ONTOLOGY REPORT - ANNOTATIONS
Term: positive regulation of ossification
Accession: GO:0045778
browse the term
Definition: Any process that activates or increases the frequency, rate or extent of ossification, the formation of bone or of a bony substance or the conversion of fibrous tissue or of cartilage into bone or a bony substance.
Synonyms: exact_synonym: positive regulation of bone biosynthesis; positive regulation of bone formation; up regulation of ossification; upregulation of ossification
narrow_synonym: activation of ossification; stimulation of ossification
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Bmp2
bone morphogenetic protein 2
involved_in
ISO
(PMID:9213002) (MGI:3575204|PMID:15820682), (MGI:4948784|PMID:21324897)
RGD
PMID:9213002 PMID:15820682 PMID:21324897
MGI:3575204 MGI:4948784
NCBI chr 3:126,335,963...126,346,771
Ensembl chr 3:126,335,863...126,346,318
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Bmp4
bone morphogenetic protein 4
involved_in
IMP IDA ISO
PMID:7911662 (PMID:14749725) (MGI:63654|PMID:8358941)
RGD
PMID:8358941 PMID:14749725 , PMID:17112416 , PMID:7911662 , PMID:7911662
MGI:63654 , RGD:1643600 , RGD:632977 , RGD:632977
NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
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Bmpr2
bone morphogenetic protein receptor type 2
ISO
(MGI:2429424|PMID:12441304)
RGD
PMID:12441304
MGI:2429424
NCBI chr 9:66,568,074...66,683,019
Ensembl chr 9:66,568,074...66,676,494
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Calca
calcitonin-related polypeptide alpha
ISO
MGI:2148538 (MGI:3653805|PMID:15537449)
RGD
PMID:15537449
MGI:3653805
NCBI chr 1:184,184,018...184,188,922
Ensembl chr 1:184,184,020...184,188,911
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Lrp6
LDL receptor related protein 6
ISO
MGI:2673982 (MGI:3055483|PMID:15469977)
RGD
PMID:15469977
MGI:3055483
NCBI chr 4:168,194,054...168,323,962
Ensembl chr 4:168,194,927...168,323,751
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Nell1
neural EGFL like 1
IMP
RGD
PMID:19493425
RGD:2314454
NCBI chr 1:105,348,577...106,218,970
Ensembl chr 1:105,349,069...106,218,958
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Nipbl
NIPBL, cohesin loading factor
ISO
MGI:4332250 (MGI:4367301|PMID:19763162)
RGD
PMID:19763162
MGI:4367301
NCBI chr 2:57,508,830...57,676,197
Ensembl chr 2:57,509,428...57,600,820
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Oxt
oxytocin/neurophysin I prepropeptide
IDA
RGD
PMID:18257653
RGD:2304114
NCBI chr 3:123,106,694...123,107,534
Ensembl chr 3:123,106,694...123,107,534
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P2rx7
purinergic receptor P2X 7
ISO
MGI:2386080 (MGI:3616954|PMID:16269410), (MGI:3797675|PMID:18519738)
RGD
PMID:16269410 PMID:18519738
MGI:3616954 MGI:3797675
NCBI chr12:39,353,613...39,396,042
Ensembl chr12:39,353,613...39,396,042
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Ptger4
prostaglandin E receptor 4
IMP
RGD
PMID:14751573 , PMID:17106877
RGD:10043372 , RGD:10045950
NCBI chr 2:54,951,625...54,966,470
Ensembl chr 2:54,952,821...54,963,448
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Pth
parathyroid hormone
IDA
RGD
PMID:15758479
RGD:7207452
NCBI chr 1:178,215,829...178,218,761
Ensembl chr 1:178,215,829...178,218,761
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Ptn
pleiotrophin
involved_in
IMP
PMID:9817766
UniProt
PMID:9817766 , PMID:9817766
RGD:14397563 , RGD:14397563
NCBI chr 4:64,239,156...64,330,996
Ensembl chr 4:64,239,158...64,330,996
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Ptpn11
