW_004936490:10,876,113...10,880,267 JBrowse link
G Zfp36 ZFP36 ring finger protein involved_in ISO (PMID:12748283)
(MGI:5487524|PMID:21278420)
UniProt PMID:12748283 PMID:21278420 MGI:5487524 NCBI chrNW_004936661:2,251,148...2,253,527 JBrowse link
G Zfp36l1 ZFP36 ring finger protein like 1 involved_in ISO PMID:12748283 UniProt PMID:12748283 RGD:11344945 NCBI chrNW_004936495:12,045,679...12,050,737 JBrowse link
G Zfp36l2 ZFP36 ring finger protein like 2 involved_in ISO (MGI:5320815|PMID:22367205) UniProt PMID:22367205 MGI:5320815 NCBI chrNW_004936508:8,617,185...8,620,823 JBrowse link
positive regulation of nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ago2 argonaute RISC catalytic component 2 involved_in ISO (MGI:5486537|PMID:19716330) UniProt PMID:19716330 MGI:5486537 NCBI chrNW_004936470:10,641,109...10,690,587 JBrowse link
G Btg2 BTG anti-proliferation factor 2 acts_upstream_of_or_within ISO (PMID:18337750) MGI PMID:18337750 NCBI chrNW_004936567:1,310,525...1,314,469 JBrowse link
G Cnot1 CCR4-NOT transcription complex subunit 1 involved_in ISO (PMID:23644599)
(PMID:21278420)
BHF-UCL
UniProt
PMID:21278420 PMID:23644599 NCBI chrNW_004936475:10,302,091...10,384,945 JBrowse link
G Cnot7 CCR4-NOT transcription complex subunit 7 involved_in ISO (PMID:21278420)
(MGI:5486537|PMID:19716330)
UniProt PMID:19716330 PMID:21278420 MGI:5486537 NCBI chrNW_004936573:6,288,397...6,305,984 JBrowse link
G Cpeb3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO (PMID:21336257) UniProt PMID:21336257 NCBI chrNW_004936601:2,470,021...2,616,451 JBrowse link
G Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in ISO (PMID:32354837) UniProt PMID:32354837 NCBI chrNW_004936755:586,366...635,294 JBrowse link
G Pabpc1 poly(A) binding protein cytoplasmic 1 involved_in ISO (MGI:5486537|PMID:19716330) UniProt PMID:19716330 MGI:5486537 NCBI chrNW_004936470:42,628,890...42,670,311 JBrowse link
G Tnrc6b trinucleotide repeat containing adaptor 6B involved_in ISO (PMID:19716330) UniProt PMID:19716330 NCBI chrNW_004936492:1,461,572...1,697,500 JBrowse link
G Tnrc6c trinucleotide repeat containing adaptor 6C involved_in ISO (PMID:21984185) UniProt PMID:21984185 NCBI chrNW_004936594:2,656,079...2,741,254 JBrowse link
G Tob1 transducer of ERBB2, 1 involved_in ISO (PMID:21336257) UniProt PMID:21336257 NCBI chrNW_004936490:10,876,113...10,880,267 JBrowse link
G Zfp36 ZFP36 ring finger protein involved_in ISO (PMID:10330172)
(MGI:5487524|PMID:21278420)
(MGI:5795819|PMID:20595389)
UniProt PMID:10330172 PMID:20595389 PMID:21278420 MGI:5487524 MGI:5795819 NCBI chrNW_004936661:2,251,148...2,253,527 JBrowse link
positive regulation of nuclease activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmgb2 high mobility group box 2 involved_in ISO (PMID:978439) UniProt PMID:978439 NCBI chrNW_004936516:4,536,664...4,539,331 JBrowse link
positive regulation of nucleic acid-templated transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zmiz1 zinc finger MIZ-type containing 1 involved_in ISO (PMID:14609956), (PMID:16777850) UniProt PMID:14609956 PMID:16777850 NCBI chrNW_004936521:444,599...664,533 JBrowse link
positive regulation of pri-miRNA transcription by RNA polymerase II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apln apelin involved_in ISO (PMID:23263626) BHF-UCL PMID:23263626 NCBI chrNW_004936479:1,889,930...1,899,811 JBrowse link
G Atoh8 atonal bHLH transcription factor 8 involved_in ISO (PMID:27780851) BHF-UCL PMID:27780851 NCBI chrNW_004936712:1,529,508...1,552,148 JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in ISO (MGI:4939577|PMID:21145505) BHF-UCL PMID:21145505 MGI:4939577 NCBI chrNW_004936485:12,428,765...12,439,570 JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in ISO (MGI:4939577|PMID:21145505) BHF-UCL PMID:21145505 MGI:4939577 NCBI chrNW_004936697:1,054,237...1,061,468 JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A involved_in ISO (MGI:4939577|PMID:21145505) BHF-UCL PMID:21145505 MGI:4939577 NCBI chrNW_004936804:52,435...115,289 JBrowse link
G Ctcf CCCTC-binding factor involved_in ISO PMID:27124358 BHF-UCL PMID:27124358 RGD:11344932 NCBI chrNW_004936475:17,987,137...18,031,733 JBrowse link
G Egr1 early growth response 1 involved_in ISO (PMID:19307576) ARUK-UCL PMID:19307576 NCBI chrNW_004936531:7,625,956...7,629,041 JBrowse link
G Ets1 ETS proto-oncogene 1, transcription factor involved_in ISO (PMID:21711453) BHF-UCL PMID:21711453 NCBI chrNW_004936572:3,728,971...3,795,612 JBrowse link
G Fos Fos proto-oncogene, AP-1 transcription factor subunit involved_in ISO PMID:18384814 BHF-UCL PMID:18384814 RGD:10402042 NCBI chrNW_004936488:4,384,710...4,388,118 JBrowse link
G Fosl1 FOS like 1, AP-1 transcription factor subunit involved_in ISO (PMID:21673316) BHF-UCL PMID:21673316 NCBI chrNW_004936599:3,642,504...3,649,294 JBrowse link
