ONTOLOGY REPORT - ANNOTATIONS
Term: regulation of cell differentiation
Accession: GO:0045595
browse the term
Definition: Any process that modulates the frequency, rate or extent of cell differentiation, the process in which relatively unspecialized cells acquire specialized structural and functional features.
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Apc
APC regulator of WNT signaling pathway
involved_in acts_upstream_of_or_within
IEA ISO IBA
GO_REF:0000118 MGI:97250 (PMID:17377531) GO_REF:0000033
TreeGrafter RGD GO_Central
PMID:17377531
GO_REF:0000033 GO_REF:0000118
NCBI chr18:25,828,558...25,925,511
Ensembl chr18:25,864,222...25,922,696
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Apc2
APC regulator of WNT signaling pathway 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:9,392,336...9,414,364
Ensembl chr 7:9,392,336...9,414,310
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Bcl6
BCL6, transcription repressor
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389
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Bmp4
bone morphogenetic protein 4
acts_upstream_of_or_within
IDA ISO
MGI:95586 (PMID:15525533)
RGD
PMID:15525533 PMID:12514223
RGD:631793
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
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Bmp6
bone morphogenetic protein 6
TAS
RGD
PMID:9168801
RGD:631742
NCBI chr17:26,318,121...26,469,691
Ensembl chr17:26,318,569...26,470,365
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Cebpb
CCAAT/enhancer binding protein beta
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:156,398,035...156,399,466
Ensembl chr 3:156,397,052...156,399,473
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Cebpd
CCAAT/enhancer binding protein delta
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr11:84,764,670...84,765,808
Ensembl chr11:84,764,565...84,765,829
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Cela1
chymotrypsin like elastase 1
acts_upstream_of_or_within
ISO
(PMID:17222338)
RGD
PMID:17222338
NCBI chr 7:131,773,161...131,786,300
Ensembl chr 7:131,742,002...131,786,285
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Chd5
chromodomain helicase DNA binding protein 5
involved_in
ISO
(MGI:5559659|PMID:23318260)
RGD
PMID:23318260
MGI:5559659
NCBI chr 5:162,848,273...162,898,997
Ensembl chr 5:162,848,394...162,896,291
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Ctnnb1
catenin beta 1
acts_upstream_of_or_within
ISO
(PMID:12717450)
RGD
PMID:12717450
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
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Erbb2
erb-b2 receptor tyrosine kinase 2
TAS
RGD
PMID:12610629
RGD:728778
NCBI chr10:83,411,197...83,435,078
Ensembl chr10:83,411,313...83,435,078
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Fes
FES proto-oncogene, tyrosine kinase
involved_in
ISO
(PMID:15302586)
RGD
PMID:15302586
NCBI chr 1:134,337,698...134,346,934
Ensembl chr 1:134,337,698...134,346,934
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Gli3
GLI family zinc finger 3
acts_upstream_of_or_within
ISO
MGI:96533 (PMID:16284117)
RGD
PMID:16284117
NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
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Hes5
hes family bHLH transcription factor 5
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:2149674 (PMID:18048645)
UniProt RGD
PMID:18048645
GO_REF:0000024
NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001
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Jag2
jagged canonical Notch ligand 2
TAS
RGD
PMID:8948600
RGD:69864
NCBI chr 6:131,983,059...132,005,665
Ensembl chr 6:131,983,056...132,005,818
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Klf4
KLF transcription factor 4
involved_in
ISO
(MGI:4887542|PMID:19816951)
RGD
PMID:19816951
MGI:4887542
NCBI chr 5:70,278,843...70,283,751
Ensembl chr 5:70,278,972...70,283,602
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Lif
LIF, interleukin 6 family cytokine
involved_in acts_upstream_of_or_within
IEA ISO IBA
GO_REF:0000118 MGI:1201791 (PMID:16258063) GO_REF:0000033
TreeGrafter RGD GO_Central
PMID:16258063
GO_REF:0000033 GO_REF:0000118
NCBI chr14:79,131,049...79,140,486
Ensembl chr14:79,134,574...79,140,482
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LOC120099267
polypyrimidine tract-binding protein 1-like
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr X:16,599,145...16,600,911
Ensembl chr X:16,599,038...16,600,920
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Nanog
Nanog homeobox
involved_in
ISO
(PMID:16501172)
RGD
PMID:16501172
NCBI chr 4:155,943,737...155,951,116
Ensembl chr 4:155,943,737...155,951,116
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Nrg1
neuregulin 1
acts_upstream_of_or_within
ISO
MGI:1928489 (PMID:11425901), (PMID:9892702)
RGD
PMID:9892702 PMID:11425901
NCBI chr16:59,250,658...60,304,519
Ensembl chr16:59,250,854...60,296,884
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Pax4
paired box 4
acts_upstream_of_or_within
ISO
MGI:2182122 (PMID:14970313)
RGD
PMID:14970313
NCBI chr 4:57,058,453...57,065,995
Ensembl chr 4:57,058,462...57,063,408
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Plekhb1
pleckstrin homology domain containing B1
involved_in
IEP IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central RGD
PMID:10923244
GO_REF:0000033 GO_REF:0000118, RGD:632808
NCBI chr 1:154,998,798...155,013,094
Ensembl chr 1:154,998,800...155,016,142
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Plekhb2
pleckstrin homology domain containing B2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 9:37,049,580...37,082,231
Ensembl chr 9:37,038,751...37,082,231
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Pou3f2
POU class 3 homeobox 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:8593698)
Ensembl RGD
PMID:8593698
GO_REF:0000107
NCBI chr 5:36,077,930...36,083,838
Ensembl chr 5:36,077,930...36,083,838
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Ptbp1
polypyrimidine tract binding protein 1
involved_in
IBA IEA
GO_REF:0000033 GO_REF:0000118
GO_Central TreeGrafter
GO_REF:0000033 GO_REF:0000118
NCBI chr 7:9,842,574...9,852,332
Ensembl chr 7:9,842,574...9,852,397
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Ptbp1-ps3
polypyrimidine tract binding protein 1, pseudogene 3
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
NCBI chr 4:105,696,627...105,698,961
Ensembl chr 4:105,696,503...105,699,047 Ensembl chr 4:105,696,503...105,699,047
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Ptbp3
polypyrimidine tract binding protein 3
IMP
RGD
PMID:10207106
RGD:704461
NCBI chr 5:74,313,367...74,399,439
Ensembl chr 5:74,315,101...74,399,791
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Runx1
RUNX family transcription factor 1
involved_in
IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr11:31,839,880...32,074,427
Ensembl chr11:31,843,764...32,074,542
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Runx2
RUNX family transcription factor 2
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
NCBI chr 9:16,167,504...16,492,826
Ensembl chr 9:16,167,482...16,492,167
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Runx3
RUNX family transcription factor 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:147,360,587...147,419,161
Ensembl chr 5:147,360,994...147,419,156
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S100a10
S100 calcium binding protein A10
NAS
RGD
PMID:3422491
RGD:729699
NCBI chr 2:179,221,012...179,229,659
Ensembl chr 2:179,220,887...179,229,661
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Sik1
salt-inducible kinase 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:3044497|PMID:15177563)
UniProt RGD
PMID:15177563
GO_REF:0000024 MGI:3044497
NCBI chr20:9,949,407...9,959,036
Ensembl chr20:9,947,396...9,958,991
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Smptb
polypyrimidine tract-binding protein
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr X:16,609,016...16,610,898
Ensembl chr X:16,606,597...16,610,874
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Sox17
SRY-box transcription factor 17
acts_upstream_of_or_within
ISO
MGI:3717121 (PMID:21146513)
RGD
PMID:21146513
NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228
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Sox9
SRY-box transcription factor 9
acts_upstream_of_or_within
ISO
MGI:2385468|MGI:3053819 (PMID:17698607)
RGD
PMID:17698607
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
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Tbx19
T-box transcription factor 19
acts_upstream_of_or_within
ISO
MGI:2655153 (PMID:23070814)
RGD
PMID:23070814
NCBI chr13:77,450,848...77,484,475
Ensembl chr13:77,450,849...77,504,163
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Tcfl5
transcription factor like 5
involved_in
ISO
(PMID:9763657)
RGD
PMID:9763657
NCBI chr 3:167,734,471...167,754,174
Ensembl chr 3:167,734,473...167,754,282
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Tfap2a
transcription factor AP-2 alpha
involved_in
ISO
(PMID:20607706)
RGD
PMID:20607706
NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507
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Tfap2b
transcription factor AP-2 beta
involved_in
ISO ISS
(PMID:20607706) GO_REF:0000024
RGD UniProt
PMID:20607706
GO_REF:0000024
NCBI chr 9:21,786,251...21,816,054
Ensembl chr 9:21,786,258...21,814,520
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Tnr
tenascin R
involved_in
ISO
(MGI:6828897|PMID:9169525)
RGD
PMID:9169525
MGI:6828897
NCBI chr13:71,751,714...72,172,731
Ensembl chr13:72,091,585...72,167,641
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Uncx
UNC homeobox
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1859373 (PMID:10804169)
Ensembl RGD
PMID:10804169
GO_REF:0000107
NCBI chr12:15,092,779...15,097,300
Ensembl chr12:15,092,784...15,097,300
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Wnt3
Wnt family member 3
TAS
RGD
PMID:9505170
RGD:727216
NCBI chr10:88,680,198...88,724,170
Ensembl chr10:88,680,248...88,724,099
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Wnt3a
Wnt family member 3A
acts_upstream_of_or_within
ISO
(PMID:12717450)
RGD
PMID:12717450
NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324
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Dll1
delta like canonical Notch ligand 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1932522|MGI:3044907 (PMID:16495313)
Ensembl RGD
PMID:16495313
GO_REF:0000107
NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
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Hes1
hes family bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:2149672 (PMID:10952889)
RGD
PMID:10952889
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
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Jag1
jagged canonical Notch ligand 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:15064243)
Ensembl RGD
PMID:15064243
GO_REF:0000107
NCBI chr 3:124,406,783...124,442,220
Ensembl chr 3:124,406,794...124,442,209
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Nodal
nodal growth differentiation factor
acts_upstream_of_or_within
ISO
MGI:2180793 (PMID:16678814)
RGD
PMID:16678814
NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837
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Notch1
notch receptor 1
acts_upstream_of_or_within
ISO
(PMID:15064243)
RGD
PMID:15064243
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
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Adgrv1
adhesion G protein-coupled receptor V1
involved_in
ISO
(PMID:15671307)
RGD
PMID:15671307
NCBI chr 2:11,331,434...11,911,713
Ensembl chr 2:11,331,442...11,911,688
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Iqcb1
IQ motif containing B1
involved_in
ISO
(PMID:15723066)
RGD
PMID:15723066
NCBI chr11:63,905,595...63,960,141
Ensembl chr11:63,905,590...63,960,093
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Nphp3
nephrocystin 3
involved_in
ISO
(PMID:12872122) (MGI:3047096|PMID:12872122)
RGD
PMID:12872122
MGI:3047096
NCBI chr 8:104,621,908...104,662,383
Ensembl chr 8:104,621,864...104,662,383
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Pkp2
plakophilin 2
involved_in
ISO
(PMID:22889254)
RGD
PMID:22889254
NCBI chr11:84,661,783...84,727,730
Ensembl chr11:84,661,783...84,727,730
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Ush2a
usherin
involved_in
ISO IEA
(PMID:15671307) GO_REF:0000107
RGD Ensembl
PMID:15671307
GO_REF:0000107
NCBI chr13:99,837,445...100,503,935
Ensembl chr13:99,837,445...100,503,922
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Gli3
GLI family zinc finger 3
involved_in
ISO
(MGI:4355451|PMID:19667090)
RGD
PMID:19667090
MGI:4355451
NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
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Ihh
Indian hedgehog signaling molecule
involved_in
ISO
(MGI:3836494|PMID:19109233)
RGD
PMID:19109233
MGI:3836494
NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532
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Shh
sonic hedgehog signaling molecule
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:10981962)
Ensembl RGD
PMID:10981962
GO_REF:0000107
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
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Casz1
castor zinc finger 1
acts_upstream_of_or_within
ISO
MGI:3052661|MGI:4841554 (PMID:25654255)
RGD
PMID:25654255
NCBI chr 5:159,243,965...159,393,935
Ensembl chr 5:159,243,995...159,393,400
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Gdf11
growth differentiation factor 11
acts_upstream_of_or_within
ISO
(PMID:15976303)
RGD
PMID:15976303
NCBI chr 7:1,311,732...1,325,211
Ensembl chr 7:1,311,732...1,320,725
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Hes1
hes family bHLH transcription factor 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2149672 (PMID:16038893)
Ensembl RGD
PMID:16038893
GO_REF:0000107
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
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Pou4f2
POU class 4 homeobox 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:5316576|PMID:21875655)
UniProt RGD
PMID:21875655
GO_REF:0000024 MGI:5316576
NCBI chr19:29,486,686...29,490,327
Ensembl chr19:29,486,686...29,490,327
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Rest
RE1-silencing transcription factor
involved_in
ISO IEA ISS
(PMID:20942606) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:20942606
GO_REF:0000024 GO_REF:0000107
NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354
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Mir21
microRNA 21
involved_in
ISO
(PMID:22034194)
RGD
PMID:22034194
NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348
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Ldlr
low density lipoprotein receptor
involved_in
ISO IEA
UniProtKB:P05067|UniProtKB:P49768 (MGI:4415751|PMID:20005821) GO_REF:0000107
RGD Ensembl
PMID:20005821
GO_REF:0000107 MGI:4415751
NCBI chr 8:20,270,020...20,292,981
Ensembl chr 8:20,270,041...20,294,580
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Nr1d1
nuclear receptor subfamily 1, group D, member 1
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:6283959|PMID:30792350) GO_REF:0000024
Ensembl RGD UniProt
PMID:30792350
GO_REF:0000024 GO_REF:0000107 MGI:6283959
NCBI chr10:83,728,348...83,735,562
Ensembl chr10:83,728,318...83,735,705
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Trem2
triggering receptor expressed on myeloid cells 2
involved_in
ISO
(MGI:6152919|PMID:29407460)
RGD
PMID:29407460
MGI:6152919
NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170
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Atf5
activating transcription factor 5
IMP
RGD
PMID:15829641
RGD:2302988
NCBI chr 1:95,295,602...95,299,755
Ensembl chr 1:95,295,610...95,299,707
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Dab1
DAB adaptor protein 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857750 (PMID:18848628)
Ensembl RGD
PMID:18848628
GO_REF:0000107
NCBI chr 5:118,392,953...119,513,625
Ensembl chr 5:119,140,533...119,510,552
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Dll3
delta like canonical Notch ligand 3
IDA
RGD
PMID:16144902
RGD:1599776
NCBI chr 1:83,562,011...83,570,008
Ensembl chr 1:83,562,014...83,569,750
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F2
coagulation factor II, thrombin
involved_in
ISO IEA
(PMID:1691280) GO_REF:0000107
RGD Ensembl
PMID:1691280
GO_REF:0000107
NCBI chr 3:77,596,196...77,609,486
Ensembl chr 3:77,596,198...77,609,486
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Fgfr3
fibroblast growth factor receptor 3
acts_upstream_of_or_within
ISO
MGI:1931521 (PMID:12574417)
RGD
PMID:12574417
NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341
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Gpr37l1
G protein-coupled receptor 37-like 1
acts_upstream_of_or_within
ISO
MGI:5439169 (PMID:24062445)
RGD
PMID:24062445
NCBI chr13:46,598,574...46,605,421
Ensembl chr13:46,598,578...46,605,421
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Hes5
hes family bHLH transcription factor 5
involved_in
ISS ISO
GO_REF:0000024 (MGI:2655020|PMID:12666205)
UniProt RGD
PMID:12666205
GO_REF:0000024 MGI:2655020
NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001
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Hmga2
high mobility group AT-hook 2
acts_upstream_of_or_within
ISO
(PMID:18640244)
RGD
PMID:18640244
NCBI chr 7:55,877,145...55,998,813
Ensembl chr 7:55,880,112...55,994,784
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Id4
inhibitor of DNA binding 4
acts_upstream_of_or_within
ISO
MGI:88177 (PMID:15882580)
RGD
PMID:15882580
NCBI chr17:16,389,387...16,391,956
Ensembl chr17:16,389,387...16,392,470
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Kdm4a
lysine demethylase 4A
IMP
RGD
PMID:24747049
RGD:9587433
NCBI chr 5:131,672,754...131,719,534
Ensembl chr 5:131,672,754...131,719,501
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Mbd1
methyl-CpG binding domain protein 1
IDA
RGD
PMID:16881068
RGD:9588644
NCBI chr18:67,869,870...67,884,501
Ensembl chr18:67,869,992...67,886,554
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Mecp2
methyl CpG binding protein 2
IDA
RGD
PMID:16881068
RGD:9588644
NCBI chr X:151,781,177...151,844,687
Ensembl chr X:151,789,930...151,844,689
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Mycn
MYCN proto-oncogene, bHLH transcription factor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:18640244)
Ensembl RGD
PMID:18640244
GO_REF:0000107
NCBI chr 6:35,717,764...35,723,590
Ensembl chr 6:35,717,764...35,723,590
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Nf1
neurofibromin 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857444|MGI:2176055|MGI:2176057 (PMID:10442636), (PMID:11297510), (PMID:9878702)
Ensembl RGD
PMID:9878702 PMID:10442636 PMID:11297510
GO_REF:0000107
NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658
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Nog
noggin
involved_in
IMP ISO IEA ISS
(MGI:3808973|PMID:18028109) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:18028109 PMID:14975730
GO_REF:0000024 GO_REF:0000107 MGI:3808973 , RGD:1358325
NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
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Nr2e1
nuclear receptor subfamily 2, group E, member 1
acts_upstream_of_or_within
ISO
MGI:2176560 (PMID:14702088)
RGD
PMID:14702088
NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949
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Ntrk3
neurotrophic receptor tyrosine kinase 3
IMP
RGD
PMID:12075995
RGD:2325633
NCBI chr 1:132,116,472...132,503,849
Ensembl chr 1:132,132,849...132,503,286
G
Actr3
actin related protein 3
IMP
RGD
PMID:19846719
RGD:11530054
NCBI chr13:36,800,739...36,843,837
Ensembl chr13:36,800,093...36,844,124
G
Arhgap4
Rho GTPase activating protein 4
IMP
RGD
PMID:17804252
RGD:2313143
NCBI chr X:151,636,071...151,651,528
Ensembl chr X:151,632,454...151,651,128
G
Ccr5
C-C motif chemokine receptor 5
IMP
RGD
PMID:16537566
RGD:4890441
NCBI chr 8:123,752,423...123,757,538
Ensembl chr 8:123,752,325...123,759,260
G
Cdh1
cadherin 1
IMP
RGD
PMID:23226367
RGD:151665335
NCBI chr19:34,492,371...34,561,775
Ensembl chr19:34,492,371...34,561,775
G
Cdk5
cyclin-dependent kinase 5
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1197518 (PMID:22573681)
Ensembl RGD
PMID:22573681
GO_REF:0000107
NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
G
Cdkl3
cyclin-dependent kinase-like 3
acts_upstream_of_or_within involved_in
IMP ISO IBA IEA
PMID:20347982 (PMID:20347982) GO_REF:0000033 GO_REF:0000118
RGD GO_Central TreeGrafter
PMID:20347982 PMID:20347982
GO_REF:0000033 GO_REF:0000118, RGD:8693354
NCBI chr10:36,263,212...36,349,268
Ensembl chr10:36,266,977...36,349,268
G
Dip2b
disco-interacting protein 2 homolog B
involved_in
ISO
(MGI:6458180|PMID:32153366)
RGD
PMID:32153366
MGI:6458180
NCBI chr 7:131,174,575...131,350,417
Ensembl chr 7:131,174,567...131,349,092
G
Draxin
dorsal inhibitory axon guidance protein
acts_upstream_of_or_within
ISO
(PMID:20621059)
RGD
PMID:20621059
NCBI chr 5:158,530,149...158,563,457
Ensembl chr 5:158,530,342...158,564,483
G
Fstl4
follistatin-like 4
NOT|acts_upstream_of_or_within
ISO
(PMID:24573299)
RGD
PMID:24573299
NCBI chr10:36,911,422...37,344,545
Ensembl chr10:36,911,420...37,338,588
G
Ifrd1
interferon-related developmental regulator 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:97321 (PMID:18052984)
Ensembl RGD
PMID:18052984
GO_REF:0000107
NCBI chr 6:57,269,395...57,317,833
Ensembl chr 6:57,269,384...57,288,990
G
Kiaa0319
KIAA0319 homolog
acts_upstream_of_or_within
ISO
(PMID:28334068)
RGD
PMID:28334068
NCBI chr17:40,162,512...40,226,666
Ensembl chr17:40,165,084...40,225,653
G
Mag
myelin-associated glycoprotein
involved_in
IMP
PMID:9298990
UniProt
PMID:9298990
RGD:12050149
NCBI chr 1:86,148,227...86,163,726
Ensembl chr 1:86,148,228...86,163,656
G
Map2
microtubule-associated protein 2
involved_in
IMP ISO
PMID:28426968 (MGI:6148385|PMID:28426968)
RGD
PMID:28426968 PMID:28426968
MGI:6148385 , RGD:13514087
NCBI chr 9:67,723,422...67,981,886
Ensembl chr 9:67,723,371...67,979,809
G
Mt3
metallothionein 3
involved_in
ISS ISO
GO_REF:0000024 (PMID:16601975), (PMID:17712581)
UniProt RGD
PMID:16601975 PMID:17712581
GO_REF:0000024
NCBI chr19:10,848,754...10,850,158
Ensembl chr19:10,848,755...10,850,158
G
Nrp1
neuropilin 1
acts_upstream_of_or_within
ISO
MGI:107558 (PMID:12852851)
RGD
PMID:12852851
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Ntn1
netrin 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:10704383)
Ensembl RGD
PMID:10704383
GO_REF:0000107
NCBI chr10:52,899,933...53,098,591
Ensembl chr10:52,899,934...53,085,326
G
Ptprs
protein tyrosine phosphatase, receptor type, S
involved_in
ISO IEA ISS
(MGI:4880863|PMID:19780196) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:19780196
GO_REF:0000024 GO_REF:0000107 MGI:4880863
NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947
G
Rnf6
ring finger protein 6
acts_upstream_of_or_within
ISO
MGI:104572 (PMID:16204183)
RGD
PMID:16204183
NCBI chr12:8,816,797...8,826,870
Ensembl chr12:8,816,833...8,826,847
G
Rtn4
reticulon 4
involved_in
ISS IEA ISO IDA
PMID:10667797 GO_REF:0000107 (MGI:4830045|PMID:20573699) (PMID:10667797)
Ensembl RGD
PMID:10667797 PMID:20573699 PMID:10667797 PMID:20573699
GO_REF:0000107 MGI:4830045 , RGD:8553459 , RGD:8554113
NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686
G
Rtn4r
reticulon 4 receptor
involved_in
ISS ISO
GO_REF:0000024 (MGI:5688832|PMID:22923615)
UniProt RGD
PMID:22923615
GO_REF:0000024 MGI:5688832
NCBI chr11:82,844,309...82,869,251
Ensembl chr11:82,844,309...82,869,466
G
Sema3a
semaphorin 3A
acts_upstream_of_or_within
IDA ISO
MGI:106206 (PMID:12852851)
RGD
PMID:12852851 PMID:12077190
RGD:628318
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
G
Sema3g
semaphorin 3G
involved_in
ISO
(MGI:3619679|PMID:16098142)
RGD
PMID:16098142
MGI:3619679
NCBI chr16:6,413,589...6,425,221
Ensembl chr16:6,413,589...6,425,221
G
Sema4f
ssemaphorin 4F
acts_upstream_of_or_within
IDA
PMID:10051670
MGI
PMID:10051670
RGD:69991
NCBI chr 4:115,411,411...115,437,721
Ensembl chr 4:115,411,417...115,437,721
G
Sema6c
semaphorin 6C
involved_in
ISO
(PMID:12110693)
RGD
PMID:12110693
NCBI chr 2:182,733,635...182,750,066
Ensembl chr 2:182,737,474...182,746,856
G
Sema6d
semaphorin 6D
involved_in
ISO
(PMID:12110693)
RGD
PMID:12110693
NCBI chr 3:111,883,415...111,941,100
Ensembl chr 3:111,883,872...111,941,094
G
Slit2
slit guidance ligand 2
acts_upstream_of_or_within
ISO
(PMID:12879062)
RGD
PMID:12879062
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
G
Tnr
tenascin R
acts_upstream_of_or_within
ISO
(PMID:16831557)
RGD
PMID:16831557
NCBI chr13:71,751,714...72,172,731
Ensembl chr13:72,091,585...72,167,641
G
Trim46
tripartite motif-containing 46
involved_in
IMP
PMID:28426968
ARUK-UCL
PMID:28426968
RGD:13514087
NCBI chr 2:174,641,494...174,654,237
Ensembl chr 2:174,641,496...174,654,141
G
Ttc3
tetratricopeptide repeat domain 3
involved_in
ISO
(PMID:17488780)
RGD
PMID:17488780
NCBI chr11:33,689,119...33,788,976
Ensembl chr11:33,688,952...33,788,975
G
Hdac6
histone deacetylase 6
IMP
RGD
PMID:19884510
RGD:9681717
NCBI chr X:14,550,645...14,572,445
Ensembl chr X:14,551,044...14,572,441
G
Nrp1
neuropilin 1
acts_upstream_of_or_within
IMP ISO
(PMID:9753685)
RGD
PMID:9753685 PMID:9288754
RGD:633436
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Plxna3
plexin A3
acts_upstream_of_or_within
ISO
MGI:107558|MGI:1096347 (PMID:11683995)
RGD
PMID:11683995
NCBI chr X:152,115,699...152,131,608
Ensembl chr X:152,115,819...152,131,603
G
Ryk
receptor-like tyrosine kinase
acts_upstream_of_or_within
ISO
MGI:98958 (PMID:16723543)
RGD
PMID:16723543
NCBI chr 8:103,419,338...103,492,083
Ensembl chr 8:103,419,275...103,491,698
G
Sema3a
semaphorin 3A
involved_in acts_upstream_of_or_within
IEA ISO IBA
GO_REF:0000118 MGI:104518|MGI:107683|MGI:96721 (PMID:11683995), (PMID:18550718), (PMID:7748561), (PMID:9753685) GO_REF:0000033
TreeGrafter RGD GO_Central
PMID:7748561 PMID:9753685 PMID:11683995 PMID:18550718
GO_REF:0000033 GO_REF:0000118
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
G
Sema3b
semaphorin 3B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:108,271,663...108,280,326
Ensembl chr 8:108,271,666...108,282,919
G
Sema3c
semaphorin 3C
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:17,583,212...17,747,234
Ensembl chr 4:17,583,212...17,746,534
G
Sema3d
semaphorin 3D
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:22,316,769...22,505,930
Ensembl chr 4:22,316,779...22,505,930
G
Sema3e
semaphorin 3E
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:20,297,534...20,555,287
Ensembl chr 4:20,299,718...20,555,229
G
Sema3f
semaphorin 3F
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:107683 (PMID:11683995), (PMID:9753685)
GO_Central RGD
PMID:9753685 PMID:11683995
GO_REF:0000033
NCBI chr 8:108,357,629...108,386,569
Ensembl chr 8:108,357,629...108,387,083
G
Sema3g
semaphorin 3G
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr16:6,413,589...6,425,221
Ensembl chr16:6,413,589...6,425,221
G
Sema4a
semaphorin 4A
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:173,896,432...173,917,903
Ensembl chr 2:173,896,439...173,914,442
G
Sema4b
semaphorin 4B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:134,136,646...134,177,777
Ensembl chr 1:134,149,536...134,177,775
G
Sema4c
semaphorin 4C
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 9:38,791,668...38,802,171
Ensembl chr 9:38,791,670...38,802,128
G
Sema4d
semaphorin 4D
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr17:13,430,324...13,537,146
Ensembl chr17:13,430,379...13,537,138
G
Sema4f
ssemaphorin 4F
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:115,411,411...115,437,721
Ensembl chr 4:115,411,417...115,437,721
G
Sema4g
semaphorin 4G
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:243,849,979...243,865,343
Ensembl chr 1:243,853,854...243,865,341
G
Sema5a
semaphorin 5A
involved_in
IMP IBA IEA
PMID:15603739 GO_REF:0000033 GO_REF:0000118
GO_Central TreeGrafter
PMID:15603739
GO_REF:0000033 GO_REF:0000118, RGD:8553809
NCBI chr 2:83,309,843...83,741,084
Ensembl chr 2:83,309,843...83,741,084
G
Sema5b
semaphorin 5B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr11:65,102,532...65,225,456
Ensembl chr11:65,102,031...65,225,311
G
Sema6a
semaphorin 6A
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr18:40,050,623...40,171,954
Ensembl chr18:40,050,624...40,171,954
G
Sema6b
semaphorin 6B
involved_in
IBA IEA
GO_REF:0000033 GO_REF:0000118
GO_Central TreeGrafter
GO_REF:0000033 GO_REF:0000118
NCBI chr 9:950,939...967,905
Ensembl chr 9:950,939...961,521
G
Sema6c
semaphorin 6C
involved_in
IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr 2:182,733,635...182,750,066
Ensembl chr 2:182,737,474...182,746,856
G
Sema6d
semaphorin 6D
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:111,883,415...111,941,100
Ensembl chr 3:111,883,872...111,941,094
G
Sema7a
semaphorin 7A (John Milton Hagen blood group)
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 8:58,348,448...58,370,536
Ensembl chr 8:58,348,448...58,370,536
G
Slit1
slit guidance ligand 1
IDA
RGD
PMID:15632296
RGD:1358459
NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127
G
Wnt3
Wnt family member 3
acts_upstream_of_or_within
ISO
(PMID:18716223)
RGD
PMID:18716223
NCBI chr10:88,680,198...88,724,170
Ensembl chr10:88,680,248...88,724,099
G
Wnt3a
Wnt family member 3A
acts_upstream_of_or_within
ISO
(PMID:18716223)
RGD
PMID:18716223
NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324
G
Wnt5a
Wnt family member 5A
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:101766 (PMID:16723543)
Ensembl RGD
PMID:16723543
GO_REF:0000107
NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
G
Kiaa0319
KIAA0319 homolog
acts_upstream_of_or_within
ISO
(PMID:28334068) MGI:4362922 (PMID:28334068)
RGD
PMID:28334068
NCBI chr17:40,162,512...40,226,666
Ensembl chr17:40,165,084...40,225,653
G
Tnr
tenascin R
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2154583 (PMID:16870730)
Ensembl RGD
PMID:16870730
GO_REF:0000107
NCBI chr13:71,751,714...72,172,731
Ensembl chr13:72,091,585...72,167,641
G
Dab1
DAB adaptor protein 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1861918|MGI:1891699 (PMID:21111240)
Ensembl RGD
PMID:21111240
GO_REF:0000107
NCBI chr 5:118,392,953...119,513,625
Ensembl chr 5:119,140,533...119,510,552
G
Efnb3
ephrin B3
involved_in
ISO
(MGI:5905553|PMID:12383247)
RGD
PMID:12383247
MGI:5905553
NCBI chr10:54,274,506...54,281,951
Ensembl chr10:54,274,506...54,280,471
G
Ephb2
Eph receptor B2
acts_upstream_of_or_within
ISO
(PMID:12971893)
RGD
PMID:12971893
NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
G
Gdi1
GDP dissociation inhibitor 1
involved_in
IDA
PMID:21856246
UniProt
PMID:21856246
RGD:8553614
NCBI chr X:152,087,611...152,094,274
Ensembl chr X:152,087,444...152,094,272
G
Lrp4
LDL receptor related protein 4
involved_in
ISS ISO
GO_REF:0000024 (MGI:5439235|PMID:22854782)
UniProt RGD
PMID:22854782
GO_REF:0000024 MGI:5439235
NCBI chr 3:77,429,600...77,483,593
Ensembl chr 3:77,429,798...77,483,593
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Mbp