protein tyrosine phosphatase, non-receptor type 11
involved_in
ISS ISO
GO_REF:0000024 (MGI:6414736|PMID:29644115)
UniProt RGD
PMID:29644115
GO_REF:0000024 MGI:6414736
NCBI chr12:40,895,515...40,955,999
Ensembl chr12:40,895,515...40,955,999
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Runx2
RUNX family transcription factor 2
IMP
RGD
PMID:11784711
RGD:1601657
NCBI chr 9:18,564,743...18,773,092
Ensembl chr 9:18,564,927...18,773,092
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Scube2
signal peptide, CUB domain and EGF like domain containing 2
ISO
MGI:5698367 (MGI:5698232|PMID:25639508)
RGD
PMID:25639508
MGI:5698232
NCBI chr 1:174,428,056...174,495,356
Ensembl chr 1:174,428,699...174,495,258
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Sox11
SRY-box transcription factor 11
involved_in
ISO ISS
(PMID:20626275) GO_REF:0000024 (MGI:3052265|PMID:15254231)
RGD UniProt
PMID:15254231 PMID:20626275
GO_REF:0000024 MGI:3052265
NCBI chr 6:46,629,967...46,631,988
Ensembl chr 6:46,629,974...46,631,983
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Tac1
tachykinin, precursor 1
IDA
RGD
PMID:17204323
RGD:2304342
NCBI chr 4:33,638,853...33,646,819
Ensembl chr 4:33,638,709...33,646,819
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Tacr1
tachykinin receptor 1
IMP
RGD
PMID:17204323
RGD:2304342
NCBI chr 4:113,247,236...113,416,139
Ensembl chr 4:113,247,795...113,414,504
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Tgfb2
transforming growth factor, beta 2
involved_in
ISO ISS
(PMID:17401695) GO_REF:0000024
RGD AgBase
PMID:17401695
GO_REF:0000024
NCBI chr13:105,039,639...105,142,010
Ensembl chr13:105,039,853...105,141,030
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Thrb
thyroid hormone receptor beta
IDA
RGD
PMID:15647824
RGD:1601663
NCBI chr15:8,890,578...9,239,815
Ensembl chr15:8,890,578...9,086,282
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Tob2
transducer of ERBB2, 2
ISO
MGI:3789484 (MGI:3785228|PMID:18358842)
RGD
PMID:18358842
MGI:3785228
NCBI chr 7:123,079,520...123,088,240
Ensembl chr 7:123,079,537...123,088,279
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Wnt10b
Wnt family member 10B
ISO
MGI:3582610|MGI:98578 (MGI:3574150|PMID:15728361), (MGI:3829542|PMID:17708715), (MGI:4358631|PMID:19723499)
RGD
PMID:15728361 PMID:17708715 PMID:19723499
MGI:3574150 MGI:3829542 MGI:4358631
NCBI chr 7:140,448,284...140,466,159
Ensembl chr 7:140,448,465...140,454,268
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Wnt5a
Wnt family member 5A
involved_in
ISO IEA
(PMID:20032469) GO_REF:0000107
RGD Ensembl
PMID:20032469
GO_REF:0000107
NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
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Zbtb16
zinc finger and BTB domain containing 16
involved_in
ISO ISS
(PMID:21547890) GO_REF:0000024
RGD UniProt
PMID:21547890
GO_REF:0000024
NCBI chr 8:52,980,226...53,146,765
Ensembl chr 8:52,985,313...53,146,953
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Acvr1
activin A receptor type 1
involved_in
ISO IEA
(PMID:18436533) GO_REF:0000107
RGD Ensembl
PMID:18436533
GO_REF:0000107
NCBI chr 3:44,432,476...44,539,680
Ensembl chr 3:44,432,471...44,522,930
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Acvr2a
activin A receptor type 2A
involved_in
ISO IEA
(PMID:18436533) GO_REF:0000107
RGD Ensembl
PMID:18436533
GO_REF:0000107
NCBI chr 3:32,947,901...33,034,598
Ensembl chr 3:32,947,378...33,034,282
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Acvr2b
activin A receptor type 2B
involved_in
ISO IEA
(PMID:18436533) GO_REF:0000107
RGD Ensembl
PMID:18436533
GO_REF:0000107