G Foxo3 forkhead box O3 involved_in ISO (MGI:4881905|PMID:19933931) BHF-UCL PMID:19933931 MGI:4881905 NCBI chrNW_004936564:4,788,036...4,907,600 JBrowse link
G Gata2 GATA binding protein 2 involved_in ISO (PMID:27780851) BHF-UCL PMID:27780851 NCBI chrNW_004936798:406,258...414,785 JBrowse link
G Gata3 GATA binding protein 3 involved_in ISO (PMID:26451614) BHF-UCL PMID:26451614 NCBI chrNW_004936484:6,780,692...6,800,883 JBrowse link
G Gnl3 G protein nucleolar 3 involved_in ISO (PMID:25569094) BHF-UCL PMID:25569094 NCBI chrNW_004936473:3,476,436...3,483,868 JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in ISO (PMID:19782034)
(PMID:19141645), (PMID:24983504), (PMID:33108349)
ARUK-UCL
BHF-UCL
PMID:19141645 PMID:19782034 PMID:24983504 PMID:33108349 NCBI chrNW_004936495:5,770,988...5,816,157 JBrowse link
G Il10 interleukin 10 involved_in ISO (PMID:23071313) ARUK-UCL PMID:23071313 NCBI chrNW_004936557:5,834,874...5,838,502 JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit involved_in ISO (PMID:19962668), (PMID:24375836)
PMID:18384814
BHF-UCL PMID:18384814 PMID:19962668 PMID:24375836 RGD:10402042 NCBI chrNW_004936522:3,034,364...3,037,632 JBrowse link
G Klf4 Kruppel like factor 4 involved_in ISO (PMID:23867820) BHF-UCL PMID:23867820 NCBI chrNW_004936559:5,105,456...5,109,970 JBrowse link
G Klf5 Kruppel like factor 5 involved_in ISO (PMID:28408180) BHF-UCL PMID:28408180 NCBI chrNW_004936511:7,806,714...7,824,833 JBrowse link
G Mrtfa myocardin related transcription factor A involved_in ISO (PMID:23764775) ARUK-UCL PMID:23764775 NCBI chrNW_004936492:1,234,025...1,384,838 JBrowse link
G Mrtfb myocardin related transcription factor B involved_in ISO (PMID:23764775) ARUK-UCL PMID:23764775 NCBI chrNW_004936501:2,414,696...2,571,627 JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 involved_in ISO PMID:24676391 BHF-UCL PMID:24676391 RGD:10400879 NCBI chrNW_004936520:733,760...850,563 JBrowse link
G Ngfr nerve growth factor receptor involved_in ISO (PMID:26268439) BHF-UCL PMID:26268439 NCBI chrNW_004936490:12,038,500...12,057,257 JBrowse link
G Nr3c1 nuclear receptor subfamily 3 group C member 1 involved_in ISO (PMID:27334923)
(MGI:5616008|PMID:25510864)
ARUK-UCL
BHF-UCL
PMID:25510864 PMID:27334923 MGI:5616008 NCBI chrNW_004936504:10,960,069...11,056,834 JBrowse link
G Pdgfb platelet derived growth factor subunit B involved_in ISO (PMID:19088079) BHF-UCL PMID:19088079 NCBI chrNW_004936492:2,353,840...2,368,573 JBrowse link
G Pparg peroxisome proliferator activated receptor gamma involved_in ISO (PMID:28566713) BHF-UCL PMID:28566713 NCBI chrNW_004936602:1,230,907...1,368,588 JBrowse link
G Prl prolactin involved_in ISO (PMID:23619365) BHF-UCL PMID:23619365 NCBI chrNW_004936552:7,204,298...7,212,632 JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in ISO (PMID:23619365), (PMID:26268439)
PMID:28484848
PMID:20546595
BHF-UCL PMID:20546595 PMID:23619365 PMID:26268439 PMID:28484848 RGD:12903243 RGD:13601996 NCBI chrNW_004936599:3,800,142...3,810,583 JBrowse link
G Smad1 SMAD family member 1 involved_in ISO (MGI:4939577|PMID:21145505) BHF-UCL PMID:21145505 MGI:4939577 NCBI chrNW_004936535:3,582,512...3,626,312 JBrowse link
G Smad3 SMAD family member 3 involved_in ISO (PMID:26311719) BHF-UCL PMID:26311719 NCBI chrNW_004936471:27,080,662...27,185,861 JBrowse link
G Smad4 SMAD family member 4 involved_in ISO (MGI:6094665|PMID:23426367) BHF-UCL PMID:23426367 MGI:6094665 NCBI chrNW_004936497:12,242,869...12,278,012 JBrowse link
G Smad6 SMAD family member 6 involved_in ISO (MGI:4939577|PMID:21145505) BHF-UCL PMID:21145505 MGI:4939577 NCBI chrNW_004936471:26,781,420...26,856,556 JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 involved_in ISO (PMID:25569094) BHF-UCL PMID:25569094 NCBI chrNW_004936659:1,152,846...1,246,718 JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO (PMID:20972335)
(MGI:5693226|PMID:18384814)
BHF-UCL PMID:18384814 PMID:20972335 MGI:5693226 NCBI chrNW_004936562:1,852,759...1,870,647 JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 involved_in ISO (PMID:24296663)
(MGI:5501359|PMID:23823476)
BHF-UCL PMID:23823476 PMID:24296663 MGI:5501359 NCBI chrNW_004936741:1,408,669...1,419,717 JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 involved_in ISO (MGI:5501359|PMID:23823476) BHF-UCL PMID:23823476 MGI:5501359 NCBI chrNW_004936492:115,923...174,614 JBrowse link
G Srf serum response factor involved_in ISO (MGI:4354665|PMID:19578358), (MGI:5688838|PMID:21303526)
(PMID:23764775)
BHF-UCL
ARUK-UCL
PMID:19578358 PMID:21303526 PMID:23764775 MGI:4354665 MGI:5688838 NCBI chrNW_004936476:16,779,941...16,789,499 JBrowse link
G Stat3 signal transducer and activator of transcription 3 involved_in ISO (PMID:19390056), (PMID:23820254)
(MGI:5897552|PMID:20546595)