myelin basic protein
IMP
RGD
PMID:12210134
RGD:1358766
NCBI chr18:75,855,878...75,966,404
Ensembl chr18:75,855,878...75,966,404
G
Psen1
presenilin 1
acts_upstream_of_or_within
ISO
MGI:2149116 (PMID:15548218)
RGD
PMID:15548218
NCBI chr 6:103,323,052...103,375,088
Ensembl chr 6:103,323,120...103,371,650
G
Pten
phosphatase and tensin homolog
involved_in
ISO
(MGI:3629385|PMID:16675393)
RGD
PMID:16675393
MGI:3629385
NCBI chr 1:230,630,443...230,697,070
Ensembl chr 1:230,630,338...230,696,838
G
Ptk2
protein tyrosine kinase 2
acts_upstream_of_or_within
ISO
MGI:1857596 (PMID:15378065)
RGD
PMID:15378065
NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783
G
Rtn4
reticulon 4
IDA IMP
RGD
PMID:10667796 PMID:18973596
RGD:628417 , RGD:2314943
NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686
G
Rtn4r
reticulon 4 receptor
TAS
RGD
PMID:12037567
RGD:727379
NCBI chr11:82,844,309...82,869,251
Ensembl chr11:82,844,309...82,869,466
G
Rufy3
RUN and FYVE domain containing 3
involved_in
IDA
PMID:17439943
HGNC-UCL
PMID:17439943
RGD:8554472
NCBI chr14:19,431,530...19,506,476
Ensembl chr14:19,432,524...19,507,004
G
Syngap1
synaptic Ras GTPase activating protein 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:15014045)
Ensembl RGD
PMID:15014045
GO_REF:0000107
NCBI chr20:5,026,366...5,056,659
Ensembl chr20:5,026,364...5,056,672
G
Thy1
Thy-1 cell surface antigen
involved_in
IDA
PMID:15547945
UniProt
PMID:15547945
RGD:8554523
NCBI chr 8:44,389,495...44,394,688
Ensembl chr 8:44,389,513...44,394,659
G
Trak2
trafficking kinesin protein 2
IMP
RGD
PMID:23395375
RGD:13208834
NCBI chr 9:60,348,531...60,414,036
Ensembl chr 9:60,350,012...60,413,996
G
Tsc2
TSC complex subunit 2
IMP
RGD
PMID:18794346
RGD:11568688
NCBI chr10:13,621,135...13,655,773
Ensembl chr10:13,621,136...13,655,951
G
Flt3
Fms related receptor tyrosine kinase 3
acts_upstream_of_or_within
ISO
(PMID:16618805)
RGD
PMID:16618805
NCBI chr12:7,623,930...7,699,474
Ensembl chr12:7,623,930...7,699,474
G
Hmgb3
high mobility group box 3
acts_upstream_of_or_within
ISO
(PMID:12714519)
RGD
PMID:12714519
NCBI chr X:149,296,303...149,301,290
Ensembl chr X:149,296,375...149,301,292
G
Id2
inhibitor of DNA binding 2
acts_upstream_of_or_within
ISO
MGI:2384134 (PMID:18523151)
RGD
PMID:18523151
NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400
G
Sfrp1
secreted frizzled-related protein 1
involved_in
ISO IEA
(PMID:18941195) (MGI:3814493|PMID:18941195) GO_REF:0000107
RGD Ensembl
PMID:18941195
GO_REF:0000107 MGI:3814493
NCBI chr16:68,575,763...68,614,180
Ensembl chr16:68,575,763...68,614,286
G
Foxj2
forkhead box J2
involved_in
ISO
(PMID:24792364)
RGD
PMID:24792364
NCBI chr 4:156,047,043...156,073,540
Ensembl chr 4:156,046,969...156,073,518
G
Fbn1
fibrillin 1
involved_in
ISO
(MGI:6828895|PMID:33705351)
RGD
PMID:33705351
MGI:6828895
NCBI chr 3:112,554,257...112,750,835
Ensembl chr 3:112,554,925...112,750,889
G
Flcn
folliculin
involved_in
ISS ISO
GO_REF:0000024 (MGI:6393150|PMID:27913603)
UniProt RGD
PMID:27913603
GO_REF:0000024 MGI:6393150
NCBI chr10:44,588,621...44,607,808
Ensembl chr10:44,588,624...44,607,769
G
Gata2
GATA binding protein 2
acts_upstream_of_or_within
ISO
(PMID:16082385)
RGD
PMID:16082385
NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
G
Mir128-1
microRNA 128-1
involved_in
ISO
(PMID:33058756)
RGD
PMID:33058756
NCBI chr13:39,699,449...39,699,530
Ensembl chr13:39,699,449...39,699,530
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Mir128-2
microRNA 128-2
involved_in
ISO
(PMID:33058756)
RGD
PMID:33058756
NCBI chr 8:112,085,467...112,085,550
Ensembl chr 8:112,085,467...112,085,550
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Slc7a10
solute carrier family 7 member 10
involved_in
IEA ISO
GO_REF:0000107 (MGI:6515183|PMID:33707431)
Ensembl RGD
PMID:33707431
GO_REF:0000107 MGI:6515183
NCBI chr 1:87,829,084...87,845,073
Ensembl chr 1:87,829,175...87,845,071
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Trpv4
transient receptor potential cation channel, subfamily V, member 4
involved_in
ISO
(MGI:5440106|PMID:23021218)
RGD
PMID:23021218
MGI:5440106
NCBI chr12:41,938,533...41,977,517
Ensembl chr12:41,938,560...41,977,517
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Mir19a
microRNA 19a
acts_upstream_of
ISO
(PMID:27098600)
RGD
PMID:27098600
NCBI chr15:92,180,912...92,180,993
Ensembl chr15:92,180,912...92,180,993
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Mir19b1
microRNA 19b-1
acts_upstream_of
ISO
(PMID:27098600)
RGD
PMID:27098600
NCBI chr15:92,181,214...92,181,300
Ensembl chr15:92,181,214...92,181,300
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Mir19b2
microRNA 19b-2
acts_upstream_of
ISO
(PMID:27098600)
RGD
PMID:27098600
NCBI chr X:132,422,072...132,422,167
Ensembl chr X:132,422,072...132,422,167
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Nog
noggin
involved_in
IEA ISO
GO_REF:0000107 (MGI:3783944|PMID:17218603)
Ensembl RGD
PMID:17218603
GO_REF:0000107 MGI:3783944
NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
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Bmp2
bone morphogenetic protein 2
involved_in
ISO ISS
(PMID:18545679) GO_REF:0000024
RGD UniProt
PMID:18545679
GO_REF:0000024
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
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Ccnd2
cyclin D2
IDA
RGD
PMID:27302109
RGD:151660350
NCBI chr 4:159,966,883...159,989,261
Ensembl chr 4:159,962,363...159,989,495
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Dkk1
dickkopf WNT signaling pathway inhibitor 1
involved_in
ISO
(PMID:20559569)
RGD
PMID:20559569
NCBI chr 1:228,381,521...228,385,202
Ensembl chr 1:228,381,521...228,385,202
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Dll1
delta like canonical Notch ligand 1
involved_in
IEA ISO
GO_REF:0000107 (MGI:5902683|PMID:18371447)
Ensembl RGD
PMID:18371447
GO_REF:0000107 MGI:5902683
NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
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Frs2
fibroblast growth factor receptor substrate 2
involved_in
ISO
UniProtKB:O75084 (PMID:23939491)
RGD
PMID:23939491
NCBI chr 7:52,711,255...52,792,738
Ensembl chr 7:52,711,257...52,792,743
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Fzd7
frizzled class receptor 7
involved_in
ISO
UniProtKB:Q8WU20 (PMID:23939491)
RGD
PMID:23939491
NCBI chr 9:60,931,433...60,934,252
Ensembl chr 9:60,930,875...60,935,781
G
Hdac3
histone deacetylase 3
acts_upstream_of_or_within
ISO
(PMID:24565863)
RGD
PMID:24565863
NCBI chr18:29,770,637...29,789,850
Ensembl chr18:29,770,636...29,793,856
G
Sox6
SRY-box transcription factor 6
involved_in
ISO IEA
(PMID:20081117) GO_REF:0000107
RGD Ensembl
PMID:20081117
GO_REF:0000107
NCBI chr 1:169,723,306...170,334,846
Ensembl chr 1:169,729,194...170,277,386
G
Prickle1
prickle planar cell polarity protein 1
involved_in
ISO IEA
(PMID:21199191) GO_REF:0000107
RGD Ensembl
PMID:21199191
GO_REF:0000107
NCBI chr 7:124,639,142...124,735,027
Ensembl chr 7:124,639,142...124,658,113
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Smad4
SMAD family member 4
involved_in
IEA ISO
GO_REF:0000107 (MGI:3689643|PMID:16151019)
Ensembl RGD
PMID:16151019
GO_REF:0000107 MGI:3689643
NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438
G
Hey2
hes-related family bHLH transcription factor with YRPW motif 2
involved_in
IDA
PMID:16151017
BHF-UCL
PMID:16151017
RGD:8554320
NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
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Egfr
epidermal growth factor receptor
involved_in
ISO
(PMID:23069713)
RGD
PMID:23069713
NCBI chr14:91,176,979...91,349,722
Ensembl chr14:91,177,067...91,344,382
G
Cbfb
core-binding factor subunit beta
involved_in
ISO
(MGI:3772948|PMID:18258917)
RGD
PMID:18258917
MGI:3772948
NCBI chr19:33,049,162...33,092,752
Ensembl chr19:33,049,172...33,092,751
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Hmgb1
high mobility group box 1
involved_in
ISO
(PMID:22473704)
RGD
PMID:22473704
NCBI chr12:5,972,950...5,979,658
Ensembl chr12:5,901,586...5,978,565 Ensembl chr16:5,901,586...5,978,565
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Runx1
RUNX family transcription factor 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:3772948|PMID:18258917)
UniProt RGD
PMID:18258917
GO_REF:0000024 MGI:3772948
NCBI chr11:31,839,880...32,074,427
Ensembl chr11:31,843,764...32,074,542
G
Runx3
RUNX family transcription factor 3
involved_in
ISO
(MGI:3772948|PMID:18258917)
RGD
PMID:18258917
MGI:3772948
NCBI chr 5:147,360,587...147,419,161
Ensembl chr 5:147,360,994...147,419,156
G
Slc4a2
solute carrier family 4 member 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:6840447|PMID:24515893)
UniProt RGD
PMID:24515893
GO_REF:0000024 MGI:6840447
NCBI chr 4:10,736,419...10,754,407
Ensembl chr 4:10,736,425...10,752,965
G
Socs1
suppressor of cytokine signaling 1
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:6140589|PMID:24880459) GO_REF:0000024
Ensembl RGD UniProt
PMID:24880459
GO_REF:0000024 GO_REF:0000107 MGI:6140589
NCBI chr10:4,882,651...4,884,342
Ensembl chr10:4,882,560...4,884,383
G
Zbtb7b
zinc finger and BTB domain containing 7B
involved_in
ISO
(MGI:5446998|PMID:22730529), (MGI:6140589|PMID:24880459)
RGD
PMID:22730529 PMID:24880459
MGI:5446998 MGI:6140589
NCBI chr 2:174,795,831...174,811,980
Ensembl chr 2:174,797,453...174,814,236
G
Frzb
frizzled-related protein
acts_upstream_of_or_within
ISO
(PMID:19562671)
RGD
PMID:19562671
NCBI chr 3:65,332,274...65,365,208
Ensembl chr 3:65,332,277...65,365,208
G
Nodal
nodal growth differentiation factor
acts_upstream_of_or_within
ISO
MGI:2158730 (PMID:23034635)
RGD
PMID:23034635
NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837
G
Anp32b
acidic nuclear phosphoprotein 32 family member B
involved_in
ISO IEA
(PMID:22705300) GO_REF:0000107
RGD Ensembl
PMID:22705300
GO_REF:0000107
NCBI chr 5:60,743,077...60,765,726
Ensembl chr 5:60,743,443...60,765,717
G
Ctnnb1
catenin beta 1
acts_upstream_of_or_within
ISO
MGI:2148567|MGI:3045749 (PMID:16102745)
RGD
PMID:16102745
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
G
Dll1
delta like canonical Notch ligand 1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:1861919 (PMID:10476967) (MGI:5634694|PMID:21238454)
UniProt RGD
PMID:10476967 PMID:21238454
GO_REF:0000024 MGI:5634694
NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
G
ENSRNOG00000063361
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
Ensembl chr14:14,576,818...14,579,328
G
ENSRNOG00000065688
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
Ensembl chr14:13,771,651...13,774,085
G
ENSRNOG00000067003
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
Ensembl chr14:14,122,555...14,131,850
G
Hes1
hes family bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:2149672 (PMID:17426285)
RGD
PMID:17426285
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
G
Hopx
HOP homeobox
acts_upstream_of_or_within
ISO
(PMID:17576768)
RGD
PMID:17576768
NCBI chr14:31,055,912...31,082,909
Ensembl chr14:31,075,148...31,082,909
G
Id3
inhibitor of DNA binding 3
TAS
RGD
PMID:15966691
RGD:1549434
NCBI chr 5:148,372,784...148,374,353
Ensembl chr 5:148,372,762...148,374,349
G
Jag1
jagged canonical Notch ligand 1
IDA
RGD
PMID:7697721
RGD:69863
NCBI chr 3:124,406,783...124,442,220
Ensembl chr 3:124,406,794...124,442,209
G
LOC100909936
putative PRAME family member 24-like
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr14:14,420,434...14,423,091
Ensembl chr14:14,420,441...14,423,091 Ensembl chr14:14,420,441...14,423,091
G
LOC120096510
oogenesin-1-like
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr14:13,803,173...13,805,847
Ensembl chr14:13,803,173...13,805,847
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LOC120096511
PRAME family member 8-like
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr14:14,660,677...14,663,400
Ensembl chr14:14,660,677...14,663,351
G
LOC120103107
PRAME family member 12-like
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 5:156,009,794...156,012,390
Ensembl chr 5:156,009,836...156,012,357
G
LOC134481897
PRAME family member 8-like
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
G
Mapk1
mitogen activated protein kinase 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:96382 (PMID:14970190)
Ensembl RGD
PMID:14970190
GO_REF:0000107
NCBI chr11:83,957,813...84,023,629
Ensembl chr11:83,957,813...84,023,616
G
Mir448
microRNA 448
acts_upstream_of_or_within
ISO
(PMID:20719859)
RGD
PMID:20719859
NCBI chr X:110,829,918...110,830,029
Ensembl chr X:110,829,918...110,830,029
G
Nodal
nodal growth differentiation factor
acts_upstream_of_or_within
ISO
(PMID:11456449)
RGD
PMID:11456449
NCBI chr20:29,368,436...29,376,837
Ensembl chr20:29,368,436...29,376,837
G
Notch3
notch receptor 3
acts_upstream_of_or_within
ISO
(PMID:15064243)
RGD
PMID:15064243
NCBI chr 7:11,132,984...11,184,025
Ensembl chr 7:11,133,706...11,184,025
G
Oog1
oogenesin 1
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 5:155,841,222...155,844,210
Ensembl chr 5:155,838,197...155,843,863
G
Oog3
oogenesin 3
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 5:155,941,965...155,950,037
Ensembl chr 5:155,944,580...155,950,437
G
Oog3l1
oogenesin 3 like 1
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 5:156,075,011...156,081,595
Ensembl chr 5:156,075,011...156,081,591
G
P2ry12
purinergic receptor P2Y12
IMP
RGD
PMID:15056287
RGD:1580185
NCBI chr 2:143,481,468...143,523,340
Ensembl chr 2:143,481,430...143,523,361
G
Pou4f2
POU class 4 homeobox 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:5316576|PMID:21875655)
UniProt RGD
PMID:21875655
GO_REF:0000024 MGI:5316576
NCBI chr19:29,486,686...29,490,327
Ensembl chr19:29,486,686...29,490,327
G
Pou5f1
POU class 5 homeobox 1
acts_upstream_of_or_within
ISO
MGI:1201683 (PMID:16325584)
RGD
PMID:16325584
NCBI chr20:3,223,128...3,227,891
Ensembl chr20:3,223,129...3,227,891
G
Pramef12
PRAME family member 12
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 5:156,193,666...156,197,199
Ensembl chr 5:156,193,745...156,197,195
G
Pramef12-ps1
PRAME family member 12, pseudogene 1
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 5:116,534,373...116,537,110
Ensembl chr 5:116,534,401...116,537,096 Ensembl chr 5:116,534,401...116,537,096
G
Pramef17
PRAME family member 17
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 5:156,138,800...156,142,916
Ensembl chr 5:156,139,194...156,141,969
G
Pramef20
PRAME family member 20
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 5:156,171,125...156,175,601
Ensembl chr 5:156,171,125...156,175,601
G
Pramef20-ps1
PRAME family member 20, pseudogene 1
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr14:13,750,179...13,752,838
Ensembl chr14:13,750,179...13,752,838 Ensembl chr14:13,750,179...13,752,838
G
Pramef20l1
PRAME family member 20 like 1
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr14:14,058,560...14,061,218
Ensembl chr14:14,058,525...14,061,218
G
Pramef25
PRAME family member 25
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 5:156,157,471...156,167,485
Ensembl chr 5:156,162,680...156,167,485
G
Pramef27
PRAME family member 27
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 5:155,752,765...155,759,663
Ensembl chr 5:155,756,015...155,759,663
G
Pramef5
PRAME family member 5
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 5:155,905,179...155,907,727
Ensembl chr 5:155,904,697...155,907,818
G
Pramef8
PRAME family member 8
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 5:155,778,156...155,793,935
Ensembl chr 5:155,778,201...155,793,932
G
Pramef8l1
PRAME family member 8 like 1
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr14:14,013,198...14,015,825
Ensembl chr14:14,013,198...14,015,825
G
Pramef8l2
PRAME family member 8 like 2
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr14:13,915,149...13,922,618
Ensembl chr14:13,915,149...13,917,904
G
Pramef8l3
PRAME family member 8 like 3
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr14:14,458,467...14,461,102
Ensembl chr14:14,458,467...14,461,102
G
Pramel34l
PRAME like 34 like
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr X:92,036,766...92,038,211
Ensembl chr X:92,036,766...92,038,211
G
Pramel36
PRAME like 36
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr14:13,790,596...13,793,232
Ensembl chr14:13,790,596...13,793,232
G
Pramel36l1
PRAME like 36 like 1
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr14:13,764,299...13,767,174
Ensembl chr14:13,764,299...13,767,011
G
Pramel38
PRAME like 38
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr14:14,165,928...14,168,560
Ensembl chr14:14,165,928...14,168,560
G
Pramel38l2
PRAME like 38 like 2
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr14:14,715,922...14,718,579
Ensembl chr14:14,715,929...14,718,579
G
Pramel53
PRAME like 53
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr14:14,589,069...14,591,723
Ensembl chr14:14,585,574...14,591,723
G
Pramel53l1
PRAMEL 53 like 1
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr14:14,029,642...14,032,337
Ensembl chr14:14,029,642...14,032,289
G
Pramel6
preferentially expressed antigen in melanoma-like 6
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 3:72,885,018...72,888,490
Ensembl chr 3:72,885,018...72,888,490
G
Pramel7
preferentially expressed antigen in melanoma-like 7
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 3:72,870,763...72,873,735
Ensembl chr 3:72,870,763...72,873,735
G
Pramex1
PRAME like, X-linked 1
involved_in
ISO
(PMID:16179254)
RGD
PMID:16179254
NCBI chr X:98,567,994...98,574,654
Ensembl chr X:98,569,415...98,572,096
G
Prmt5
protein arginine methyltransferase 5
IMP
RGD
PMID:21917714
RGD:9491825
NCBI chr15:27,968,893...27,978,291
Ensembl chr15:27,968,910...27,978,296
G
Rara
retinoic acid receptor, alpha
acts_upstream_of_or_within
ISO
(PMID:10684250)
RGD
PMID:10684250
NCBI chr10:83,883,490...83,928,932
Ensembl chr10:83,893,384...83,928,142
G
Rarg
retinoic acid receptor, gamma
acts_upstream_of_or_within
ISO
(PMID:10684250)
RGD
PMID:10684250
NCBI chr 7:133,367,833...133,390,301
Ensembl chr 7:133,367,833...133,390,177
G
Rbpj
recombination signal binding protein for immunoglobulin kappa J region
acts_upstream_of_or_within
ISO
MGI:1857411|MGI:3583755 (PMID:10476967), (PMID:17015435)
RGD
PMID:10476967 PMID:17015435
NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353
G
Shh
sonic hedgehog signaling molecule
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Sinhcaf
SIN3-HDAC complex associated factor
involved_in
ISO
(MGI:5908475|PMID:28554894)
RGD
PMID:28554894
MGI:5908475
NCBI chr 4:181,888,301...181,913,294
Ensembl chr 4:181,888,312...181,910,276
G
Skil
SKI-like proto-oncogene
acts_upstream_of_or_within
ISO
(PMID:17215516)
RGD
PMID:17215516
NCBI chr 2:112,247,047...112,275,176
Ensembl chr 2:112,247,051...112,275,080
G
Sox2
SRY-box transcription factor 2
acts_upstream_of_or_within
ISO
(PMID:17507372)
RGD
PMID:17507372
NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338
G
Suz12
SUZ12 polycomb repressive complex 2 subunit
involved_in
ISO
(PMID:19847889)
RGD
PMID:19847889
NCBI chr10:64,967,035...65,012,916
Ensembl chr10:64,966,967...65,012,738
G
Tbx1
T-box transcription factor 1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:2179136 (PMID:19745164)
UniProt RGD
PMID:19745164
GO_REF:0000024
NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
G
Tent5c
terminal nucleotidyltransferase 5C
involved_in
ISO IEA ISS
(PMID:32433990) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:32433990
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:187,853,026...187,875,260
Ensembl chr 2:187,853,024...187,894,744
G
Terc
telomerase RNA component
IMP
RGD
PMID:16424384
RGD:2291976
NCBI chr 2:112,815,654...112,816,041
G
Tgfb1
transforming growth factor, beta 1
involved_in
ISO
(PMID:19357233)
RGD
PMID:19357233
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
G
Tunar
TCL1 upstream neural differentiation-associated RNA
acts_upstream_of_or_within
ISO
(PMID:24530304)
RGD
PMID:24530304
NCBI chr 6:124,245,949...124,293,440
G
Twist1
twist family bHLH transcription factor 1
involved_in
ISO
(MGI:1201268|PMID:9520323)
RGD
PMID:9520323
MGI:1201268
NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653
G
Wnt1
Wnt family member 1
involved_in
ISO
(MGI:5486577|PMID:9473323)
RGD
PMID:9473323
MGI:5486577
NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651
G
Wnt4
Wnt family member 4
acts_upstream_of_or_within
ISO
MGI:1857453 (PMID:15581876)
RGD
PMID:15581876
NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859
G
Elf5
E74 like ETS transcription factor 5
acts_upstream_of_or_within
ISO
(PMID:24859262)
RGD
PMID:24859262
NCBI chr 3:89,808,837...89,836,977
Ensembl chr 3:89,797,880...89,836,973
G
Snai1
snail family transcriptional repressor 1
acts_upstream_of_or_within
ISO
(PMID:9676199)
RGD
PMID:9676199
NCBI chr 3:156,248,479...156,252,969
Ensembl chr 3:156,248,485...156,252,969
G
Glis1
GLIS family zinc finger 1
involved_in
ISO
(MGI:6294234|PMID:30544251)
RGD
PMID:30544251
MGI:6294234
NCBI chr 5:122,222,155...122,412,141
Ensembl chr 5:122,222,128...122,412,141
G
Nanog
Nanog homeobox
acts_upstream_of_or_within
ISO
MGI:109452 (PMID:16801560)
RGD
PMID:16801560
NCBI chr 4:155,943,737...155,951,116
Ensembl chr 4:155,943,737...155,951,116
G
Nkx6-2
NK6 homeobox 2
acts_upstream_of_or_within
ISO
MGI:2651850 (PMID:11567614)
RGD
PMID:11567614
NCBI chr 1:194,380,149...194,383,533
Ensembl chr 1:194,381,975...194,383,515
G
Sostdc1
sclerostin domain containing 1
acts_upstream_of_or_within
ISO
MGI:3604658 (PMID:22509524)
RGD
PMID:22509524
NCBI chr 6:53,051,336...53,055,510
Ensembl chr 6:53,051,354...53,055,579
G
Spdef
SAM pointed domain containing ets transcription factor
acts_upstream_of_or_within
ISO
MGI:4398888 (PMID:19759516)
RGD
PMID:19759516
NCBI chr20:5,771,440...5,785,893
Ensembl chr20:5,771,441...5,785,893
G
Hes1
hes family bHLH transcription factor 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2149672 (PMID:11425898)
Ensembl RGD
PMID:11425898
GO_REF:0000107
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
G
Gfi1
growth factor independent 1 transcriptional repressor
acts_upstream_of_or_within
ISO
MGI:2449921 (PMID:16230531)
RGD
PMID:16230531
NCBI chr14:2,040,576...2,056,874
Ensembl chr14:2,042,434...2,051,814
G
Cav3
caveolin 3
IMP
RGD
PMID:21170593
RGD:6784534
NCBI chr 4:145,582,168...145,598,142
Ensembl chr 4:145,582,060...145,598,137
G
Ctdp1
CTD phosphatase subunit 1
IMP
RGD
PMID:22569295
RGD:9686371
NCBI chr18:73,854,277...73,916,232
Ensembl chr18:73,854,282...73,916,457
G
Foxp1
forkhead box P1
IMP
RGD
PMID:26333362
RGD:11561912
NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258
G
G6pd
glucose-6-phosphate dehydrogenase
IMP
RGD
PMID:24190878
RGD:10449133
NCBI chr X:152,201,081...152,220,863
Ensembl chr X:152,201,098...152,220,801
G
Gsk3a
glycogen synthase kinase 3 alpha
involved_in
ISO IEA
(MGI:4829580|PMID:20516643) GO_REF:0000107
RGD Ensembl
PMID:20516643
GO_REF:0000107 MGI:4829580
NCBI chr 1:80,815,843...80,825,732
Ensembl chr 1:80,815,850...80,825,802
G
Mir451a
microRNA 451a
IMP
RGD
PMID:25209900
RGD:11558015
NCBI chr10:62,961,520...62,961,591
Ensembl chr10:62,961,520...62,961,591
G
Pak1
p21 (RAC1) activated kinase 1
IMP
RGD
PMID:22082674
RGD:11533929
NCBI chr 1:152,111,172...152,226,390
Ensembl chr 1:152,111,188...152,226,383
G
Pi16
peptidase inhibitor 16
acts_upstream_of_or_within
ISO
(PMID:17909105)
RGD
PMID:17909105
NCBI chr20:7,376,073...7,385,386
Ensembl chr20:7,376,126...7,385,383
G
Ppara
peroxisome proliferator activated receptor alpha
IMP
RGD
PMID:22198280
RGD:5687133
NCBI chr 7:116,832,405...116,900,878
Ensembl chr 7:116,832,756...116,895,346
G
Rbm10
RNA binding motif protein 10
IMP
RGD
PMID:30257214
RGD:151667449
NCBI chr X:1,540,399...1,572,571
Ensembl chr X:1,540,398...1,572,575
G
Rgs2
regulator of G-protein signaling 2
IMP
RGD
PMID:16380388
RGD:13524577
NCBI chr13:55,799,749...55,802,354
Ensembl chr13:55,798,829...55,802,385
G
Rgs4
regulator of G-protein signaling 4
IDA
RGD
PMID:9918533
RGD:7207376
NCBI chr13:81,936,775...81,943,103
Ensembl chr13:81,936,775...81,943,068
G
Tomm70
translocase of outer mitochondrial membrane 70
IMP
RGD
PMID:25022898
RGD:13464131
NCBI chr11:43,378,719...43,417,166
Ensembl chr11:43,377,216...43,417,202
G
Yy1
YY1 transcription factor
IMP
RGD
PMID:18632988
RGD:9588273
NCBI chr 6:127,706,739...127,736,499
Ensembl chr 6:127,707,596...127,732,747
G
Zfp418
zinc finger protein 418
acts_upstream_of_or_within
ISO
(PMID:29065170)
RGD
PMID:29065170
NCBI chr 1:66,581,406...66,594,247
Ensembl chr 1:66,581,287...66,594,242
G
Pthlh
parathyroid hormone-like hormone
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:90087) GO_REF:0000107
RGD Ensembl
PMID:90087
GO_REF:0000107
NCBI chr 4:180,188,792...180,199,847
Ensembl chr 4:180,188,792...180,199,847
G
Rflna
refilin A
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:1923816 (PMID:24436304)
GO_Central RGD
PMID:24436304
GO_REF:0000033
NCBI chr12:31,633,360...31,642,313
Ensembl chr12:31,633,361...31,642,317
G
Rflnb
refilin B
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:1920371 (PMID:24436304)
GO_Central RGD
PMID:24436304
GO_REF:0000033
NCBI chr10:60,893,693...60,899,970
Ensembl chr10:60,893,713...60,899,976
G
Adamts12
ADAM metallopeptidase with thrombospondin type 1 motif, 12
involved_in
ISO
(PMID:22247065)
RGD
PMID:22247065
NCBI chr 2:60,032,873...60,327,629
Ensembl chr 2:60,032,873...60,327,629
G
Adamts7
ADAM metallopeptidase with thrombospondin type 1 motif, 7
involved_in
ISO
(PMID:22247065)
RGD
PMID:22247065
NCBI chr 8:90,704,727...90,744,333
Ensembl chr 8:90,704,727...90,744,328
G
Bmp4
bone morphogenetic protein 4
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:17481601)
Ensembl RGD
PMID:17481601
GO_REF:0000107
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Ccn4
cellular communication network factor 4
involved_in
IEA ISO
GO_REF:0000107 (MGI:6294593|PMID:15331410)
Ensembl RGD
PMID:15331410
GO_REF:0000107 MGI:6294593
NCBI chr 7:98,645,238...98,677,253
Ensembl chr 7:98,645,182...98,677,248
G
Chadl
chondroadherin-like
involved_in
ISO
(MGI:5617405|PMID:25451920)
RGD
PMID:25451920
MGI:5617405
NCBI chr 7:113,205,323...113,218,678
Ensembl chr 7:113,210,748...113,217,272
G
Ctnnb1
catenin beta 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2148591|MGI:2148594|MGI:2446084|MGI:2450929 (PMID:15866163), (PMID:16818445)
Ensembl RGD
PMID:15866163 PMID:16818445
GO_REF:0000107
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
G
Efemp1
EGF containing fibulin extracellular matrix protein 1
involved_in
ISO IEA ISS
(PMID:20005202) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:20005202
GO_REF:0000024 GO_REF:0000107
NCBI chr14:102,610,813...102,690,027
Ensembl chr14:102,610,908...102,690,018
G
Gdf5
growth differentiation factor 5
involved_in
ISO
(PMID:21976273)
RGD
PMID:21976273
NCBI chr 3:144,454,316...144,458,508
Ensembl chr 3:144,454,338...144,458,612
G
Gli2
GLI family zinc finger 2
acts_upstream_of_or_within
ISO
MGI:1857509 (PMID:17328886)
RGD
PMID:17328886
NCBI chr13:29,946,882...30,163,589
Ensembl chr13:29,946,809...30,163,574
G
Gli3
GLI family zinc finger 3
acts_upstream_of_or_within
ISO
MGI:96533 (PMID:16284117)
RGD
PMID:16284117
NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
G
Grem1
gremlin 1, DAN family BMP antagonist
involved_in
ISO
(PMID:10556075)
RGD
PMID:10556075
NCBI chr 3:100,512,317...100,524,001
Ensembl chr 3:100,512,313...100,524,082
G
Ihh
Indian hedgehog signaling molecule
acts_upstream_of_or_within
ISO
MGI:1934258 (PMID:16284117)
RGD
PMID:16284117
NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532
G
Ltbp3
latent transforming growth factor beta binding protein 3
acts_upstream_of_or_within
ISO
MGI:2180017 (PMID:11790802)
RGD
PMID:11790802
NCBI chr 1:203,029,412...203,045,975
Ensembl chr 1:203,029,877...203,045,975
G
Mkx
mohawk homeobox
IMP
RGD
PMID:27370800
RGD:40924660
NCBI chr17:55,077,073...55,156,877
Ensembl chr17:55,077,540...55,156,124
G
Nkx3-2
NK3 homeobox 2
involved_in
ISO
(MGI:3617032|PMID:16421188)
RGD
PMID:16421188
MGI:3617032
NCBI chr14:69,183,795...69,186,182
Ensembl chr14:69,183,820...69,186,061
G
Pth
parathyroid hormone
involved_in
IMP
PMID:11604398
CAFA
PMID:11604398
RGD:12793028
NCBI chr 1:167,508,121...167,511,530
Ensembl chr 1:167,508,598...167,511,530
G
Pthlh
parathyroid hormone-like hormone
acts_upstream_of_or_within
ISO
(PMID:90087) MGI:2154515|MGI:95728 (PMID:17328886), (PMID:8895385)
RGD
PMID:90087 PMID:8895385 PMID:17328886
NCBI chr 4:180,188,792...180,199,847
Ensembl chr 4:180,188,792...180,199,847
G
Ptpn11
protein tyrosine phosphatase, non-receptor type 11
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:6414736|PMID:29644115)
UniProt Ensembl RGD
PMID:29644115
GO_REF:0000024 GO_REF:0000107 MGI:6414736
NCBI chr12:35,365,436...35,424,925
Ensembl chr12:35,383,144...35,424,925
G
Rarb
retinoic acid receptor, beta
acts_upstream_of_or_within
ISO
(PMID:10684250)
RGD
PMID:10684250
NCBI chr15:8,700,533...9,051,288
Ensembl chr15:8,406,492...9,051,288
G
Rarg
retinoic acid receptor, gamma
acts_upstream_of_or_within
ISO
(PMID:10684250)
RGD
PMID:10684250
NCBI chr 7:133,367,833...133,390,301
Ensembl chr 7:133,367,833...133,390,177
G
Snai2
snail family transcriptional repressor 2
involved_in
ISO
(PMID:19756381)
RGD
PMID:19756381
NCBI chr11:86,182,788...86,186,203
Ensembl chr11:86,181,909...86,186,200
G
Sox9
SRY-box transcription factor 9
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:2158693 (PMID:11371614)
UniProt RGD
PMID:11371614
GO_REF:0000024
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
G
Tgfbr1
transforming growth factor, beta receptor 1
involved_in
ISO IEA
(MGI:3848261|PMID:19494318) GO_REF:0000107
RGD Ensembl
PMID:19494318
GO_REF:0000107 MGI:3848261
NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
G
Wnt9a
Wnt family member 9A
acts_upstream_of_or_within
ISO
MGI:3701350|MGI:88276 (PMID:16818445)
RGD
PMID:16818445
NCBI chr10:44,094,140...44,121,134
Ensembl chr10:44,094,140...44,121,133
G
Bcl11a
BCL11 transcription factor A
involved_in
ISO
(PMID:19616629)
RGD
PMID:19616629
NCBI chr14:98,029,018...98,124,181
Ensembl chr14:98,030,461...98,124,180
G
Epha7
Eph receptor A7
involved_in
ISO IEA
(MGI:5426777|PMID:19036963) GO_REF:0000107
RGD Ensembl
PMID:19036963
GO_REF:0000107 MGI:5426777
NCBI chr 5:42,975,353...43,128,703
Ensembl chr 5:42,975,405...43,127,112
G
Fgf13
fibroblast growth factor 13
involved_in
ISS ISO
GO_REF:0000024 (MGI:5431268|PMID:22726441)
UniProt RGD
PMID:22726441
GO_REF:0000024 MGI:5431268
NCBI chr X:137,276,498...137,800,056
Ensembl chr X:137,276,511...137,800,391
G
Fstl4
follistatin-like 4
acts_upstream_of_or_within
ISO
(PMID:24573299)
RGD
PMID:24573299
NCBI chr10:36,911,422...37,344,545
Ensembl chr10:36,911,420...37,338,588
G
Ifrd1
interferon-related developmental regulator 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:97321 (PMID:18052984)
Ensembl RGD
PMID:18052984
GO_REF:0000107
NCBI chr 6:57,269,395...57,317,833
Ensembl chr 6:57,269,384...57,288,990
G
Ptprs
protein tyrosine phosphatase, receptor type, S
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:5431284|PMID:22519304)
UniProt Ensembl RGD
PMID:22519304
GO_REF:0000024 GO_REF:0000107 MGI:5431284
NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947
G
Rgma