NCBI chr 8:128,087,308...128,126,776
Ensembl chr 8:128,087,345...128,118,746
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Adgrv1
adhesion G protein-coupled receptor V1
ISO
(MGI:6211994|PMID:22419726)
RGD
PMID:22419726
MGI:6211994
NCBI chr 2:8,926,843...9,504,455
Ensembl chr 2:8,926,850...9,504,134
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Adrb2
adrenoceptor beta 2
IEA ISO
GO_REF:0000107 MGI:1859675 (MGI:3575849|PMID:15724149)
Ensembl RGD
PMID:15724149
GO_REF:0000107 MGI:3575849
NCBI chr18:57,513,792...57,515,834
Ensembl chr18:57,513,793...57,515,834
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Alox5
arachidonate 5-lipoxygenase
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:6393219|PMID:24906289)
UniProt Ensembl RGD
PMID:24906289
GO_REF:0000024 GO_REF:0000107 MGI:6393219
NCBI chr 4:148,398,004...148,446,308
Ensembl chr 4:148,398,892...148,446,303
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Ano6
anoctamin 6
involved_in
ISO
(PMID:25589784) (MGI:5634871|PMID:25589784)
RGD
PMID:25589784
MGI:5634871
NCBI chr 7:137,142,063...137,335,208
Ensembl chr 7:137,142,170...137,335,208
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Atp2b1
ATPase plasma membrane Ca2+ transporting 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:5780494|PMID:26392310)
UniProt RGD
PMID:26392310
GO_REF:0000024 MGI:5780494
NCBI chr 7:41,114,606...41,223,138
Ensembl chr 7:41,114,697...41,220,579
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Atraid
all-trans retinoic acid-induced differentiation factor
involved_in
ISO
(PMID:21723284)
RGD
PMID:21723284
NCBI chr 6:26,680,628...26,685,185
Ensembl chr 6:26,680,598...26,685,235
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Bmp2
bone morphogenetic protein 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:18436533), (PMID:20576608) (MGI:5009350|PMID:20675382)
UniProt RGD
PMID:18436533 PMID:20576608 PMID:20675382
GO_REF:0000024 MGI:5009350
NCBI chr 3:126,335,963...126,346,771
Ensembl chr 3:126,335,863...126,346,318
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Bmp4
bone morphogenetic protein 4
involved_in
IDA ISS ISO IEA
GO_REF:0000024 (PMID:14749725), (PMID:18436533) GO_REF:0000107
UniProt RGD Ensembl
PMID:14749725 PMID:18436533 , PMID:15352071
GO_REF:0000024 GO_REF:0000107, RGD:9068399
NCBI chr15:20,776,060...20,791,013
Ensembl chr15:20,776,054...20,822,740
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Bmp6
bone morphogenetic protein 6
involved_in
ISO
(PMID:18436533)
RGD
PMID:18436533
NCBI chr17:26,955,142...27,112,820
Ensembl chr17:26,955,142...27,112,820
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Bmp7
bone morphogenetic protein 7
involved_in
ISO
(PMID:18436533)
RGD
PMID:18436533
NCBI chr 3:170,879,972...170,955,820
Ensembl chr 3:170,879,973...170,955,399
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Bmpr1a
bone morphogenetic protein receptor type 1A
involved_in
ISO
(PMID:18436533)
RGD
PMID:18436533
NCBI chr16:10,758,278...10,852,170
Ensembl chr16:10,758,527...10,802,512
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Bmpr1b
bone morphogenetic protein receptor type 1B
involved_in
ISO
(PMID:18436533)
RGD
PMID:18436533
NCBI chr 2:247,392,195...247,662,026
Ensembl chr 2:247,403,920...247,446,882
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Bmpr2
bone morphogenetic protein receptor type 2
involved_in
ISO
(PMID:18436533)
RGD
PMID:18436533
NCBI chr 9:66,568,074...66,683,019
Ensembl chr 9:66,568,074...66,676,494
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Ccn1
cellular communication network factor 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:20675382)