BHF-UCL PMID:19390056 PMID:20546595 PMID:23820254 MGI:5897552 NCBI chrNW_004936490:17,119,189...17,178,402 JBrowse link
G Tead1 TEA domain transcription factor 1 involved_in ISO (PMID:26045994) BHF-UCL PMID:26045994 NCBI chrNW_004936528:5,607,993...5,774,161 JBrowse link
G Tert telomerase reverse transcriptase involved_in ISO (PMID:25569094) BHF-UCL PMID:25569094 NCBI chrNW_004936815:468,987...492,666 JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in ISO (PMID:26311719), (PMID:26493107) BHF-UCL PMID:26311719 PMID:26493107 NCBI chrNW_004936661:3,742,080...3,758,266 JBrowse link
G Tgfb2 transforming growth factor beta 2 involved_in ISO (PMID:25217442) BHF-UCL PMID:25217442 NCBI chrNW_004936628:310,720...394,002 JBrowse link
G Tgfbr1 transforming growth factor beta receptor 1 involved_in ISO PMID:21704009 BHF-UCL PMID:21704009 RGD:12792988 NCBI chrNW_004936524:7,656,523...7,680,043 JBrowse link
G Tnf tumor necrosis factor acts_upstream_of ISO (PMID:22499991) BHF-UCL PMID:22499991 NCBI chrNW_004936727:1,936,066...1,937,766 JBrowse link
G Tp53 tumor protein p53 involved_in ISO (PMID:20546595)
(PMID:22499991)
BHF-UCL PMID:20546595 PMID:22499991 NCBI chrNW_004936595:919,807...935,367 JBrowse link
G Wt1 WT1 transcription factor involved_in ISO (PMID:23042785) ARUK-UCL PMID:23042785 NCBI chrNW_004936533:5,411,949...5,459,693 JBrowse link
positive regulation of production of miRNAs involved in gene silencing by miRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 involved_in ISO (PMID:18548003) BHF-UCL PMID:18548003 NCBI chrNW_004936697:1,054,237...1,061,468 JBrowse link
G Ddx5 DEAD-box helicase 5 involved_in ISO (PMID:18548003) BHF-UCL PMID:18548003 NCBI chrNW_004936541:5,005,211...5,013,439 JBrowse link
G Egfr epidermal growth factor receptor involved_in ISO (PMID:21673316) BHF-UCL PMID:21673316 NCBI chrNW_004936678:365,005...560,546 JBrowse link
G Il6 interleukin 6 acts_upstream_of_or_within ISO (PMID:27252421) ARUK-UCL PMID:27252421 NCBI chrNW_004936549:7,015,595...7,016,246 JBrowse link
G Lin28a lin-28 homolog A involved_in ISO (MGI:5294254|PMID:21962509) BHF-UCL PMID:21962509 MGI:5294254 NCBI chrNW_004936474:10,896,153...10,909,247 JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 involved_in ISO (PMID:24375836) BHF-UCL PMID:24375836 NCBI chrNW_004936471:26,589,251...26,628,302 JBrowse link
G Map2k2 mitogen-activated protein kinase kinase 2 involved_in ISO (PMID:24375836) BHF-UCL PMID:24375836 NCBI chrNW_004936588:2,338,127...2,377,090 JBrowse link
G Myocd myocardin involved_in ISO (MGI:6414695|PMID:28342807) ARUK-UCL PMID:28342807 MGI:6414695 NCBI chrNW_004936595:5,256,615...5,356,563 JBrowse link
G Nr2f1 nuclear receptor subfamily 2 group F member 1 acts_upstream_of_or_within ISO (MGI:5574156|PMID:24349493) MGI PMID:24349493 MGI:5574156 NCBI chrNW_004936523:9,508,204...9,517,266 JBrowse link
G Ripk1 receptor interacting serine/threonine kinase 1 involved_in ISO (PMID:26020802) ARUK-UCL PMID:26020802 NCBI chrNW_004936534:9,326,307...9,361,943 JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in ISO (PMID:18548003) BHF-UCL PMID:18548003 NCBI chrNW_004936661:3,742,080...3,758,266 JBrowse link
G Tp53 tumor protein p53 involved_in ISO (PMID:22578566)
(PMID:26100857)
ARUK-UCL
BHF-UCL
PMID:22578566 PMID:26100857 NCBI chrNW_004936595:919,807...935,367 JBrowse link
positive regulation of reciprocal meiotic recombination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rad51ap1 RAD51 associated protein 1 involved_in ISO (PMID:17996711) UniProt PMID:17996711 NCBI chrNW_004936606:4,697,369...4,716,006 JBrowse link
G Ube2b ubiquitin conjugating enzyme E2 B acts_upstream_of_or_within ISO (MGI:2450033|PMID:12556476) MGI PMID:12556476 MGI:2450033 NCBI chrNW_004936647:891,357...913,963 JBrowse link
positive regulation of RNA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il1b interleukin 1 beta involved_in ISO (PMID:29384235) ARUK-UCL PMID:29384235 NCBI chrNW_004936783:1,251,678...1,256,807 JBrowse link
G Nmd3 NMD3 ribosome export adaptor involved_in ISO (PMID:23782956) ParkinsonsUK-UCL PMID:23782956 NCBI chrNW_004936708:1,171,891...1,198,506 JBrowse link
positive regulation of RNA polymerase II transcription preinitiation complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahr aryl hydrocarbon receptor acts_upstream_of_or_within ISO (MGI:62922|PMID:8215422) MGI PMID:8215422 MGI:62922 NCBI chrNW_004936546:3,737,908...3,783,492 JBrowse link
G Cand1 cullin associated and neddylation dissociated 1 involved_in ISO PMID:10567521 UniProt PMID:10567521 RGD:8553447 NCBI chrNW_004936545:5,217,947...5,255,596 JBrowse link
G Creb1 cAMP responsive element binding protein 1 ISO RGD PMID:16891311 RGD:1625706 NCBI chrNW_004936631:3,721,307...3,785,346 JBrowse link