repulsive guidance molecule BMP co-receptor a
IMP
RGD
PMID:23744345
RGD:9850124
NCBI chr 1:127,128,934...127,172,918
Ensembl chr 1:127,128,934...127,172,918
G
Ulk1
unc-51 like autophagy activating kinase 1
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:17389358)
GO_Central RGD
PMID:17389358
GO_REF:0000033
NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
G
Ulk2
unc-51 like autophagy activating kinase 2
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:17389358)
GO_Central RGD
PMID:17389358
GO_REF:0000033
NCBI chr10:46,451,578...46,530,462
Ensembl chr10:46,454,030...46,530,407
G
Spart
spartin
acts_upstream_of_or_within
ISO
MGI:1919205|MGI:5430946 (PMID:22619377)
RGD
PMID:22619377
NCBI chr 2:139,292,630...139,319,248
Ensembl chr 2:139,292,355...139,319,248
G
Spp1
secreted phosphoprotein 1
IEP
RGD
PMID:15625076
RGD:1581125
NCBI chr14:5,308,885...5,315,120
Ensembl chr14:5,308,885...5,315,162
G
Lilrb4
leukocyte immunoglobulin like receptor B4
involved_in
ISO
(PMID:16493035)
RGD
PMID:16493035
NCBI chr 1:69,805,020...69,810,628
Ensembl chr 1:69,805,250...69,810,660
G
Cit
citron rho-interacting serine/threonine kinase
acts_upstream_of_or_within
ISO
(PMID:12781320)
RGD
PMID:12781320
NCBI chr12:40,603,073...40,764,846
Ensembl chr12:40,605,563...40,763,860
G
Dpysl5
dihydropyrimidinase-like 5
involved_in
ISO
(PMID:33894126)
RGD
PMID:33894126
NCBI chr 6:25,575,104...25,659,422
Ensembl chr 6:25,575,104...25,659,422
G
Gorasp1
golgi reassembly stacking protein 1
involved_in
IEA IMP ISO
GO_REF:0000107 PMID:21572988 (PMID:21572988)
Ensembl RGD
PMID:21572988 PMID:21572988
GO_REF:0000107, RGD:8554449
NCBI chr 8:119,655,267...119,667,022
Ensembl chr 8:119,655,268...119,666,972
G
Gsk3b
glycogen synthase kinase 3 beta
IMP
RGD
PMID:17182785
RGD:2301767
NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
G
Id1
inhibitor of DNA binding 1
IMP
RGD
PMID:19167333
RGD:2306262
NCBI chr 3:141,210,666...141,212,420
Ensembl chr 3:141,211,267...141,212,419
G
Mt3
metallothionein 3
involved_in
NAS
PMID:12460603
UniProt
PMID:12460603
RGD:727475
NCBI chr19:10,848,754...10,850,158
Ensembl chr19:10,848,755...10,850,158
G
Nfatc4
nuclear factor of activated T-cells 4
acts_upstream_of_or_within
ISO
(PMID:23407945)
RGD
PMID:23407945
NCBI chr15:29,286,998...29,314,610
Ensembl chr15:29,305,535...29,314,610
G
Ppp3ca
protein phosphatase 3 catalytic subunit alpha
acts_upstream_of_or_within
ISO
(PMID:23407945)
RGD
PMID:23407945
NCBI chr 2:225,165,981...225,440,978
Ensembl chr 2:225,165,766...225,438,974
G
Rapgef2
Rap guanine nucleotide exchange factor 2
involved_in
ISO ISS
(PMID:16272156) (MGI:5499726|PMID:16272156) GO_REF:0000024
RGD UniProt
PMID:16272156
GO_REF:0000024 MGI:5499726
NCBI chr 2:164,207,513...164,322,157
Ensembl chr 2:164,207,513...164,244,247
G
Tlx2
T-cell leukemia homeobox 2
acts_upstream_of_or_within
ISO
(PMID:9738002)
RGD
PMID:9738002
NCBI chr 4:115,573,736...115,576,097
Ensembl chr 4:115,573,799...115,575,642
G
Trpc5
transient receptor potential cation channel, subfamily C, member 5
IMP
RGD
PMID:22764246
RGD:10044012
NCBI chr X:107,946,163...108,230,991
Ensembl chr X:107,939,131...108,230,991
G
Trpc6
transient receptor potential cation channel, subfamily C, member 6
IMP
RGD
PMID:22764246
RGD:10044012
NCBI chr 8:5,759,387...5,864,000
Ensembl chr 8:5,758,935...5,828,092
G
Ywhah
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:9738002)
Ensembl RGD
PMID:9738002
GO_REF:0000107
NCBI chr14:77,696,332...77,705,715
Ensembl chr14:77,696,333...77,705,741
G
RT1-M3-1
RT1 class Ib, locus M3, gene 1
involved_in
ISO
(PMID:20702625)
RGD
PMID:20702625
NCBI chr20:1,323,976...1,328,126
Ensembl chr20:1,287,521...1,328,117
G
Tmem176a
transmembrane protein 176A
acts_upstream_of_or_within
ISO
(PMID:20501748)
RGD
PMID:20501748
NCBI chr 4:77,774,940...77,778,620
Ensembl chr 4:77,774,843...77,778,620
G
Tmem176b
transmembrane protein 176B
involved_in acts_upstream_of_or_within
IEA ISO IBA
GO_REF:0000118 (PMID:20501748) GO_REF:0000033
TreeGrafter RGD GO_Central
PMID:20501748
GO_REF:0000033 GO_REF:0000118
NCBI chr 4:77,766,928...77,774,740
Ensembl chr 4:77,766,928...77,774,384
G
Zbtb46
zinc finger and BTB domain containing 46
acts_upstream_of_or_within
ISO
MGI:5320483 (PMID:22615127)
RGD
PMID:22615127
NCBI chr 3:168,497,294...168,567,799
Ensembl chr 3:168,499,583...168,568,782
G
Gsk3b
glycogen synthase kinase 3 beta
IMP
RGD
PMID:15522889
RGD:10045566
NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
G
Id2
inhibitor of DNA binding 2
acts_upstream_of_or_within
ISO
MGI:3830733 (PMID:19109490)
RGD
PMID:19109490
NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400
G
Shh
sonic hedgehog signaling molecule
involved_in
IEA ISO
GO_REF:0000107 (MGI:3836885|PMID:19122665)
Ensembl RGD
PMID:19122665
GO_REF:0000107 MGI:3836885
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Wnt3a
Wnt family member 3A
involved_in
ISO
(MGI:2679774|PMID:14557550)
RGD
PMID:14557550
MGI:2679774
NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324
G
Fzd7
frizzled class receptor 7
involved_in
ISO
(PMID:18681827)
RGD
PMID:18681827
NCBI chr 9:60,931,433...60,934,252
Ensembl chr 9:60,930,875...60,935,781
G
Col5a1
collagen type V alpha 1 chain
involved_in
ISO IEA
(PMID:23154389) GO_REF:0000107
RGD Ensembl
PMID:23154389
GO_REF:0000107
NCBI chr 3:11,208,429...11,356,715
Ensembl chr 3:11,208,512...11,354,588
G
Col5a2
collagen type V alpha 2 chain
involved_in
ISO
(PMID:23154389)
RGD
PMID:23154389
NCBI chr 9:47,448,741...47,598,134
Ensembl chr 9:47,448,736...47,598,154
G
Mesp1
mesoderm posterior bHLH transcription factor 1
involved_in
ISO
(MGI:4441249|PMID:18593560)
RGD
PMID:18593560
MGI:4441249
NCBI chr 1:133,738,357...133,739,875
Ensembl chr 1:133,738,357...133,739,875
G
Acvrl1
activin A receptor like type 1
involved_in
ISO
(MGI:4830635|PMID:20406889)
RGD
PMID:20406889
MGI:4830635
NCBI chr 7:132,239,200...132,256,592
Ensembl chr 7:132,239,729...132,256,591
G
Id1
inhibitor of DNA binding 1
IMP
RGD
PMID:20830586
RGD:9686141
NCBI chr 3:141,210,666...141,212,420
Ensembl chr 3:141,211,267...141,212,419
G
Jag1
jagged canonical Notch ligand 1
involved_in
IEA ISO
GO_REF:0000107 (MGI:5661129|PMID:25535084)
Ensembl RGD
PMID:25535084
GO_REF:0000107 MGI:5661129
NCBI chr 3:124,406,783...124,442,220
Ensembl chr 3:124,406,794...124,442,209
G
Mir1
microRNA 1
involved_in
ISO
(PMID:23939491)
RGD
PMID:23939491
NCBI chr18:1,887,537...1,887,623
G
Mir1b
microRNA 1b
involved_in
ISO
(PMID:23939491)
RGD
PMID:23939491
NCBI chr 3:167,487,117...167,487,201
Ensembl chr 3:167,487,117...167,487,201
G
Notch4
notch receptor 4
involved_in
ISO
(MGI:1934537|PMID:11344305)
RGD
PMID:11344305
MGI:1934537
NCBI chr20:4,160,362...4,184,466
Ensembl chr20:4,160,445...4,184,465
G
Tgfbr1
transforming growth factor, beta receptor 1
IMP
RGD
PMID:17450384
RGD:2302022
NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
G
Vhl
von Hippel-Lindau tumor suppressor
acts_upstream_of_or_within
ISO
MGI:2136645|MGI:3608931 (PMID:25186293)
RGD
PMID:25186293
NCBI chr 4:146,772,483...146,779,376
Ensembl chr 4:146,772,468...146,779,377
G
Xdh
xanthine dehydrogenase
involved_in
IEA ISO
GO_REF:0000107 (PMID:18386220)
Ensembl RGD
PMID:18386220
GO_REF:0000107
NCBI chr 6:21,530,463...21,592,172
Ensembl chr 6:21,530,113...21,592,268
G
Zeb1
zinc finger E-box binding homeobox 1
involved_in
ISO IEA
(PMID:23765923) GO_REF:0000107
RGD Ensembl
PMID:23765923
GO_REF:0000107
NCBI chr17:51,948,948...52,116,018
Ensembl chr17:51,948,948...52,115,214
G
Dll1
delta like canonical Notch ligand 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:3793982|PMID:17960184)
UniProt RGD
PMID:17960184
GO_REF:0000024 MGI:3793982
NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
G
Ezh2
enhancer of zeste 2 polycomb repressive complex 2 subunit
acts_upstream_of_or_within
ISO
MGI:2661097 (PMID:19303854)
RGD
PMID:19303854
NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
G
Gdf3
growth differentiation factor 3
involved_in
ISO
(PMID:18823971)
RGD
PMID:18823971
NCBI chr 4:155,831,572...155,835,953
Ensembl chr 4:155,830,909...155,835,937
G
Cav1
caveolin 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2180364 (PMID:12388746)
Ensembl RGD
PMID:12388746
GO_REF:0000107
NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705
G
Ccnd1
cyclin D1
involved_in
IEA ISO
GO_REF:0000107 MGI:88039 (PMID:15314168)
Ensembl RGD
PMID:15314168
GO_REF:0000107
NCBI chr 1:200,089,002...200,098,524
Ensembl chr 1:200,089,002...200,098,602
G
Csf1r
colony stimulating factor 1 receptor
IMP
RGD
PMID:18987110
RGD:2314607
NCBI chr18:54,546,673...54,590,418
Ensembl chr18:54,546,659...54,590,415
G
Dll1
delta like canonical Notch ligand 1
involved_in
ISO ISS
(MGI:5296438|PMID:21915337) GO_REF:0000024
RGD UniProt
PMID:21915337
GO_REF:0000024 MGI:5296438
NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
G
Fgf10
fibroblast growth factor 10
acts_upstream_of_or_within
ISO
(PMID:14604677)
RGD
PMID:14604677
NCBI chr 2:50,801,171...50,878,218
Ensembl chr 2:50,800,992...50,876,866
G
Fst
follistatin
acts_upstream_of_or_within
ISO
MGI:1857467|MGI:88180 (PMID:15525533)
RGD
PMID:15525533
NCBI chr 2:46,123,260...46,130,584
Ensembl chr 2:46,123,439...46,130,571
G
Ifng
interferon gamma
involved_in
IDA
PMID:20624457
BHF-UCL
PMID:20624457
RGD:8554478
NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375
G
Kras
KRAS proto-oncogene, GTPase
acts_upstream_of_or_within
ISO
(PMID:24058167)
RGD
PMID:24058167
NCBI chr 4:178,185,418...178,218,484
G
Nkx6-3
NK6 homeobox 3
acts_upstream_of_or_within
ISO
MGI:3795186 (PMID:18347062)
RGD
PMID:18347062
NCBI chr16:68,868,404...68,873,617
Ensembl chr16:68,868,404...68,873,617
G
Osr1
odd-skipped related transcription factor 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:3697513|PMID:16790474)
UniProt RGD
PMID:16790474
GO_REF:0000024 MGI:3697513
NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817
G
Six2
SIX homeobox 2
acts_upstream_of_or_within
ISO
MGI:3691857 (PMID:17036046)
RGD
PMID:17036046
NCBI chr 6:8,974,859...8,981,345
Ensembl chr 6:8,967,157...8,981,193
G
Smo
smoothened, frizzled class receptor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1934268|MGI:2445832 (PMID:17199044)
Ensembl RGD
PMID:17199044
GO_REF:0000107
NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829
G
Sox9
SRY-box transcription factor 9
acts_upstream_of_or_within
ISO
MGI:2385468 (PMID:24058167)
RGD
PMID:24058167
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
G
Tbx3
T-box transcription factor 3
acts_upstream_of_or_within
ISO
MGI:3769504 (PMID:18356246)
RGD
PMID:18356246
NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708
G
Yap1
Yes1 associated transcriptional regulator
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:17980593)
Ensembl RGD
PMID:17980593
GO_REF:0000107
NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010
G
Zeb1
zinc finger E-box binding homeobox 1
acts_upstream_of_or_within
ISO
(PMID:18192284)
RGD
PMID:18192284
NCBI chr17:51,948,948...52,116,018
Ensembl chr17:51,948,948...52,115,214
G
Mmp9
matrix metallopeptidase 9
involved_in
IEA ISO
GO_REF:0000107 (MGI:6270954|PMID:24503540)
Ensembl RGD
PMID:24503540
GO_REF:0000107 MGI:6270954
NCBI chr 3:153,684,158...153,692,118
Ensembl chr 3:153,683,858...153,692,120
G
Adipor1
adiponectin receptor 1
involved_in
ISO
(PMID:23776679)
RGD
PMID:23776679
NCBI chr13:45,859,461...45,879,248
Ensembl chr13:45,859,533...45,879,241
G
Dab2ip
DAB2 interacting protein
involved_in
ISO IEA ISS
(PMID:20080667), (PMID:20154697) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:20080667 PMID:20154697
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:18,915,290...19,086,282
Ensembl chr 3:18,915,290...19,086,280
G
Dact3
dishevelled-binding antagonist of beta-catenin 3
acts_upstream_of_or_within
ISO
MGI:5515616 (PMID:23580654)
RGD
PMID:23580654
NCBI chr 1:77,546,900...77,558,631
Ensembl chr 1:77,546,900...77,558,630
G
Efna1
ephrin A1
involved_in
ISO
(MGI:4847981|PMID:20960543)
RGD
PMID:20960543
MGI:4847981
NCBI chr 2:174,681,676...174,689,061
Ensembl chr 2:174,681,682...174,690,866
G
Epha4
Eph receptor A4
involved_in
ISO
(PMID:29093007)
RGD
PMID:29093007
NCBI chr 9:78,815,460...78,958,139
Ensembl chr 9:78,815,460...78,958,139
G
Foxa1
forkhead box A1
involved_in
IEA ISO
GO_REF:0000107 (PMID:20160041)
Ensembl RGD
PMID:20160041
GO_REF:0000107
NCBI chr 6:75,099,907...75,136,534
Ensembl chr 6:75,103,503...75,136,188
G
Foxa2
forkhead box A2
involved_in
IEA ISO
GO_REF:0000107 (PMID:20160041)
Ensembl RGD
PMID:20160041
GO_REF:0000107
NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326
G
Gata3
GATA binding protein 3
acts_upstream_of
ISO
(PMID:26451614)
RGD
PMID:26451614
NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
G
Hpn
hepsin
involved_in
ISS IBA IEA ISO
GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 GO_REF:0000107 (PMID:19843851)
UniProt GO_Central TreeGrafter Ensembl RGD
PMID:19843851
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118
NCBI chr 1:86,337,085...86,352,785
Ensembl chr 1:86,337,087...86,352,811
G
Il17rd
interleukin 17 receptor D
involved_in
ISO
(MGI:6414689|PMID:25576668)
RGD
PMID:25576668
MGI:6414689
NCBI chr16:2,228,438...2,295,122
Ensembl chr16:2,228,287...2,292,556
G
Kat8
lysine acetyltransferase 8
involved_in
ISO ISS
(PMID:27292636) GO_REF:0000024
RGD UniProt
PMID:27292636
GO_REF:0000024
NCBI chr 1:182,524,355...182,536,638
Ensembl chr 1:182,515,327...182,536,633
G
Ldlrad4
low density lipoprotein receptor class A domain containing 4
involved_in
ISO
(PMID:24627487)
RGD
PMID:24627487
NCBI chr18:61,519,253...61,848,403
Ensembl chr18:61,521,428...61,843,238
G
Mad2l2
mitotic arrest deficient 2 like 2
involved_in
ISO
(PMID:19443654)
RGD
PMID:19443654
NCBI chr 5:158,563,545...158,576,698
Ensembl chr 5:158,563,567...158,576,693
G
Mark1
microtubule affinity regulating kinase 1
involved_in
ISO IEA
(PMID:31281935) GO_REF:0000107
RGD Ensembl
PMID:31281935
GO_REF:0000107
NCBI chr13:96,450,189...96,555,304
Ensembl chr13:96,451,487...96,555,173
G
Mir130a
microRNA 130a
acts_upstream_of
ISO
UniProtKB:Q13485 (PMID:30741461)
RGD
PMID:30741461
NCBI chr 3:69,822,542...69,822,629
Ensembl chr 3:69,822,542...69,822,629
G
Mir142
microRNA 142
involved_in
ISO
UniProtKB:P01137 (PMID:26572508)
RGD
PMID:26572508
NCBI chr10:72,557,864...72,557,950
Ensembl chr10:72,557,857...72,557,967
G
Mir144
microRNA 144
acts_upstream_of
ISO
(PMID:27785072)
RGD
PMID:27785072
NCBI chr10:62,961,348...62,961,430
Ensembl chr10:62,961,348...62,961,430
G
Mir145
microRNA 145
acts_upstream_of
ISO
(PMID:24384875)
RGD
PMID:24384875
NCBI chr18:55,099,640...55,099,727
Ensembl chr18:55,099,640...55,099,727
G
Mir18a
microRNA 18a
involved_in
ISO
(PMID:28131417)
RGD
PMID:28131417
NCBI chr15:92,180,765...92,180,860
Ensembl chr15:92,180,765...92,180,860
G
Mir202
microRNA 202
acts_upstream_of
ISO
UniProtKB:P01137 (PMID:28373289)
RGD
PMID:28373289
NCBI chr 1:194,754,730...194,754,801
Ensembl chr 1:194,754,730...194,754,801
G
Mir204
microRNA 204
involved_in
ISO
UniProtKB:Q13485 (PMID:23221074)
RGD
PMID:23221074
NCBI chr 1:220,316,931...220,317,040
Ensembl chr 1:220,316,931...220,317,040
G
Mir295-1
microRNA 295-1
involved_in
ISO
UniProtKB:P01137 (PMID:21490602)
RGD
PMID:21490602
NCBI chr 1:65,962,566...65,962,646
Ensembl chr 1:65,962,566...65,962,646
G
Mir29b1
microRNA 29b-1
involved_in
ISO
(PMID:25032858)
RGD
PMID:25032858
NCBI chr 4:59,650,987...59,651,067
Ensembl chr 4:59,650,986...59,651,067
G
Mir29b2
microRNA 29b-2
involved_in
ISO
(PMID:25032858)
RGD
PMID:25032858
NCBI chr13:106,570,371...106,570,451
Ensembl chr13:106,570,367...106,570,456
G
Mir31
microRNA 31
IMP
RGD
PMID:23270756
RGD:13210526
NCBI chr 5:103,599,038...103,599,143
G
Nkx2-1
NK2 homeobox 1
involved_in
ISO IEA
(PMID:19293183) GO_REF:0000107
RGD Ensembl
PMID:19293183
GO_REF:0000107
NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
G
Ovol2
ovo-like zinc finger 2
involved_in
ISO
(MGI:5574425|PMID:24735879), (MGI:6284898|PMID:28455959)
RGD
PMID:24735879 PMID:28455959
MGI:5574425 MGI:6284898
NCBI chr 3:131,677,391...131,707,123
Ensembl chr 3:131,677,391...131,708,359
G
Ppp2ca
protein phosphatase 2 catalytic subunit alpha
involved_in
ISO
(PMID:20080667)
RGD
PMID:20080667
NCBI chr10:36,358,110...36,377,864
Ensembl chr10:36,358,101...36,377,862
G
Pten
phosphatase and tensin homolog
involved_in
ISO
(PMID:27919618)
RGD
PMID:27919618
NCBI chr 1:230,630,443...230,697,070
Ensembl chr 1:230,630,338...230,696,838
G
Sdhaf2
succinate dehydrogenase complex assembly factor 2
acts_upstream_of_or_within
ISO
(PMID:23983127)
RGD
PMID:23983127
NCBI chr 1:207,139,070...207,167,830
Ensembl chr 1:207,139,112...207,168,616
G
Sfrp1
secreted frizzled-related protein 1
involved_in
ISO IEA
(PMID:19095296) GO_REF:0000107
RGD Ensembl
PMID:19095296
GO_REF:0000107
NCBI chr16:68,575,763...68,614,180
Ensembl chr16:68,575,763...68,614,286
G
Sfrp2
secreted frizzled-related protein 2
involved_in
ISO
(PMID:19095296)
RGD
PMID:19095296
NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063
G
Spred1
sprouty-related, EVH1 domain containing 1
involved_in
ISO
(MGI:6414689|PMID:25576668)
RGD
PMID:25576668
MGI:6414689
NCBI chr 3:103,983,120...104,050,321
Ensembl chr 3:103,983,072...104,049,718
G
Spred2
sprouty-related, EVH1 domain containing 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:6414689|PMID:25576668)
UniProt RGD
PMID:25576668
GO_REF:0000024 MGI:6414689
NCBI chr14:94,149,210...94,250,787
Ensembl chr14:94,148,837...94,249,162
G
Spred3
sprouty-related, EVH1 domain containing 3
involved_in
ISO
(MGI:6414689|PMID:25576668)
RGD
PMID:25576668
MGI:6414689
NCBI chr 1:84,458,779...84,470,425
Ensembl chr 1:84,459,314...84,470,249
G
Spry1
sprouty RTK signaling antagonist 1
involved_in
ISO
(MGI:6414689|PMID:25576668)
RGD
PMID:25576668
MGI:6414689
NCBI chr 2:120,557,256...120,561,917
Ensembl chr 2:120,556,706...120,566,189
G
Spry2
sprouty RTK signaling antagonist 2
involved_in
ISO
(MGI:6414689|PMID:25576668)
RGD
PMID:25576668
MGI:6414689
NCBI chr15:82,692,291...82,697,408
Ensembl chr15:82,692,143...82,698,009
G
Tgfbr3
transforming growth factor beta receptor 3
acts_upstream_of_or_within
ISO
(PMID:17823118)
RGD
PMID:17823118
NCBI chr14:2,489,397...2,665,383
Ensembl chr14:2,489,397...2,663,341
G
Trim62
tripartite motif-containing 62
acts_upstream_of_or_within
ISO
MGI:5538538 (PMID:24890125)
RGD
PMID:24890125
NCBI chr 5:141,230,830...141,260,629
Ensembl chr 5:141,231,523...141,259,915
G
Tsc2
TSC complex subunit 2
IMP
RGD
PMID:20813961
RGD:11568680
NCBI chr10:13,621,135...13,655,773
Ensembl chr10:13,621,136...13,655,951
G
Usf3
upstream transcription factor family member 3
involved_in
ISO IBA
(PMID:28011713) GO_REF:0000033
RGD GO_Central
PMID:28011713
GO_REF:0000033
NCBI chr11:56,470,738...56,529,736
Ensembl chr11:56,476,122...56,529,884
G
Vasn
vasorin
involved_in
ISO
(PMID:21170088)
RGD
PMID:21170088
NCBI chr10:10,917,750...10,928,259
Ensembl chr10:10,917,605...10,928,357
G
Vegfa
vascular endothelial growth factor A
involved_in
ISO
(MGI:5502250|PMID:23863481)
RGD
PMID:23863481
MGI:5502250
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
G
Znf750
zinc finger protein 750
involved_in
ISO
(PMID:32042337)
RGD
PMID:32042337
NCBI chr10:106,772,162...106,781,186
Ensembl chr10:106,772,669...106,781,200
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISO
(MGI:3830400|PMID:19161227)
RGD
PMID:19161227
MGI:3830400
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
G
Hoxa5
homeo box A5
involved_in
ISO IEA
(PMID:10397719) GO_REF:0000107
RGD Ensembl
PMID:10397719
GO_REF:0000107
NCBI chr 4:81,302,341...81,306,234
Ensembl chr 4:81,302,353...81,306,234
G
Hspa9
heat shock protein family A (Hsp70) member 9
involved_in
IEA ISS ISO
GO_REF:0000107 GO_REF:0000024 (PMID:21123823)
Ensembl UniProt RGD
PMID:21123823
GO_REF:0000024 GO_REF:0000107
NCBI chr18:26,536,131...26,554,294
Ensembl chr18:26,535,798...26,554,292
G
Klf13
KLF transcription factor 13
involved_in
ISO
(MGI:3796470|PMID:18285334)
RGD
PMID:18285334
MGI:3796470
NCBI chr 1:117,505,857...117,536,626
Ensembl chr 1:117,503,602...117,551,227
G
Ldb1
LIM domain binding 1
involved_in
ISO
(MGI:3700453|PMID:9391090)
RGD
PMID:9391090
MGI:3700453
NCBI chr 1:244,864,168...244,890,007
Ensembl chr 1:244,877,173...244,890,013
G
Lmo2
LIM domain only 2
involved_in
ISO
(MGI:3700453|PMID:9391090)
RGD
PMID:9391090
MGI:3700453
NCBI chr 3:90,355,234...90,377,970
Ensembl chr 3:90,365,883...90,377,953
G
LOC103692127
homeobox protein Hox-A5
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
G
Mafb
MAF bZIP transcription factor B
involved_in
ISO
(PMID:8620536)
RGD
PMID:8620536
NCBI chr 3:148,998,111...149,000,031
Ensembl chr 3:148,998,122...149,000,031
G
Stat5a
signal transducer and activator of transcription 5A
acts_upstream_of_or_within
ISO
MGI:103035 (PMID:10072077)
RGD
PMID:10072077
NCBI chr10:85,785,537...85,809,869
Ensembl chr10:85,785,537...85,809,866
G
Stat5b
signal transducer and activator of transcription 5B
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:103036 (PMID:10072077)
Ensembl RGD
PMID:10072077
GO_REF:0000107
NCBI chr10:85,704,841...85,775,856
Ensembl chr10:85,705,670...85,775,668
G
Ypel4
yippee-like 4
acts_upstream_of_or_within
ISO
MGI:4456736 (PMID:34354145)
RGD
PMID:34354145
NCBI chr 3:69,815,373...69,820,708
Ensembl chr 3:69,816,175...69,820,707
G
Zfp36
zinc finger protein 36
involved_in
ISS ISO
GO_REF:0000024 (PMID:20702587)
UniProt RGD
PMID:20702587
GO_REF:0000024
NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564
G
Zfp36l1
zinc finger protein 36, C3H type-like 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:20702587)
UniProt RGD
PMID:20702587
GO_REF:0000024
NCBI chr 6:98,930,705...98,935,748
Ensembl chr 6:98,930,718...98,935,748
G
Trpv1
transient receptor potential cation channel, subfamily V, member 1
IMP
RGD
PMID:16056236
RGD:2317116
NCBI chr10:57,851,428...57,876,513
Ensembl chr10:57,851,428...57,876,513
G
Ttpa
alpha tocopherol transfer protein
involved_in
ISO IEA
(MGI:4461120|PMID:19923370) GO_REF:0000107
RGD Ensembl
PMID:19923370
GO_REF:0000107 MGI:4461120
NCBI chr 5:33,497,537...33,518,936
Ensembl chr 5:33,497,137...33,518,073
G
S1pr3
sphingosine-1-phosphate receptor 3
involved_in
ISO
(PMID:24851274)
RGD
PMID:24851274
NCBI chr17:13,781,050...13,794,408
Ensembl chr17:13,781,050...13,794,505
G
Vegfa
vascular endothelial growth factor A
involved_in
ISO IEA
(PMID:20048167) GO_REF:0000107
RGD Ensembl
PMID:20048167
GO_REF:0000107
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
G
Il1a
interleukin 1 alpha
IDA
RGD
PMID:18057314
RGD:10046056
NCBI chr 3:116,526,601...116,537,055
Ensembl chr 3:116,526,604...116,536,822
G
Adipoq
adiponectin, C1Q and collagen domain containing
involved_in
ISO ISS
(PMID:12021245) GO_REF:0000024 (MGI:3813436|PMID:12021245)
RGD UniProt
PMID:12021245
GO_REF:0000024 MGI:3813436
NCBI chr11:77,721,912...77,735,644
Ensembl chr11:77,721,912...77,735,564
G
Ankrd26
ankyrin repeat domain containing 26
involved_in acts_upstream_of_or_within
ISO
(MGI:5908330|PMID:22666460) MGI:3774418 (PMID:21669876)
RGD
PMID:21669876 PMID:22666460
MGI:5908330
NCBI chr 4:151,670,604...151,740,032
Ensembl chr 4:151,672,037...151,739,968
G
Asxl1
ASXL transcriptional regulator 1
involved_in
ISO
(MGI:5318011|PMID:21047783)
RGD
PMID:21047783
MGI:5318011
NCBI chr 3:141,814,012...141,881,526
Ensembl chr 3:141,813,433...141,881,538
G
Axin1
axin 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:10937998)
Ensembl RGD
PMID:10937998
GO_REF:0000107
NCBI chr10:15,163,477...15,215,615
Ensembl chr10:15,163,684...15,215,615
G
Bbs12
Bardet-Biedl syndrome 12
acts_upstream_of_or_within
ISO
(PMID:22958920) MGI:5444297 (PMID:22958920)
RGD
PMID:22958920
NCBI chr 2:120,203,396...120,221,024
Ensembl chr 2:120,203,428...120,219,255
G
Bmal1
basic helix-loop-helix ARNT like 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:5437152|PMID:22611086)
UniProt RGD
PMID:22611086
GO_REF:0000024 MGI:5437152
NCBI chr 1:167,331,756...167,430,235
Ensembl chr 1:167,331,633...167,430,231
G
Bmp2
bone morphogenetic protein 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:23399447)
Ensembl RGD
PMID:23399447
GO_REF:0000107
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
G
C1ql4
complement C1q like 4
acts_upstream_of_or_within
ISO
(PMID:23449976)
RGD
PMID:23449976
NCBI chr 7:130,243,606...130,246,678
Ensembl chr 7:130,243,606...130,246,678
G
Ccdc85b
coiled-coil domain containing 85B
involved_in
ISO
(MGI:3576954|PMID:15644333), (MGI:5908330|PMID:22666460)
RGD
PMID:15644333 PMID:22666460
MGI:3576954 MGI:5908330
NCBI chr 1:202,763,645...202,764,660
Ensembl chr 1:202,763,631...202,764,703
G
Ccn4
cellular communication network factor 4
involved_in
IEA ISO
GO_REF:0000107 (MGI:6294174|PMID:28496206)
Ensembl RGD
PMID:28496206
GO_REF:0000107 MGI:6294174
NCBI chr 7:98,645,238...98,677,253
Ensembl chr 7:98,645,182...98,677,248
G
Ddit3
DNA-damage inducible transcript 3
acts_upstream_of_or_within
ISO
MGI:1098272 (PMID:22441668)
RGD
PMID:22441668
NCBI chr 7:63,115,645...63,121,203
Ensembl chr 7:63,116,380...63,121,201
G
Dlk1
delta like non-canonical Notch ligand 1
involved_in
ISO
(MGI:69412|PMID:8500166)
RGD
PMID:8500166
MGI:69412
NCBI chr 6:128,410,216...128,417,518
Ensembl chr 6:128,410,316...128,417,522
G
E2f1
E2F transcription factor 1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:2152476|PMID:11672531)
UniProt Ensembl RGD
PMID:11672531
GO_REF:0000024 GO_REF:0000107 MGI:2152476
NCBI chr 3:143,064,535...143,075,362
Ensembl chr 3:143,049,478...143,075,361
G
Enpp1
ectonucleotide pyrophosphatase/phosphodiesterase 1
involved_in
ISO IBA IEA
(PMID:17849011) GO_REF:0000033 GO_REF:0000118 (MGI:3777520|PMID:17849011)
RGD GO_Central TreeGrafter
PMID:17849011
GO_REF:0000033 GO_REF:0000118 MGI:3777520
NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
G
Fermt2
FERM domain containing kindlin 2
involved_in
ISO
(PMID:29496737) (MGI:6149626|PMID:29496737)
RGD
PMID:29496737
MGI:6149626
NCBI chr15:18,682,927...18,751,959
Ensembl chr15:18,682,927...18,751,811
G
Foxo1
forkhead box O1
involved_in
ISO ISS
(PMID:18293098) (MGI:3770474|PMID:17681146) GO_REF:0000024
RGD UniProt
PMID:17681146 PMID:18293098
GO_REF:0000024 MGI:3770474
NCBI chr 2:136,312,168...136,390,603
Ensembl chr 2:136,312,168...136,387,790
G
Gper1
G protein-coupled estrogen receptor 1
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:5516154|PMID:23871778) GO_REF:0000024
Ensembl RGD UniProt
PMID:23871778
GO_REF:0000024 GO_REF:0000107 MGI:5516154
NCBI chr12:15,217,217...15,222,679
Ensembl chr12:15,217,442...15,221,889
G
Gps2
G protein pathway suppressor 2
involved_in
ISO
(MGI:5908330|PMID:22666460)
RGD
PMID:22666460
MGI:5908330
NCBI chr10:54,637,360...54,640,542
Ensembl chr10:54,637,455...54,640,650
G
Id4
inhibitor of DNA binding 4
acts_upstream_of_or_within
ISO
(PMID:20628571)
RGD
PMID:20628571
NCBI chr17:16,389,387...16,391,956
Ensembl chr17:16,389,387...16,392,470
G
Insig1
insulin induced gene 1
acts_upstream_of_or_within
ISO
(PMID:12869692)
RGD
PMID:12869692
NCBI chr 4:7,315,494...7,323,972
Ensembl chr 4:7,315,495...7,323,952
G
Jag1
jagged canonical Notch ligand 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:15060169)
Ensembl RGD
PMID:15060169
GO_REF:0000107
NCBI chr 3:124,406,783...124,442,220
Ensembl chr 3:124,406,794...124,442,209
G
Jdp2
Jun dimerization protein 2
acts_upstream_of_or_within
ISO
(PMID:17464331)
RGD
PMID:17464331
NCBI chr 6:105,261,619...105,302,386
Ensembl chr 6:105,261,373...105,301,485
G
Lrp3
LDL receptor related protein 3
involved_in
ISO IEA
(PMID:28340487) GO_REF:0000107
RGD Ensembl
PMID:28340487
GO_REF:0000107
NCBI chr 1:87,843,815...87,859,147
Ensembl chr 1:87,844,868...87,859,110
G
Lrp6
LDL receptor related protein 6
acts_upstream_of_or_within
ISO
MGI:2156191 (PMID:17888405)
RGD
PMID:17888405
NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497
G
Mir138-1
microRNA 138-1
involved_in
ISO
(PMID:31769250)
RGD
PMID:31769250
NCBI chr 8:122,300,966...122,301,064
Ensembl chr 8:122,300,966...122,301,064
G
Mir138-2
microRNA 138-2
involved_in
ISO
(PMID:31769250)
RGD
PMID:31769250
NCBI chr19:10,674,193...10,674,274
Ensembl chr19:10,674,193...10,674,274
G
Mir143
microRNA 143
IMP
RGD
PMID:24448661
RGD:155883165
NCBI chr18:55,101,006...55,101,110
Ensembl chr18:55,101,006...55,101,110
G
Mir27b
microRNA 27b
involved_in acts_upstream_of
ISO
(PMID:29794473) (PMID:19800867)
RGD
PMID:19800867 PMID:29794473
NCBI chr17:1,813,427...1,813,523
Ensembl chr17:1,813,426...1,813,529
G
Mir448
microRNA 448
acts_upstream_of_or_within
ISO
(PMID:20719859)
RGD
PMID:20719859
NCBI chr X:110,829,918...110,830,029
Ensembl chr X:110,829,918...110,830,029
G
Mkx
mohawk homeobox
IMP
RGD
PMID:27370800
RGD:40924660
NCBI chr17:55,077,073...55,156,877
Ensembl chr17:55,077,540...55,156,124
G
Mmp11
matrix metallopeptidase 11
acts_upstream_of_or_within
ISO
(PMID:18622425)
RGD
PMID:18622425
NCBI chr20:12,730,846...12,739,629
Ensembl chr20:12,730,836...12,739,628
G
Msx2
msh homeobox 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:15175325)
Ensembl RGD
PMID:15175325
GO_REF:0000107
NCBI chr17:11,097,214...11,102,879
Ensembl chr17:11,097,103...11,102,879
G
Ncor2
nuclear receptor co-repressor 2
acts_upstream_of_or_within
ISO
MGI:3829987 (PMID:19066220)
RGD
PMID:19066220
NCBI chr12:31,466,418...31,628,319
Ensembl chr12:31,466,412...31,628,319
G
Nucb2
nucleobindin 2
IDA
RGD
PMID:22486620
RGD:9831186
NCBI chr 1:170,750,830...170,787,356
Ensembl chr 1:170,750,877...170,787,353
G
Ptgr3
prostaglandin reductase 3
involved_in
ISO
(MGI:5509250|PMID:23821743)
RGD
PMID:23821743
MGI:5509250
NCBI chr18:77,454,435...77,463,785
Ensembl chr18:77,454,435...77,463,785
G
Rora
RAR-related orphan receptor A
involved_in
ISO
(MGI:3846256|PMID:19324970)
RGD
PMID:19324970
MGI:3846256
NCBI chr 8:69,301,635...70,034,741
Ensembl chr 8:69,301,733...70,025,931
G
Runx1t1
RUNX1 partner transcriptional co-repressor 1
involved_in
ISO
(MGI:5751611|PMID:26774823)
RGD
PMID:26774823
MGI:5751611
NCBI chr 5:27,187,674...27,338,070
Ensembl chr 5:27,187,551...27,335,592
G
Sirt1
sirtuin 1
involved_in
ISO IEA
(MGI:3045940|PMID:15175761) GO_REF:0000107
RGD Ensembl
PMID:15175761
GO_REF:0000107 MGI:3045940
NCBI chr20:25,307,225...25,329,273
Ensembl chr20:25,306,917...25,329,260
G
Sirt2
sirtuin 2
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:3770474|PMID:17681146), (MGI:5567909|PMID:19037106)
UniProt Ensembl RGD
PMID:17681146 PMID:19037106
GO_REF:0000024 GO_REF:0000107 MGI:3770474 MGI:5567909
NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975
G
Smad3
SMAD family member 3
involved_in
ISO
(PMID:19816956)
RGD
PMID:19816956
NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960
G
Sod2
superoxide dismutase 2
acts_upstream_of_or_within
ISO
(PMID:16219542)
RGD
PMID:16219542
NCBI chr 1:47,638,318...47,645,163
Ensembl chr 1:47,636,528...47,645,189
G
Sort1
sortilin 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:24928897)
Ensembl RGD
PMID:24928897
GO_REF:0000107
NCBI chr 2:195,924,033...196,002,354
Ensembl chr 2:195,924,099...196,002,354
G
Tcf7l2
transcription factor 7 like 2
acts_upstream_of_or_within
ISO
(PMID:10937998)
RGD
PMID:10937998
NCBI chr 1:254,785,956...254,978,967
Ensembl chr 1:254,786,091...254,978,967
G
Tgfb1
transforming growth factor, beta 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:15040835)
UniProt RGD
PMID:15040835
GO_REF:0000024
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
G
Tgfb1i1