Ensembl RGD
PMID:20675382
GO_REF:0000107
NCBI chr 2:251,529,354...251,532,312
Ensembl chr 2:251,529,354...251,532,312
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Cd276
Cd276 molecule
ISO
MGI:3033707 (MGI:3052626|PMID:15317945)
RGD
PMID:15317945
MGI:3052626
NCBI chr 8:63,312,060...63,350,411
Ensembl chr 8:63,318,019...63,350,269
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Fam20c
FAM20C, golgi associated secretory pathway kinase
ISO
(MGI:3715055|PMID:17369251), (MGI:5427766|PMID:22615579)
RGD
PMID:17369251 PMID:22615579
MGI:3715055 MGI:5427766
NCBI chr12:17,913,771...17,972,733
Ensembl chr12:17,913,767...17,972,737
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Fbn2
fibrillin 2
ISO
(MGI:4836762|PMID:20855508)
RGD
PMID:20855508
MGI:4836762
NCBI chr18:53,068,495...53,272,254
Ensembl chr18:53,068,495...53,181,503
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Fgfr3
fibroblast growth factor receptor 3
ISO
MGI:2135670 (MGI:4437389|PMID:20053668)
RGD
PMID:20053668
MGI:4437389
NCBI chr14:82,272,322...82,287,739
Ensembl chr14:82,273,070...82,287,706
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Fzd9
frizzled class receptor 9
involved_in
ISS ISO
GO_REF:0000024 (MGI:4943600|PMID:21402791)
UniProt RGD
PMID:21402791
GO_REF:0000024 MGI:4943600
NCBI chr12:24,473,981...24,476,295
Ensembl chr12:24,473,981...24,476,295
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Gpm6b
glycoprotein m6b
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:21638316) GO_REF:0000024
Ensembl RGD UniProt
PMID:21638316
GO_REF:0000024 GO_REF:0000107
NCBI chr X:29,604,607...29,751,174
Ensembl chr X:29,607,075...29,648,403
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Isg15
ISG15 ubiquitin-like modifier
ISO
(MGI:4943600|PMID:21402791)
RGD
PMID:21402791
MGI:4943600
NCBI chr 5:173,624,862...173,629,124
Ensembl chr 5:173,624,310...173,626,248
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Kl
Klotho
involved_in
IEA ISO
GO_REF:0000107 (PMID:12110410)
Ensembl RGD
PMID:12110410
GO_REF:0000107
NCBI chr12:942,974...987,206
Ensembl chr12:943,006...987,551
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Mef2c
myocyte enhancer factor 2C
involved_in
ISS ISO
GO_REF:0000024 (MGI:5285459|PMID:21652706)
UniProt RGD
PMID:21652706
GO_REF:0000024 MGI:5285459
NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
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Mia3
MIA SH3 domain ER export factor 3
ISO
MGI:5007248 (MGI:5008683|PMID:21606205)
RGD
PMID:21606205
MGI:5008683
NCBI chr13:101,727,434...101,770,127
Ensembl chr13:101,727,935...101,761,541
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Nell1
neural EGFL like 1
involved_in
ISO ISS
(PMID:21723284) GO_REF:0000024
RGD UniProt
PMID:21723284
GO_REF:0000024
NCBI chr 1:105,348,577...106,218,970
Ensembl chr 1:105,349,069...106,218,958
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Osr1
odd-skipped related transcription factor 1
ISO
UniProtKB:Q91ZD1 (MGI:4950000|PMID:21262216)
RGD
PMID:21262216
MGI:4950000
NCBI chr 6:35,314,431...35,321,458
Ensembl chr 6:35,314,444...35,321,667
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Osr2
odd-skipped related transciption factor 2
ISO
UniProtKB:Q9WVG7 (MGI:4950000|PMID:21262216)
RGD
PMID:21262216
MGI:4950000
NCBI chr 7:74,047,820...74,055,096
Ensembl chr 7:74,047,814...74,055,256
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P2rx7
purinergic receptor P2X 7
ISO
MGI:2386080 (MGI:2667237|PMID:12677010), (MGI:3797675|PMID:18519738)
RGD
PMID:12677010 PMID:18519738
MGI:2667237 MGI:3797675
NCBI chr12:39,353,613...39,396,042