G Esr1 estrogen receptor 1 involved_in ISO (PMID:9841876) CAFA PMID:9841876 NCBI chrNW_004936489:4,616,839...4,887,179 JBrowse link
G Ikzf1 IKAROS family zinc finger 1 acts_upstream_of_or_within ISO (MGI:5317044|PMID:21245044) MGI PMID:21245044 MGI:5317044 NCBI chrNW_004936686:1,459,582...1,556,478 JBrowse link
G Tp53 tumor protein p53 involved_in ISO (PMID:24289924) BHF-UCL PMID:24289924 NCBI chrNW_004936595:919,807...935,367 JBrowse link
G Wnt10b Wnt family member 10B acts_upstream_of_or_within ISO (MGI:3820325|PMID:19056892) MGI PMID:19056892 MGI:3820325 NCBI chrNW_004936512:6,768,240...6,774,172 JBrowse link
positive regulation of RNA splicing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A involved_in ISO (PMID:28377597) ARUK-UCL PMID:28377597 RGD:13464257 NCBI chrNW_004936500:5,317,109...5,423,593 JBrowse link
G Ern1 endoplasmic reticulum to nucleus signaling 1 involved_in ISO (PMID:11779464), (PMID:19622636)
(MGI:6114871|PMID:25164867)
UniProt PMID:11779464 PMID:19622636 PMID:25164867 MGI:6114871 NCBI chrNW_004936541:4,613,197...4,705,911 JBrowse link
G Habp4 hyaluronan binding protein 4 involved_in ISO (PMID:19523114) UniProt PMID:19523114 NCBI chrNW_004936487:402,701...424,399 JBrowse link
G Hnrnpk heterogeneous nuclear ribonucleoprotein K ISO RGD PMID:22684629 RGD:10002775 NCBI chrNW_004936828:827,660...839,088 JBrowse link
G Hnrnpll heterogeneous nuclear ribonucleoprotein L like involved_in ISO (PMID:18669861) UniProt PMID:18669861 NCBI chrNW_004936508:12,653,861...12,680,816 JBrowse link
G Khdrbs3 KH RNA binding domain containing, signal transduction associated 3 ISO RGD PMID:11118435 RGD:632715 NCBI chrNW_004936470:14,232,114...14,403,910 JBrowse link
G LOC101955831 heat shock 70 kDa protein 1 involved_in ISO (PMID:20625543) ParkinsonsUK-UCL PMID:20625543 NCBI chrNW_004936727:1,718,952...1,721,691 JBrowse link
G LOC101956126 heat shock 70 kDa protein 1 involved_in ISO (PMID:20625543) ParkinsonsUK-UCL PMID:20625543 NCBI chrNW_004936727:1,732,323...1,735,128 JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 involved_in ISO (PMID:20348923) UniProt PMID:20348923 NCBI chrNW_004936480:1,188,408...1,273,210 JBrowse link
G Polr2a RNA polymerase II subunit A involved_in ISO (PMID:21536736) UniProt PMID:21536736 NCBI chrNW_004936595:755,585...781,692 JBrowse link
G Rbm20 RNA binding motif protein 20 involved_in ISO (PMID:22466703)
(MGI:5442495|PMID:22466703)
UniProt PMID:22466703 MGI:5442495 RGD:7241566 NCBI chrNW_004936486:1,472,170...1,652,314 JBrowse link
G Rbm22 RNA binding motif protein 22 involved_in ISO (PMID:22246180) UniProt PMID:22246180 NCBI chrNW_004936504:4,294,010...4,304,669 JBrowse link
G Setx senataxin involved_in ISO (PMID:19515850) UniProt PMID:19515850 NCBI chrNW_004936487:18,858,384...18,945,253 JBrowse link
G Slc38a2 solute carrier family 38 member 2 involved_in ISO (PMID:22215663) ARUK-UCL PMID:22215663 NCBI chrNW_004936512:4,543,845...4,557,118 JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 ISO RGD PMID:16308321 RGD:11038784 NCBI chrNW_004936490:5,055,258...5,059,118 JBrowse link
G Srsf5 serine and arginine rich splicing factor 5 ISO RGD PMID:9199345 RGD:11039429 NCBI chrNW_004936495:12,952,610...12,957,640 JBrowse link
G U2af2 U2 small nuclear RNA auxiliary factor 2 involved_in ISO (PMID:21536736) UniProt PMID:21536736 NCBI chrNW_004936981:176,552...193,798 JBrowse link
G Zpr1 ZPR1 zinc finger involved_in ISO (PMID:11283611) UniProt PMID:11283611 NCBI chrNW_004936542:2,058,048...2,067,468 JBrowse link
positive regulation of rRNA processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bud23 BUD23 rRNA methyltransferase and ribosome maturation factor involved_in ISO (PMID:25851604) UniProt PMID:25851604 NCBI chrNW_004936543:2,897,884...2,908,758 JBrowse link
G Dimt1 DIM1 rRNA methyltransferase and ribosome maturation factor involved_in ISO (PMID:25851604) UniProt PMID:25851604 NCBI chrNW_004936480:6,311,389...6,323,156 JBrowse link
G Heatr1 HEAT repeat containing 1 involved_in ISO (PMID:17699751) UniProt PMID:17699751 NCBI chrNW_004936484:16,310,766...16,355,977 JBrowse link
G Riok1 RIO kinase 1 involved_in ISO (PMID:22072790) UniProt PMID:22072790 NCBI chrNW_004936534:5,184,313...5,220,565 JBrowse link
G Riok2 RIO kinase 2 involved_in ISO (PMID:19564402) UniProt PMID:19564402 NCBI chrNW_004936523:6,293,735...6,313,840 JBrowse link
G Sirt7 sirtuin 7 involved_in ISO (PMID:26867678) UniProt PMID:26867678 NCBI chrNW_004936594:5,418,331...5,425,050 JBrowse link
G Trmt112 tRNA methyltransferase activator subunit 11-2 involved_in ISO (PMID:25851604) UniProt PMID:25851604 NCBI chrNW_004936599:4,897,394...4,898,618 JBrowse link
G Utp15 UTP15 small subunit processome component involved_in ISO (PMID:17699751) UniProt PMID:17699751 NCBI chrNW_004936549:3,010,676...3,023,362 JBrowse link