transforming growth factor beta 1 induced transcript 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:97747 (PMID:15687259)
Ensembl RGD
PMID:15687259
GO_REF:0000107
NCBI chr 1:182,828,553...182,835,465
Ensembl chr 1:182,828,544...182,837,080
G
Tlcd3b
TLC domain containing 3B
acts_upstream_of_or_within
ISO
(PMID:23275342)
RGD
PMID:23275342
NCBI chr 1:181,421,104...181,439,744
Ensembl chr 1:181,422,830...181,439,743
G
Tnf
tumor necrosis factor
IDA
RGD
PMID:10757205
RGD:13825251
NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
G
Trib2
tribbles pseudokinase 2
involved_in
ISO
(MGI:3722453|PMID:17576771)
RGD
PMID:17576771
MGI:3722453
NCBI chr 6:38,545,971...38,570,349
Ensembl chr 6:38,545,975...38,569,370
G
Trib3
tribbles pseudokinase 3
involved_in
ISO
(MGI:3722453|PMID:17576771)
RGD
PMID:17576771
MGI:3722453
NCBI chr 3:140,809,634...140,815,230
Ensembl chr 3:140,809,043...140,814,497
G
Trio
trio Rho guanine nucleotide exchange factor
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:5908330|PMID:22666460)
UniProt Ensembl RGD
PMID:22666460
GO_REF:0000024 GO_REF:0000107 MGI:5908330
NCBI chr 2:78,505,069...78,801,384
Ensembl chr 2:78,505,070...78,803,135
G
Vegfa
vascular endothelial growth factor A
acts_upstream_of_or_within
ISO
MGI:1931048 (PMID:22886301)
RGD
PMID:22886301
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
G
Wnt1
Wnt family member 1
involved_in acts_upstream_of_or_within
ISO
(MGI:3758508|PMID:10937998) (PMID:10937998), (PMID:15728361)
RGD
PMID:10937998 PMID:15728361
MGI:3758508
NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651
G
Wnt10b
Wnt family member 10B
involved_in acts_upstream_of_or_within
ISO
(PMID:10937998) (PMID:10937998), (PMID:12055200), (PMID:15728361)
RGD
PMID:10937998 PMID:12055200 PMID:15728361
NCBI chr 7:129,922,088...129,927,892
Ensembl chr 7:129,922,088...129,927,892
G
Wnt3a
Wnt family member 3A
acts_upstream_of_or_within
ISO
MGI:103573|MGI:88373 (PMID:15796911), (PMID:17888405)
RGD
PMID:15796911 PMID:17888405
NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324
G
Wnt5a
Wnt family member 5A
involved_in
ISO IEA
(PMID:20032469) GO_REF:0000107
RGD Ensembl
PMID:20032469
GO_REF:0000107
NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
G
Wwtr1
WW domain containing transcription regulator 1
involved_in acts_upstream_of_or_within
ISO
UniProtKB:Q96AC1 (PMID:29496737) MGI:97747 (PMID:16099986)
RGD
PMID:16099986 PMID:29496737
NCBI chr 2:141,651,159...141,766,919
Ensembl chr 2:141,648,108...141,766,968
G
Yap1
Yes1 associated transcriptional regulator
involved_in
ISO IEA
(PMID:29496737) GO_REF:0000107
RGD Ensembl
PMID:29496737
GO_REF:0000107
NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010
G
Zfp36l2
zinc finger protein 36, C3H type-like 2
involved_in
ISO
(MGI:5784976|PMID:22701344)
RGD
PMID:22701344
MGI:5784976
NCBI chr 6:10,490,032...10,494,073
Ensembl chr 6:10,490,032...10,494,064
G
Zfpm2
zinc finger protein, multitype 2
involved_in
ISO
(MGI:5009348|PMID:20705609)
RGD
PMID:20705609
MGI:5009348
NCBI chr 7:71,678,658...72,116,209
Ensembl chr 7:71,678,880...72,116,205
G
B2m
beta-2 microglobulin
involved_in
ISO IEA
(PMID:26147761) GO_REF:0000107 (MGI:5708430|PMID:26147761)
RGD Ensembl
PMID:26147761
GO_REF:0000107 MGI:5708430
NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766
G
Hes1
hes family bHLH transcription factor 1
involved_in
IDA
PMID:11399758
UniProt
PMID:11399758
RGD:8554692
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
G
Hes5
hes family bHLH transcription factor 5
involved_in
IDA
PMID:11399758
UniProt
PMID:11399758
RGD:8554692
NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001
G
Ptger3
prostaglandin E receptor 3
IMP
RGD
PMID:19555672
RGD:10043320
NCBI chr 2:246,606,131...246,750,970
Ensembl chr 2:246,606,183...246,684,434
G
Casz1
castor zinc finger 1
acts_upstream_of_or_within
ISO
MGI:3052661|MGI:4841554 (PMID:25654255)
RGD
PMID:25654255
NCBI chr 5:159,243,965...159,393,935
Ensembl chr 5:159,243,995...159,393,400
G
Lin28a
lin-28 homolog A
acts_upstream_of_or_within
ISO
(PMID:20179095)
RGD
PMID:20179095
NCBI chr 5:146,227,119...146,244,122
Ensembl chr 5:146,227,119...146,244,122
G
Abcc8
ATP binding cassette subfamily C member 8
IMP
RGD
PMID:23149556
RGD:12790979
NCBI chr 1:96,598,568...96,679,563
Ensembl chr 1:96,598,647...96,679,510
G
Adcyap1
adenylate cyclase activating polypeptide 1
IDA
RGD
PMID:15870074
RGD:2325307
NCBI chr 9:113,102,632...113,122,500
Ensembl chr 9:113,103,718...113,109,773
G
Cdkn2b
cyclin-dependent kinase inhibitor 2B
IMP
RGD
PMID:26526028
RGD:11252201
NCBI chr 5:104,009,839...104,019,082
Ensembl chr 5:104,010,680...104,019,050
G
Cysltr2
cysteinyl leukotriene receptor 2
IMP
RGD
PMID:17910051
RGD:5144007
NCBI chr15:48,189,476...48,228,750
Ensembl chr15:48,189,073...48,304,136
G
Dicer1
dicer 1 ribonuclease III
acts_upstream_of_or_within
ISO
GO:0060253 (PMID:20805985)
RGD
PMID:20805985
NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
G
Hes1
hes family bHLH transcription factor 1
involved_in
IEA ISS ISO
GO_REF:0000107 GO_REF:0000024 (MGI:2655020|PMID:12666205)
Ensembl UniProt RGD
PMID:12666205
GO_REF:0000024 GO_REF:0000107 MGI:2655020
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
G
Idh2
isocitrate dehydrogenase (NADP(+)) 2
IMP
RGD
PMID:21641335
RGD:11522736
NCBI chr 1:134,038,644...134,057,969
Ensembl chr 1:134,029,772...134,058,025
G
Mfn2
mitofusin 2
IMP
RGD
PMID:25017825
RGD:13204822
NCBI chr 5:158,304,285...158,335,502
Ensembl chr 5:158,304,287...158,335,342
G
Mir146a
microRNA 146a
involved_in
ISO
(PMID:29384235)
RGD
PMID:29384235
NCBI chr10:27,848,516...27,848,610
Ensembl chr10:27,848,516...27,848,610
G
Nf1
neurofibromin 1
acts_upstream_of_or_within
ISO
MGI:1857444|MGI:1857478|MGI:96680|MGI:97874|MGI:98834 (PMID:10442636), (PMID:10973261), (PMID:11246230), (PMID:15665300)
RGD
PMID:10442636 PMID:10973261 PMID:11246230 PMID:15665300
NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658
G
Notch1
notch receptor 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:2655020|PMID:12666205)
UniProt RGD
PMID:12666205
GO_REF:0000024 MGI:2655020
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Ptn
pleiotrophin
IMP
RGD
PMID:17881084
RGD:2292001
NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456
G
Rb1
RB transcriptional corepressor 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:97306 (PMID:11246230)
Ensembl RGD
PMID:11246230
GO_REF:0000107
NCBI chr15:48,371,295...48,502,473
Ensembl chr15:48,371,296...48,502,302
G
Sox11
SRY-box transcription factor 11
involved_in
ISS ISO
GO_REF:0000024 (MGI:5285167|PMID:19808959) (PMID:19808959)
UniProt RGD
PMID:19808959
GO_REF:0000024 MGI:5285167
NCBI chr 6:44,008,333...44,010,354
Ensembl chr 6:44,008,340...44,010,354
G
Tert
telomerase reverse transcriptase
IDA
RGD
PMID:21940960
RGD:11038672
NCBI chr 1:29,637,213...29,659,561
Ensembl chr 1:29,637,506...29,659,561
G
Tp53
tumor protein p53
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:97306 (PMID:10973261), (PMID:11246230)
Ensembl RGD
PMID:10973261 PMID:11246230
GO_REF:0000107
NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
G
Tspo
translocator protein
IDA
RGD
PMID:14678758
RGD:2317158
NCBI chr 7:114,720,188...114,730,450
Ensembl chr 7:114,720,188...114,730,450
G
Atoh1
atonal bHLH transcription factor 1
involved_in
ISO
UniProtKB:Q10574 (MGI:6796503|PMID:32665354)
RGD
PMID:32665354
MGI:6796503
NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154
G
Pitx3
paired-like homeodomain 3
IDA
RGD
PMID:18385323
RGD:11535083
NCBI chr 1:245,001,106...245,013,881
Ensembl chr 1:245,001,164...245,013,892
G
Lbx1
ladybird homeobox 1
acts_upstream_of_or_within
ISO
MGI:2182635 (PMID:16234809)
RGD
PMID:16234809
NCBI chr 1:244,083,873...244,085,690
Ensembl chr 1:244,083,873...244,085,690
G
Adipoq
adiponectin, C1Q and collagen domain containing
involved_in
ISO ISS
(PMID:10961870) GO_REF:0000024
RGD UniProt
PMID:10961870
GO_REF:0000024
NCBI chr11:77,721,912...77,735,644
Ensembl chr11:77,721,912...77,735,564
G
C1qc
complement C1q C chain
involved_in
ISO IEA
(PMID:10961870) GO_REF:0000107
RGD Ensembl
PMID:10961870
GO_REF:0000107
NCBI chr 5:149,127,412...149,130,757
Ensembl chr 5:149,127,415...149,131,017
G
Ceacam1
CEA cell adhesion molecule 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:4837548|PMID:21029969)
UniProt RGD
PMID:21029969
GO_REF:0000024 MGI:4837548
NCBI chr 1:81,043,595...81,060,050
Ensembl chr 1:81,043,595...81,059,992
G
Cul4a
cullin 4A
acts_upstream_of_or_within
ISO
(PMID:12393421)
RGD
PMID:12393421
NCBI chr16:76,385,298...76,422,316
Ensembl chr16:76,384,546...76,422,330
G
Inpp5d
inositol polyphosphate-5-phosphatase D
acts_upstream_of_or_within
ISO
MGI:2386884 (PMID:9620849)
RGD
PMID:9620849
NCBI chr 9:88,287,680...88,392,748
Ensembl chr 9:88,287,677...88,392,746
G
Prdm16
PR/SET domain 16
involved_in
ISO
(PMID:12816872)
RGD
PMID:12816872
NCBI chr 5:164,879,864...165,203,986
Ensembl chr 5:164,880,587...165,203,601
G
Rara
retinoic acid receptor, alpha
involved_in
ISO
(PMID:19917671)
RGD
PMID:19917671
NCBI chr10:83,883,490...83,928,932
Ensembl chr10:83,893,384...83,928,142
G
Runx1
RUNX family transcription factor 1
involved_in
ISO
(PMID:9199349)
RGD
PMID:9199349
NCBI chr11:31,839,880...32,074,427
Ensembl chr11:31,843,764...32,074,542
G
Zbtb46
zinc finger and BTB domain containing 46
acts_upstream_of_or_within
ISO
MGI:5320483 (PMID:22615127)
RGD
PMID:22615127
NCBI chr 3:168,497,294...168,567,799
Ensembl chr 3:168,499,583...168,568,782
G
Gata2
GATA binding protein 2
acts_upstream_of_or_within
ISO
(PMID:16621992)
RGD
PMID:16621992
NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
G
Mettl14
methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit
involved_in acts_upstream_of
ISO
(MGI:6278085|PMID:29290617) (PMID:29290617)
RGD
PMID:29290617
MGI:6278085
NCBI chr 2:211,530,598...211,546,845
Ensembl chr 2:211,530,602...211,546,821
G
Mixl1
Mix paired-like homeobox 1
involved_in
ISO
(MGI:5447921|PMID:19038793)
RGD
PMID:19038793
MGI:5447921
NCBI chr13:92,422,031...92,426,065
Ensembl chr13:92,422,031...92,426,065
G
Myb
MYB proto-oncogene, transcription factor
involved_in
ISO
(PMID:28111278)
RGD
PMID:28111278
NCBI chr 1:15,939,771...15,973,367
Ensembl chr 1:15,939,761...15,973,057
G
Hspa9
heat shock protein family A (Hsp70) member 9
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:5784980|PMID:21123823) GO_REF:0000107
UniProt RGD Ensembl
PMID:21123823
GO_REF:0000024 GO_REF:0000107 MGI:5784980
NCBI chr18:26,536,131...26,554,294
Ensembl chr18:26,535,798...26,554,292
G
N4bp2l2
NEDD4 binding protein 2-like 2
involved_in
ISO
(PMID:19506020)
RGD
PMID:19506020
NCBI chr12:137,342...200,292
Ensembl chr12:103,590...197,784
G
Nfe2l2
NFE2 like bZIP transcription factor 2
involved_in
ISO
(MGI:5476857|PMID:23434824)
RGD
PMID:23434824
MGI:5476857
NCBI chr 3:60,594,239...60,621,712
Ensembl chr 3:60,594,242...60,621,737
G
Tcf15
transcription factor 15
involved_in
ISO
(MGI:6479302|PMID:32669716)
RGD
PMID:32669716
MGI:6479302
NCBI chr 3:140,638,984...140,644,766
Ensembl chr 3:140,638,984...140,644,766
G
Tmsb4x
thymosin beta 4, X-linked
involved_in
ISO
(PMID:7694679)
RGD
PMID:7694679
NCBI chr X:27,144,666...27,146,667
Ensembl chr X:27,128,610...27,146,667
G
Zfp36
zinc finger protein 36
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2652418 (PMID:11588035)
Ensembl RGD
PMID:11588035
GO_REF:0000107
NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564
G
Cebpa
CCAAT/enhancer binding protein alpha
acts_upstream_of_or_within
ISO
MGI:2177135 (PMID:15073037)
RGD
PMID:15073037
NCBI chr 1:87,759,631...87,762,303
Ensembl chr 1:87,759,433...87,762,412
G
Irgm
immunity-related GTPase M
involved_in
ISS ISO
GO_REF:0000024 (MGI:5293213|PMID:21633090)
UniProt RGD
PMID:21633090
GO_REF:0000024 MGI:5293213
NCBI chr10:33,233,513...33,241,594
Ensembl chr10:33,233,455...33,241,578
G
Mir221
microRNA 221
involved_in
ISO
(PMID:16330772)
RGD
PMID:16330772
NCBI chr X:3,429,465...3,429,573
Ensembl chr X:3,429,465...3,429,573
G
Mir222
microRNA 222
involved_in
ISO
(PMID:16330772)
RGD
PMID:16330772
NCBI chr X:3,428,904...3,429,006
Ensembl chr X:3,428,904...3,429,006
G
Snai2
snail family transcriptional repressor 2
acts_upstream_of_or_within
ISO
MGI:2447174 (PMID:20032500)
RGD
PMID:20032500
NCBI chr11:86,182,788...86,186,203
Ensembl chr11:86,181,909...86,186,200
G
Tsc22d1
TSC22 domain family, member 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:3847064|PMID:19329776)
UniProt RGD
PMID:19329776
GO_REF:0000024 MGI:3847064
NCBI chr15:51,750,489...51,850,958
Ensembl chr15:51,749,510...51,850,958
G
Hspa9
heat shock protein family A (Hsp70) member 9
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:5784980|PMID:21123823) GO_REF:0000107
UniProt RGD Ensembl
PMID:21123823
GO_REF:0000024 GO_REF:0000107 MGI:5784980
NCBI chr18:26,536,131...26,554,294
Ensembl chr18:26,535,798...26,554,292
G
Il17d
interleukin 17D
involved_in
ISO
(PMID:12097364)
RGD
PMID:12097364
NCBI chr15:31,671,337...31,688,833
G
Frzb
frizzled-related protein
acts_upstream_of_or_within
ISO
(PMID:19562671)
RGD
PMID:19562671
NCBI chr 3:65,332,274...65,365,208
Ensembl chr 3:65,332,277...65,365,208
G
Bmp4
bone morphogenetic protein 4
involved_in
IEA ISS ISO
GO_REF:0000107 GO_REF:0000024 (PMID:12421925)
Ensembl UniProt RGD
PMID:12421925
GO_REF:0000024 GO_REF:0000107
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Cdkn2a
cyclin-dependent kinase inhibitor 2A
involved_in
ISO
(MGI:3615850|PMID:15964995)
RGD
PMID:15964995
MGI:3615850
NCBI chr 5:103,984,949...103,992,143
Ensembl chr 5:103,984,949...104,003,149
G
Clec4g
C-type lectin domain family 4, member G
acts_upstream_of_or_within
ISO
MGI:5510586 (PMID:23487419)
RGD
PMID:23487419
NCBI chr12:1,780,370...1,785,027
Ensembl chr12:1,780,371...1,784,985
G
Erbb2
erb-b2 receptor tyrosine kinase 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:16230479)
Ensembl RGD
PMID:16230479
GO_REF:0000107
NCBI chr10:83,411,197...83,435,078
Ensembl chr10:83,411,313...83,435,078
G
Ihh
Indian hedgehog signaling molecule
involved_in
ISO
(MGI:3836494|PMID:19109233)
RGD
PMID:19109233
MGI:3836494
NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532
G
Tmem131l
transmembrane 131 like
involved_in
ISO
(PMID:23690469)
RGD
PMID:23690469
NCBI chr 2:169,257,659...169,391,773
Ensembl chr 2:169,258,289...169,391,711
G
Dll1
delta like canonical Notch ligand 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1932522|MGI:3044907 (PMID:16495313)
Ensembl RGD
PMID:16495313
GO_REF:0000107
NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
G
Fgfr3
fibroblast growth factor receptor 3
acts_upstream_of_or_within
ISO
MGI:1931521 (PMID:17117437)
RGD
PMID:17117437
NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341
G
Hes1
hes family bHLH transcription factor 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:104876|MGI:1341800|MGI:2149672 (PMID:11023859), (PMID:11425898), (PMID:21300049)
Ensembl RGD
PMID:11023859 PMID:11425898 PMID:21300049
GO_REF:0000107
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
G
Hes5
hes family bHLH transcription factor 5
acts_upstream_of_or_within
ISO
MGI:104853|MGI:1341800|MGI:2149674 (PMID:11425898), (PMID:21300049)
RGD
PMID:11425898 PMID:21300049
NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001
G
Notch1
notch receptor 1
acts_upstream_of_or_within
ISO
MGI:3044585 (PMID:25535395)
RGD
PMID:25535395
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Hes1
hes family bHLH transcription factor 1
involved_in
ISO
(MGI:3625195|PMID:12208538)
RGD
PMID:12208538
MGI:3625195
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
G
Hes5
hes family bHLH transcription factor 5
involved_in
ISO
(MGI:3625195|PMID:12208538)
RGD
PMID:12208538
MGI:3625195
NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001
G
Extl3
exostosin-like glycosyltransferase 3
involved_in
ISO
(PMID:22727489)
RGD
PMID:22727489
NCBI chr15:39,294,033...39,384,086
Ensembl chr15:39,293,605...39,338,898
G
Ezh2
enhancer of zeste 2 polycomb repressive complex 2 subunit
acts_upstream_of_or_within
ISO
MGI:2661097 (PMID:19303854)
RGD
PMID:19303854
NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
G
Hoxa7
homeobox A7
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:11435435) GO_REF:0000107
RGD Ensembl
PMID:11435435
GO_REF:0000107
NCBI chr 4:81,315,730...81,317,629
Ensembl chr 4:81,314,625...81,317,659
G
Msx2
msh homeobox 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1926381 (PMID:19769717)
Ensembl RGD
PMID:19769717
GO_REF:0000107
NCBI chr17:11,097,214...11,102,879
Ensembl chr17:11,097,103...11,102,879
G
Ovol2
ovo-like zinc finger 2
involved_in
ISO
(PMID:19700410)
RGD
PMID:19700410
NCBI chr 3:131,677,391...131,707,123
Ensembl chr 3:131,677,391...131,708,359
G
Reg3a
regenerating islet-derived 3 alpha
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:5488867|PMID:22727489) GO_REF:0000107
UniProt RGD Ensembl
PMID:22727489
GO_REF:0000024 GO_REF:0000107 MGI:5488867
NCBI chr 4:110,872,398...110,875,157
Ensembl chr 4:110,872,425...110,875,157
G
Reg3b
regenerating family member 3 beta
involved_in
ISO
(PMID:22727489)
RGD
PMID:22727489
NCBI chr 4:110,861,775...110,865,015
Ensembl chr 4:110,861,775...110,865,015
G
Reg3g
regenerating family member 3 gamma
involved_in
ISS ISO
GO_REF:0000024 (MGI:5488867|PMID:22727489), (PMID:22727489)
UniProt RGD
PMID:22727489
GO_REF:0000024 MGI:5488867
NCBI chr 4:110,922,805...110,927,803
Ensembl chr 4:110,924,168...110,926,723
G
Srsf6
serine and arginine rich splicing factor 6
involved_in
ISS ISO
GO_REF:0000024 (PMID:24440982)
UniProt RGD
PMID:24440982
GO_REF:0000024
NCBI chr 3:151,589,546...151,594,869
Ensembl chr 3:151,589,535...151,594,860
G
Tp63
tumor protein p63
acts_upstream_of_or_within
ISO
MGI:5140823 (PMID:22274697)
RGD
PMID:22274697
NCBI chr11:74,838,858...75,049,764
Ensembl chr11:74,838,859...75,049,398
G
Shh
sonic hedgehog signaling molecule
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:2388350|PMID:12399320) GO_REF:0000107
UniProt RGD Ensembl
PMID:12399320
GO_REF:0000024 GO_REF:0000107 MGI:2388350
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Foxe3
forkhead box E3
involved_in
ISS ISO
PMID:16199865 (MGI:1352262|PMID:10652278), (MGI:1861492|PMID:10890982), (MGI:3603877|PMID:16199865)
RGD
PMID:10652278 PMID:10890982 PMID:16199865 PMID:16199865
MGI:1352262 MGI:1861492 MGI:3603877 , RGD:10047273
NCBI chr 5:128,444,912...128,446,494
Ensembl chr 5:128,445,594...128,446,454
G
Spred1
sprouty-related, EVH1 domain containing 1
involved_in
ISO
(MGI:6414698|PMID:29501879)
RGD
PMID:29501879
MGI:6414698
NCBI chr 3:103,983,120...104,050,321
Ensembl chr 3:103,983,072...104,049,718
G
Spred2
sprouty-related, EVH1 domain containing 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:6414698|PMID:29501879)
UniProt RGD
PMID:29501879
GO_REF:0000024 MGI:6414698
NCBI chr14:94,149,210...94,250,787
Ensembl chr14:94,148,837...94,249,162
G
Spred3
sprouty-related, EVH1 domain containing 3
involved_in
ISO
(MGI:6414698|PMID:29501879)
RGD
PMID:29501879
MGI:6414698
NCBI chr 1:84,458,779...84,470,425
Ensembl chr 1:84,459,314...84,470,249
G
Spry1
sprouty RTK signaling antagonist 1
involved_in
ISO
(MGI:6414698|PMID:29501879)
RGD
PMID:29501879
MGI:6414698
NCBI chr 2:120,557,256...120,561,917
Ensembl chr 2:120,556,706...120,566,189
G
Spry2
sprouty RTK signaling antagonist 2
involved_in
ISO
(MGI:6414698|PMID:29501879)
RGD
PMID:29501879
MGI:6414698
NCBI chr15:82,692,291...82,697,408
Ensembl chr15:82,692,143...82,698,009
G
Foxp1
forkhead box P1
acts_upstream_of_or_within
ISO
MGI:1921373 (PMID:22675208)
RGD
PMID:22675208
NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258
G
Foxp4
forkhead box P4
acts_upstream_of_or_within
ISO
MGI:1914004 (PMID:22675208)
RGD
PMID:22675208
NCBI chr 9:13,058,506...13,115,406
Ensembl chr 9:13,058,476...13,114,879
G
Fbxo7
F-box protein 7
acts_upstream_of_or_within
ISO
MGI:4434927|MGI:95407 (PMID:21652635)
RGD
PMID:21652635
NCBI chr 7:17,809,224...17,837,549
Ensembl chr 7:17,809,231...17,837,530
G
Pcid2
PCI domain containing 2
involved_in
ISO
(MGI:6106288|PMID:29138493)
RGD
PMID:29138493
MGI:6106288
NCBI chr16:76,423,245...76,448,712
Ensembl chr16:76,423,245...76,448,712
G
Abca5
ATP binding cassette subfamily A member 5
involved_in
ISO
(MGI:4454250|PMID:20382126)
RGD
PMID:20382126
MGI:4454250
NCBI chr10:95,240,159...95,309,195
Ensembl chr10:95,240,154...95,308,976
G
Adipoq
adiponectin, C1Q and collagen domain containing
involved_in
ISO ISS
(PMID:11222466) GO_REF:0000024
RGD UniProt
PMID:11222466
GO_REF:0000024
NCBI chr11:77,721,912...77,735,644
Ensembl chr11:77,721,912...77,735,564
G
Crp
C-reactive protein
involved_in
ISO
(PMID:18322245)
RGD
PMID:18322245
NCBI chr13:85,135,384...85,175,178
Ensembl chr13:85,124,977...85,175,178
G
Itgav
integrin subunit alpha V
involved_in
ISO
(PMID:15215180)
RGD
PMID:15215180
NCBI chr 3:68,838,514...68,926,653
Ensembl chr 3:68,838,189...68,926,639
G
Itgb3
integrin subunit beta 3
involved_in
ISO IEA
(PMID:15215180) GO_REF:0000107
RGD Ensembl
PMID:15215180
GO_REF:0000107
NCBI chr10:89,509,917...89,564,679
Ensembl chr10:89,509,989...89,564,679
G
Mir130b
microRNA 130b
involved_in
ISO
(PMID:31512787)
RGD
PMID:31512787
NCBI chr11:83,880,163...83,880,244
Ensembl chr11:83,880,163...83,880,244
G
Nfkbia
NFKB inhibitor alpha
involved_in
ISO
(PMID:16938301)
RGD
PMID:16938301
NCBI chr 6:72,858,713...72,861,941
Ensembl chr 6:72,858,712...72,861,941
G
Ppara
peroxisome proliferator activated receptor alpha
involved_in
ISO
(PMID:19114110)
RGD
PMID:19114110
NCBI chr 7:116,832,405...116,900,878
Ensembl chr 7:116,832,756...116,895,346
G
Pparg
peroxisome proliferator-activated receptor gamma
involved_in
ISO
(PMID:19114110)
RGD
PMID:19114110
NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
G
Adipoq
adiponectin, C1Q and collagen domain containing
involved_in
ISO ISS
(PMID:10961870) GO_REF:0000024
RGD UniProt
PMID:10961870
GO_REF:0000024
NCBI chr11:77,721,912...77,735,644
Ensembl chr11:77,721,912...77,735,564
G
C1qc
complement C1q C chain
involved_in
ISO IEA
(PMID:10961870) GO_REF:0000107
RGD Ensembl
PMID:10961870
GO_REF:0000107
NCBI chr 5:149,127,412...149,130,757
Ensembl chr 5:149,127,415...149,131,017
G
Gata2
GATA binding protein 2
acts_upstream_of_or_within
ISO
(PMID:16254139)
RGD
PMID:16254139
NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
G
Mir486
microRNA 486
involved_in
ISO
(PMID:25857263)
RGD
PMID:25857263
G
Ptpn2
protein tyrosine phosphatase, non-receptor type 2
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:3629372|PMID:16705167)
UniProt Ensembl RGD
PMID:16705167
GO_REF:0000024 GO_REF:0000107 MGI:3629372
NCBI chr18:61,229,012...61,294,662
Ensembl chr18:61,229,014...61,294,627
G
Qki
QKI, KH domain containing RNA binding
involved_in
ISS ISO
GO_REF:0000024 (PMID:22398723)
UniProt RGD
PMID:22398723
GO_REF:0000024
NCBI chr 1:50,387,716...50,501,568
Ensembl chr 1:50,387,698...50,498,831
G
Thoc5
THO complex subunit 5
acts_upstream_of_or_within
ISO
(PMID:10597251)
RGD
PMID:10597251
NCBI chr14:79,758,805...79,792,718
Ensembl chr14:79,758,917...79,792,718
G
Zbtb46
zinc finger and BTB domain containing 46
acts_upstream_of_or_within
ISO
MGI:5320483 (PMID:22615127)
RGD
PMID:22615127
NCBI chr 3:168,497,294...168,567,799
Ensembl chr 3:168,499,583...168,568,782
G
Zfpm1
zinc finger protein, multitype 1
involved_in
ISO
(MGI:3773481|PMID:18063754)
RGD
PMID:18063754
MGI:3773481
NCBI chr19:50,334,352...50,391,029
Ensembl chr19:50,334,682...50,390,591
G
Cib1
calcium and integrin binding 1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:5314162|PMID:22128142)
UniProt Ensembl RGD
PMID:22128142
GO_REF:0000024 GO_REF:0000107 MGI:5314162
NCBI chr 1:134,178,331...134,183,895
Ensembl chr 1:134,178,331...134,213,423
G
Gabpa
GA binding protein transcription factor subunit alpha
acts_upstream_of_or_within
ISO
MGI:3054951 (PMID:16757682)
RGD
PMID:16757682
NCBI chr11:23,888,586...23,917,612
Ensembl chr11:23,888,815...23,917,605
G
H4c14
H4 clustered histone 14
involved_in
ISO
(PMID:18474616)
RGD
PMID:18474616
NCBI chr 2:183,831,601...183,831,996
Ensembl chr 2:183,825,994...183,832,048
G
H4cl1
histone H4C like 1
involved_in
ISO
(PMID:18474616)
RGD
PMID:18474616
NCBI chr17:41,368,743...41,426,735
G
Hist1h4b
histone cluster 1 H4 family member B
involved_in
ISO
(PMID:18474616)
RGD
PMID:18474616
NCBI chr17:42,480,467...42,484,912
Ensembl chr17:42,480,313...42,485,370
G
Hist1h4m
histone cluster 1, H4m
involved_in
ISO
(PMID:18474616)
RGD
PMID:18474616
NCBI chr17:42,698,016...42,698,420
Ensembl chr17:42,698,025...42,698,958
G
Mir486
microRNA 486
involved_in
ISO
(PMID:25857263)
RGD
PMID:25857263
G
Myb
MYB proto-oncogene, transcription factor
involved_in
ISO
(PMID:25857263)
RGD
PMID:25857263
NCBI chr 1:15,939,771...15,973,367
Ensembl chr 1:15,939,761...15,973,057
G
Pf4
platelet factor 4
involved_in
ISS ISO
GO_REF:0000024 (PMID:2140694)
UniProt RGD
PMID:2140694
GO_REF:0000024
NCBI chr14:17,298,304...17,299,220
Ensembl chr14:17,298,308...17,299,365
G
Prmt1
protein arginine methyltransferase 1
involved_in
ISO ISS
(PMID:20442406) GO_REF:0000024
RGD UniProt
PMID:20442406
GO_REF:0000024
NCBI chr 1:95,458,853...95,468,176
Ensembl chr 1:95,458,850...95,468,345
G
Ccnb1
cyclin B1
involved_in
ISO
(PMID:12954723)
RGD
PMID:12954723
NCBI chr 2:31,912,190...31,921,163
Ensembl chr 2:31,912,193...31,921,172
G
Ccnb2
cyclin B2
involved_in
ISO
(PMID:12954723)
RGD
PMID:12954723
NCBI chr 8:71,087,594...71,100,794
Ensembl chr 8:71,087,595...71,100,874
G
Fzr1
fizzy and cell division cycle 20 related 1
involved_in
ISO
(PMID:18753608)
RGD
PMID:18753608
NCBI chr 7:8,332,029...8,343,953
Ensembl chr 7:8,332,029...8,343,952
G
Gpr3
G protein-coupled receptor 3
involved_in
ISO
(PMID:22685609)
RGD
PMID:22685609
NCBI chr 5:145,411,500...145,414,621
Ensembl chr 5:145,411,510...145,414,590
G
Grb14
growth factor receptor bound protein 14
involved_in
IMP
PMID:14623073
CAFA
PMID:14623073
RGD:12793049
NCBI chr 3:49,568,210...49,683,805
Ensembl chr 3:49,568,210...49,683,889
G
Prkaca
protein kinase cAMP-activated catalytic subunit alpha
involved_in
ISO
(PMID:22674394)
RGD
PMID:22674394
NCBI chr19:24,155,081...24,178,430
Ensembl chr19:24,155,090...24,178,430
G
Wee2
WEE2 oocyte meiosis inhibiting kinase
involved_in
ISO
(PMID:19550110)
RGD
PMID:19550110
NCBI chr 4:69,239,043...69,261,576
Ensembl chr 4:69,239,299...69,261,093
G
Fgl2
fibrinogen-like 2
acts_upstream_of_or_within
ISO
MGI:3582343 (PMID:29341118)
RGD
PMID:29341118
NCBI chr 4:13,710,566...13,716,207
Ensembl chr 4:13,710,575...13,716,207
G
Ifnl1
interferon, lambda 1
involved_in
ISO
(PMID:19346497)
RGD
PMID:19346497
NCBI chr 1:83,798,651...83,800,297
Ensembl chr 1:83,798,703...83,800,235
G
Gsk3b
glycogen synthase kinase 3 beta
involved_in
ISO IEA
(PMID:24023731) GO_REF:0000107
RGD Ensembl
PMID:24023731
GO_REF:0000107
NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
G
Mir154
microRNA 154
acts_upstream_of_or_within
ISO
(PMID:25959411)
RGD
PMID:25959411
NCBI chr 6:128,752,947...128,753,030
Ensembl chr 6:128,752,947...128,753,030
G
Rest
RE1-silencing transcription factor
involved_in
ISO
(PMID:18570921)
RGD
PMID:18570921
NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354
G
Cited1
Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1
involved_in
IMP
PMID:15843474
UniProt
PMID:15843474
RGD:8554075
NCBI chr X:67,350,376...67,355,072
Ensembl chr X:67,350,373...67,355,162
G
Ctnnb1
catenin beta 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:17537789)
Ensembl RGD
PMID:17537789
GO_REF:0000107
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
G
Sall1
spalt-like transcription factor 1
acts_upstream_of_or_within
ISO
MGI:3603818 (PMID:24550112)
RGD
PMID:24550112
NCBI chr19:18,005,782...18,022,705
Ensembl chr19:18,007,503...18,022,705
G
Dkk1
dickkopf WNT signaling pathway inhibitor 1
involved_in
ISO
(PMID:20559569)
RGD
PMID:20559569
NCBI chr 1:228,381,521...228,385,202
Ensembl chr 1:228,381,521...228,385,202
G
Mesp1
mesoderm posterior bHLH transcription factor 1
involved_in
ISO
(MGI:4441249|PMID:18593560)
RGD
PMID:18593560
MGI:4441249
NCBI chr 1:133,738,357...133,739,875
Ensembl chr 1:133,738,357...133,739,875
G
Sfrp2
secreted frizzled-related protein 2
acts_upstream_of_or_within
ISO
MGI:98956 (PMID:17462603)
RGD
PMID:17462603
NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063
G
Apcs
amyloid P component, serum
involved_in
IEA ISO
GO_REF:0000107 (PMID:14607961)
Ensembl RGD
PMID:14607961
GO_REF:0000107
NCBI chr13:85,373,219...85,374,195
Ensembl chr13:85,373,220...85,374,298
G
Cdk6
cyclin-dependent kinase 6
involved_in
ISO
(PMID:26542173)
RGD
PMID:26542173
NCBI chr 4:30,637,650...30,829,688
Ensembl chr 4:30,646,460...30,829,634
G
Gpr68
G protein-coupled receptor 68
acts_upstream_of_or_within
ISO
MGI:3849457 (PMID:19479052)
RGD
PMID:19479052
NCBI chr 6:120,135,620...120,166,089
Ensembl chr 6:120,135,436...120,166,089
G
Hoxa7
homeobox A7
involved_in
ISO IEA
(PMID:14704364) GO_REF:0000107
RGD Ensembl
PMID:14704364
GO_REF:0000107
NCBI chr 4:81,315,730...81,317,629
Ensembl chr 4:81,314,625...81,317,659
G
Inpp5d
inositol polyphosphate-5-phosphatase D
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2386884 (PMID:9620849)
Ensembl RGD
PMID:9620849
GO_REF:0000107
NCBI chr 9:88,287,680...88,392,748
Ensembl chr 9:88,287,677...88,392,746
G
Mir125b1
microRNA 125b-1
involved_in
ISO
(PMID:28389358)
RGD
PMID:28389358
NCBI chr 8:41,952,966...41,953,052
Ensembl chr 8:41,952,966...41,953,052
G
Mir125b2
microRNA 125b-2
involved_in
ISO
(PMID:28389358)
RGD
PMID:28389358
NCBI chr11:16,245,620...16,245,707
G
Myc
MYC proto-oncogene, bHLH transcription factor
involved_in
ISO ISS
(PMID:9924025) GO_REF:0000024
RGD UniProt
PMID:9924025
GO_REF:0000024
NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
G
Zbtb46
zinc finger and BTB domain containing 46
acts_upstream_of_or_within
ISO
MGI:5320483 (PMID:22615127)
RGD
PMID:22615127
NCBI chr 3:168,497,294...168,567,799
Ensembl chr 3:168,499,583...168,568,782
G
Bmp2
bone morphogenetic protein 2
involved_in
ISO
(PMID:7798324)
RGD
PMID:7798324
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
G
Bmpr1a
bone morphogenetic protein receptor type 1A
involved_in
ISO
(PMID:10564272)
RGD
PMID:10564272
NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
G
Bmpr2
bone morphogenetic protein receptor type 2
involved_in
ISO
(PMID:21976273)
RGD
PMID:21976273
NCBI chr 9:61,192,718...61,307,280
Ensembl chr 9:61,190,566...61,301,809
G
Id2
inhibitor of DNA binding 2
involved_in
ISO
(MGI:1934945|PMID:10652346)
RGD
PMID:10652346
MGI:1934945
NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400
G
Igf2
insulin-like growth factor 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:6467708|PMID:32557799)
UniProt RGD
PMID:32557799
GO_REF:0000024 MGI:6467708
NCBI chr 1:197,814,409...197,831,802
Ensembl chr 1:197,814,410...197,823,018
G
Ptbp1
polypyrimidine tract binding protein 1
involved_in
ISO ISS
(PMID:21518792) GO_REF:0000024
RGD UniProt
PMID:21518792
GO_REF:0000024
NCBI chr 7:9,842,574...9,852,332
Ensembl chr 7:9,842,574...9,852,397
G
Smad1
SMAD family member 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:21976273)
Ensembl RGD
PMID:21976273
GO_REF:0000107
NCBI chr19:28,513,130...28,573,665
Ensembl chr19:28,513,131...28,573,651
G
Tcf23
transcription factor 23
involved_in
ISO
(MGI:1934945|PMID:10652346)
RGD
PMID:10652346
MGI:1934945
NCBI chr 6:25,397,889...25,406,639
Ensembl chr 6:25,397,937...25,405,880
G