Ensembl chr12:39,353,613...39,396,042
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Pkdcc
protein kinase domain containing, cytoplasmic
ISO
(MGI:3813934|PMID:19097194)
RGD
PMID:19097194
MGI:3813934
NCBI chr 6:6,427,657...6,436,974
Ensembl chr 6:6,427,657...6,436,974
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Pla2g4a
phospholipase A2 group IVA
IEP
RGD
PMID:10807497
RGD:1642474
NCBI chr13:67,062,252...67,206,688
Ensembl chr13:66,988,937...67,206,693
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Pth
parathyroid hormone
involved_in
IDA ISO
(PMID:17696759)
RGD
PMID:17696759 , PMID:15758479 , PMID:22445539
RGD:7207452 , RGD:7242906
NCBI chr 1:178,215,829...178,218,761
Ensembl chr 1:178,215,829...178,218,761
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Ptn
pleiotrophin
involved_in
ISS ISO
GO_REF:0000024 (MGI:6294181|PMID:19442624)
UniProt RGD
PMID:19442624
GO_REF:0000024 MGI:6294181
NCBI chr 4:64,239,156...64,330,996
Ensembl chr 4:64,239,158...64,330,996
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Slc8a1
solute carrier family 8 member A1
involved_in
ISO
(PMID:25589784)
RGD
PMID:25589784
NCBI chr 6:4,244,076...4,564,262
Ensembl chr 6:4,258,991...4,520,604
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Smad3
SMAD family member 3
IDA
rat gene expressed in mouse osteoblastic cell line MC3T3-E1; TGF-beta down-regulates this activity
RGD
PMID:12096832
RGD:727387
NCBI chr 8:68,569,530...68,678,349
Ensembl chr 8:68,569,530...68,678,349
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Tfap2a
transcription factor AP-2 alpha
involved_in
ISO ISS
(PMID:19578371) GO_REF:0000024
RGD UniProt
PMID:19578371
GO_REF:0000024
NCBI chr17:24,653,342...24,670,457
Ensembl chr17:24,654,902...24,670,457
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Tgfb1
transforming growth factor, beta 1
involved_in
ISO ISS
(PMID:17401695) GO_REF:0000024
RGD AgBase
PMID:17401695
GO_REF:0000024
NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
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Tgfb3
transforming growth factor, beta 3
involved_in
ISO ISS
(PMID:17401695) GO_REF:0000024
RGD AgBase
PMID:17401695
GO_REF:0000024
NCBI chr 6:109,913,757...109,936,217
Ensembl chr 6:109,913,757...109,935,533
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Tmem119
transmembrane protein 119
involved_in
ISO IBA
(PMID:20025746) PMID:21873635 (MGI:4418582|PMID:20025746), (MGI:5700277|PMID:26207632)
RGD
PMID:20025746 PMID:26207632 , PMID:21873635 , PMID:21873635
MGI:4418582 MGI:5700277 , RGD:13792537 , RGD:13792537
NCBI chr12:48,598,498...48,605,704
Ensembl chr12:48,598,647...48,605,704
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Wnt10b
Wnt family member 10B
ISO
(MGI:3574150|PMID:15728361)
RGD
PMID:15728361
MGI:3574150
NCBI chr 7:140,448,284...140,466,159
Ensembl chr 7:140,448,465...140,454,268
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Wnt4
Wnt family member 4
involved_in
ISO IEA
(PMID:17720811) GO_REF:0000107
RGD Ensembl
PMID:17720811
GO_REF:0000107
NCBI chr 5:155,649,238...155,668,065
Ensembl chr 5:155,649,217...155,672,579
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Actn3
actinin alpha 3
ISO
(MGI:5291888|PMID:21784188)
RGD
PMID:21784188
MGI:5291888
NCBI chr 1:220,120,532...220,136,460
Ensembl chr 1:220,120,533...220,136,470
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Asxl2
ASXL transcriptional regulator 2
ISO
MGI:3840841 (MGI:5514358|PMID:21490954)
RGD
PMID:21490954
MGI:5514358
NCBI chr 6:27,835,346...27,919,285
Ensembl chr 6:27,887,797...27,915,563
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