G Wdr43 WD repeat domain 43 involved_in ISO (PMID:17699751) UniProt PMID:17699751 NCBI chrNW_004936493:3,871,167...3,914,172 JBrowse link
G Wdr75 WD repeat domain 75 involved_in ISO (PMID:17699751) UniProt PMID:17699751 NCBI chrNW_004936506:8,502,795...8,529,305 JBrowse link
positive regulation of single strand break repair term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Parp1 poly(ADP-ribose) polymerase 1 involved_in ISO (PMID:28002403)
(MGI:5902647|PMID:28002403)
UniProt PMID:28002403 MGI:5902647 NCBI chrNW_004936526:3,102,468...3,147,601 JBrowse link
G Xrcc1 X-ray repair cross complementing 1 involved_in ISO (PMID:28002403)
(MGI:5902647|PMID:28002403)
UniProt PMID:28002403 MGI:5902647 NCBI chrNW_004936706:752,571...783,746 JBrowse link
positive regulation of snRNA transcription by RNA polymerase II term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Larp7 La ribonucleoprotein 7, transcriptional regulator involved_in ISO (PMID:28254838) UniProt PMID:28254838 NCBI chrNW_004936563:3,455,205...3,474,955 JBrowse link
G Mepce methylphosphate capping enzyme involved_in ISO (PMID:28254838) UniProt PMID:28254838 NCBI chrNW_004936543:504,686...509,419 JBrowse link
G Myod1 myogenic differentiation 1 involved_in ISO (MGI:6148658|PMID:25217815) UniProt PMID:25217815 MGI:6148658 NCBI chrNW_004936528:1,407,187...1,409,683 JBrowse link
G Znf143 zinc finger protein 143 involved_in ISO (PMID:9009278) GO_Central PMID:9009278 NCBI chrNW_004936528:8,614,393...8,676,301 JBrowse link
positive regulation of strand invasion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wrn WRN RecQ like helicase involved_in ISO (PMID:26420422) BHF-UCL PMID:26420422 NCBI chrNW_004936792:862,659...1,005,065 JBrowse link
positive regulation of t-circle formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit involved_in ISO (MGI:5645200|PMID:22579284) BHF-UCL PMID:22579284 MGI:5645200 NCBI chrNW_004936706:1,854,938...1,867,521 JBrowse link
G Slx1a SLX1 homolog A, structure-specific endonuclease subunit involved_in ISO (MGI:5645200|PMID:22579284) BHF-UCL PMID:22579284 MGI:5645200 NCBI chrNW_004936501:12,332,135...12,335,081 JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit involved_in ISO (MGI:5645200|PMID:22579284) BHF-UCL PMID:22579284 MGI:5645200 NCBI chrNW_004936694:720,585...744,477 JBrowse link
positive regulation of telomerase activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acd ACD shelterin complex subunit and telomerase recruitment factor involved_in ISO (PMID:17237768) BHF-UCL PMID:17237768 NCBI chrNW_004936475:18,049,134...18,052,123 JBrowse link
G Aurkb aurora kinase B involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004936595:1,435,601...1,437,423 JBrowse link
G Cct2 chaperonin containing TCP1 subunit 2 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004936545:7,416,257...7,436,024 JBrowse link
G Cct4 chaperonin containing TCP1 subunit 4 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004936491:7,224,989...7,241,348 JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of ISO (MGI:5428344|PMID:22723415) BHF-UCL PMID:22723415 MGI:5428344 NCBI chrNW_004936473:29,999,542...30,034,610 JBrowse link
G Dkc1 dyskerin pseudouridine synthase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:25467444)
(MGI:3047190|PMID:15240872)
BHF-UCL
MGI
PMID:15240872 PMID:25467444 MGI:3047190 NCBI chrNW_004936927:134,770...144,057 JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in ISO (PMID:16545136) BHF-UCL PMID:16545136 NCBI chrNW_004936673:1,394,743...1,399,726 JBrowse link
G Grhl2 grainyhead like transcription factor 2 involved_in ISO (PMID:19015635), (PMID:20938050) UniProt PMID:19015635 PMID:20938050 NCBI chrNW_004936470:41,856,683...41,961,666 JBrowse link
G Hmbox1 homeobox containing 1 involved_in ISO (PMID:23685356) BHF-UCL PMID:23685356 NCBI chrNW_004936675:1,578,705...1,741,283 JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 involved_in ISO (PMID:10197982) BHF-UCL PMID:10197982 NCBI chrNW_004936835:316,767...321,999 JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 involved_in ISO (PMID:10197982) BHF-UCL PMID:10197982 NCBI chrNW_004936476:15,830,459...15,836,994 JBrowse link
G Klf4 Kruppel like factor 4 involved_in ISO (PMID:20629177) BHF-UCL PMID:20629177 NCBI chrNW_004936559:5,105,456...5,109,970 JBrowse link
G LOC101966755 polynucleotide kinase 3'-phosphatase involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004936664:3,649,020...3,656,545 JBrowse link
G Map2k7 mitogen-activated protein kinase kinase 7 involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004936588:4,882,191...4,891,807 JBrowse link
G Map3k4 mitogen-activated protein kinase kinase kinase 4 involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004936489:11,908,083...11,972,186 JBrowse link