Tnpo2
transportin 2
acts_upstream_of_or_within
ISO
(PMID:17475777)
RGD
PMID:17475777
NCBI chr19:23,099,398...23,119,696
Ensembl chr19:23,099,401...23,119,596
G
Zbed6
zinc finger, BED-type containing 6
involved_in
ISO
(MGI:6467708|PMID:32557799)
RGD
PMID:32557799
MGI:6467708
NCBI chr13:45,107,253...45,113,524
Ensembl chr13:45,071,718...45,114,009
G
Cdc73
cell division cycle 73
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:20541477)
UniProt Ensembl RGD
PMID:20541477
GO_REF:0000024 GO_REF:0000107
NCBI chr13:55,357,226...55,449,690
Ensembl chr13:55,357,226...55,449,656
G
Cdk6
cyclin-dependent kinase 6
involved_in
ISO
(PMID:17431401)
RGD
PMID:17431401
NCBI chr 4:30,637,650...30,829,688
Ensembl chr 4:30,646,460...30,829,634
G
Ctr9
CTR9 homolog, Paf1/RNA polymerase II complex component
involved_in
ISO
(PMID:20541477)
RGD
PMID:20541477
NCBI chr 1:165,137,277...165,167,303
Ensembl chr 1:165,137,215...165,167,303
G
Dll1
delta like canonical Notch ligand 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:16621992)
Ensembl RGD
PMID:16621992
GO_REF:0000107
NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
G
Gata2
GATA binding protein 2
acts_upstream_of_or_within
ISO
(PMID:16621992)
RGD
PMID:16621992
NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
G
Gpr171
G protein-coupled receptor 171
acts_upstream_of_or_within
ISO
(PMID:23022127)
RGD
PMID:23022127
NCBI chr 2:143,360,402...143,365,494
Ensembl chr 2:143,359,564...143,366,698
G
Hmgb3
high mobility group box 3
acts_upstream_of_or_within
ISO
(PMID:12714519)
RGD
PMID:12714519
NCBI chr X:149,296,303...149,301,290
Ensembl chr X:149,296,375...149,301,292
G
Hoxa9
homeobox A9
involved_in
ISO
(MGI:5447628|PMID:11438208)
RGD
PMID:11438208
MGI:5447628
NCBI chr 4:81,323,235...81,329,344
Ensembl chr 4:81,323,382...81,326,358
G
Hoxb8
homeo box B8
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:5447628|PMID:11438208) GO_REF:0000024
Ensembl RGD UniProt
PMID:11438208
GO_REF:0000024 GO_REF:0000107 MGI:5447628
NCBI chr10:81,248,313...81,251,261
Ensembl chr10:81,248,887...81,250,638
G
Itpkb
inositol-trisphosphate 3-kinase B
acts_upstream_of_or_within
ISO
MGI:2680720 (PMID:18339802)
RGD
PMID:18339802
NCBI chr13:92,069,160...92,164,281
Ensembl chr13:92,069,216...92,162,004
G
Leo1
LEO1 homolog, Paf1/RNA polymerase II complex component
involved_in
ISO ISS
(PMID:20541477) GO_REF:0000024
RGD UniProt
PMID:20541477
GO_REF:0000024
NCBI chr 8:76,199,547...76,223,983
Ensembl chr 8:76,199,099...76,223,983
G
Meis1
Meis homeobox 1
involved_in
ISO
(MGI:5447628|PMID:11438208)
RGD
PMID:11438208
MGI:5447628
NCBI chr14:93,155,426...93,294,373
Ensembl chr14:93,155,419...93,294,265
G
Meis2
Meis homeobox 2
involved_in
ISO
(MGI:5447628|PMID:11438208)
RGD
PMID:11438208
MGI:5447628
NCBI chr 3:102,742,904...102,944,833
Ensembl chr 3:102,742,900...102,949,696
G
Nfkbia
NFKB inhibitor alpha
acts_upstream_of_or_within
ISO
MGI:2176180|MGI:3577709 (PMID:15845452)
RGD
PMID:15845452
NCBI chr 6:72,858,713...72,861,941
Ensembl chr 6:72,858,712...72,861,941
G
Paf1
PAF1 homolog, Paf1/RNA polymerase II complex component
involved_in
ISO ISS
(PMID:20541477) GO_REF:0000024
RGD UniProt
PMID:20541477
GO_REF:0000024
NCBI chr 1:83,683,654...83,689,233
Ensembl chr 1:83,668,813...83,689,237
G
Ptk2b
protein tyrosine kinase 2 beta
involved_in
ISO
(PMID:15050747)
RGD
PMID:15050747
NCBI chr15:40,360,722...40,481,235
Ensembl chr15:40,360,723...40,481,282
G
Rbm15
RNA binding motif protein 15
acts_upstream_of_or_within
ISO
(PMID:17283045)
RGD
PMID:17283045
NCBI chr 2:194,945,974...194,954,498
Ensembl chr 2:194,945,974...194,954,703
G
Skic8
SKI8 subunit of superkiller complex
involved_in
ISO IEA ISS
(PMID:20541477) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:20541477
GO_REF:0000024 GO_REF:0000107
NCBI chr 8:55,103,542...55,120,837
Ensembl chr 8:55,103,545...55,120,813
G
Twist2
twist family bHLH transcription factor 2
acts_upstream_of_or_within
ISO
MGI:3044412 (PMID:19090621)
RGD
PMID:19090621
NCBI chr 9:92,374,740...92,419,222
Ensembl chr 9:92,374,574...92,419,222
G
Zbtb16
zinc finger and BTB domain containing 16
involved_in
ISS ISO
GO_REF:0000024 (MGI:3687421|PMID:8541544)
UniProt RGD
PMID:8541544
GO_REF:0000024 MGI:3687421
NCBI chr 8:48,989,376...49,177,011
Ensembl chr 8:48,994,566...49,177,011
G
Zfp36
zinc finger protein 36
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2652418 (PMID:11588035)
Ensembl RGD
PMID:11588035
GO_REF:0000107
NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564
G
Lyn
LYN proto-oncogene, Src family tyrosine kinase
involved_in
ISO
(MGI:2152233|PMID:11672542)
RGD
PMID:11672542
MGI:2152233
NCBI chr 5:16,639,512...16,755,501
Ensembl chr 5:16,639,466...16,756,868
G
Nme1
NME/NM23 nucleoside diphosphate kinase 1
IDA
RGD
PMID:7737424
RGD:2299083
NCBI chr10:78,907,036...78,929,659
Ensembl chr10:78,906,083...78,916,408
G
Nme2
NME/NM23 nucleoside diphosphate kinase 2
IDA
RGD
PMID:7737424
RGD:2299083
NCBI chr10:78,898,097...78,903,514
Ensembl chr10:78,897,770...78,903,538
G
Dpf2
double PHD fingers 2
involved_in
ISO
(PMID:28533407)
RGD
PMID:28533407
NCBI chr 1:203,183,674...203,199,037
Ensembl chr 1:203,183,686...203,198,983
G
Ankrd2
ankyrin repeat domain 2
involved_in
ISO
(PMID:21737686) (MGI:5317372|PMID:21737686), (MGI:5527051|PMID:23824195)
RGD
PMID:21737686 PMID:23824195
MGI:5317372 MGI:5527051
NCBI chr 1:240,847,111...240,856,563
Ensembl chr 1:240,847,072...240,856,566
G
Bmp4
bone morphogenetic protein 4
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:14749725) GO_REF:0000107
RGD Ensembl
PMID:14749725
GO_REF:0000107
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Ccl17
C-C motif chemokine ligand 17
acts_upstream_of_or_within
ISO
(PMID:23844157)
RGD
PMID:23844157
NCBI chr19:10,202,128...10,203,903
Ensembl chr19:10,202,128...10,203,819
G
Cmtm5
CKLF-like MARVEL transmembrane domain containing 5
acts_upstream_of_or_within
ISO
(PMID:23844157)
RGD
PMID:23844157
NCBI chr15:28,412,624...28,415,304
Ensembl chr15:28,412,624...28,415,287
G
Csrp3
cysteine and glycine rich protein 3
acts_upstream_of_or_within
ISO
(PMID:24860983)
RGD
PMID:24860983
NCBI chr 1:98,528,067...98,546,647
Ensembl chr 1:98,528,068...98,546,653
G
Cxcl10
C-X-C motif chemokine ligand 10
acts_upstream_of_or_within
ISO
(PMID:23844157)
RGD
PMID:23844157
NCBI chr14:15,704,772...15,706,969
Ensembl chr14:15,704,758...15,706,975
G
Cxcl14
C-X-C motif chemokine ligand 14
acts_upstream_of_or_within
ISO
(PMID:23844157)
RGD
PMID:23844157
NCBI chr17:8,317,930...8,325,956
Ensembl chr17:8,317,933...8,324,839
G
Ddit3
DNA-damage inducible transcript 3
involved_in
ISS ISO
GO_REF:0000024 (MGI:5448505|PMID:22242125)
UniProt RGD
PMID:22242125
GO_REF:0000024 MGI:5448505
NCBI chr 7:63,115,645...63,121,203
Ensembl chr 7:63,116,380...63,121,201
G
Dll1
delta like canonical Notch ligand 1
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:3701154|PMID:17194759) GO_REF:0000107
UniProt RGD Ensembl
PMID:17194759
GO_REF:0000024 GO_REF:0000107 MGI:3701154
NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
G
Eid2b
EP300 interacting inhibitor of differentiation 2B
involved_in
ISO
(PMID:15970276)
RGD
PMID:15970276
NCBI chr 1:83,545,530...83,547,338
Ensembl chr 1:83,545,563...83,546,734
G
Gdf3
growth differentiation factor 3
acts_upstream_of_or_within
ISO
(PMID:23844157)
RGD
PMID:23844157
NCBI chr 4:155,831,572...155,835,953
Ensembl chr 4:155,830,909...155,835,937
G
Id3
inhibitor of DNA binding 3
involved_in
ISO
(MGI:5527051|PMID:23824195)
RGD
PMID:23824195
MGI:5527051
NCBI chr 5:148,372,784...148,374,353
Ensembl chr 5:148,372,762...148,374,349
G
Il18
interleukin 18
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:23844157)
Ensembl RGD
PMID:23844157
GO_REF:0000107
NCBI chr 8:50,904,630...50,932,887
Ensembl chr 8:50,906,960...50,932,887
G
Il36g
interleukin 36, gamma
acts_upstream_of_or_within
ISO
(PMID:23844157)
RGD
PMID:23844157
NCBI chr 3:6,948,323...6,954,485
Ensembl chr 3:6,948,297...6,954,480
G
Mbnl3
muscleblind-like splicing regulator 3
acts_upstream_of_or_within
ISO
(PMID:12297108)
RGD
PMID:12297108
NCBI chr X:130,641,942...130,737,179
Ensembl chr X:130,648,538...130,737,056
G
Mkx
mohawk homeobox
acts_upstream_of_or_within
ISO
(PMID:19235719)
RGD
PMID:19235719
NCBI chr17:55,077,073...55,156,877
Ensembl chr17:55,077,540...55,156,124
G
Mstn
myostatin
involved_in
ISO
(PMID:19357233)
RGD
PMID:19357233
NCBI chr 9:48,452,533...48,458,933
Ensembl chr 9:48,452,533...48,458,933
G
Nmrk2
nicotinamide riboside kinase 2
acts_upstream_of_or_within
ISO
(PMID:10613898)
RGD
PMID:10613898
NCBI chr 7:8,514,855...8,517,916
Ensembl chr 7:8,514,927...8,517,922
G
Notch1
notch receptor 1
involved_in
ISO
(PMID:10713164)
RGD
PMID:10713164
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Ppard
peroxisome proliferator-activated receptor delta
involved_in
ISO
(MGI:5319147|PMID:22040534)
RGD
PMID:22040534
MGI:5319147
NCBI chr20:6,298,785...6,363,970
Ensembl chr20:6,298,785...6,363,968
G
Sostdc1
sclerostin domain containing 1
involved_in
ISO
(PMID:15020244)
RGD
PMID:15020244
NCBI chr 6:53,051,336...53,055,510
Ensembl chr 6:53,051,354...53,055,579
G
Sox4
SRY-box transcription factor 4
involved_in
ISO
(PMID:26291311)
RGD
PMID:26291311
NCBI chr17:35,667,809...35,672,515
Ensembl chr17:35,667,537...35,673,665
G
Sox8
SRY-box transcription factor 8
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 (PMID:12782625)
UniProt RGD
PMID:12782625
GO_REF:0000024
NCBI chr10:14,584,829...14,589,818
Ensembl chr10:14,584,829...14,589,818
G
Sox9
SRY-box transcription factor 9
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 (PMID:12782625)
UniProt RGD
PMID:12782625
GO_REF:0000024
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
G
Sra1
steroid receptor RNA activator 1
involved_in
ISO ISS IEA
(PMID:20855289) GO_REF:0000024 GO_REF:0000107
RGD UniProt Ensembl
PMID:20855289
GO_REF:0000024 GO_REF:0000107
NCBI chr18:28,269,192...28,273,023
Ensembl chr18:28,269,311...28,272,538
G
Tbx3
T-box transcription factor 3
involved_in
ISS ISO
GO_REF:0000024 (PMID:12032820)
UniProt RGD
PMID:12032820
GO_REF:0000024
NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708
G
Tgfb1
transforming growth factor, beta 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:9770491)
UniProt RGD
PMID:9770491
GO_REF:0000024
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
G
Tmem182
transmembrane protein 182
involved_in
ISO
(MGI:6810807|PMID:34427057)
RGD
PMID:34427057
MGI:6810807
NCBI chr 9:43,059,432...43,111,318
Ensembl chr 9:43,059,439...43,111,317
G
Tnf
tumor necrosis factor
acts_upstream_of_or_within
ISO
(PMID:23844157)
RGD
PMID:23844157
NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
G
Zfhx3
zinc finger homeobox 3
involved_in
ISO
(PMID:11312261)
RGD
PMID:11312261
NCBI chr19:36,257,196...36,886,104
Ensembl chr19:36,630,254...36,881,771
G
Mir27b
microRNA 27b
acts_upstream_of
ISO
(PMID:28095798)
RGD
PMID:28095798
NCBI chr17:1,813,427...1,813,523
Ensembl chr17:1,813,426...1,813,529
G
Mir9-3
microRNA 9-3
involved_in
ISO
(PMID:26315535)
RGD
PMID:26315535
NCBI chr 1:133,440,049...133,440,138
G
Mir98
microRNA 98
involved_in
ISO
(PMID:28251559)
RGD
PMID:28251559
NCBI chr X:20,981,235...20,981,342
Ensembl chr X:20,981,235...20,981,342
G
Pdcd4
programmed cell death 4
involved_in
ISO
(PMID:20533548)
RGD
PMID:20533548
NCBI chr 1:252,921,342...252,944,278
Ensembl chr 1:252,921,392...252,944,275
G
Rb1
RB transcriptional corepressor 1
involved_in
IEA ISO
GO_REF:0000107 (MGI:6112863|PMID:29304157)
Ensembl RGD
PMID:29304157
GO_REF:0000107 MGI:6112863
NCBI chr15:48,371,295...48,502,473
Ensembl chr15:48,371,296...48,502,302
G
Tp53inp1
tumor protein p53 inducible nuclear protein 1
involved_in
ISO
(MGI:5788610|PMID:26589288)
RGD
PMID:26589288
MGI:5788610
NCBI chr 5:24,253,986...24,272,250
Ensembl chr 5:24,260,568...24,267,968
G
Tsku
tsukushi, small leucine rich proteoglycan
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:6478057|PMID:25159578) GO_REF:0000024
Ensembl RGD UniProt
PMID:25159578
GO_REF:0000024 GO_REF:0000107 MGI:6478057
NCBI chr 1:152,660,259...152,671,682
Ensembl chr 1:152,656,693...152,672,588
G
Ankrd2
ankyrin repeat domain 2
acts_upstream_of_or_within
ISO
(PMID:18302940), (PMID:23824195)
RGD
PMID:18302940 PMID:23824195
NCBI chr 1:240,847,111...240,856,563
Ensembl chr 1:240,847,072...240,856,566
G
Bdnf
brain-derived neurotrophic factor
involved_in
IMP
PMID:16723531
BHF-UCL
PMID:16723531
RGD:1580249
NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
G
Bhlha15
basic helix-loop-helix family, member a15
involved_in
ISS ISO
GO_REF:0000024 (MGI:5607242|PMID:17612490)
UniProt RGD
PMID:17612490
GO_REF:0000024 MGI:5607242
NCBI chr12:10,420,465...10,424,641
Ensembl chr12:10,420,467...10,424,713
G
Bhlhe41
basic helix-loop-helix family, member e41
involved_in
ISO IEA
(MGI:5297791|PMID:12657651) GO_REF:0000107
RGD Ensembl
PMID:12657651
GO_REF:0000107 MGI:5297791
NCBI chr 4:178,834,264...178,838,618
Ensembl chr 4:178,834,271...178,838,468
G
Ccn3
cellular communication network factor 3
involved_in
ISS ISO
GO_REF:0000024 (PMID:12050162)
UniProt RGD
PMID:12050162
GO_REF:0000024
NCBI chr 7:86,094,000...86,101,022
Ensembl chr 7:86,094,000...86,101,019
G
Csf1r
colony stimulating factor 1 receptor
IMP
RGD
PMID:7737360
RGD:151665771
NCBI chr18:54,546,673...54,590,418
Ensembl chr18:54,546,659...54,590,415
G
Daxx
death-domain associated protein
IDA
RGD
PMID:19308989
RGD:9587764
NCBI chr20:4,970,090...4,976,145
Ensembl chr20:4,970,092...4,975,843
G
Hdac1
histone deacetylase 1
NOT|involved_in
ISO
(PMID:10983972)
RGD
PMID:10983972
NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111
G
Hdac3
histone deacetylase 3
NOT|involved_in
ISO
(PMID:10983972)
RGD
PMID:10983972
NCBI chr18:29,770,637...29,789,850
Ensembl chr18:29,770,636...29,793,856
G
Hdac4
histone deacetylase 4
involved_in
ISO
(PMID:10983972)
RGD
PMID:10983972
NCBI chr 9:92,503,467...92,750,164
Ensembl chr 9:92,507,611...92,750,164
G
Hdac5
histone deacetylase 5
involved_in
ISO
(PMID:10983972), (PMID:11081517)
RGD
PMID:10983972 PMID:11081517
NCBI chr10:87,152,978...87,187,921
Ensembl chr10:87,152,978...87,188,235
G
Myocd
myocardin
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3849559 (PMID:17940050)
Ensembl RGD
PMID:17940050
GO_REF:0000107
NCBI chr10:49,833,219...49,928,806
Ensembl chr10:49,836,641...49,927,627
G
Nkx2-5
NK2 homeobox 5
involved_in
ISO IEA
(PMID:15653675) GO_REF:0000107
RGD Ensembl
PMID:15653675
GO_REF:0000107
NCBI chr10:16,340,428...16,347,004
Ensembl chr10:16,344,159...16,346,934
G
Notch1
notch receptor 1
involved_in
ISO
(MGI:5319604|PMID:18299578)
RGD
PMID:18299578
MGI:5319604
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Plpp7
phospholipid phosphatase 7 (inactive)
acts_upstream_of_or_within
ISO
MGI:1928394 (PMID:19704009)
RGD
PMID:19704009
NCBI chr 3:15,384,461...15,398,820
Ensembl chr 3:15,384,492...15,398,883
G
Rpl3l
ribosomal protein L3-like
involved_in
ISO
(MGI:6838892|PMID:26684695)
RGD
PMID:26684695
MGI:6838892
NCBI chr10:13,753,914...13,764,458
Ensembl chr10:13,753,886...13,764,457
G
Tmem119
transmembrane protein 119
involved_in
ISO
(MGI:6294241|PMID:22579779)
RGD
PMID:22579779
MGI:6294241
NCBI chr12:42,828,621...42,835,678
Ensembl chr12:42,828,418...42,835,689
G
Trim72
tripartite motif containing 72
acts_upstream_of_or_within
ISO
(PMID:23965929)
RGD
PMID:23965929
NCBI chr 1:182,613,753...182,621,613
Ensembl chr 1:182,613,712...182,621,606
G
Xbp1
X-box binding protein 1
involved_in
ISO
(MGI:5607242|PMID:17612490)
RGD
PMID:17612490
MGI:5607242
NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
G
Pglyrp1
peptidoglycan recognition protein 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2670590 (PMID:20709292)
Ensembl RGD
PMID:20709292
GO_REF:0000107
NCBI chr 1:78,531,815...78,537,001
Ensembl chr 1:78,531,815...78,537,001
G
Pglyrp2
peptidoglycan recognition protein 2
acts_upstream_of_or_within
ISO
MGI:5297105 (PMID:20709292)
RGD
PMID:20709292
NCBI chr 7:11,418,674...11,432,162
Ensembl chr 7:11,418,880...11,427,773
G
Pglyrp3
peptidoglycan recognition protein 3
acts_upstream_of_or_within
ISO
MGI:5297106 (PMID:20709292)
RGD
PMID:20709292
NCBI chr 2:177,479,693...177,490,769
Ensembl chr 2:177,477,407...177,490,736 Ensembl chr 2:177,477,407...177,490,736
G
Pglyrp4
peptidoglycan recognition protein 4
acts_upstream_of_or_within
ISO
MGI:5297107 (PMID:20709292)
RGD
PMID:20709292
NCBI chr 2:176,202,654...176,322,859
Ensembl chr 2:176,218,519...176,242,251
G
Osr1
odd-skipped related transcription factor 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:3697513|PMID:16790474)
UniProt RGD
PMID:16790474
GO_REF:0000024 MGI:3697513
NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817
G
Fuz
fuzzy planar cell polarity protein
involved_in
ISS ISO
GO_REF:0000024 (MGI:5498583|PMID:23806618)
UniProt RGD
PMID:23806618
GO_REF:0000024 MGI:5498583
NCBI chr 1:95,379,542...95,384,532
Ensembl chr 1:95,379,587...95,384,530
G
Bdnf
brain-derived neurotrophic factor
acts_upstream_of_or_within
ISO
(PMID:12798291)
RGD
PMID:12798291
NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
G
Btg2
BTG anti-proliferation factor 2
acts_upstream_of_or_within
ISO
MGI:3525505 (PMID:20020054)
RGD
PMID:20020054
NCBI chr13:45,531,881...45,535,642
Ensembl chr13:45,531,925...45,535,628
G
Cd24
CD24 molecule
acts_upstream_of_or_within
ISO
MGI:2179996 (PMID:11978835)
RGD
PMID:11978835
NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662
G
Ctnna1
catenin alpha 1
acts_upstream_of_or_within
ISO
MGI:108075|MGI:2176173|MGI:2677796 (PMID:16543460)
RGD
PMID:16543460
NCBI chr18:26,728,246...26,860,911
Ensembl chr18:26,728,485...26,860,910
G
Fgfr3
fibroblast growth factor receptor 3
acts_upstream_of_or_within
ISO
MGI:2135676 (PMID:15708559)
RGD
PMID:15708559
NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341
G
Gata2
GATA binding protein 2
acts_upstream_of_or_within
ISO
MGI:1857743 (PMID:16672344)
RGD
PMID:16672344
NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
G
Kctd11
potassium channel tetramerization domain containing 11
acts_upstream_of_or_within
ISO
(PMID:16148242)
RGD
PMID:16148242
NCBI chr10:54,602,575...54,604,738
Ensembl chr10:54,599,754...54,604,760
G
Kifap3
kinesin-associated protein 3
acts_upstream_of_or_within
ISO
MGI:3043822|MGI:3579409|MGI:3579410 (PMID:15834408)
RGD
PMID:15834408
NCBI chr13:76,127,702...76,264,654
Ensembl chr13:76,127,696...76,264,650
G
Mir137
microRNA 137
involved_in
ISO
(PMID:23400681)
RGD
PMID:23400681
NCBI chr 2:206,480,881...206,480,982
Ensembl chr 2:206,480,884...206,480,985
G
Nf1
neurofibromin 1
involved_in acts_upstream_of_or_within
ISS ISO IEA
GO_REF:0000024 MGI:1857444 (PMID:15944386), (PMID:7926784) GO_REF:0000107
HGNC-UCL RGD Ensembl
PMID:7926784 PMID:15944386
GO_REF:0000024 GO_REF:0000107
NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658
G
Pax6
paired box 6
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3521718 (PMID:15548580)
Ensembl RGD
PMID:15548580
GO_REF:0000107
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
G
Prox1
prospero homeobox 1
acts_upstream_of_or_within
ISO
MGI:2386336 (PMID:12692551)
RGD
PMID:12692551
NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
G
Ptn
pleiotrophin
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:3045656|PMID:15121180)
UniProt Ensembl RGD
PMID:15121180
GO_REF:0000024 GO_REF:0000107 MGI:3045656
NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456
G
Tgfb1
transforming growth factor, beta 1
IDA
RGD
PMID:16177030
RGD:1579761
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
G
Tp53
tumor protein p53
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:97306 (PMID:9608530)
Ensembl RGD
PMID:9608530
GO_REF:0000107
NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
G
Vax1
ventral anterior homeobox 1
acts_upstream_of_or_within
ISO
MGI:1859863 (PMID:15590934)
RGD
PMID:15590934
NCBI chr 1:258,324,571...258,342,396
Ensembl chr 1:258,326,276...258,330,192
G
Vsx2
visual system homeobox 2
acts_upstream_of_or_within
ISO
MGI:1856112 (PMID:16384989)
RGD
PMID:16384989
NCBI chr 6:104,214,842...104,240,264
Ensembl chr 6:104,217,230...104,240,018
G
Abcc8
ATP binding cassette subfamily C member 8
IMP
RGD
PMID:23149556
RGD:12790979
NCBI chr 1:96,598,568...96,679,563
Ensembl chr 1:96,598,647...96,679,510
G
Appl2
adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2
involved_in
ISO
(MGI:6271956|PMID:28965332), (MGI:6272332|PMID:29675572)
RGD
PMID:28965332 PMID:29675572
MGI:6271956 MGI:6272332
NCBI chr 7:20,135,248...20,184,757
Ensembl chr 7:20,135,375...20,184,754
G
Arhgef2
Rho/Rac guanine nucleotide exchange factor 2
involved_in
ISO
(MGI:4457234|PMID:19448628)
RGD
PMID:19448628
MGI:4457234
NCBI chr 2:174,061,126...174,118,355
Ensembl chr 2:174,062,976...174,118,355
G
Atf5
activating transcription factor 5
IDA
RGD
PMID:12805299
RGD:634608
NCBI chr 1:95,295,602...95,299,755
Ensembl chr 1:95,295,610...95,299,707
G
B2m
beta-2 microglobulin
involved_in
ISO IEA
(PMID:26147761) GO_REF:0000107 (MGI:5708430|PMID:26147761)
RGD Ensembl
PMID:26147761
GO_REF:0000107 MGI:5708430
NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766
G
Bmp7
bone morphogenetic protein 7
acts_upstream_of_or_within
ISO
(PMID:17699604)
RGD
PMID:17699604
NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
G
Bmpr1a
bone morphogenetic protein receptor type 1A
acts_upstream_of_or_within
ISO
MGI:2158342 (PMID:17699604)
RGD
PMID:17699604
NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
G
Brinp1
BMP/retinoic acid inducible neural specific 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:5698819 (PMID:24528488)
Ensembl RGD
PMID:24528488
GO_REF:0000107
NCBI chr 5:82,348,501...82,550,506
Ensembl chr 5:82,348,930...82,493,150
G
Ccl11
C-C motif chemokine ligand 11
involved_in
ISO
(MGI:6211487|PMID:21886162)
RGD
PMID:21886162
MGI:6211487
NCBI chr10:67,028,328...67,032,929
Ensembl chr10:67,028,328...67,032,926
G
Cd24
CD24 molecule
acts_upstream_of_or_within
ISO
MGI:2179996 (PMID:15737737)
RGD
PMID:15737737
NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662
G
Ctdsp1
CTD small phosphatase 1
acts_upstream_of_or_within
ISO
MGI:104897 (PMID:17403776)
RGD
PMID:17403776
NCBI chr 9:75,973,694...75,979,298
Ensembl chr 9:75,973,962...75,979,297
G
Ctnnb1
catenin beta 1
involved_in
ISO
(MGI:5699500|PMID:26371318)
RGD
PMID:26371318
MGI:5699500
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
G
Dll3
delta like canonical Notch ligand 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:9272948)
Ensembl RGD
PMID:9272948
GO_REF:0000107
NCBI chr 1:83,562,011...83,570,008
Ensembl chr 1:83,562,014...83,569,750
G
Dnajb11
DnaJ heat shock protein family (Hsp40) member B11
acts_upstream_of_or_within
ISO
PR:Q2EY15 (PMID:20335479)
RGD
PMID:20335479
NCBI chr11:78,151,750...78,168,259
Ensembl chr11:78,150,429...78,180,407
G
Dynlt1
dynein light chain Tctex-type 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:4457234|PMID:19448628)
UniProt RGD
PMID:19448628
GO_REF:0000024 MGI:4457234
NCBI chr 1:46,887,017...46,893,956
Ensembl chr 1:46,887,017...46,893,881
G
Hes1
hes family bHLH transcription factor 1
IMP
RGD
PMID:11399758
RGD:8554692
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
G
Hook3
hook microtubule-tethering protein 3
involved_in
ISO
(MGI:4457463|PMID:20152126)
RGD
PMID:20152126
MGI:4457463
NCBI chr16:65,954,293...66,058,812
Ensembl chr16:65,954,350...66,061,338
G
Il1b
interleukin 1 beta
IDA
RGD
PMID:22270046
RGD:6482669
NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
G
Kdm1a
lysine demethylase 1A
acts_upstream_of_or_within
ISO
(PMID:25018020)
RGD
PMID:25018020
NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319
G
Lhx2
LIM homeobox 2
involved_in
IEA ISO
GO_REF:0000107 (MGI:5699500|PMID:26371318), (MGI:5817507|PMID:28053041)
Ensembl RGD
PMID:26371318 PMID:28053041
GO_REF:0000107 MGI:5699500 MGI:5817507
NCBI chr 3:22,113,619...22,143,909
Ensembl chr 3:22,126,007...22,143,908
G
Mt3
metallothionein 3
involved_in acts_upstream_of_or_within
NAS ISO
PMID:12460603 (PMID:12130647)
RGD
PMID:12130647 PMID:12460603
RGD:727475
NCBI chr19:10,848,754...10,850,158
Ensembl chr19:10,848,755...10,850,158
G
Notch1
notch receptor 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:5319604|PMID:18299578)
UniProt RGD
PMID:18299578
GO_REF:0000024 MGI:5319604
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Pcm1
pericentriolar material 1
involved_in
ISO
(MGI:4457463|PMID:20152126)
RGD
PMID:20152126
MGI:4457463
NCBI chr16:51,008,315...51,105,261
Ensembl chr16:51,008,315...51,105,091
G
Pitx3
paired-like homeodomain 3
IDA
RGD
PMID:18385323
RGD:11535083
NCBI chr 1:245,001,106...245,013,881
Ensembl chr 1:245,001,164...245,013,892
G
Prtg
protogenin
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:20335479)
Ensembl RGD
PMID:20335479
GO_REF:0000107
NCBI chr 8:73,548,440...73,657,945
Ensembl chr 8:73,548,466...73,653,259
G
Rest
RE1-silencing transcription factor
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:2654470 (PMID:17403776)
UniProt RGD
PMID:17403776
GO_REF:0000024
NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354
G
Sorl1
sortilin related receptor 1
involved_in
ISO
(MGI:3801250|PMID:18362153)
RGD
PMID:18362153
MGI:3801250
NCBI chr 8:42,341,704...42,504,435
Ensembl chr 8:42,341,704...42,504,513
G
Trim11
tripartite motif-containing 11
involved_in
ISO
(MGI:3801352|PMID:18628401)
RGD
PMID:18628401
MGI:3801352
NCBI chr10:43,758,299...43,771,138
Ensembl chr10:43,758,354...43,771,138
G
Wnt3a
Wnt family member 3A
involved_in
ISO
(MGI:2667422|PMID:12843296)
RGD
PMID:12843296
MGI:2667422
NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324
G
Wnt7a
Wnt family member 7A
involved_in
ISO
(PMID:12843296)
RGD
PMID:12843296
NCBI chr 4:123,863,108...123,908,981
Ensembl chr 4:123,863,108...123,908,981
G
Wnt7b
Wnt family member 7B
involved_in
ISO
(MGI:2667422|PMID:12843296)
RGD
PMID:12843296
MGI:2667422
NCBI chr 7:116,634,817...116,679,459
Ensembl chr 7:116,634,814...116,679,581
G
Apbb1
amyloid beta precursor protein binding family B member 1
acts_upstream_of_or_within
ISO
MGI:3514266 (PMID:18278038)
RGD
PMID:18278038
NCBI chr 1:159,896,889...159,920,505
Ensembl chr 1:159,896,880...159,920,627
G
App
amyloid beta precursor protein
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:104518 (PMID:18278038)
Ensembl RGD
PMID:18278038
GO_REF:0000107
NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
G
Ascl1
achaete-scute family bHLH transcription factor 1
involved_in
IDA ISO
(PMID:12000752)
RGD
PMID:12000752 PMID:17936272
RGD:2314144
NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993
G
Aspm
assembly factor for spindle microtubules
acts_upstream_of_or_within
ISO
(PMID:16798874)
RGD
PMID:16798874
NCBI chr13:51,074,849...51,123,755
Ensembl chr13:51,074,849...51,123,755
G
Bex1
brain expressed X-linked 1
acts_upstream_of_or_within
IDA
PMID:16498402
MGI
PMID:16498402
RGD:8554704
NCBI chr X:99,219,014...99,220,518
Ensembl chr X:99,219,014...99,220,958
G
Bmp7
bone morphogenetic protein 7
acts_upstream_of_or_within
ISO
(PMID:16325379)
RGD
PMID:16325379
NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
G
Calr
calreticulin
involved_in
ISO
(PMID:8107809)
RGD
PMID:8107809
NCBI chr19:23,308,525...23,313,420
Ensembl chr19:23,308,351...23,313,414
G
Casz1
castor zinc finger 1
acts_upstream_of_or_within
ISO
MGI:3052661|MGI:4841554 (PMID:25654255)
RGD
PMID:25654255
NCBI chr 5:159,243,965...159,393,935
Ensembl chr 5:159,243,995...159,393,400
G
Cav1
caveolin 1
IMP
RGD
PMID:21826216 PMID:23031836
RGD:6784523 , RGD:8662269
NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705
G
Cd24
CD24 molecule
acts_upstream_of_or_within
ISO
MGI:2179996 (PMID:15737737)
RGD
PMID:15737737
NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662
G
Cdk5rap2
CDK5 regulatory subunit associated protein 2
involved_in
IEA ISO
GO_REF:0000107 (MGI:4454949|PMID:20471352)
Ensembl RGD
PMID:20471352
GO_REF:0000107 MGI:4454949
NCBI chr 5:83,792,282...83,961,129
Ensembl chr 5:83,792,284...83,960,782
G
Cntn2
contactin 2
acts_upstream_of_or_within
ISO
MGI:88059 (PMID:18278038)
RGD
PMID:18278038
NCBI chr13:43,942,868...43,975,973
Ensembl chr13:43,947,265...43,975,887
G
Cntn4
contactin 4
involved_in
ISS ISO
PMID:14571131 (PMID:14571131)
RGD
PMID:14571131 PMID:14571131
RGD:8553368
NCBI chr 4:138,624,584...139,622,499
Ensembl chr 4:139,099,152...139,621,090
G
Ctdsp1
CTD small phosphatase 1
acts_upstream_of_or_within
ISO
(PMID:17403776)
RGD
PMID:17403776
NCBI chr 9:75,973,694...75,979,298
Ensembl chr 9:75,973,962...75,979,297
G
Ddx6
DEAD-box helicase 6
acts_upstream_of_or_within
ISO
(PMID:25456498)
RGD
PMID:25456498
NCBI chr 8:44,931,127...44,967,773
Ensembl chr 8:44,931,974...44,964,405
G
Disp3
dispatched RND transporter family member 3
involved_in
ISO
(PMID:25281927)
RGD
PMID:25281927
NCBI chr 5:158,672,015...158,720,806
Ensembl chr 5:158,672,015...158,720,806
G
Dixdc1
DIX domain containing 1
involved_in
ISO IEA
(MGI:4821185|PMID:20624590) GO_REF:0000107
RGD Ensembl
PMID:20624590
GO_REF:0000107 MGI:4821185
NCBI chr 8:51,007,835...51,081,191
Ensembl chr 8:51,007,838...51,081,090
G
Dll1
delta like canonical Notch ligand 1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:1861919 (PMID:20081190) (MGI:3848562|PMID:19389377)
UniProt RGD
PMID:19389377 PMID:20081190
GO_REF:0000024 MGI:3848562
NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
G
Dmd
dystrophin
IMP
RGD
PMID:21668890
RGD:12902619
NCBI chr X:47,272,324...49,504,219
Ensembl chr X:47,272,331...49,504,207
G
Dtx1
deltex E3 ubiquitin ligase 1
involved_in
ISO
UniProtKB:Q01705 (PMID:11564735)
RGD
PMID:11564735
NCBI chr12:35,849,647...35,880,835
Ensembl chr12:35,849,617...35,880,838
G
Eif2ak4
eukaryotic translation initiation factor 2 alpha kinase 4
involved_in
ISO
(MGI:5494763|PMID:23447528)
RGD
PMID:23447528
MGI:5494763
NCBI chr 3:105,356,261...105,441,630
Ensembl chr 3:105,356,261...105,441,630
G
Eif4e
eukaryotic translation initiation factor 4E
acts_upstream_of_or_within
ISO
(PMID:25456498)
RGD
PMID:25456498
NCBI chr 2:227,066,519...227,099,261
Ensembl chr 2:227,066,673...227,098,683
G
Eif4enif1
eukaryotic translation initiation factor 4E nuclear import factor 1
acts_upstream_of_or_within
ISO
MGI:95305 (PMID:25456498)
RGD
PMID:25456498
NCBI chr14:78,056,115...78,099,846
Ensembl chr14:78,056,297...78,098,793
G
Fezf2
Fez family zinc finger 2
acts_upstream_of_or_within
ISO
(PMID:24997765)
RGD
PMID:24997765
NCBI chr15:12,768,614...12,777,554
Ensembl chr15:12,773,762...12,777,554
G
Fmr1
fragile X messenger ribonucleoprotein 1
IMP
RGD
PMID:24338128
RGD:11667958
NCBI chr X:147,240,239...147,278,057
Ensembl chr X:147,240,301...147,278,050
G
Foxa2
forkhead box A2
acts_upstream_of_or_within
ISO
MGI:1347476 (PMID:17922007)
RGD
PMID:17922007
NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326
G
Foxg1
forkhead box G1
acts_upstream_of_or_within
ISO
MGI:1857771|MGI:1932522 (PMID:12151532), (PMID:14704420), (PMID:7605629)
RGD
PMID:7605629 PMID:12151532 PMID:14704420
NCBI chr 6:66,674,797...66,677,611
Ensembl chr 6:66,666,587...66,678,607
G
Foxo3
forkhead box O3
IMP
RGD
PMID:23086522
RGD:10402193
NCBI chr20:45,669,708...45,764,606
Ensembl chr20:45,672,995...45,764,561
G
Fuom
fucose mutarotase
acts_upstream_of_or_within
ISO
MGI:5427618 (PMID:20609214)
RGD
PMID:20609214
NCBI chr 1:194,888,535...194,893,046
Ensembl chr 1:194,886,709...194,893,046
G
Gdf11
growth differentiation factor 11
acts_upstream_of_or_within