G Mapk1 mitogen-activated protein kinase 1 involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004936619:1,889,841...1,932,646 JBrowse link
G Mapk15 mitogen-activated protein kinase 15 involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004936470:8,420,850...8,425,996 JBrowse link
G Mapk3 mitogen-activated protein kinase 3 involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004936501:12,342,670...12,390,650 JBrowse link
G Mapkapk5 MAPK activated protein kinase 5 involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004936558:4,414,283...4,448,291 JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor involved_in ISO (MGI:5810267|PMID:9637678) BHF-UCL PMID:9637678 MGI:5810267 NCBI chrNW_004936470:20,480,844...20,485,955 JBrowse link
G Naf1 nuclear assembly factor 1 ribonucleoprotein involved_in ISO (PMID:27510903) BHF-UCL PMID:27510903 NCBI chrNW_004936555:2,392,202...2,428,857 JBrowse link
G Nek2 NIMA related kinase 2 involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004936557:1,683,027...1,695,410 JBrowse link
G Nek7 NIMA related kinase 7 involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004936567:5,685,619...5,815,094 JBrowse link
G Nvl nuclear VCP like involved_in ISO (PMID:22226966) UniProt PMID:22226966 NCBI chrNW_004936526:1,274,760...1,381,997 JBrowse link
G Parm1 prostate androgen-regulated mucin-like protein 1 involved_in ISO PMID:12772192 UniProt PMID:12772192 RGD:8553456 NCBI chrNW_004936598:761,261...864,459 JBrowse link
G Parn poly(A)-specific ribonuclease involved_in ISO (PMID:26482878) BHF-UCL PMID:26482878 NCBI chrNW_004936501:2,666,908...2,810,159 JBrowse link
G Pkib cAMP-dependent protein kinase inhibitor beta involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004936802:1,130,341...1,236,715 JBrowse link
G Pot1 protection of telomeres 1 involved_in ISO (PMID:15181449)
(PMID:16043710), (PMID:17237768)
BHF-UCL PMID:15181449 PMID:16043710 PMID:17237768 NCBI chrNW_004936605:836,824...919,099 JBrowse link
G Prkcq protein kinase C theta involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004936484:8,048,239...8,166,058 JBrowse link
G Ptges3 prostaglandin E synthase 3 involved_in ISO (PMID:10197982), (PMID:19740745)
(MGI:5819359|PMID:10197982)
(PMID:19740745)
BHF-UCL PMID:10197982 PMID:19740745 MGI:5819359 NCBI chrNW_004936646:969,674...990,532 JBrowse link
G Tcp1 t-complex 1 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004936489:11,273,335...11,282,811 JBrowse link
G Tnks tankyrase involved_in ISO (PMID:12782650) BHF-UCL PMID:12782650 NCBI chrNW_004936573:788,909...993,453 JBrowse link
G Wrap53 WD repeat containing antisense to TP53 involved_in ISO (PMID:23685356), (PMID:25467444)
(MGI:6189679|PMID:29804836)
(PMID:19179534), (PMID:23685356), (PMID:29804836)
BHF-UCL
UniProt
PMID:19179534 PMID:23685356 PMID:25467444 PMID:29804836 MGI:6189679 NCBI chrNW_004936595:936,184...952,784 JBrowse link
positive regulation of telomere capping term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aurkb aurora kinase B involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004936595:1,435,601...1,437,423 JBrowse link
G Hnrnpd heterogeneous nuclear ribonucleoprotein D involved_in ISO (MGI:5438900|PMID:22633954) BHF-UCL PMID:22633954 MGI:5438900 NCBI chrNW_004936738:2,096,370...2,115,135 JBrowse link
G LOC101966755 polynucleotide kinase 3'-phosphatase involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004936664:3,649,020...3,656,545 JBrowse link
G Map2k7 mitogen-activated protein kinase kinase 7 involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004936588:4,882,191...4,891,807 JBrowse link
G Map3k4 mitogen-activated protein kinase kinase kinase 4 involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004936489:11,908,083...11,972,186 JBrowse link
G Mapk1 mitogen-activated protein kinase 1 involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004936619:1,889,841...1,932,646 JBrowse link
G Mapk15 mitogen-activated protein kinase 15 involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004936470:8,420,850...8,425,996 JBrowse link
G Mapk3 mitogen-activated protein kinase 3 involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004936501:12,342,670...12,390,650 JBrowse link
G Mapkapk5 MAPK activated protein kinase 5 involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004936558:4,414,283...4,448,291 JBrowse link
G Nabp2 nucleic acid binding protein 2 involved_in ISO (PMID:25589350)
(MGI:5629774|PMID:25589350)
BHF-UCL PMID:25589350 MGI:5629774 NCBI chrNW_004936646:632,390...638,900 JBrowse link
G Nek2 NIMA related kinase 2 involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004936557:1,683,027...1,695,410 JBrowse link
G Nek7 NIMA related kinase 7 involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004936567:5,685,619...5,815,094 JBrowse link
G Pkib cAMP-dependent protein kinase inhibitor beta involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004936802:1,130,341...1,236,715 JBrowse link
G Prkcq protein kinase C theta involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004936484:8,048,239...8,166,058 JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 involved_in ISO (PMID:23959892) BHF-UCL PMID:23959892 NCBI chrNW_004936514:10,920,979...10,954,483 JBrowse link
G Tnks tankyrase involved_in ISO (PMID:25939383)
(PMID:21531765)
BHF-UCL PMID:21531765 PMID:25939383 NCBI chrNW_004936573:788,909...993,453 JBrowse link
G Tnks2 tankyrase 2 involved_in ISO (PMID:21531765)
(PMID:25939383)
BHF-UCL PMID:21531765 PMID:25939383 NCBI chrNW_004936601:2,776,338...2,837,703 JBrowse link
positive regulation of telomere maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atrx ATRX chromatin remodeler involved_in ISO (MGI:4454526|PMID:20110566) UniProt PMID:20110566 MGI:4454526 NCBI chrNW_004936683:2,496,307...2,718,539 JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in ISO (PMID:22238380) UniProt PMID:22238380 NCBI chrNW_004936519:1,946,684...1,987,036 JBrowse link
G Gnl3 G protein nucleolar 3 involved_in ISO (PMID:22641345) BHF-UCL PMID:22641345 NCBI chrNW_004936473:3,476,436...3,483,868 JBrowse link
G Mre11 MRE11 homolog, double strand break repair nuclease involved_in ISO (PMID:16374507) BHF-UCL PMID:16374507 NCBI chrNW_004936674:466,495...528,072 JBrowse link
G Nbn nibrin involved_in ISO (PMID:16374507) BHF-UCL PMID:16374507 NCBI chrNW_004936544:3,773,828...3,812,673 JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (PMID:22641345), (PMID:26119943) BHF-UCL PMID:22641345 PMID:26119943 NCBI chrNW_004936471:33,135,186...33,173,218 JBrowse link
G Ppp1r10 protein phosphatase 1 regulatory subunit 10 involved_in ISO (PMID:23426265) BHF-UCL PMID:23426265 NCBI chrNW_004936837:276,423...296,600 JBrowse link
G Rad50 RAD50 double strand break repair protein involved_in ISO (PMID:16374507) BHF-UCL PMID:16374507 NCBI chrNW_004936647:2,546,100...2,637,524 JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 involved_in ISO (MGI:5645200|PMID:22579284) BHF-UCL PMID:22579284 MGI:5645200 NCBI chrNW_004936514:10,920,979...10,954,483 JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (PMID:23201774), (PMID:25819580) BHF-UCL PMID:23201774 PMID:25819580 NCBI chrNW_004936588:2,387,162...2,394,066 JBrowse link
G Terf2 telomeric repeat binding factor 2 acts_upstream_of_or_within ISO (MGI:3615734|PMID:15968270) MGI PMID:15968270 MGI:3615734 NCBI chrNW_004936475:19,469,501...19,498,494 JBrowse link
positive regulation of telomere maintenance via telomerase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acd ACD shelterin complex subunit and telomerase recruitment factor involved_in ISO (PMID:17237768) BHF-UCL PMID:17237768 NCBI chrNW_004936475:18,049,134...18,052,123 JBrowse link
G Atm ATM serine/threonine kinase involved_in ISO (MGI:5705431|PMID:26586427) BHF-UCL PMID:26586427 MGI:5705431 NCBI chrNW_004936551:359,134...534,672 JBrowse link
G Atr ATR serine/threonine kinase involved_in ISO (MGI:5705431|PMID:26586427) BHF-UCL PMID:26586427 MGI:5705431 NCBI chrNW_004936540:4,074,543...4,178,859 JBrowse link
G Aurkb aurora kinase B involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004936595:1,435,601...1,437,423 JBrowse link
G Cct2 chaperonin containing TCP1 subunit 2 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004936545:7,416,257...7,436,024 JBrowse link
G Cct3 chaperonin containing TCP1 subunit 3 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004936580:5,537,338...5,554,384 JBrowse link
G Cct4 chaperonin containing TCP1 subunit 4 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004936491:7,224,989...7,241,348 JBrowse link
G Cct5 chaperonin containing TCP1 subunit 5 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004936643:2,354,799...2,368,048 JBrowse link
G Cct6a chaperonin containing TCP1 subunit 6A involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004936543:7,887,511...7,900,174 JBrowse link
G Cct7 chaperonin containing TCP1 subunit 7 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004936491:17,017,687...17,033,526 JBrowse link
G Cct8 chaperonin containing TCP1 subunit 8 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004936500:12,949,563...12,962,699 JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of ISO (MGI:5428344|PMID:22723415) BHF-UCL PMID:22723415 MGI:5428344 NCBI chrNW_004936473:29,999,542...30,034,610 JBrowse link
G Dkc1 dyskerin pseudouridine synthase 1 acts_upstream_of_or_within ISO (MGI:3047190|PMID:15240872) MGI PMID:15240872 MGI:3047190 NCBI chrNW_004936927:134,770...144,057 JBrowse link
G Fbxo4 F-box protein 4 involved_in ISO (PMID:16275645) BHF-UCL PMID:16275645 NCBI chrNW_004936518:855,304...873,927 JBrowse link