IMP ISO
(PMID:15976303)
RGD
PMID:15976303 PMID:15988002
RGD:2316479
NCBI chr 7:1,311,732...1,325,211
Ensembl chr 7:1,311,732...1,320,725
G
Gli3
GLI family zinc finger 3
acts_upstream_of_or_within
ISO
MGI:1856276 (PMID:19048639)
RGD
PMID:19048639
NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
G
Gpr37l1
G protein-coupled receptor 37-like 1
acts_upstream_of_or_within
ISO
MGI:5439169 (PMID:24062445)
RGD
PMID:24062445
NCBI chr13:46,598,574...46,605,421
Ensembl chr13:46,598,578...46,605,421
G
Hes1
hes family bHLH transcription factor 1
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:104876|MGI:2149672|MGI:97363 (PMID:10205173), (PMID:10952889), (PMID:15496443), (PMID:16038893), (PMID:18579678)
GO_Central RGD
PMID:10205173 PMID:10952889 PMID:15496443 PMID:16038893 PMID:18579678
GO_REF:0000033
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
G
Hes5
hes family bHLH transcription factor 5
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:104853|MGI:1859823|MGI:1920441|MGI:2149674|MGI:97363 (PMID:10205173), (PMID:15496443), (PMID:20431123)
UniProt RGD
PMID:10205173 PMID:15496443 PMID:20431123
GO_REF:0000024
NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001
G
Hey1
hes-related family bHLH transcription factor with YRPW motif 1
involved_in
ISO
(MGI:4365702|PMID:19631204)
RGD
PMID:19631204
MGI:4365702
NCBI chr 2:93,096,605...93,100,316
Ensembl chr 2:93,095,498...93,100,312
G
Hmg20a
high mobility group 20A
acts_upstream_of_or_within
ISO
MGI:1341190 (PMID:22570500)
RGD
PMID:22570500
NCBI chr 8:56,819,673...56,895,658
Ensembl chr 8:56,819,659...56,895,656
G
Hoxa2
homeobox A2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:104717|MGI:1857530|MGI:96207|MGI:97495 (PMID:18164701)
Ensembl RGD
PMID:18164701
GO_REF:0000107
NCBI chr 4:81,262,668...81,266,970
Ensembl chr 4:81,262,768...81,265,044
G
Id4
inhibitor of DNA binding 4
acts_upstream_of_or_within
ISO
MGI:3579084 (PMID:15882580)
RGD
PMID:15882580
NCBI chr17:16,389,387...16,391,956
Ensembl chr17:16,389,387...16,392,470
G
Il1b
interleukin 1 beta
IDA
RGD
PMID:22270046
RGD:6482669
NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
G
Irx3
iroquois homeobox 3
acts_upstream_of_or_within
ISO
(PMID:10830170)
RGD
PMID:10830170
NCBI chr19:15,211,882...15,215,317
Ensembl chr19:15,211,878...15,215,317
G
Isl1
ISL LIM homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:109156 (PMID:14766174)
Ensembl RGD
PMID:14766174
GO_REF:0000107
NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584
G
Isl2
ISL LIM homeobox 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:101791|MGI:3046260 (PMID:14766174)
Ensembl RGD
PMID:14766174
GO_REF:0000107
NCBI chr 8:55,923,805...55,928,790
Ensembl chr 8:55,923,805...55,928,790
G
Itgb1
integrin subunit beta 1
acts_upstream_of_or_within involved_in
IMP ISO IEA
MGI:2156945 (PMID:15056720) GO_REF:0000107
RGD Ensembl
PMID:15056720 PMID:18658130
GO_REF:0000107, RGD:2325684
NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
G
Jag1
jagged canonical Notch ligand 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:4420947 (PMID:15064243), (PMID:20081190)
Ensembl RGD
PMID:15064243 PMID:20081190
GO_REF:0000107
NCBI chr 3:124,406,783...124,442,220
Ensembl chr 3:124,406,794...124,442,209
G
Lmx1a
LIM homeobox transcription factor 1 alpha
acts_upstream_of_or_within
ISO
MGI:1888413 (PMID:15148302)
RGD
PMID:15148302
NCBI chr13:79,834,614...79,978,253
Ensembl chr13:79,835,019...79,978,253
G
Lsm1
LSM1 homolog, mRNA degradation associated
acts_upstream_of_or_within
ISO
(PMID:25456498)
RGD
PMID:25456498
NCBI chr16:66,277,345...66,288,852
Ensembl chr16:66,277,345...66,288,852
G
Mag
myelin-associated glycoprotein
IDA
RGD
PMID:19349915
RGD:9685287
NCBI chr 1:86,148,227...86,163,726
Ensembl chr 1:86,148,228...86,163,656
G
Med1
mediator complex subunit 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:5297786|PMID:16723356)
UniProt RGD
PMID:16723356
GO_REF:0000024 MGI:5297786
NCBI chr10:83,145,538...83,189,260
Ensembl chr10:83,145,568...83,189,299
G
Meis1
Meis homeobox 1
acts_upstream_of_or_within
ISO
MGI:96174|MGI:97495 (PMID:18164701)
RGD
PMID:18164701
NCBI chr14:93,155,426...93,294,373
Ensembl chr14:93,155,419...93,294,265
G
Mib1
MIB E3 ubiquitin protein ligase 1
acts_upstream_of_or_within
ISO
MGI:3603514 (PMID:16000382)
RGD
PMID:16000382
NCBI chr18:1,802,519...1,926,988
Ensembl chr18:1,802,519...1,920,689
G
Nbn
nibrin
IMP
RGD
PMID:17442057
RGD:2298997
NCBI chr 5:29,459,574...29,494,152
Ensembl chr 5:29,459,457...29,494,150
G
Nepro
nucleolus and neural progenitor protein
acts_upstream_of_or_within
ISO
(PMID:19906856)
RGD
PMID:19906856
NCBI chr11:55,958,265...55,970,432
Ensembl chr11:55,958,267...55,970,432
G
Nkx2-2
NK2 homeobox 2
acts_upstream_of_or_within
ISO
MGI:1932100 (PMID:10217145), (PMID:10830170)
RGD
PMID:10217145 PMID:10830170
NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411
G
Notch1
notch receptor 1
acts_upstream_of_or_within
IMP ISO
MGI:104853|MGI:104876|MGI:1932522|MGI:1933835 (PMID:10205173), (PMID:15064243), (PMID:16120638)
RGD
PMID:10205173 PMID:15064243 PMID:16120638 PMID:19109527
RGD:2325303
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Notch3
notch receptor 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:15064243)
Ensembl RGD
PMID:15064243
GO_REF:0000107
NCBI chr 7:11,132,984...11,184,025
Ensembl chr 7:11,133,706...11,184,025
G
Nr2e1
nuclear receptor subfamily 2, group E, member 1
acts_upstream_of_or_within
ISO
MGI:2151350|MGI:2176560 (PMID:12527005), (PMID:14702088), (PMID:16702404), (PMID:17901127)
RGD
PMID:12527005 PMID:14702088 PMID:16702404 PMID:17901127
NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949
G
Olig2
oligodendrocyte transcription factor 2
acts_upstream_of_or_within
ISO
(PMID:11566099)
RGD
PMID:11566099
NCBI chr11:30,475,510...30,478,886
Ensembl chr11:30,475,398...30,480,152
G
Pax6
paired box 6
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:95728 (PMID:16950124)
Ensembl RGD
PMID:16950124
GO_REF:0000107
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
G
Pbx1
PBX homeobox 1
acts_upstream_of_or_within
ISO
MGI:104717|MGI:96174 (PMID:18164701)
RGD
PMID:18164701
NCBI chr13:80,278,766...80,588,563
Ensembl chr13:80,278,770...80,588,594
G
Phox2b
paired-like homeobox 2b
acts_upstream_of_or_within
ISO
MGI:1100882 (PMID:17922007)
RGD
PMID:17922007
NCBI chr14:41,066,012...41,069,202
Ensembl chr14:41,066,264...41,068,978
G
Ptbp1
polypyrimidine tract binding protein 1
involved_in
ISO
(MGI:6271441|PMID:17679093)
RGD
PMID:17679093
MGI:6271441
NCBI chr 7:9,842,574...9,852,332
Ensembl chr 7:9,842,574...9,852,397
G
Rap1gap
Rap1 GTPase-activating protein
IMP
RGD
PMID:20877310
RGD:9835042
NCBI chr 5:149,873,987...149,939,254
Ensembl chr 5:149,892,019...149,939,253
G
Rest
RE1-silencing transcription factor
involved_in
IMP IEA IBA ISO ISS
GO_REF:0000118 GO_REF:0000033 GO_REF:0000107 (MGI:3580760|PMID:15907476), (MGI:5906102|PMID:27819263) (PMID:18570921), (PMID:21258371) GO_REF:0000024
TreeGrafter GO_Central Ensembl RGD UniProt
PMID:15907476 PMID:18570921 PMID:21258371 PMID:27819263 PMID:12657670
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:3580760 MGI:5906102 , RGD:1299303
NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354
G
Rhoa
ras homolog family member A
IMP
RGD
PMID:14517206
RGD:1299270
NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
G
Rtn4
reticulon 4
IDA
RGD
PMID:19379790
RGD:2314929
NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686
G
Shh
sonic hedgehog signaling molecule
acts_upstream_of_or_within
ISO
MGI:1934268|MGI:3052661 (PMID:15337776), (PMID:16236765)
RGD
PMID:15337776 PMID:16236765
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Shoc2
SHOC2 leucine-rich repeat scaffold protein
IMP
RGD
PMID:21732489
RGD:155804271
NCBI chr 1:252,958,939...253,048,820
Ensembl chr 1:252,959,723...253,047,337
G
Six3
SIX homeobox 3
involved_in
ISO
(MGI:5582170|PMID:17576749)
RGD
PMID:17576749
MGI:5582170
NCBI chr 6:9,039,017...9,043,336
Ensembl chr 6:9,036,434...9,053,301
G
Slc6a4
solute carrier family 6 member 4
IMP
RGD
PMID:18573488
RGD:4889489
NCBI chr10:61,824,208...61,858,924
Ensembl chr10:61,826,123...61,858,384
G
Sox2
SRY-box transcription factor 2
acts_upstream_of_or_within
ISO
(PMID:16631155)
RGD
PMID:16631155
NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338
G
Spag9
sperm associated antigen 9
IMP
RGD
PMID:19959466
RGD:30296662
NCBI chr10:78,943,439...79,077,797
Ensembl chr10:78,943,479...79,077,797
G
Tlx3
T-cell leukemia, homeobox 3
acts_upstream_of_or_within
ISO
MGI:104867 (PMID:16234809)
RGD
PMID:16234809
NCBI chr10:17,789,706...17,792,207
Ensembl chr10:17,790,053...17,792,207
G
Tp73
tumor protein p73
IMP
RGD
PMID:17353261
RGD:2291838
NCBI chr 5:164,621,377...164,703,958
Ensembl chr 5:164,621,377...164,681,128
G
Ttc3
tetratricopeptide repeat domain 3
involved_in
ISO
(PMID:17488780)
RGD
PMID:17488780
NCBI chr11:33,689,119...33,788,976
Ensembl chr11:33,688,952...33,788,975
G
Tunar
TCL1 upstream neural differentiation-associated RNA
involved_in
ISO
(MGI:6857012|PMID:35036403)
RGD
PMID:35036403
MGI:6857012
NCBI chr 6:124,245,949...124,293,440
G
Zfp536
zinc finger protein 536
acts_upstream_of_or_within
ISO
(PMID:19398580)
RGD
PMID:19398580
NCBI chr 1:90,000,359...90,463,423
Ensembl chr 1:90,002,858...90,462,990
G
Zhx2
zinc fingers and homeoboxes 2
acts_upstream_of_or_within
ISO
(PMID:19515908)
RGD
PMID:19515908
NCBI chr 7:89,226,358...89,374,266
Ensembl chr 7:89,226,463...89,374,378
G
Ednrb
endothelin receptor type B
involved_in
ISO
(MGI:1330409|PMID:10021336)
RGD
PMID:10021336
MGI:1330409
NCBI chr15:80,640,839...80,672,115
Ensembl chr15:80,643,043...80,672,115
G
Gsk3b
glycogen synthase kinase 3 beta
acts_upstream_of_or_within
ISO
MGI:102539|MGI:1934030|MGI:97321 (PMID:23015435)
RGD
PMID:23015435
NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
G
Mir133b
microRNA 133b
acts_upstream_of_or_within
ISO
(PMID:17656374)
RGD
PMID:17656374
NCBI chr 9:23,098,134...23,098,217
Ensembl chr 9:23,098,134...23,098,217
G
Nox1
NADPH oxidase 1
IMP
RGD
PMID:25617620
RGD:329955357
NCBI chr X:97,279,058...97,332,291
Ensembl chr X:97,279,056...97,302,236
G
Tbx6
T-box transcription factor 6
acts_upstream_of_or_within
ISO
MGI:1934030|MGI:2152453|MGI:97321 (PMID:23015435)
RGD
PMID:23015435
NCBI chr 1:181,387,851...181,392,762
Ensembl chr 1:181,388,684...181,392,593
G
Bcl11a
BCL11 transcription factor A
IMP
RGD
PMID:19616629
RGD:11100018
NCBI chr14:98,029,018...98,124,181
Ensembl chr14:98,030,461...98,124,180
G
Inpp5d
inositol polyphosphate-5-phosphatase D
involved_in acts_upstream_of_or_within
IEA ISO IBA
GO_REF:0000107 MGI:2386884 (PMID:9620849) GO_REF:0000033
Ensembl RGD GO_Central
PMID:9620849
GO_REF:0000033 GO_REF:0000107
NCBI chr 9:88,287,680...88,392,748
Ensembl chr 9:88,287,677...88,392,746
G
Sh2d1b2
SH2 domain containing 1B2
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
NCBI chr13:82,437,418...82,461,511
Ensembl chr13:82,437,428...82,461,509
G
Trib1
tribbles pseudokinase 1
involved_in
ISO
(MGI:5488531|PMID:23515163)
RGD
PMID:23515163
MGI:5488531
NCBI chr 7:91,206,579...91,213,126
Ensembl chr 7:91,206,579...91,214,731
G
Msx1
msh homeobox 1
involved_in
ISO
(MGI:7539469|PMID:29148101), (MGI:7539470|PMID:24028588)
RGD
PMID:24028588 PMID:29148101
MGI:7539469 MGI:7539470
NCBI chr14:72,961,036...72,964,970
Ensembl chr14:72,961,148...72,964,966
G
Bmp4
bone morphogenetic protein 4
IMP
RGD
PMID:16388796 PMID:22710965
RGD:2289009 , RGD:9068402
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Ctnnb1
catenin beta 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1858008 (PMID:19503085)
Ensembl RGD
PMID:19503085
GO_REF:0000107
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
G
Daam2
dishevelled associated activator of morphogenesis 2
involved_in
ISO IBA
(MGI:5638274|PMID:25754822) GO_REF:0000033
RGD GO_Central
PMID:25754822
GO_REF:0000033 MGI:5638274
NCBI chr 9:11,428,913...11,546,982
Ensembl chr 9:11,428,724...11,545,497
G
Dlx1
distal-less homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:94902 (PMID:17678855), (PMID:23042297)
Ensembl RGD
PMID:17678855 PMID:23042297
GO_REF:0000107
NCBI chr 3:56,356,190...56,360,780
Ensembl chr 3:56,356,190...56,360,780
G
Dlx2
distal-less homeobox 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:94901 (PMID:17678855), (PMID:23042297)
Ensembl RGD
PMID:17678855 PMID:23042297
GO_REF:0000107
NCBI chr 3:56,370,238...56,373,581
Ensembl chr 3:56,370,483...56,373,597
G
Drd3
dopamine receptor D3
acts_upstream_of_or_within
ISO
(PMID:9651217)
RGD
PMID:9651217
NCBI chr11:56,879,689...56,931,901
Ensembl chr11:56,879,689...56,940,596
G
Dusp10
dual specificity phosphatase 10
IMP
RGD
PMID:19139271
RGD:7775012
NCBI chr13:95,613,716...95,651,716
Ensembl chr13:95,614,292...95,651,716
G
Hes1
hes family bHLH transcription factor 1
involved_in
IMP ISO ISS IEA
(MGI:2655020|PMID:12666205) GO_REF:0000024 GO_REF:0000107
RGD UniProt Ensembl
PMID:12666205 PMID:12666205
GO_REF:0000024 GO_REF:0000107 MGI:2655020 , RGD:9685388
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
G
Hes5
hes family bHLH transcription factor 5
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:2149674 (PMID:17006542) (MGI:2655020|PMID:12666205)
UniProt RGD
PMID:12666205 PMID:17006542
GO_REF:0000024 MGI:2655020
NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001
G
Id2
inhibitor of DNA binding 2
acts_upstream_of_or_within
ISO
MGI:2384134 (PMID:11301021)
RGD
PMID:11301021
NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400
G
Id4
inhibitor of DNA binding 4
acts_upstream_of_or_within
ISO
MGI:3579084 (PMID:16862533)
RGD
PMID:16862533
NCBI chr17:16,389,387...16,391,956
Ensembl chr17:16,389,387...16,392,470
G
Lingo1
leucine rich repeat and Ig domain containing 1
acts_upstream_of_or_within
ISO
(PMID:15895088)
RGD
PMID:15895088
NCBI chr 8:57,011,272...57,193,496
Ensembl chr 8:57,010,007...57,196,544
G
Nf1
neurofibromin 1
involved_in acts_upstream_of_or_within
IEA ISO ISS
GO_REF:0000107 MGI:1857444 (PMID:15944386) GO_REF:0000024
Ensembl RGD HGNC-UCL
PMID:15944386
GO_REF:0000024 GO_REF:0000107
NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658
G
Nkx6-1
NK6 homeobox 1
acts_upstream_of_or_within
ISO
MGI:1352738 (PMID:15629702)
RGD
PMID:15629702
NCBI chr14:7,969,756...7,976,689
Ensembl chr14:7,969,756...7,976,681
G
Nkx6-2
NK6 homeobox 2
acts_upstream_of_or_within
ISO
MGI:1206039 (PMID:15629702)
RGD
PMID:15629702
NCBI chr 1:194,380,149...194,383,533
Ensembl chr 1:194,381,975...194,383,515
G
Notch1
notch receptor 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:2655020|PMID:12666205)
UniProt RGD
PMID:12666205
GO_REF:0000024 MGI:2655020
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Sirt2
sirtuin 2
IMP
RGD
PMID:17344398
RGD:8553877
NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975
G
Tmem98
transmembrane protein 98
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:6258499|PMID:30249802)
UniProt Ensembl RGD
PMID:30249802
GO_REF:0000024 GO_REF:0000107 MGI:6258499
NCBI chr10:65,796,173...65,807,082
Ensembl chr10:65,796,145...65,807,079
G
Sirt2
sirtuin 2
involved_in
IMP
PMID:17344398
UniProt
PMID:17344398
RGD:8553877
NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975
G
Igf1
insulin-like growth factor 1
involved_in
ISO IEA
(PMID:21543511) GO_REF:0000107
RGD Ensembl
PMID:21543511
GO_REF:0000107
NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
G
Wee2
WEE2 oocyte meiosis inhibiting kinase
involved_in
ISO
(PMID:19633431), (PMID:21123961)
RGD
PMID:19633431 PMID:21123961
NCBI chr 4:69,239,043...69,261,576
Ensembl chr 4:69,239,299...69,261,093
G
Gpr3
G protein-coupled receptor 3
involved_in
ISO
(PMID:22685609)
RGD
PMID:22685609
NCBI chr 5:145,411,500...145,414,621
Ensembl chr 5:145,411,510...145,414,590
G
Nppc
natriuretic peptide C
acts_upstream_of_or_within
ISO
(PMID:20947764) MGI:2388899 (PMID:20947764)
RGD
PMID:20947764
NCBI chr 9:87,320,051...87,324,251
Ensembl chr 9:87,320,051...87,324,251
G
Npr2
natriuretic peptide receptor 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2152891 (PMID:20947764)
Ensembl RGD
PMID:20947764
GO_REF:0000107
NCBI chr 5:57,883,171...57,901,590
Ensembl chr 5:57,883,171...57,901,580
G
Shb
SH2 domain containing adaptor protein B
acts_upstream_of_or_within
ISO
MGI:3721903 (PMID:20585392)
RGD
PMID:20585392
NCBI chr 5:59,678,066...59,785,443
Ensembl chr 5:59,678,216...59,785,538
G
Wee2
WEE2 oocyte meiosis inhibiting kinase
involved_in
ISO
(MGI:3604224|PMID:16169490), (MGI:4948986|PMID:21454751)
RGD
PMID:16169490 PMID:21454751
MGI:3604224 MGI:4948986
NCBI chr 4:69,239,043...69,261,576
Ensembl chr 4:69,239,299...69,261,093
G
Ahr
aryl hydrocarbon receptor
IDA
RGD
PMID:12193573
RGD:625678
NCBI chr 6:52,234,089...52,271,568
Ensembl chr 6:52,234,089...52,271,568
G
Areg
amphiregulin
IDA
RGD
PMID:15509566
RGD:1578718
NCBI chr14:16,972,185...16,981,443
Ensembl chr14:16,972,187...16,981,535
G
Axin2
axin 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3579503 (PMID:15790973)
Ensembl RGD
PMID:15790973
GO_REF:0000107
NCBI chr10:93,893,830...93,927,042
Ensembl chr10:93,899,245...93,926,231
G
Bambi
BMP and activin membrane-bound inhibitor
acts_upstream_of
ISO
(PMID:21042576), (PMID:21743293)
RGD
PMID:21042576 PMID:21743293
NCBI chr17:54,121,251...54,125,816
Ensembl chr17:54,121,255...54,126,060
G
Cdk6
cyclin-dependent kinase 6
involved_in
ISO
(PMID:15254224)
RGD
PMID:15254224
NCBI chr 4:30,637,650...30,829,688
Ensembl chr 4:30,646,460...30,829,634
G
Chrd
chordin
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:15780974) (PMID:18533030)
Ensembl RGD
PMID:15780974 PMID:18533030
GO_REF:0000107
NCBI chr11:80,171,994...80,181,166
Ensembl chr11:80,171,994...80,180,673
G
Cited1
Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1
involved_in
ISO
(MGI:4410428|PMID:18187554)
RGD
PMID:18187554
MGI:4410428
NCBI chr X:67,350,376...67,355,072
Ensembl chr X:67,350,373...67,355,162
G
Crim1
cysteine rich transmembrane BMP regulator 1
acts_upstream_of
ISO
(PMID:21042576), (PMID:21743293)
RGD
PMID:21042576 PMID:21743293
NCBI chr 6:16,695,864...16,870,264
Ensembl chr 6:16,697,829...16,870,259
G
Erfe
erythroferrone
involved_in
ISS ISO
GO_REF:0000024 (MGI:6712200|PMID:34002695)
UniProt RGD
PMID:34002695
GO_REF:0000024 MGI:6712200
NCBI chr 9:91,956,971...91,964,846
Ensembl chr 9:91,956,977...91,964,846
G
Fgf23
fibroblast growth factor 23
involved_in
ISO
(PMID:18282132)
RGD
PMID:18282132
NCBI chr 4:159,914,267...159,923,821
Ensembl chr 4:159,914,272...159,923,821
G
Fgfr1
Fibroblast growth factor receptor 1
IMP
RGD
PMID:18690792
RGD:2325179
NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350
G
Fndc3b
fibronectin type III domain containing 3B
acts_upstream_of_or_within
ISO
MGI:4822558 (PMID:20493170)
RGD
PMID:20493170
NCBI chr 2:110,311,439...110,617,504
Ensembl chr 2:110,312,694...110,547,830
G
Grem1
gremlin 1, DAN family BMP antagonist
involved_in acts_upstream_of_or_within
ISO ISS IMP
(PMID:27036124) GO_REF:0000024 PMID:27910957
RGD UniProt
PMID:27036124 PMID:27910957
GO_REF:0000024, RGD:38501075
NCBI chr 3:100,512,317...100,524,001
Ensembl chr 3:100,512,313...100,524,082
G
Gsk3b
glycogen synthase kinase 3 beta
involved_in
IEA ISO
GO_REF:0000107 (PMID:24023731)
Ensembl RGD
PMID:24023731
GO_REF:0000107
NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
G
Hand2
heart and neural crest derivatives expressed 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2653307 (PMID:19144722)
Ensembl RGD
PMID:19144722
GO_REF:0000107
NCBI chr16:32,917,448...32,920,791
Ensembl chr16:32,917,823...32,919,891
G
Hdac4
histone deacetylase 4
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:15990875)
Ensembl RGD
PMID:15990875
GO_REF:0000107
NCBI chr 9:92,503,467...92,750,164
Ensembl chr 9:92,507,611...92,750,164
G
Hdac5
histone deacetylase 5
acts_upstream_of_or_within
ISO
(PMID:15990875)
RGD
PMID:15990875
NCBI chr10:87,152,978...87,187,921
Ensembl chr10:87,152,978...87,188,235
G
Hdac7
histone deacetylase 7
involved_in
ISO IEA
(PMID:17997710) GO_REF:0000107
RGD Ensembl
PMID:17997710
GO_REF:0000107
NCBI chr 7:128,923,918...128,961,926
Ensembl chr 7:128,923,920...128,962,072
G
Hdac8
histone deacetylase 8
IMP
RGD
PMID:25019367
RGD:13208813
NCBI chr X:67,385,288...67,593,014
Ensembl chr X:67,385,289...67,592,923
G
Hoxa2
homeobox A2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:21324897)
Ensembl RGD
PMID:21324897
GO_REF:0000107
NCBI chr 4:81,262,668...81,266,970
Ensembl chr 4:81,262,768...81,265,044
G
Id1
inhibitor of DNA binding 1
acts_upstream_of_or_within
ISO
MGI:1321394 (PMID:15161906)
RGD
PMID:15161906
NCBI chr 3:141,210,666...141,212,420
Ensembl chr 3:141,211,267...141,212,419
G
Id2
inhibitor of DNA binding 2
acts_upstream_of_or_within
ISO
MGI:1321394 (PMID:15246553)
RGD
PMID:15246553
NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400
G
Id3
inhibitor of DNA binding 3
acts_upstream_of_or_within
ISO
MGI:1321394 (PMID:15161906)
RGD
PMID:15161906
NCBI chr 5:148,372,784...148,374,353
Ensembl chr 5:148,372,762...148,374,349
G
Igfbp5
insulin-like growth factor binding protein 5
acts_upstream_of_or_within
ISO
MGI:87986|MGI:88177 (PMID:19208758)
RGD
PMID:19208758
NCBI chr 9:74,452,371...74,464,953
Ensembl chr 9:74,448,382...74,465,156
G
Ipo7
importin 7
involved_in
ISO
(MGI:7510301|PMID:35922041)
RGD
PMID:35922041
MGI:7510301
NCBI chr 1:164,062,702...164,102,938
Ensembl chr 1:164,062,702...164,102,938
G
Limd1
LIM domain containing 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:3807091|PMID:18657804)
UniProt RGD
PMID:18657804
GO_REF:0000024 MGI:3807091
NCBI chr 8:123,121,363...123,168,476
Ensembl chr 8:123,122,460...123,167,714
G
Lrp5
LDL receptor related protein 5
involved_in
ISO
(PMID:17680723)
RGD
PMID:17680723
NCBI chr 1:200,814,247...200,917,581
Ensembl chr 1:200,814,250...200,917,581
G
Men1
menin 1
acts_upstream_of_or_within involved_in
ISO IEA
MGI:1316736 (PMID:15563473) MGI:96648 (PMID:15150273), (PMID:15563473) GO_REF:0000107
RGD Ensembl
PMID:15150273 PMID:15563473
GO_REF:0000107
NCBI chr 1:203,638,905...203,644,871
Ensembl chr 1:203,639,000...203,644,871
G
Mir100
microRNA 100
acts_upstream_of
ISO
(PMID:22684006)
RGD
PMID:22684006
NCBI chr 8:41,901,225...41,901,304
Ensembl chr 8:41,901,225...41,901,304
G
Mir106a
microRNA 106a
acts_upstream_of_or_within
ISO
(PMID:23399447)
RGD
PMID:23399447
NCBI chr X:132,422,584...132,422,661
Ensembl chr X:132,422,584...132,422,661
G
Mir125a
microRNA 125a
IMP
RGD
PMID:29319166
RGD:26884461
NCBI chr 1:58,677,626...58,677,710
Ensembl chr 1:58,677,626...58,677,710
G
Mir125b1
microRNA 125b-1
acts_upstream_of
ISO
(PMID:28214897)
RGD
PMID:28214897
NCBI chr 8:41,952,966...41,953,052
Ensembl chr 8:41,952,966...41,953,052
G
Mir125b2
microRNA 125b-2
acts_upstream_of
ISO
(PMID:28214897)
RGD
PMID:28214897
NCBI chr11:16,245,620...16,245,707
G
Mir133a1
microRNA 133a-1
acts_upstream_of_or_within
ISO
(PMID:21628588)
RGD
PMID:21628588
NCBI chr18:1,885,082...1,885,168
G
Mir137
microRNA 137
acts_upstream_of_or_within
ISO
(PMID:21628588)
RGD
PMID:21628588
NCBI chr 2:206,480,881...206,480,982
Ensembl chr 2:206,480,884...206,480,985
G
Mir138-1
microRNA 138-1
involved_in
ISO
(PMID:21444814)
RGD
PMID:21444814
NCBI chr 8:122,300,966...122,301,064
Ensembl chr 8:122,300,966...122,301,064
G
Mir138-2
microRNA 138-2
involved_in
ISO
(PMID:21444814)
RGD
PMID:21444814
NCBI chr19:10,674,193...10,674,274
Ensembl chr19:10,674,193...10,674,274
G
Mir140
microRNA 140
acts_upstream_of
ISO
UniProtKB:P12643 (PMID:24928442)
RGD
PMID:24928442
NCBI chr19:35,465,577...35,465,675
Ensembl chr19:35,465,577...35,465,675
G
Mir17
microRNA 17
acts_upstream_of_or_within
ISO
UniProtKB:P12643 (PMID:23399447)
RGD
PMID:23399447
NCBI chr15:92,180,629...92,180,712
Ensembl chr15:92,180,629...92,180,712
G
Mir18a
microRNA 18a
involved_in
ISO
(PMID:34937502)
RGD
PMID:34937502
NCBI chr15:92,180,765...92,180,860
Ensembl chr15:92,180,765...92,180,860
G
Mir204
microRNA 204
acts_upstream_of_or_within
IMP ISO
(PMID:21628588)
RGD
PMID:21628588 PMID:29319166
RGD:26884461
NCBI chr 1:220,316,931...220,317,040
Ensembl chr 1:220,316,931...220,317,040
G
Mir205
microRNA 205
acts_upstream_of acts_upstream_of_or_within
ISO
UniProtKB:Q13950|UniProtKB:Q15797 (PMID:25012146) (PMID:21628588)
RGD
PMID:21628588 PMID:25012146
NCBI chr13:105,035,878...105,035,985
Ensembl chr13:105,035,878...105,035,985
G
Mir214
microRNA 214
acts_upstream_of acts_upstream_of_or_within
ISO
(PMID:30703347) (PMID:20534588)
RGD
PMID:20534588 PMID:30703347
NCBI chr13:74,588,374...74,588,481
Ensembl chr13:74,588,372...74,588,481
G
Mir217
microRNA 217
acts_upstream_of_or_within
ISO
(PMID:21628588)
RGD
PMID:21628588
NCBI chr14:102,531,505...102,531,609
Ensembl chr14:102,531,505...102,531,609
G
Mir221
microRNA 221
IMP
RGD
PMID:32194220
RGD:152025220
NCBI chr X:3,429,465...3,429,573
Ensembl chr X:3,429,465...3,429,573
G
Mir222
microRNA 222
IMP
RGD
PMID:32194220
RGD:152025220
NCBI chr X:3,428,904...3,429,006
Ensembl chr X:3,428,904...3,429,006
G
Mir23a
microRNA 23a
acts_upstream_of_or_within
ISO
(PMID:21628588)
RGD
PMID:21628588
NCBI chr19:23,954,997...23,955,071
Ensembl chr19:23,954,997...23,955,071
G
Mir24-2
microRNA 24-2
involved_in
ISO
(PMID:30378100)
RGD
PMID:30378100
NCBI chr19:23,954,683...23,954,790
Ensembl chr19:23,954,683...23,954,790
G
Mir30b
microRNA 30b
involved_in
ISO
(PMID:23968872)
RGD
PMID:23968872
NCBI chr 7:100,132,589...100,132,675
Ensembl chr 7:100,132,589...100,132,675
G
Mir30c1
microRNA 30c-1
acts_upstream_of_or_within
ISO
(PMID:21628588)
RGD
PMID:21628588
NCBI chr 5:134,349,237...134,349,325
Ensembl chr 5:134,349,237...134,349,325
G
Mir30c2
microRNA 30c-2
acts_upstream_of_or_within
ISO
(PMID:21628588)
RGD
PMID:21628588
NCBI chr 9:25,757,342...25,757,425
Ensembl chr 9:25,757,342...25,757,425
G
Mir320a
microRNA 320a
involved_in
ISO
(PMID:32271402)
RGD
PMID:32271402
NCBI chr15:45,516,392...45,516,473
Ensembl chr15:45,516,392...45,516,473
G
Mir3582
microRNA 3582
acts_upstream_of_or_within
ISO
(PMID:21628588)
RGD
PMID:21628588
NCBI chr18:1,885,063...1,885,180
Ensembl chr18:1,885,063...1,885,180
G
Mir665
microRNA 665
acts_upstream_of
ISO
(PMID:30545407)
RGD
PMID:30545407
NCBI chr 6:128,539,440...128,539,533
Ensembl chr 6:128,539,440...128,539,533
G
Mir93
microRNA 93
acts_upstream_of
ISO
(PMID:28797104)
RGD
PMID:28797104
NCBI chr12:17,043,135...17,043,221
Ensembl chr12:17,043,135...17,043,221
G
Mir98
microRNA 98
acts_upstream_of_or_within
ISO
(PMID:27860183)
RGD
PMID:27860183
NCBI chr X:20,981,235...20,981,342
Ensembl chr X:20,981,235...20,981,342
G
Nbr1
NBR1, autophagy cargo receptor
involved_in
IEA ISO
GO_REF:0000107 (MGI:4818844|PMID:20616007)
Ensembl RGD
PMID:20616007
GO_REF:0000107 MGI:4818844
NCBI chr10:86,477,775...86,506,418
Ensembl chr10:86,478,290...86,506,412
G
Nfatc1
nuclear factor of activated T-cells 1
acts_upstream_of_or_within
ISO
(PMID:19463978)
RGD
PMID:19463978
NCBI chr18:74,046,422...74,156,041
Ensembl chr18:74,046,904...74,156,028
G
Noct
nocturnin
involved_in
ISS ISO
GO_REF:0000024 (MGI:4457955|PMID:20498072)
UniProt RGD
PMID:20498072
GO_REF:0000024 MGI:4457955
NCBI chr 2:135,271,189...135,291,407
Ensembl chr 2:135,271,189...135,291,400
G
Nog
noggin
involved_in
IEA ISO
GO_REF:0000107 (PMID:20675382)
Ensembl RGD
PMID:20675382
GO_REF:0000107
NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
G
Notch1
notch receptor 1
involved_in
ISO
(MGI:4412151|PMID:19695258)
RGD
PMID:19695258
MGI:4412151
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Ostn
osteocrin
acts_upstream_of_or_within
ISO
(PMID:14523025)
RGD
PMID:14523025
NCBI chr11:73,442,167...73,478,498
Ensembl chr11:73,442,487...73,468,603
G
Pparg
peroxisome proliferator-activated receptor gamma
acts_upstream_of
ISO
(PMID:21042576), (PMID:21743293)
RGD
PMID:21042576 PMID:21743293
NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
G
Ptch1
patched 1
involved_in
ISO
(PMID:16229683)
RGD
PMID:16229683
NCBI chr17:1,542,705...1,607,730
Ensembl chr17:1,542,877...1,607,333
G
Ranbp3l
RAN binding protein 3-like
involved_in
ISO
(MGI:5883200|PMID:25755279)
RGD
PMID:25755279
MGI:5883200
NCBI chr 2:58,057,887...58,113,158
Ensembl chr 2:58,058,263...58,113,172
G
Riox1
ribosomal oxygenase 1
involved_in
ISO
(MGI:4418587|PMID:19927124)
RGD
PMID:19927124
MGI:4418587
NCBI chr 6:103,579,642...103,582,260
Ensembl chr 6:103,579,642...103,582,250
G
Rorb
RAR-related orphan receptor B
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:5554363|PMID:22189870) GO_REF:0000024
Ensembl RGD UniProt
PMID:22189870
GO_REF:0000024 GO_REF:0000107 MGI:5554363
NCBI chr 1:216,363,629...216,544,390
Ensembl chr 1:216,363,629...216,544,390
G
Sema4d
semaphorin 4D
involved_in
ISO
(MGI:5297297|PMID:22019888)
RGD
PMID:22019888
MGI:5297297
NCBI chr17:13,430,324...13,537,146
Ensembl chr17:13,430,379...13,537,138
G
Sfrp1
secreted frizzled-related protein 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3045799 (PMID:14976225)
Ensembl RGD
PMID:14976225
GO_REF:0000107
NCBI chr16:68,575,763...68,614,180
Ensembl chr16:68,575,763...68,614,286
G
Ski
Ski proto-oncogene
involved_in
ISO
(PMID:14699069)
RGD
PMID:14699069
NCBI chr 5:165,713,525...165,782,134
Ensembl chr 5:165,714,093...165,782,733
G
Smad3
SMAD family member 3
acts_upstream_of_or_within
ISO
MGI:1316736 (PMID:15150273)
RGD
PMID:15150273
NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960
G
Smad6
SMAD family member 6
involved_in
ISO
(PMID:22275001)
RGD
PMID:22275001
NCBI chr 8:64,450,114...64,519,673
Ensembl chr 8:64,450,114...64,519,763
G
Sox2
SRY-box transcription factor 2
acts_upstream_of_or_within
ISO
(PMID:15781477)
RGD
PMID:15781477
NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338
G
Sox9
SRY-box transcription factor 9
involved_in
ISS ISO
GO_REF:0000024 (MGI:5317468|PMID:22421045), (MGI:6323929|PMID:31121357), (MGI:6414737|PMID:32103177)
UniProt RGD
PMID:22421045 PMID:31121357 PMID:32103177
GO_REF:0000024 MGI:5317468 MGI:6323929 MGI:6414737
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
G
Tmem53
transmembrane protein 53
involved_in
ISO
(MGI:6713651|PMID:33824347)
RGD
PMID:33824347
MGI:6713651
NCBI chr 5:130,721,780...130,737,692
Ensembl chr 5:130,721,659...130,737,692
G
Tmem64
transmembrane protein 64
involved_in
ISO
(MGI:5643786|PMID:25979161)
RGD
PMID:25979161
MGI:5643786
NCBI chr 5:28,698,947...28,745,384
Ensembl chr 5:28,698,918...28,745,330
G
Tnf
tumor necrosis factor
involved_in
ISO
(MGI:5285024|PMID:21689636)
RGD
PMID:21689636
MGI:5285024
NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
G
Tnfaip6
TNF alpha induced protein 6
involved_in
ISO
(PMID:16771708), (PMID:18586671)
RGD
PMID:16771708 PMID:18586671
NCBI chr 3:36,502,250...36,521,652
Ensembl chr 3:36,502,188...36,521,649
G
Tnn
tenascin N
involved_in
ISO
(MGI:3710297|PMID:17395156)
RGD
PMID:17395156
MGI:3710297
NCBI chr13:72,319,160...72,386,362
Ensembl chr13:72,319,155...72,408,156
G
Tob1
transducer of ErbB-2.1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1933294 (PMID:11163184)
Ensembl RGD
PMID:11163184
GO_REF:0000107
NCBI chr10:79,163,093...79,165,131
Ensembl chr10:79,160,154...79,165,215
G
Trpm4
transient receptor potential cation channel, subfamily M, member 4
IMP
RGD
PMID:23081848
RGD:10003033
NCBI chr 1:95,781,805...95,812,095
Ensembl chr 1:95,782,000...95,812,532
G
Twist1
twist family bHLH transcription factor 1
involved_in acts_upstream_of_or_within
ISO
(PMID:16888803) (PMID:15030764)
RGD
PMID:15030764 PMID:16888803
NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653
G
Twist2
twist family bHLH transcription factor 2
involved_in acts_upstream_of_or_within
ISO ISS
(PMID:11062344) MGI:3044412 (PMID:15030764) GO_REF:0000024
RGD UniProt
PMID:11062344 PMID:15030764
GO_REF:0000024
NCBI chr 9:92,374,740...92,419,222
Ensembl chr 9:92,374,574...92,419,222
G
Twsg1
twisted gastrulation BMP signaling modulator 1
acts_upstream_of_or_within
ISO
(PMID:15780974)
RGD
PMID:15780974
NCBI chr 9:105,533,116...105,567,460
Ensembl chr 9:105,533,136...105,567,479
G
Ucma
upper zone of growth plate and cartilage matrix associated
acts_upstream_of_or_within
ISO
(PMID:18156182)
RGD
PMID:18156182
NCBI chr17:73,293,977...73,303,709
Ensembl chr17:73,293,978...73,303,611
G
Vegfc
vascular endothelial growth factor C
involved_in
ISO
(MGI:6378108|PMID:26934950)
RGD
PMID:26934950
MGI:6378108
NCBI chr16:37,712,251...37,827,845
Ensembl chr16:37,712,262...37,827,848
G
Cldn18
claudin 18
acts_upstream_of_or_within
ISO
MGI:5007067 (PMID:22437732)
RGD
PMID:22437732
NCBI chr 8:100,246,499...100,265,797
Ensembl chr 8:100,247,633...100,273,351
G
Fbn1
fibrillin 1
involved_in
ISO
(PMID:24039232) (MGI:5795811|PMID:24039232)
RGD
PMID:24039232
MGI:5795811
NCBI chr 3:112,554,257...112,750,835
Ensembl chr 3:112,554,925...112,750,889
G
Fbxw7
F-box and WD repeat domain containing 7
involved_in
ISO
(PMID:29149593) (MGI:6106664|PMID:29149593)
RGD
PMID:29149593
MGI:6106664
NCBI chr 2:170,149,706...170,311,536
Ensembl chr 2:170,149,694...170,309,941
G
Tjp2
tight junction protein 2
acts_upstream_of_or_within
ISO
(PMID:22437732)
RGD
PMID:22437732
NCBI chr 1:221,709,745...221,838,291
Ensembl chr 1:221,709,745...221,838,295
G
Calca
calcitonin-related polypeptide alpha
involved_in
ISO
(PMID:10822112)
RGD
PMID:10822112
NCBI chr 1:168,878,212...168,883,176
Ensembl chr 1:168,878,214...168,883,105
G
Ccl3
C-C motif chemokine ligand 3
involved_in
ISO ISS
(PMID:21403648) GO_REF:0000024
RGD UniProt
PMID:21403648
GO_REF:0000024
NCBI chr10:68,451,388...68,452,938
Ensembl chr10:68,451,388...68,452,938
G
Ceacam1
CEA cell adhesion molecule 1
acts_upstream_of_or_within
ISO
(PMID:25490771)
RGD
PMID:25490771
NCBI chr 1:81,043,595...81,060,050
Ensembl chr 1:81,043,595...81,059,992
G
Clec2d
C-type lectin domain family 2, member D
acts_upstream_of_or_within
ISO
(PMID:12374791)
RGD
PMID:12374791
NCBI chr 4:162,216,052...162,239,530
Ensembl chr 4:162,216,572...162,239,527
G
Ctnnb1
catenin beta 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2148567|MGI:3041864 (PMID:15866165)
Ensembl RGD
PMID:15866165
GO_REF:0000107
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
G
Erfe
erythroferrone
acts_upstream_of
ISS ISO
GO_REF:0000024 (MGI:6712200|PMID:34002695)
UniProt RGD
PMID:34002695
GO_REF:0000024 MGI:6712200
NCBI chr 9:91,956,971...91,964,846
Ensembl chr 9:91,956,977...91,964,846
G
Fbn1
fibrillin 1
involved_in
ISO
(PMID:24039232) (MGI:5795811|PMID:24039232)
RGD
PMID:24039232
MGI:5795811
NCBI chr 3:112,554,257...112,750,835
Ensembl chr 3:112,554,925...112,750,889
G
Fstl3
follistatin like 3
involved_in
ISO IEA
(PMID:15574124) GO_REF:0000107
RGD Ensembl
PMID:15574124
GO_REF:0000107
NCBI chr 7:9,923,574...9,929,223
Ensembl chr 7:9,923,576...9,939,639
G
Gpr137
G protein-coupled receptor 137
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:204,129,636...204,132,622
Ensembl chr 1:204,129,636...204,133,082
G
Gpr137b
G protein-coupled receptor 137B
involved_in
ISO IBA
(MGI:6362357|PMID:31173907) GO_REF:0000033
RGD GO_Central
PMID:31173907
GO_REF:0000033 MGI:6362357
NCBI chr17:86,003,635...86,041,841
Ensembl chr17:85,966,921...86,041,835
G
Gpr55
G protein-coupled receptor 55
involved_in
ISO
(PMID:19805329)
RGD
PMID:19805329
NCBI chr 9:86,584,906...86,640,601
Ensembl chr 9:86,590,885...86,640,613
G
Iapp
islet amyloid polypeptide
acts_upstream_of_or_within
ISO
MGI:1346858|MGI:2656235 (PMID:14970190)
RGD
PMID:14970190
NCBI chr 4:175,237,107...175,244,373
Ensembl chr 4:175,237,115...175,242,920
G
Ifnb1
interferon beta 1
acts_upstream_of_or_within
ISO
(PMID:17442941)
RGD
PMID:17442941
NCBI chr 5:103,020,758...103,021,595
Ensembl chr 5:103,020,969...103,021,523
G
Ifng
interferon gamma
acts_upstream_of_or_within
ISO
(PMID:17442941)
RGD
PMID:17442941
NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375
G
Il4
interleukin 4
acts_upstream_of_or_within
ISO
(PMID:12941478), (PMID:17442941)
RGD
PMID:12941478 PMID:17442941
NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750
G
Inpp4b
inositol polyphosphate-4-phosphatase type II B
acts_upstream_of_or_within
ISO
MGI:102469|MGI:1100089 (PMID:21982707)
RGD
PMID:21982707
NCBI chr19:25,920,189...26,670,085
Ensembl chr19:25,925,358...26,280,634
G
Inpp5d
inositol polyphosphate-5-phosphatase D
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2386884 (PMID:12161749)
Ensembl RGD
PMID:12161749
GO_REF:0000107
NCBI chr 9:88,287,680...88,392,748
Ensembl chr 9:88,287,677...88,392,746
G
Lilrb4
leukocyte immunoglobulin like receptor B4
involved_in
ISO
(PMID:18802077)
RGD
PMID:18802077
NCBI chr 1:69,805,020...69,810,628
Ensembl chr 1:69,805,250...69,810,660
G
Lrrc17
leucine rich repeat containing 17
involved_in
ISO
(MGI:3850892|PMID:19336404)
RGD
PMID:19336404
MGI:3850892
NCBI chr 4:13,501,428...13,531,845
Ensembl chr 4:13,501,436...13,531,845
G
Mafb
MAF bZIP transcription factor B
involved_in
ISS ISO
GO_REF:0000024 (MGI:3849531|PMID:19440205)
UniProt RGD
PMID:19440205
GO_REF:0000024 MGI:3849531
NCBI chr 3:148,998,111...149,000,031
Ensembl chr 3:148,998,122...149,000,031
G
Nf1
neurofibromin 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1100089|MGI:1339753|MGI:97583 (PMID:17053831)
Ensembl RGD
PMID:17053831
GO_REF:0000107
NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658
G
Pias3
protein inhibitor of activated STAT, 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:17442941)
Ensembl RGD
PMID:17442941
GO_REF:0000107
NCBI chr 2:184,232,546...184,241,455
Ensembl chr 2:184,232,571...184,241,480
G
Pik3r1
phosphoinositide-3-kinase regulatory subunit 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:97306 (PMID:17053831)
Ensembl RGD
PMID:17053831
GO_REF:0000107
NCBI chr 2:32,878,942...32,963,668
Ensembl chr 2:32,882,032...32,963,631
G
Pilrb1
paired immunoglobin-like type 2 receptor beta 1
involved_in
ISO
(MGI:3819877|PMID:18802077)
RGD
PMID:18802077
MGI:3819877
NCBI chr12:18,516,161...18,525,375
Ensembl chr12:18,516,156...18,525,346
G
Pirb
paired Ig-like receptor B
involved_in
ISO
(PMID:18802077)
RGD
PMID:18802077
NCBI chr 1:65,499,195...65,506,666
Ensembl chr 1:65,499,195...65,506,666
G
Sfrp1
secreted frizzled-related protein 1
acts_upstream_of_or_within involved_in
IMP ISO IEA
MGI:3045799 (PMID:14976225) GO_REF:0000107
RGD Ensembl
PMID:14976225 PMID:17540629
GO_REF:0000107, RGD:4107086
NCBI chr16:68,575,763...68,614,180
Ensembl chr16:68,575,763...68,614,286
G
Tcta
T-cell leukemia translocation altered
involved_in
ISO
(PMID:19560569)
RGD
PMID:19560569
NCBI chr 8:108,988,588...108,992,324
Ensembl chr 8:108,988,590...108,991,564
G
Tmem178a
transmembrane protein 178A
involved_in
ISS IBA ISO IEA
GO_REF:0000024 GO_REF:0000033 (MGI:5706679|PMID:26644563) GO_REF:0000107
UniProt GO_Central RGD Ensembl
PMID:26644563
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:5706679
NCBI chr 6:14,004,629...14,063,677
Ensembl chr 6:14,004,630...14,063,549
G
Tnfaip6
TNF alpha induced protein 6
involved_in
ISO
(PMID:18586671)
RGD
PMID:18586671
NCBI chr 3:36,502,250...36,521,652
Ensembl chr 3:36,502,188...36,521,649
G
Tnfrsf11b
TNF receptor superfamily member 11B
involved_in acts_upstream_of_or_within
ISO
(MGI:6810809|PMID:9168977) (PMID:29415886)
RGD
PMID:9168977 PMID:29415886
MGI:6810809
NCBI chr 7:85,566,520...85,594,526
Ensembl chr 7:85,566,520...85,594,538
G
Tob2
transducer of ERBB2, 2
acts_upstream_of_or_within
ISO
MGI:3789484 (PMID:18358842)
RGD
PMID:18358842
NCBI chr 7:113,362,703...113,371,423
Ensembl chr 7:113,361,148...113,372,688
G
Ubash3b
ubiquitin associated and SH3 domain containing, B
acts_upstream_of_or_within
ISO
(PMID:23149425)
RGD
PMID:23149425
NCBI chr 8:41,385,419...41,532,248
Ensembl chr 8:41,388,341...41,532,201
G
Hes1
hes family bHLH transcription factor 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2149672 (PMID:10615124)
Ensembl RGD
PMID:10615124
GO_REF:0000107
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
G
Mir7-1
microRNA 7-1
acts_upstream_of_or_within
ISO
(PMID:22764048)
RGD
PMID:22764048
NCBI chr17:6,273,264...6,273,360
Ensembl chr17:6,273,264...6,273,360
G
Cntf
ciliary neurotrophic factor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:15207851)
Ensembl RGD
PMID:15207851
GO_REF:0000107
NCBI chr 1:209,887,854...209,889,877
Ensembl chr 1:209,887,854...209,889,877
G
Dlx1
distal-less homeobox 1
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:5316576|PMID:21875655) GO_REF:0000107
UniProt RGD Ensembl
PMID:21875655
GO_REF:0000024 GO_REF:0000107 MGI:5316576
NCBI chr 3:56,356,190...56,360,780
Ensembl chr 3:56,356,190...56,360,780
G
Dlx2
distal-less homeobox 2
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:5316576|PMID:21875655) GO_REF:0000024
Ensembl RGD UniProt
PMID:21875655
GO_REF:0000024 GO_REF:0000107 MGI:5316576
NCBI chr 3:56,370,238...56,373,581
Ensembl chr 3:56,370,483...56,373,597
G
Notch1
notch receptor 1
acts_upstream_of_or_within
ISO
MGI:1933835|MGI:3052237 (PMID:16452096)
RGD
PMID:16452096
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Sox8
SRY-box transcription factor 8
acts_upstream_of_or_within
ISO
MGI:98371 (PMID:19490914)
RGD
PMID:19490914
NCBI chr10:14,584,829...14,589,818
Ensembl chr10:14,584,829...14,589,818
G
Sox9
SRY-box transcription factor 9
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:98370 (PMID:19490914)
UniProt RGD
PMID:19490914
GO_REF:0000024
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
G
Bcl6
BCL6, transcription repressor
acts_upstream_of_or_within
ISO
MGI:2158439 (PMID:15240705)
RGD
PMID:15240705
NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389
G
Csf1r
colony stimulating factor 1 receptor
IMP
RGD
PMID:18434589
RGD:151665814
NCBI chr18:54,546,673...54,590,418
Ensembl chr18:54,546,659...54,590,415
G
Ptpn2
protein tyrosine phosphatase, non-receptor type 2
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:5320871|PMID:22080863)
UniProt Ensembl RGD
PMID:22080863
GO_REF:0000024 GO_REF:0000107 MGI:5320871
NCBI chr18:61,229,012...61,294,662
Ensembl chr18:61,229,014...61,294,627
G
Hes1
hes family bHLH transcription factor 1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:12032823)
UniProt Ensembl RGD
PMID:12032823
GO_REF:0000024 GO_REF:0000107
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
G
Hes5
hes family bHLH transcription factor 5
involved_in
IMP
PMID:12032823
UniProt
PMID:12032823
RGD:8553570
NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001
G
Notch1
notch receptor 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:5319620|PMID:12032823)
UniProt RGD
PMID:12032823
GO_REF:0000024 MGI:5319620
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Cd44
CD44 molecule
involved_in
ISO
(MGI:5688819|PMID:25065622)
RGD
PMID:25065622
MGI:5688819
NCBI chr 3:89,155,850...89,244,615
Ensembl chr 3:89,157,058...89,244,620
G
Ctla4
cytotoxic T-lymphocyte-associated protein 4
involved_in
ISO IBA
(PMID:18641304) GO_REF:0000033
RGD GO_Central
PMID:18641304
GO_REF:0000033
NCBI chr 9:62,318,874...62,325,978
Ensembl chr 9:62,319,312...62,324,963
G
Hspb1
heat shock protein family B (small) member 1
IMP
RGD
PMID:30287503
RGD:38549580
NCBI chr12:20,794,014...20,795,675
Ensembl chr12:20,794,028...20,795,743
G
Irf1
interferon regulatory factor 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:3803082|PMID:18641303)
UniProt RGD
PMID:18641303
GO_REF:0000024 MGI:3803082
NCBI chr10:37,917,155...37,924,166
Ensembl chr10:37,916,670...37,924,166
G
Lag3
lymphocyte activating 3
involved_in
ISS ISO
GO_REF:0000024 (MGI:3510279|PMID:15485628)
UniProt RGD
PMID:15485628
GO_REF:0000024 MGI:3510279
NCBI chr 4:157,712,665...157,722,229
Ensembl chr 4:157,712,667...157,720,404
G
Mdk
midkine
involved_in
ISO IEA ISS
(PMID:22323540) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:22323540
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:77,901,134...77,903,997
Ensembl chr 3:77,901,158...77,903,130
G
Mir21
microRNA 21
involved_in
ISO
RNAcentral:URS0000338542_9606 (PMID:22387553)
RGD
PMID:22387553
NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348
G
Mir30b
microRNA 30b
involved_in
ISO
RNAcentral:URS000039ED8D_9606 (PMID:22387553)
RGD
PMID:22387553
NCBI chr 7:100,132,589...100,132,675
Ensembl chr 7:100,132,589...100,132,675
G
Tnfsf4
TNF superfamily member 4
involved_in
ISO
(MGI:3806904|PMID:18713990)
RGD
PMID:18713990
MGI:3806904
NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788
G
Tug1
taurine up-regulated 1
IMP
RGD
PMID:30287503
RGD:38549580
NCBI chr14:78,519,894...78,526,927
Ensembl chr14:78,522,506...78,526,927
G
Dusp10
dual specificity phosphatase 10
acts_upstream_of_or_within
ISO
MGI:3052343 (PMID:19696743)
RGD
PMID:19696743
NCBI chr13:95,613,716...95,651,716
Ensembl chr13:95,614,292...95,651,716
G
Grn
granulin precursor
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:12526812) GO_REF:0000024
Ensembl RGD UniProt
PMID:12526812
GO_REF:0000024 GO_REF:0000107
NCBI chr10:87,387,672...87,393,777
Ensembl chr10:87,387,638...87,393,775
G
Ins2
insulin 2
involved_in
ISO
(PMID:11443198)
RGD
PMID:11443198
NCBI chr 1:197,843,277...197,992,522
Ensembl chr 1:197,843,281...197,864,775
G
Rps19
ribosomal protein S19
involved_in
ISO
(PMID:15750715)
RGD
PMID:15750715
NCBI chr 1:80,480,718...80,486,511
Ensembl chr 1:80,480,951...80,486,508
G
Slamf8
SLAM family member 8
acts_upstream_of_or_within
ISO
MGI:5442794 (PMID:25799045)
RGD
PMID:25799045
NCBI chr13:85,047,729...85,057,571
Ensembl chr13:85,047,727...85,057,211
G
Casz1
castor zinc finger 1
acts_upstream_of_or_within
ISO
MGI:3052661|MGI:4841554 (PMID:25654255)
RGD
PMID:25654255
NCBI chr 5:159,243,965...159,393,935
Ensembl chr 5:159,243,995...159,393,400
G
Cav3
caveolin 3
involved_in
ISO
(PMID:12847114)
RGD
PMID:12847114
NCBI chr 4:145,582,168...145,598,142
Ensembl chr 4:145,582,060...145,598,137
G
Mfn2
mitofusin 2
IMP
RGD
PMID:24777478
RGD:13204833
NCBI chr 5:158,304,285...158,335,502
Ensembl chr 5:158,304,287...158,335,342
G
Akirin1
akirin 1
involved_in
ISO
(MGI:6201977|PMID:18255059)
RGD
PMID:18255059
MGI:6201977
NCBI chr 5:135,989,378...136,004,782
Ensembl chr 5:135,989,465...136,004,762
G
Ephb1
Eph receptor B1
involved_in
ISS ISO
GO_REF:0000024 (MGI:5897527|PMID:27446912)
UniProt RGD
PMID:27446912
GO_REF:0000024 MGI:5897527
NCBI chr 8:102,507,549...102,944,839
Ensembl chr 8:102,507,549...102,944,839
G
Mstn
myostatin
involved_in
ISS
GO_REF:0000024
AgBase
GO_REF:0000024
NCBI chr 9:48,452,533...48,458,933
Ensembl chr 9:48,452,533...48,458,933
G
Six4
SIX homeobox 4
involved_in
ISO
(MGI:4836102|PMID:20696153)
RGD
PMID:20696153
MGI:4836102
NCBI chr 6:91,802,328...91,816,002
Ensembl chr 6:91,802,329...91,815,992
G
Ascl2
achaete-scute family bHLH transcription factor 2
IDA
RGD
PMID:12196582
RGD:625617
NCBI chr 1:198,148,999...198,151,406
Ensembl chr 1:198,148,999...198,151,406
G
Cers2
ceramide synthase 2
IMP
RGD
PMID:22393241
RGD:11041067
NCBI chr 2:182,890,527...182,898,805
Ensembl chr 2:182,890,493...182,933,314
G
Dicer1
dicer 1 ribonuclease III
involved_in
ISO
(MGI:4830414|PMID:20805985)
RGD
PMID:20805985
MGI:4830414
NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
G
Fas
Fas cell surface death receptor
IMP
RGD
PMID:29970988
RGD:13792563
NCBI chr 1:231,798,963...231,832,591
Ensembl chr 1:231,798,960...231,832,591
G
Nf1
neurofibromin 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857444|UniProtKB:Q02297 (PMID:9001241)
Ensembl RGD
PMID:9001241
GO_REF:0000107
NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658
G
Nf2
NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1926957 (PMID:10887156)
Ensembl RGD
PMID:10887156
GO_REF:0000107
NCBI chr14:79,627,399...79,710,709
Ensembl chr14:79,627,399...79,710,667
G
Rnf10
ring finger protein 10
involved_in
IDA
PMID:18941509
UniProt
PMID:18941509
RGD:8553607
NCBI chr12:41,341,708...41,375,505
Ensembl chr12:41,341,717...41,375,504
G
Ski
Ski proto-oncogene
acts_upstream_of_or_within
ISO
UniProtKB:P01137 (PMID:15312649)
RGD
PMID:15312649
NCBI chr 5:165,713,525...165,782,134
Ensembl chr 5:165,714,093...165,782,733
G
Sox10
SRY-box transcription factor 10
IMP
RGD
PMID:25536222
RGD:12879826
NCBI chr 7:110,725,274...110,734,651
Ensembl chr 7:110,725,274...110,735,544
G
Cers2
ceramide synthase 2
involved_in
IMP
PMID:22393241
BHF-UCL
PMID:22393241
RGD:11041067
NCBI chr 2:182,890,527...182,898,805
Ensembl chr 2:182,890,493...182,933,314
G
Syt4
synaptotagmin 4
involved_in
ISO
(MGI:5796263|PMID:15390175)
RGD
PMID:15390175
MGI:5796263
NCBI chr18:23,036,973...23,046,380
Ensembl chr18:23,038,378...23,046,332
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Myocd
myocardin
involved_in
ISO IEA
(PMID:18451334) GO_REF:0000107
RGD Ensembl
PMID:18451334
GO_REF:0000107
NCBI chr10:49,833,219...49,928,806
Ensembl chr10:49,836,641...49,927,627
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S100b
S100 calcium binding protein B
IMP
RGD
PMID:20069545
RGD:5508829
NCBI chr20:12,372,866...12,381,619
Ensembl chr20:12,372,881...12,394,743
G
Ankrd17
ankyrin repeat domain 17
acts_upstream_of_or_within
ISO
MGI:4360512 (PMID:19619540)
RGD
PMID:19619540
NCBI chr14:17,723,239...17,861,841
Ensembl chr14:17,721,932...17,862,617
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Ereg
epiregulin
involved_in
ISO ISS
(PMID:14581411) GO_REF:0000024
RGD UniProt
PMID:14581411
GO_REF:0000024
NCBI chr14:17,027,287...17,041,062
Ensembl chr14:17,027,287...17,041,062
G
Foxo4
forkhead box O4
involved_in
ISO
(PMID:16054032)
RGD
PMID:16054032
NCBI chr X:66,385,241...66,392,115
Ensembl chr X:66,385,558...66,392,115
G
Hey1
hes-related family bHLH transcription factor with YRPW motif 1
involved_in
ISO
(PMID:18239137)
RGD
PMID:18239137
NCBI chr 2:93,096,605...93,100,316
Ensembl chr 2:93,095,498...93,100,312
G
Hey2
hes-related family bHLH transcription factor with YRPW motif 2
involved_in
ISO
(MGI:5284767|PMID:18239137)
RGD
PMID:18239137
MGI:5284767
NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
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Mecp2
methyl CpG binding protein 2
involved_in
ISO
(MGI:5811980|PMID:25722434)
RGD
PMID:25722434
MGI:5811980
NCBI chr X:151,781,177...151,844,687
Ensembl chr X:151,789,930...151,844,689
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Med28
mediator complex subunit 28
acts_upstream_of_or_within
ISO
(PMID:17848560)
RGD
PMID:17848560
NCBI chr14:65,594,785...65,603,583
Ensembl chr14:65,594,647...65,603,583
G
Prdm6
PR/SET domain 6
acts_upstream_of_or_within
ISO
(PMID:16537907)
RGD
PMID:16537907
NCBI chr18:46,904,115...47,008,482
Ensembl chr18:46,904,127...47,007,823
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Rbpms2
RNA binding protein, mRNA processing factor 2
involved_in
ISO IBA
(PMID:25064856) GO_REF:0000033
RGD GO_Central
PMID:25064856
GO_REF:0000033
NCBI chr 8:66,153,169...66,184,278
Ensembl chr 8:66,153,593...66,184,268
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Rcan1
regulator of calcineurin 1
IDA
RGD
PMID:15148306
RGD:1581653
NCBI chr11:31,622,208...31,702,150
Ensembl chr11:31,622,210...31,702,045
G
Paep
progestagen associated endometrial protein
involved_in
ISO
(PMID:15883155)
RGD
PMID:15883155
NCBI chr 3:8,531,136...8,534,430
Ensembl chr 3:8,531,138...8,534,430
G
Bbs12
Bardet-Biedl syndrome 12
acts_upstream_of_or_within
ISO
MGI:5444297 (PMID:22958920)
RGD
PMID:22958920
NCBI chr 2:120,203,396...120,221,024
Ensembl chr 2:120,203,428...120,219,255
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Ccnk
cyclin K
acts_upstream_of_or_within
ISO
(PMID:22547058)
RGD
PMID:22547058
NCBI chr 6:127,090,115...127,113,195
Ensembl chr 6:127,090,569...127,113,191
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Cdk12
cyclin-dependent kinase 12
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:22547058)
Ensembl RGD
PMID:22547058
GO_REF:0000107
NCBI chr10:83,201,177...83,256,906
Ensembl chr10:83,201,211...83,280,888 Ensembl chr10:83,201,211...83,280,888
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Cdk13
cyclin-dependent kinase 13
acts_upstream_of_or_within
ISO
(PMID:22547058)
RGD
PMID:22547058
NCBI chr17:47,251,145...47,344,675
Ensembl chr17:47,251,163...47,341,721
G
Esrrb
estrogen-related receptor beta
involved_in
ISS ISO
GO_REF:0000024 (MGI:5887187|PMID:26206133)
UniProt RGD
PMID:26206133
GO_REF:0000024 MGI:5887187
NCBI chr 6:106,007,701...106,163,136
Ensembl chr 6:106,008,095...106,160,791
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Ezh2
enhancer of zeste 2 polycomb repressive complex 2 subunit
acts_upstream_of_or_within
ISO
MGI:2661097 (PMID:19303854)
RGD
PMID:19303854
NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
G
Hes1
hes family bHLH transcription factor 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:19682396)
Ensembl RGD
PMID:19682396
GO_REF:0000107
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
G
Hes5
hes family bHLH transcription factor 5
involved_in
ISO ISS
(PMID:19682396) GO_REF:0000024
RGD UniProt
PMID:19682396
GO_REF:0000024
NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001
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Hnrnpu
heterogeneous nuclear ribonucleoprotein U
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:5908336|PMID:21235343) (PMID:21235343) GO_REF:0000024
Ensembl RGD UniProt
PMID:21235343
GO_REF:0000024 GO_REF:0000107 MGI:5908336
NCBI chr13:90,069,058...90,086,905
Ensembl chr13:90,074,181...90,086,588
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Jag1
jagged canonical Notch ligand 1
involved_in
ISO IEA
(PMID:19682396) GO_REF:0000107
RGD Ensembl
PMID:19682396
GO_REF:0000107
NCBI chr 3:124,406,783...124,442,220
Ensembl chr 3:124,406,794...124,442,209
G
Lbh
LBH regulator of WNT signaling pathway
involved_in
ISO
(MGI:5634223|PMID:25655704)
RGD
PMID:25655704
MGI:5634223
NCBI chr 6:22,569,238...22,593,056
Ensembl chr 6:22,568,834...22,593,079
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Mir125a
microRNA 125a
acts_upstream_of_or_within
ISO
MGI:1921298 (PMID:22751012)
RGD
PMID:22751012
NCBI chr 1:58,677,626...58,677,710
Ensembl chr 1:58,677,626...58,677,710
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Nanog
Nanog homeobox
acts_upstream_of_or_within
ISO
(PMID:17940068)
RGD
PMID:17940068
NCBI chr 4:155,943,737...155,951,116
Ensembl chr 4:155,943,737...155,951,116
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Ncoa3
nuclear receptor coactivator 3
acts_upstream_of_or_within
ISO
(PMID:22977234)
RGD
PMID:22977234
NCBI chr 3:154,738,566...154,821,395
Ensembl chr 3:154,738,581...154,818,594
G
Nelfb
negative elongation factor complex member B
involved_in
ISO
(MGI:3845453|PMID:19340312)
RGD
PMID:19340312
MGI:3845453
NCBI chr 3:8,010,883...8,027,403
Ensembl chr 3:8,010,888...8,027,403
G
Notch1
notch receptor 1
involved_in
ISO
(PMID:19682396)
RGD
PMID:19682396
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Stat3
signal transducer and activator of transcription 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:25335925)
Ensembl RGD
PMID:25335925
GO_REF:0000107
NCBI chr10:85,811,206...85,863,057
Ensembl chr10:85,811,218...85,863,057
G
Tbx3
T-box transcription factor 3
acts_upstream_of_or_within
ISO
MGI:3769504 (PMID:18356246)
RGD
PMID:18356246
NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708
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Trim6
tripartite motif containing 6
involved_in
ISO
(MGI:5492022|PMID:22328504)
RGD
PMID:22328504
MGI:5492022
NCBI chr 1:158,683,746...158,696,936
Ensembl chr 1:158,683,746...158,696,914
G
Yap1
Yes1 associated transcriptional regulator
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:20516196)
Ensembl RGD
PMID:20516196
GO_REF:0000107
NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010
G
Ythdf2
YTH N6-methyladenosine RNA binding protein F2
involved_in
ISO
(PMID:32169943)
RGD
PMID:32169943
NCBI chr 5:144,381,426...144,407,126
Ensembl chr 5:144,381,431...144,408,144
G
Zfp36l2
zinc finger protein 36, C3H type-like 2
involved_in
ISO
(MGI:5500826|PMID:23748442)
RGD
PMID:23748442
MGI:5500826
NCBI chr 6:10,490,032...10,494,073
Ensembl chr 6:10,490,032...10,494,064
G
Hes1
hes family bHLH transcription factor 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2149672 (PMID:18173746)
Ensembl RGD
PMID:18173746
GO_REF:0000107
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
G
Ezh2
enhancer of zeste 2 polycomb repressive complex 2 subunit
acts_upstream_of_or_within
ISO
(PMID:15520282)
RGD
PMID:15520282
NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
G
Msx1
msh homeobox 1
acts_upstream_of_or_within
ISO
MGI:99146 (PMID:20004191)
RGD
PMID:20004191
NCBI chr14:72,961,036...72,964,970
Ensembl chr14:72,961,148...72,964,966
G
Ybx1
Y box binding protein 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:20004191)
Ensembl RGD
PMID:20004191
GO_REF:0000107
NCBI chr 5:132,882,137...132,898,885
Ensembl chr 5:132,882,145...132,898,862
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Cd74
CD74 molecule
acts_upstream_of_or_within
ISO
MGI:1927205 (PMID:7679955)
RGD
PMID:7679955
NCBI chr18:54,256,757...54,266,003
Ensembl chr18:54,256,778...54,266,003
G
Dtx1
deltex E3 ubiquitin ligase 1
acts_upstream_of_or_within
ISO
(PMID:12794108)
RGD
PMID:12794108
NCBI chr12:35,849,647...35,880,835
Ensembl chr12:35,849,617...35,880,838
G
Ifnb1
interferon beta 1
involved_in
ISO
(PMID:20554961)
RGD
PMID:20554961
NCBI chr 5:103,020,758...103,021,595
Ensembl chr 5:103,020,969...103,021,523
G
Ifnl1
interferon, lambda 1
involved_in
ISO
(PMID:19346497)
RGD
PMID:19346497
NCBI chr 1:83,798,651...83,800,297
Ensembl chr 1:83,798,703...83,800,235
G
Nrarp
Notch-regulated ankyrin repeat protein
acts_upstream_of_or_within
ISO
(PMID:12794108)
RGD
PMID:12794108
NCBI chr 3:7,992,582...7,995,136
Ensembl chr 3:7,992,552...7,995,133
G
Prdx2
peroxiredoxin 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2668456 (PMID:16290204)
Ensembl RGD
PMID:16290204
GO_REF:0000107
NCBI chr19:23,180,927...23,186,217
Ensembl chr19:23,180,930...23,186,194
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Bmp4
bone morphogenetic protein 4
involved_in
ISO
(PMID:12421925)
RGD
PMID:12421925
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Foxj1
forkhead box J1
involved_in
ISO IEA
(MGI:3713603|PMID:16339515) GO_REF:0000107
RGD Ensembl
PMID:16339515
GO_REF:0000107 MGI:3713603
NCBI chr10:101,566,299...101,570,370
Ensembl chr10:101,566,304...101,570,237
G
Ihh
Indian hedgehog signaling molecule
involved_in
ISO
(MGI:3836494|PMID:19109233)
RGD
PMID:19109233
MGI:3836494
NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532
G
Nfkbid
NFKB inhibitor delta
acts_upstream_of_or_within
ISO
(PMID:11931770)
RGD
PMID:11931770
NCBI chr 1:85,679,353...85,690,415
Ensembl chr 1:85,680,861...85,690,447
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Rag2
recombination activating 2
IMP
RGD
PMID:30206106
RGD:38508903
NCBI chr 3:87,902,373...87,910,227
Ensembl chr 3:87,902,238...87,911,066
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Shh
sonic hedgehog signaling molecule
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:10981962)
Ensembl RGD
PMID:10981962
GO_REF:0000107
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Zc3h8
zinc finger CCCH type containing 8
involved_in
ISO
(PMID:12153508)
RGD
PMID:12153508
NCBI chr 3:116,176,779...116,193,752
Ensembl chr 3:116,176,798...116,193,787
G
Ascl2
achaete-scute family bHLH transcription factor 2
involved_in
ISO
(MGI:5565031|PMID:24463518)
RGD
PMID:24463518
MGI:5565031
NCBI chr 1:198,148,999...198,151,406
Ensembl chr 1:198,148,999...198,151,406
G
Il4r
interleukin 4 receptor
acts_upstream_of_or_within
ISO
MGI:96109 (PMID:16424184)
RGD
PMID:16424184
NCBI chr 1:180,115,061...180,139,981
Ensembl chr 1:180,115,120...180,139,980
G
Jak3
Janus kinase 3
involved_in
ISS ISO
GO_REF:0000024 (MGI:3719947|PMID:16020505)
BHF-UCL RGD
PMID:16020505
GO_REF:0000024 MGI:3719947
NCBI chr16:18,386,330...18,398,542
Ensembl chr16:18,386,405...18,398,536
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Tnfsf4
TNF superfamily member 4
involved_in
ISO
(MGI:4942267|PMID:9670042)
RGD
PMID:9670042
MGI:4942267
NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788
G
Ascl2
achaete-scute family bHLH transcription factor 2
involved_in
ISO
(MGI:5565031|PMID:24463518)
RGD
PMID:24463518
MGI:5565031
NCBI chr 1:198,148,999...198,151,406
Ensembl chr 1:198,148,999...198,151,406
G
Foxp3
forkhead box P3
involved_in
ISO
(PMID:23169781)
RGD
PMID:23169781
NCBI chr X:14,908,494...14,924,994
Ensembl chr X:14,908,494...14,923,838
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Il2
interleukin 2
involved_in
ISO
RNAcentral:URS000039ED8D_10090 (MGI:5634593|PMID:25642768)
RGD
PMID:25642768
MGI:5634593
NCBI chr 2:120,004,862...120,009,566
Ensembl chr 2:120,004,862...120,009,566
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Il4
interleukin 4
acts_upstream_of_or_within
ISO
(PMID:18792410)
RGD
PMID:18792410
NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750
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Pf4
platelet factor 4
IDA
RGD
PMID:24986443
RGD:329901907
NCBI chr14:17,298,304...17,299,220
Ensembl chr14:17,298,308...17,299,365
G
Rc3h1
ring finger and CCCH-type domains 1
involved_in
ISO
(MGI:6142401|PMID:25282160)
RGD
PMID:25282160
MGI:6142401
NCBI chr13:73,174,075...73,245,762
Ensembl chr13:73,173,946...73,238,839
G
Rc3h2
ring finger and CCCH-type domains 2
involved_in
ISO
(MGI:6142401|PMID:25282160)
RGD
PMID:25282160
MGI:6142401
NCBI chr 3:21,121,531...21,186,711
Ensembl chr 3:21,110,679...21,179,933
G
Smad7
SMAD family member 7
involved_in
IEA ISO
GO_REF:0000107 (MGI:5634593|PMID:25642768)
Ensembl RGD
PMID:25642768
GO_REF:0000107 MGI:5634593
NCBI chr18:68,988,429...69,016,774
Ensembl chr18:68,988,429...69,016,765
G
Tbx21
T-box transcription factor 21
involved_in
ISO
(MGI:4868293|PMID:21151104)
RGD
PMID:21151104
MGI:4868293
NCBI chr10:82,082,322...82,098,831
Ensembl chr10:82,082,322...82,098,831
G
Zbtb7b
zinc finger and BTB domain containing 7B
acts_upstream_of_or_within
ISO
MGI:3530739 (PMID:23034280)
RGD
PMID:23034280
NCBI chr 2:174,795,831...174,811,980
Ensembl chr 2:174,797,453...174,814,236
G
Zc3h12a
zinc finger CCCH type containing 12A
involved_in
ISS ISO
GO_REF:0000024 (MGI:6142401|PMID:25282160)
UniProt RGD
PMID:25282160
GO_REF:0000024 MGI:6142401
NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351
G
Loxl3
lysyl oxidase-like 3
involved_in
ISO
(MGI:5825383|PMID:28065600) (PMID:28065600)
RGD
PMID:28065600
MGI:5825383
NCBI chr 4:115,540,640...115,556,958
Ensembl chr 4:115,540,685...115,557,466
G
Tbx21
T-box transcription factor 21
involved_in
ISO
(MGI:4868293|PMID:21151104)
RGD
PMID:21151104
MGI:4868293
NCBI chr10:82,082,322...82,098,831
Ensembl chr10:82,082,322...82,098,831
G
Tnfsf18
TNF superfamily member 18
involved_in
ISO
(MGI:5551556|PMID:24107315)
RGD
PMID:24107315
MGI:5551556
NCBI chr13:73,833,478...73,907,249
Ensembl chr13:73,831,252...73,843,169
G
Anxa1
annexin A1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000118 GO_REF:0000107 (PMID:17008549)