G Hmbox1 homeobox containing 1 involved_in ISO (PMID:23685356) BHF-UCL PMID:23685356 NCBI chrNW_004936675:1,578,705...1,741,283 JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 involved_in ISO (PMID:23935072) BHF-UCL PMID:23935072 NCBI chrNW_004936512:11,481,017...11,487,737 JBrowse link
G LOC101966755 polynucleotide kinase 3'-phosphatase involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004936664:3,649,020...3,656,545 JBrowse link
G Map2k7 mitogen-activated protein kinase kinase 7 involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004936588:4,882,191...4,891,807 JBrowse link
G Map3k4 mitogen-activated protein kinase kinase kinase 4 involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004936489:11,908,083...11,972,186 JBrowse link
G Mapk1 mitogen-activated protein kinase 1 involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004936619:1,889,841...1,932,646 JBrowse link
G Mapk15 mitogen-activated protein kinase 15 involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004936470:8,420,850...8,425,996 JBrowse link
G Mapk3 mitogen-activated protein kinase 3 involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004936501:12,342,670...12,390,650 JBrowse link
G Mapkapk5 MAPK activated protein kinase 5 involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004936558:4,414,283...4,448,291 JBrowse link
G Nek2 NIMA related kinase 2 involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004936557:1,683,027...1,695,410 JBrowse link
G Nek7 NIMA related kinase 7 involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004936567:5,685,619...5,815,094 JBrowse link
G Parn poly(A)-specific ribonuclease involved_in ISO (PMID:26482878), (PMID:26950371) BHF-UCL PMID:26482878 PMID:26950371 NCBI chrNW_004936501:2,666,908...2,810,159 JBrowse link
G Pkib cAMP-dependent protein kinase inhibitor beta involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004936802:1,130,341...1,236,715 JBrowse link
G Pot1 protection of telomeres 1 involved_in ISO (PMID:12768206), (PMID:12781132)
(PMID:17237768)
BHF-UCL PMID:12768206 PMID:12781132 PMID:17237768 NCBI chrNW_004936605:836,824...919,099 JBrowse link
G Prkcq protein kinase C theta involved_in ISO (PMID:21531765) BHF-UCL PMID:21531765 NCBI chrNW_004936484:8,048,239...8,166,058 JBrowse link
G Tcp1 t-complex 1 involved_in ISO (PMID:25467444) BHF-UCL PMID:25467444 NCBI chrNW_004936489:11,273,335...11,282,811 JBrowse link
G Tnks tankyrase involved_in ISO (PMID:12782650), (PMID:18221737)
(PMID:11739745)
BHF-UCL PMID:11739745 PMID:12782650 PMID:18221737 NCBI chrNW_004936573:788,909...993,453 JBrowse link
G Xrcc5 X-ray repair cross complementing 5 involved_in ISO (PMID:19188702) BHF-UCL PMID:19188702 NCBI chrNW_004936586:1,055,478...1,137,924 JBrowse link
positive regulation of telomere maintenance via telomere lengthening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase involved_in ISO (PMID:17694070), (PMID:26586427) BHF-UCL PMID:17694070 PMID:26586427 NCBI chrNW_004936551:359,134...534,672 JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in ISO (PMID:21149580) UniProt PMID:21149580 NCBI chrNW_004936519:1,946,684...1,987,036 JBrowse link
G Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 involved_in ISO PMID:23184978 BHF-UCL PMID:23184978 RGD:11567256 NCBI chrNW_004936478:2,970,261...2,980,277 JBrowse link
G Naf1 nuclear assembly factor 1 ribonucleoprotein involved_in ISO (PMID:27510903) BHF-UCL PMID:27510903 NCBI chrNW_004936555:2,392,202...2,428,857 JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 involved_in ISO (PMID:23959892) BHF-UCL PMID:23959892 NCBI chrNW_004936514:10,920,979...10,954,483 JBrowse link
positive regulation of telomeric loop disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rtel1 regulator of telomere elongation helicase 1 involved_in ISO (MGI:5645200|PMID:22579284) BHF-UCL PMID:22579284 MGI:5645200 NCBI chrNW_004936514:10,920,979...10,954,483 JBrowse link
positive regulation of telomeric RNA transcription from RNA pol II promoter term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atrx ATRX chromatin remodeler involved_in ISO (PMID:26055325) BHF-UCL PMID:26055325 NCBI chrNW_004936683:2,496,307...2,718,539 JBrowse link
positive regulation of termination of RNA polymerase II transcription, poly(A)-coupled term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Setx senataxin involved_in ISO (PMID:21700224) UniProt PMID:21700224 NCBI chrNW_004936487:18,858,384...18,945,253 JBrowse link
positive regulation of transcription by glucose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Srf serum response factor ISO RGD PMID:20655308 RGD:5131625 NCBI chrNW_004936476:16,779,941...16,789,499 JBrowse link
positive regulation of transcription by RNA polymerase I term browser