UniProt TreeGrafter Ensembl RGD
PMID:17008549
GO_REF:0000024 GO_REF:0000107 GO_REF:0000118
NCBI chr 1:217,861,175...217,877,205
Ensembl chr 1:217,861,175...217,877,343
G
Ascl2
achaete-scute family bHLH transcription factor 2
involved_in
ISO
(MGI:5565031|PMID:24463518)
RGD
PMID:24463518
MGI:5565031
NCBI chr 1:198,148,999...198,151,406
Ensembl chr 1:198,148,999...198,151,406
G
Bcl6
BCL6, transcription repressor
acts_upstream_of_or_within
ISO
MGI:96559 (PMID:12594267)
RGD
PMID:12594267
NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389
G
Hlx
H2.0-like homeobox
acts_upstream_of_or_within
ISO
MGI:105367|MGI:2182089 (PMID:16424184)
RGD
PMID:16424184
NCBI chr13:96,280,335...96,285,750
Ensembl chr13:96,280,339...96,285,750
G
Socs5
suppressor of cytokine signaling 5
involved_in
ISO
(MGI:3687909|PMID:12242343)
RGD
PMID:12242343
MGI:3687909
NCBI chr 6:7,481,039...7,512,644
Ensembl chr 6:7,481,095...7,514,834
G
Zfp35
zinc finger protein 35
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr18:15,268,852...15,284,334
Ensembl chr18:15,268,814...15,285,088
G
Rc3h1
ring finger and CCCH-type domains 1
acts_upstream_of_or_within
ISO
MGI:3581675 (PMID:15917799)
RGD
PMID:15917799
NCBI chr13:73,174,075...73,245,762
Ensembl chr13:73,173,946...73,238,839
G
Cftr
CF transmembrane conductance regulator
IMP
RGD
PMID:23178930
RGD:11567224
NCBI chr 4:46,561,269...46,728,759
Ensembl chr 4:46,560,885...46,728,756
G
Cfl1
cofilin 1
IMP
RGD
PMID:24093776
RGD:11570550
NCBI chr 1:202,796,012...202,801,337
Ensembl chr 1:202,786,627...202,817,587
G
Shh
sonic hedgehog signaling molecule
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:2388350|PMID:12399320) GO_REF:0000024
Ensembl RGD UniProt
PMID:12399320
GO_REF:0000024 GO_REF:0000107 MGI:2388350
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Mir100
microRNA 100
involved_in
ISO
(PMID:18548003)
RGD
PMID:18548003
NCBI chr 8:41,901,225...41,901,304
Ensembl chr 8:41,901,225...41,901,304
G
Mir15b
microRNA 15b
involved_in
ISO
(PMID:18548003)
RGD
PMID:18548003
NCBI chr 2:153,245,200...153,245,297
Ensembl chr 2:153,245,200...153,245,297
G
Mir221
microRNA 221
involved_in
ISO
(PMID:18548003), (PMID:19088079)
RGD
PMID:18548003 PMID:19088079
NCBI chr X:3,429,465...3,429,573
Ensembl chr X:3,429,465...3,429,573
G
Mir26a
microRNA 26a
involved_in
ISO
(PMID:20857419)
RGD
PMID:20857419
NCBI chr 8:118,755,289...118,755,378
Ensembl chr 8:118,755,289...118,755,378
G
Nfatc1
nuclear factor of activated T-cells 1
involved_in
ISO
(PMID:23853098)
RGD
PMID:23853098
NCBI chr18:74,046,422...74,156,041
Ensembl chr18:74,046,904...74,156,028
G
Nfatc2
nuclear factor of activated T-cells 2
involved_in
ISO
(PMID:23853098)
RGD
PMID:23853098
NCBI chr 3:157,195,970...157,328,640
Ensembl chr 3:157,198,872...157,328,325
G
Nfatc3
nuclear factor of activated T-cells 3
involved_in
ISO
(PMID:23853098)
RGD
PMID:23853098
NCBI chr19:33,960,643...34,035,150
Ensembl chr19:33,960,852...34,035,150
G
Pdcd4
programmed cell death 4
involved_in
ISO
(PMID:18548003)
RGD
PMID:18548003
NCBI chr 1:252,921,342...252,944,278
Ensembl chr 1:252,921,392...252,944,275
G
Pdgfb
platelet derived growth factor subunit B
involved_in
IEA ISO
GO_REF:0000107 (PMID:19088079)
Ensembl RGD
PMID:19088079
GO_REF:0000107
NCBI chr 7:111,539,444...111,557,984
Ensembl chr 7:111,540,345...111,557,984
G
Dnmt1
DNA methyltransferase 1
involved_in
ISO IEA
(PMID:27021683) GO_REF:0000107
RGD Ensembl
PMID:27021683
GO_REF:0000107
NCBI chr 8:19,440,611...19,486,659
Ensembl chr 8:19,440,611...19,486,659
G
Fgf9
fibroblast growth factor 9
involved_in
IMP
PMID:28259995
BHF-UCL
PMID:28259995
RGD:13601993
NCBI chr15:32,208,993...32,254,952
Ensembl chr15:32,210,074...32,253,309
G
Rtn4
reticulon 4
involved_in
ISS ISO
GO_REF:0000024 (MGI:5492189|PMID:23625008)
UniProt RGD
PMID:23625008
GO_REF:0000024 MGI:5492189
NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686
G
Xdh
xanthine dehydrogenase
involved_in
IEA ISO
GO_REF:0000107 (PMID:18386220)
Ensembl RGD
PMID:18386220
GO_REF:0000107
NCBI chr 6:21,530,463...21,592,172
Ensembl chr 6:21,530,113...21,592,268
G
Ada
adenosine deaminase
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857117 (PMID:11067867), (PMID:12163459), (PMID:16670300)
Ensembl RGD
PMID:11067867 PMID:12163459 PMID:16670300
GO_REF:0000107
NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088
G
Gli3
GLI family zinc finger 3
involved_in
ISO
(MGI:3695957|PMID:15855276)
RGD
PMID:15855276
MGI:3695957
NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
G
Ihh
Indian hedgehog signaling molecule
involved_in
ISO
(MGI:3836494|PMID:19109233)
RGD
PMID:19109233
MGI:3836494
NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532
G
Itpkb
inositol-trisphosphate 3-kinase B
acts_upstream_of_or_within
ISO
MGI:3039799 (PMID:15064401)
RGD
PMID:15064401
NCBI chr13:92,069,160...92,164,281
Ensembl chr13:92,069,216...92,162,004
G
Nkap
NFKB activating protein
involved_in
ISO ISS
(PMID:19409814) GO_REF:0000024
RGD UniProt
PMID:19409814
GO_REF:0000024
NCBI chr X:116,373,031...116,392,677
Ensembl chr X:116,372,839...116,394,945
G
Pnp
purine nucleoside phosphorylase
acts_upstream_of_or_within
ISO
(PMID:16964310)
RGD
PMID:16964310
NCBI chr15:24,170,607...24,178,269
Ensembl chr15:24,170,602...24,203,986
G
Rhoa
ras homolog family member A
involved_in
ISO
(MGI:5640904|PMID:25398325)
RGD
PMID:25398325
MGI:5640904
NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
G
Shh
sonic hedgehog signaling molecule
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:3029054|PMID:14764698) GO_REF:0000024
Ensembl RGD UniProt
PMID:14764698
GO_REF:0000024 GO_REF:0000107 MGI:3029054
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Syk
spleen associated tyrosine kinase
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:99613 (PMID:9275205)
Ensembl RGD
PMID:9275205
GO_REF:0000107
NCBI chr17:12,604,615...12,678,437
Ensembl chr17:12,604,619...12,661,410
G
Zap70
zeta chain of T cell receptor associated protein kinase 70
acts_upstream_of_or_within
ISO
MGI:2677447|MGI:3526403|MGI:99515 (PMID:7630421), (PMID:9208839), (PMID:9275205)
RGD
PMID:7630421 PMID:9208839 PMID:9275205
NCBI chr 9:38,989,750...39,011,701
Ensembl chr 9:38,989,750...39,011,700
G
Dlx1
distal-less homeobox 1
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:5316576|PMID:21875655) GO_REF:0000107
UniProt RGD Ensembl
PMID:21875655
GO_REF:0000024 GO_REF:0000107 MGI:5316576
NCBI chr 3:56,356,190...56,360,780
Ensembl chr 3:56,356,190...56,360,780
G
Dlx2
distal-less homeobox 2
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:5316576|PMID:21875655) GO_REF:0000107
UniProt RGD Ensembl
PMID:21875655
GO_REF:0000024 GO_REF:0000107 MGI:5316576
NCBI chr 3:56,370,238...56,373,581
Ensembl chr 3:56,370,483...56,373,597
G
Tgif1
TGFB-induced factor homeobox 1
acts_upstream_of_or_within
ISO
(PMID:18973577)
RGD
PMID:18973577
NCBI chr 9:110,748,094...110,757,714
Ensembl chr 9:110,720,921...110,757,802
G
Tgif2
TGFB-induced factor homeobox 2
acts_upstream_of_or_within
ISO
(PMID:18926818)
RGD
PMID:18926818
NCBI chr 3:145,333,152...145,348,599
Ensembl chr 3:145,333,418...145,348,596
G
Cth
cystathionine gamma-lyase
involved_in
ISO IEA
(PMID:21659522) GO_REF:0000107
RGD Ensembl
PMID:21659522
GO_REF:0000107
NCBI chr 2:246,975,888...247,002,234
Ensembl chr 2:246,975,894...247,002,234
G
Efemp2
EGF containing fibulin extracellular matrix protein 2
involved_in
ISO
(MGI:4947512|PMID:20019329)
RGD
PMID:20019329
MGI:4947512
NCBI chr 1:202,781,692...202,789,784
Ensembl chr 1:202,781,665...202,789,414
G
Csf1r
colony stimulating factor 1 receptor
IMP
RGD
PMID:33841088
RGD:151665762
NCBI chr18:54,546,673...54,590,418
Ensembl chr18:54,546,659...54,590,415
G
Actr3
actin related protein 3
IMP
RGD
PMID:23843614
RGD:8553949
NCBI chr13:36,800,739...36,843,837
Ensembl chr13:36,800,093...36,844,124
G
Bin1
bridging integrator 1
involved_in
ISO ISS IEA
(PMID:10412034) GO_REF:0000024 GO_REF:0000107
RGD Alzheimers_University_of_Toronto Ensembl
PMID:10412034
GO_REF:0000024 GO_REF:0000107
NCBI chr18:24,009,731...24,067,267
Ensembl chr18:24,009,653...24,067,263
G
Bmp2
bone morphogenetic protein 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:99414 (PMID:10486560), (PMID:15882580)
Ensembl RGD
PMID:10486560 PMID:15882580
GO_REF:0000107
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
G
Clcf1
cardiotrophin-like cytokine factor 1
involved_in
ISO
(MGI:5009184|PMID:12090754)
RGD
PMID:12090754
MGI:5009184
NCBI chr 1:201,507,763...201,517,607
Ensembl chr 1:201,507,859...201,517,605
G
Hes1
hes family bHLH transcription factor 1
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:2655020|PMID:12666205) GO_REF:0000024
Ensembl RGD UniProt
PMID:12666205
GO_REF:0000024 GO_REF:0000107 MGI:2655020
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
G
Id2
inhibitor of DNA binding 2
acts_upstream_of_or_within
ISO
MGI:3830733 (PMID:19109490)
RGD
PMID:19109490
NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400
G
Il1b
interleukin 1 beta
IDA
RGD
PMID:22270046
RGD:6482669
NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
G
Il6st
interleukin 6 cytokine family signal transducer
acts_upstream_of_or_within
ISO
(PMID:10486560)
RGD
PMID:10486560
NCBI chr 2:44,065,979...44,106,255
Ensembl chr 2:44,066,130...44,109,936
G
Lif
LIF, interleukin 6 family cytokine
acts_upstream_of_or_within
ISO
(PMID:10486560)
RGD
PMID:10486560
NCBI chr14:79,131,049...79,140,486
Ensembl chr14:79,134,574...79,140,482
G
Mag
myelin-associated glycoprotein
IDA
RGD
PMID:19349915
RGD:9685287
NCBI chr 1:86,148,227...86,163,726
Ensembl chr 1:86,148,228...86,163,656
G
Notch1
notch receptor 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:2655020|PMID:12666205)
UniProt RGD
PMID:12666205
GO_REF:0000024 MGI:2655020
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Prpf19
pre-mRNA processing factor 19
IMP
RGD
PMID:23769735
RGD:10045891
NCBI chr 1:207,541,582...207,552,664
Ensembl chr 1:207,541,595...207,552,662
G
Serpine2
serpin family E member 2
involved_in
ISO IEA
(PMID:1691280) GO_REF:0000107
RGD Ensembl
PMID:1691280
GO_REF:0000107
NCBI chr 9:81,124,746...81,188,866
Ensembl chr 9:81,124,804...81,188,826
G
Shh
sonic hedgehog signaling molecule
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:10357934)
Ensembl RGD
PMID:10357934
GO_REF:0000107
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Adcy10
adenylate cyclase 10
IMP
RGD
PMID:22649251
RGD:329347828
NCBI chr13:77,747,752...77,833,952
Ensembl chr13:77,768,468...77,833,951
G
Adnp
activity-dependent neuroprotector homeobox
IDA
RGD
PMID:19047645
RGD:2312772
NCBI chr 3:156,886,921...156,921,500
Ensembl chr 3:156,891,381...156,917,312
G
Anapc2
anaphase promoting complex subunit 2
IMP
RGD
PMID:19167333
RGD:2306262
NCBI chr 3:8,086,434...8,098,182
Ensembl chr 3:8,086,462...8,098,178
G
Apoe
apolipoprotein E
IDA
RGD
PMID:21040802
RGD:6904146
NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
G
Arhgap32
Rho GTPase activating protein 32
IMP
RGD
PMID:23226367
RGD:151665335
NCBI chr 8:30,421,269...30,681,653
Ensembl chr 8:30,421,515...30,678,454
G
Atp5mc1
ATP synthase membrane subunit c locus 1
IMP
RGD
PMID:22209705
RGD:13800744
NCBI chr10:81,024,056...81,026,780
Ensembl chr10:81,023,925...81,027,124 Ensembl chr10:81,023,925...81,027,124
G
Bdnf
brain-derived neurotrophic factor
NOT|acts_upstream_of_or_within
ISO
(PMID:24573299)
RGD
PMID:24573299
NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
G
Cdh4
cadherin 4
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:14586016)
Ensembl RGD
PMID:14586016
GO_REF:0000107
NCBI chr 3:166,525,092...167,003,380
Ensembl chr 3:166,525,099...167,003,371
G
Cdkl5
cyclin-dependent kinase-like 5
involved_in
IMP IBA
PMID:20861382 GO_REF:0000033
GO_Central
PMID:20861382
GO_REF:0000033, RGD:8554575
NCBI chr X:33,757,605...33,988,075
Ensembl chr X:33,821,257...33,986,582
G
Cyfip1
cytoplasmic FMR1 interacting protein 1
IMP
RGD
PMID:16260607
RGD:11557987
NCBI chr 1:106,710,924...106,799,393
Ensembl chr 1:106,711,016...106,799,386
G
Dbn1
drebrin 1
involved_in
IMP IBA IEA
GO_REF:0000033 GO_REF:0000118
GO_Central TreeGrafter RGD
PMID:19222710
GO_REF:0000033 GO_REF:0000118, RGD:10395284
NCBI chr17:9,150,608...9,164,982
Ensembl chr17:9,150,659...9,164,984
G
Dbnl
drebrin-like
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr14:80,666,115...80,681,155
Ensembl chr14:80,666,124...80,681,155
G
Disc1
DISC1 scaffold protein
IMP
RGD
PMID:17202468
RGD:4107038
NCBI chr19:53,014,201...53,223,617
Ensembl chr19:53,014,616...53,219,778
G
Eif2b2
eukaryotic translation initiation factor 2B subunit beta
IMP
RGD
PMID:23616526
RGD:11041877
NCBI chr 6:104,866,926...104,873,351
Ensembl chr 6:104,866,753...104,873,353
G
Eif4g2
eukaryotic translation initiation factor 4, gamma 2
IMP
RGD
PMID:23616526
RGD:11041877
NCBI chr 1:165,181,433...165,193,583
Ensembl chr 1:165,181,434...165,193,588
G
Ep300
E1A binding protein p300
IMP
RGD
PMID:19339625
RGD:2308917
NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088 Ensembl chr 7:113,106,247...113,136,088
G
Fn1
fibronectin 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:12879062)
Ensembl RGD
PMID:12879062
GO_REF:0000107
NCBI chr 9:73,196,044...73,264,695
Ensembl chr 9:73,196,044...73,264,678
G
Fxn
frataxin
IMP
RGD
PMID:18809400
RGD:2306797
NCBI chr 1:221,874,007...221,897,543
Ensembl chr 1:221,872,420...221,897,540
G
Gdi1
GDP dissociation inhibitor 1
IMP
RGD
PMID:9620768
RGD:13208823
NCBI chr X:152,087,611...152,094,274
Ensembl chr X:152,087,444...152,094,272
G
Golga4
golgin A4
involved_in
ISO
(PMID:22705394)
RGD
PMID:22705394
NCBI chr 8:118,208,200...118,285,003
G
Gsk3b
glycogen synthase kinase 3 beta
acts_upstream_of_or_within
ISO
MGI:106658|MGI:98927 (PMID:24623780)
RGD
PMID:24623780
NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
G
Ilk
integrin-linked kinase
IMP
shorter axons following Ilk inhibition or knock-down
RGD
PMID:17490631
RGD:2301744
NCBI chr 1:160,088,839...160,095,140
Ensembl chr 1:160,088,897...160,095,140
G
Islr2
immunoglobulin superfamily containing leucine-rich repeat 2
involved_in
ISO IBA
(MGI:4411944|PMID:19755105) GO_REF:0000033
RGD GO_Central
PMID:19755105
GO_REF:0000033 MGI:4411944
NCBI chr 8:58,608,165...58,616,246
Ensembl chr 8:58,608,709...58,614,650
G
L1cam
L1 cell adhesion molecule
involved_in
IMP
PMID:18519736
UniProt
PMID:18519736
RGD:10054086
NCBI chr X:151,597,270...151,623,776
Ensembl chr X:151,597,277...151,623,857
G
Limk1
LIM domain kinase 1
involved_in acts_upstream_of_or_within
ISS ISO IEA
GO_REF:0000024 MGI:1921382 (PMID:16204183) GO_REF:0000107
UniProt RGD Ensembl
PMID:16204183
GO_REF:0000024 GO_REF:0000107
NCBI chr12:22,026,697...22,060,605
Ensembl chr12:22,026,672...22,060,606
G
Lrp1
LDL receptor related protein 1
IMP
RGD
PMID:21040802
RGD:6904146
NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
G
Macf1
microtubule-actin crosslinking factor 1
involved_in
ISO
(PMID:22705394)
RGD
PMID:22705394
NCBI chr 5:135,623,734...135,949,097
Ensembl chr 5:135,623,742...135,945,905
G
Map1b
microtubule-associated protein 1B
IMP
RGD
PMID:8838670
RGD:2304034
NCBI chr 2:30,817,261...30,910,458
Ensembl chr 2:30,817,261...30,910,317
G
Map3k13
mitogen-activated protein kinase kinase kinase 13
involved_in
ISO
(MGI:5810221|PMID:27511108)
RGD
PMID:27511108
MGI:5810221
NCBI chr11:79,094,087...79,235,181
Ensembl chr11:79,097,247...79,235,181
G
Mapt
microtubule-associated protein tau
involved_in
ISO ISS
(PMID:1389180) GO_REF:0000024
RGD UniProt
PMID:1389180
GO_REF:0000024
NCBI chr10:89,138,644...89,236,137
Ensembl chr10:89,138,627...89,236,129
G
Myo5b
myosin Vb
IMP
RGD
PMID:23770993
RGD:11533641
NCBI chr18:68,038,759...68,341,568
Ensembl chr18:68,038,759...68,338,745
G
Ndel1
nudE neurodevelopment protein 1-like 1
IMP
RGD
PMID:17202468
RGD:4107038
NCBI chr10:53,505,628...53,582,025
Ensembl chr10:53,516,491...53,570,907
G
Ngf
nerve growth factor
acts_upstream_of_or_within
ISO
(PMID:18052984), (PMID:8861722)
RGD
PMID:8861722 PMID:18052984
NCBI chr 2:189,901,058...189,954,452
Ensembl chr 2:189,901,058...189,954,452
G
Ntn1
netrin 1
involved_in acts_upstream_of_or_within
IDA ISO IEA
PMID:23453953 (PMID:10704383) GO_REF:0000107
RGD Ensembl
PMID:10704383 PMID:23453953
GO_REF:0000107, RGD:10054078
NCBI chr10:52,899,933...53,098,591
Ensembl chr10:52,899,934...53,085,326
G
Pafah1b1
platelet-activating factor acetylhydrolase 1b, regulatory subunit 1
IMP
RGD
PMID:17522326 PMID:17202468
RGD:4107033 , RGD:4107038
NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808
G
Pak1
p21 (RAC1) activated kinase 1
IMP
RGD
PMID:23453953
RGD:10054078
NCBI chr 1:152,111,172...152,226,390
Ensembl chr 1:152,111,188...152,226,383
G
Pou4f2
POU class 4 homeobox 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:2429619|PMID:10357904)
UniProt RGD
PMID:10357904
GO_REF:0000024 MGI:2429619
NCBI chr19:29,486,686...29,490,327
Ensembl chr19:29,486,686...29,490,327
G
Rpl4
ribosomal protein L4
IMP
RGD
PMID:10964612
RGD:11039443
NCBI chr 8:64,671,177...64,676,301
Ensembl chr 8:64,671,160...64,676,306
G
Rufy3
RUN and FYVE domain containing 3
involved_in
ISS ISO
GO_REF:0000024 (MGI:5603691|PMID:24720729)
UniProt RGD
PMID:24720729
GO_REF:0000024 MGI:5603691
NCBI chr14:19,431,530...19,506,476
Ensembl chr14:19,432,524...19,507,004
G
Sema7a
semaphorin 7A (John Milton Hagen blood group)
involved_in acts_upstream_of_or_within
ISO IBA
(PMID:12879062) GO_REF:0000033
RGD GO_Central
PMID:12879062
GO_REF:0000033
NCBI chr 8:58,348,448...58,370,536
Ensembl chr 8:58,348,448...58,370,536
G
Shtn1
shootin 1
involved_in
IDA
PMID:23453953 PMID:18519736
UniProt
PMID:23453953 PMID:18519736
RGD:10054078 , RGD:10054086
NCBI chr 1:258,121,966...258,225,861
Ensembl chr 1:258,121,968...258,228,265
G
Smurf1
SMAD specific E3 ubiquitin protein ligase 1
IMP
RGD
PMID:23226367
RGD:151665335
NCBI chr12:9,635,009...9,726,520
Ensembl chr12:9,635,025...9,726,519
G
Srf
serum response factor
acts_upstream_of_or_within
ISO
MGI:1861437|MGI:3522206|MGI:98927 (PMID:24623780)
RGD
PMID:24623780
NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733
G
Tnfrsf12a
TNF receptor superfamily member 12A
acts_upstream_of_or_within
ISO
(PMID:14573547)
RGD
PMID:14573547
NCBI chr10:12,707,077...12,709,071
Ensembl chr10:12,689,890...12,709,045
G
Trpc5
transient receptor potential cation channel, subfamily C, member 5
IMP
RGD
PMID:21984481
RGD:10043835
NCBI chr X:107,946,163...108,230,991
Ensembl chr X:107,939,131...108,230,991
G
Trpv2
transient receptor potential cation channel, subfamily V, member 2
involved_in
IEA ISO
GO_REF:0000107 (MGI:4442533|PMID:20357111)
Ensembl RGD
PMID:20357111
GO_REF:0000107 MGI:4442533
NCBI chr10:47,265,524...47,294,263
Ensembl chr10:47,272,931...47,294,260
G
Twf2
twinfilin actin-binding protein 2
involved_in
ISO
(PMID:17910947)
RGD
PMID:17910947
NCBI chr 8:106,845,253...106,858,298
Ensembl chr 8:106,845,253...106,858,298
G
Zfyve27
zinc finger FYVE-type containing 27
involved_in
ISS IBA IEA ISO
GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 GO_REF:0000107 (MGI:5606143|PMID:24251978)
UniProt GO_Central TreeGrafter Ensembl RGD
PMID:24251978
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:5606143
NCBI chr 1:240,979,831...241,003,193
Ensembl chr 1:240,979,842...241,003,193
G
Bmpr2
bone morphogenetic protein receptor type 2
involved_in
ISO
UniProtKB:O35607 (MGI:5551355|PMID:24052814)
RGD
PMID:24052814
MGI:5551355
NCBI chr 9:61,192,718...61,307,280
Ensembl chr 9:61,190,566...61,301,809
G
Cxcl12
C-X-C motif chemokine ligand 12
IMP
RGD
PMID:18701697
RGD:2306571
NCBI chr 4:150,388,326...150,401,173
Ensembl chr 4:150,388,325...150,401,168
G
Dscam
DS cell adhesion molecule
involved_in
ISO IBA IEA IMP
(PMID:18585357) GO_REF:0000033 GO_REF:0000107 (MGI:3829111|PMID:18585357)
RGD GO_Central Ensembl
PMID:18585357 PMID:18585357
GO_REF:0000033 GO_REF:0000107 MGI:3829111 , RGD:8553710
NCBI chr11:35,921,924...36,507,100
Ensembl chr11:35,926,896...36,507,415
G
Megf8
multiple EGF-like-domains 8
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:5551355|PMID:24052814) GO_REF:0000107
CAFA RGD Ensembl
PMID:24052814
GO_REF:0000024 GO_REF:0000107 MGI:5551355
NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613
G
Nrp1
neuropilin 1
involved_in
ISO
(MGI:5141569|PMID:21658587)
RGD
PMID:21658587
MGI:5141569
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Sema5a
semaphorin 5A
involved_in
IMP
PMID:15603739
UniProt
PMID:15603739
RGD:8553809
NCBI chr 2:83,309,843...83,741,084
Ensembl chr 2:83,309,843...83,741,084
G
Vegfa
vascular endothelial growth factor A
NOT|involved_in
ISO
(MGI:5141569|PMID:21658587)
RGD
PMID:21658587
MGI:5141569
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
G
Lrp1
LDL receptor related protein 1
IDA
RGD
PMID:23867460
RGD:13800520
NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
G
Ntrk3
neurotrophic receptor tyrosine kinase 3
acts_upstream_of_or_within
ISO
MGI:97380 (PMID:16142215)
RGD
PMID:16142215
NCBI chr 1:132,116,472...132,503,849
Ensembl chr 1:132,132,849...132,503,286
G
Ache
acetylcholinesterase
IMP
RGD
PMID:12799140
RGD:1299197
NCBI chr12:19,406,133...19,413,713
Ensembl chr12:19,407,360...19,413,651
G
Amigo1
adhesion molecule with Ig like domain 1
involved_in
IDA
PMID:12629050
UniProt
PMID:12629050
RGD:634626
NCBI chr 2:195,823,138...195,828,593
Ensembl chr 2:195,823,042...195,829,585
G
Braf
B-Raf proto-oncogene, serine/threonine kinase
acts_upstream_of_or_within
ISO
MGI:1346866|MGI:1346867 (PMID:24733831)
RGD
PMID:24733831
NCBI chr 4:68,375,484...68,510,652
Ensembl chr 4:68,384,649...68,510,463
G
Chodl
chondrolectin
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr11:17,654,137...17,676,450
Ensembl chr11:17,654,206...17,676,441
G
Cyfip1
cytoplasmic FMR1 interacting protein 1
IMP
RGD
PMID:16260607
RGD:11557987
NCBI chr 1:106,710,924...106,799,393
Ensembl chr 1:106,711,016...106,799,386
G
Dixdc1
DIX domain containing 1
IMP
RGD
PMID:19339625
RGD:2308917
NCBI chr 8:51,007,835...51,081,191
Ensembl chr 8:51,007,838...51,081,090
G
Golga2
golgin A2
acts_upstream_of_or_within
ISO
(PMID:21111240)
RGD
PMID:21111240
NCBI chr 3:15,583,862...15,604,279
Ensembl chr 3:15,584,039...15,604,279
G
Ilk
integrin-linked kinase
IMP
more cells without axons following Ilk inhibition or knock-down
RGD
PMID:17490631
RGD:2301744
NCBI chr 1:160,088,839...160,095,140
Ensembl chr 1:160,088,897...160,095,140
G
Map2k1
mitogen activated protein kinase kinase 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1346867|MGI:88190 (PMID:24733831)
Ensembl RGD
PMID:24733831
GO_REF:0000107
NCBI chr 8:64,683,449...64,754,900
Ensembl chr 8:64,683,449...64,755,147
G
Map2k2
mitogen activated protein kinase kinase 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1346866|MGI:88190 (PMID:24733831)
Ensembl RGD
PMID:24733831
GO_REF:0000107
NCBI chr 7:8,590,729...8,610,279
Ensembl chr 7:8,580,905...8,610,243
G
Map6
microtubule-associated protein 6
involved_in
IMP IBA IEA
PMID:28521134 GO_REF:0000033 GO_REF:0000118
GO_Central TreeGrafter
PMID:28521134
GO_REF:0000033 GO_REF:0000118, RGD:13441203
NCBI chr 1:153,568,020...153,634,415
Ensembl chr 1:153,568,368...153,634,414
G
Metrn
meteorin, glial cell differentiation regulator
involved_in acts_upstream_of_or_within
IBA ISO IEA
GO_REF:0000033 (PMID:15085178) GO_REF:0000118
GO_Central RGD TreeGrafter
PMID:15085178
GO_REF:0000033 GO_REF:0000118
NCBI chr10:14,816,684...14,818,702
Ensembl chr10:14,816,572...14,818,701
G
Nefl
neurofilament light chain
acts_upstream_of_or_within
ISO
(PMID:7946341)
RGD
PMID:7946341
NCBI chr15:42,301,920...42,305,793
Ensembl chr15:42,301,916...42,305,793
G
Nin
ninein
acts_upstream_of_or_within
ISO
MGI:1344407 (PMID:25741725)
RGD
PMID:25741725
NCBI chr 6:88,525,405...88,627,710
Ensembl chr 6:88,525,742...88,627,639
G
Nrdc
nardilysin convertase
involved_in
ISS ISO
GO_REF:0000024 (MGI:4414693|PMID:19935654)
UniProt RGD
PMID:19935654
GO_REF:0000024 MGI:4414693
NCBI chr 5:123,755,807...123,818,910
Ensembl chr 5:123,755,806...123,818,595
G
Ntrk2
neurotrophic receptor tyrosine kinase 2
involved_in
IMP
PMID:10985347
UniProt
PMID:10985347
RGD:8553408
NCBI chr17:5,558,992...5,870,299
Ensembl chr17:5,559,043...5,869,136
G
Picalm
phosphatidylinositol binding clathrin assembly protein
IMP
RGD
PMID:18842885
RGD:8554167
NCBI chr 1:144,056,415...144,138,045
Ensembl chr 1:144,056,721...144,137,557
G
Plxna1
plexin A1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:121,737,934...121,782,901
Ensembl chr 4:121,737,945...122,024,196
G
Plxna2
plexin A2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr13:106,163,103...106,358,979
Ensembl chr13:106,163,103...106,358,979
G
Plxna3
plexin A3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr X:152,115,699...152,131,608
Ensembl chr X:152,115,819...152,131,603
G
Plxna4
plexin A4
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:60,720,246...61,162,206
Ensembl chr 4:60,720,255...61,162,206
G
Plxnb1
plexin B1
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:109244 (PMID:15330859)
GO_Central RGD
PMID:15330859
GO_REF:0000033
NCBI chr 8:109,743,470...109,769,153
Ensembl chr 8:109,744,697...109,769,027
G
Plxnb2
plexin B2
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:109244 (PMID:15330859)
GO_Central RGD
PMID:15330859
GO_REF:0000033
NCBI chr 7:120,232,276...120,258,385
Ensembl chr 7:120,232,331...120,258,330
G
Plxnb3
plexin B3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr X:151,493,832...151,508,688
Ensembl chr X:151,494,207...151,508,674
G
Plxnc1
plexin C1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:29,390,038...29,543,985
Ensembl chr 7:29,390,048...29,543,779
G
Plxnd1
plexin D1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:149,002,786...149,043,097
Ensembl chr 4:149,002,784...149,043,244
G
Robo1
roundabout guidance receptor 1
involved_in
ISO
(PMID:12504588)
RGD
PMID:12504588
NCBI chr11:10,580,863...11,621,675
Ensembl chr11:10,580,908...11,620,203
G
Robo2
roundabout guidance receptor 2
involved_in
ISO
(PMID:12504588)
RGD
PMID:12504588
NCBI chr11:12,528,949...14,096,726
Ensembl chr11:12,528,951...13,041,536
G
Rpl4
ribosomal protein L4
IMP
RGD
PMID:10964612
RGD:11039443
NCBI chr 8:64,671,177...64,676,301
Ensembl chr 8:64,671,160...64,676,306
G
Rufy3
RUN and FYVE domain containing 3
acts_upstream_of_or_within
ISO
(PMID:24720729)
RGD
PMID:24720729
NCBI chr14:19,431,530...19,506,476
Ensembl chr14:19,432,524...19,507,004
G
Sema4d
semaphorin 4D
acts_upstream_of_or_within
ISO
MGI:2154238|MGI:2154239|MGI:97321|MGI:97383 (PMID:15330859)
RGD
PMID:15330859
NCBI chr17:13,430,324...13,537,146
Ensembl chr17:13,430,379...13,537,138
G
Shox2
SHOX homeobox 2
involved_in
ISO IEA
(MGI:4946446|PMID:21156168) GO_REF:0000107
RGD Ensembl
PMID:21156168
GO_REF:0000107 MGI:4946446
NCBI chr 2:151,217,049...151,227,180
Ensembl chr 2:151,217,552...151,227,143
G
Skil
SKI-like proto-oncogene
involved_in
IMP ISO
(PMID:16675394)
RGD
PMID:16675394 PMID:19339625
RGD:2308917
NCBI chr 2:112,247,047...112,275,176
Ensembl chr 2:112,247,051...112,275,080
G
Slitrk1
SLIT and NTRK-like family, member 1
involved_in
ISO
(PMID:23990902)
RGD
PMID:23990902
NCBI chr15:85,723,252...85,727,290
Ensembl chr15:85,724,475...85,727,509
G
Snap91
synaptosome associated protein 91
IMP
RGD
PMID:18842885
RGD:8554167
NCBI chr 8:87,738,056...87,852,690
Ensembl chr 8:87,738,824...87,852,367
G
Stk11
serine/threonine kinase 11
acts_upstream_of_or_within
ISO
MGI:1891699 (PMID:21111240)
RGD
PMID:21111240
NCBI chr 7:9,574,553...9,591,315
Ensembl chr 7:9,575,269...9,591,315
G
Stk25
serine/threonine kinase 25
acts_upstream_of_or_within
ISO
MGI:108554|MGI:1341870 (PMID:21111240)
RGD
PMID:21111240
NCBI chr 9:94,161,834...94,174,095
Ensembl chr 9:94,161,836...94,174,244
G
Tiam1
TIAM Rac1 associated GEF 1
acts_upstream_of_or_within involved_in
IMP ISO IBA
(PMID:14988728) GO_REF:0000033
RGD GO_Central
PMID:14988728 PMID:11264310
GO_REF:0000033, RGD:10043321
NCBI chr11:29,031,347...29,380,153
Ensembl chr11:29,031,348...29,159,901
G
Tiam2
TIAM Rac1 associated GEF 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:43,918,179...44,119,499
Ensembl chr 1:43,918,174...44,119,493
G
Trak1
trafficking kinesin protein 1
IMP
RGD
PMID:23395375
RGD:13208834
NCBI chr 8:120,984,445...121,139,357
Ensembl chr 8:120,984,431...121,139,367
G
Zeb2
zinc finger E-box binding homeobox 2
acts_upstream_of_or_within
ISO
MGI:2387499|MGI:2668659 (PMID:25741725)
RGD
PMID:25741725
NCBI chr 3:29,214,581...29,344,890
Ensembl chr 3:29,218,301...29,345,157
G
Atp11c
ATPase phospholipid transporting 11C
involved_in
ISO
(MGI:5002406|PMID:21423173)
RGD
PMID:21423173
MGI:5002406
NCBI chr X:138,564,459...138,752,116
Ensembl chr X:138,565,836...138,751,204
G
Bad
BCL2-associated agonist of cell death
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3029528 (PMID:12431371)
Ensembl RGD
PMID:12431371
GO_REF:0000107
NCBI chr 1:204,133,502...204,142,829
Ensembl chr 1:204,131,501...204,142,823
G
Cd27
CD27 molecule
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 4:158,030,700...158,035,862
Ensembl chr 4:158,030,703...158,035,592
G
Il2rg
interleukin 2 receptor subunit gamma
acts_upstream_of_or_within
ISO
MGI:2429736|MGI:5544783 (PMID:23918385), (PMID:9252128)
RGD
PMID:9252128 PMID:23918385
NCBI chr X:66,395,330...66,399,026
Ensembl chr X:66,392,542...66,399,823
G
Il7
interleukin 7
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:16797412)
Ensembl RGD
PMID:16797412
GO_REF:0000107
NCBI chr 2:94,235,219...94,280,075
Ensembl chr 2:94,234,766...94,280,075
G
Inpp5d
inositol polyphosphate-5-phosphatase D
involved_in acts_upstream_of_or_within
IEA ISO IBA
GO_REF:0000107 MGI:2386884 (PMID:10704460), (PMID:9620849) GO_REF:0000033
Ensembl RGD GO_Central
PMID:9620849 PMID:10704460
GO_REF:0000033 GO_REF:0000107
NCBI chr 9:88,287,680...88,392,748
Ensembl chr 9:88,287,677...88,392,746
G
Mmp14
matrix metallopeptidase 14
involved_in
ISS ISO
GO_REF:0000024 (MGI:5013661|PMID:21572390)
UniProt RGD
PMID:21572390
GO_REF:0000024 MGI:5013661
NCBI chr15:27,887,795...27,897,020
Ensembl chr15:27,887,727...27,899,864
G
Nckap1l
NCK associated protein 1 like
involved_in
ISS ISO
GO_REF:0000024 (MGI:3818191|PMID:19015308)
UniProt RGD
PMID:19015308
GO_REF:0000024 MGI:3818191
NCBI chr 7:134,577,470...134,622,928
Ensembl chr 7:134,577,482...134,622,934
G
Pcid2
PCI domain containing 2
involved_in
ISO
(MGI:4839685|PMID:20870947)
RGD
PMID:20870947
MGI:4839685
NCBI chr16:76,423,245...76,448,712
Ensembl chr16:76,423,245...76,448,712
G
Ppp2r3c
protein phosphatase 2, regulatory subunit B'', gamma
involved_in acts_upstream_of_or_within
IEA ISO IBA
GO_REF:0000107 MGI:3759678 (PMID:16129705) GO_REF:0000118 GO_REF:0000033
Ensembl RGD TreeGrafter GO_Central
PMID:16129705
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118
NCBI chr 6:72,647,025...72,670,885
Ensembl chr 6:72,647,025...72,672,491
G
Sh2d1b2
SH2 domain containing 1B2
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
NCBI chr13:82,437,418...82,461,511
Ensembl chr13:82,437,428...82,461,509
G
Spi1
Spi-1 proto-oncogene
involved_in
ISO IEA ISS
(PMID:33951726) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:33951726
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:77,059,744...77,093,730
Ensembl chr 3:77,073,012...77,092,393
G
Stat5a
signal transducer and activator of transcription 5A
acts_upstream_of_or_within
ISO
MGI:103035 (PMID:10979977)
RGD
PMID:10979977
NCBI chr10:85,785,537...85,809,869
Ensembl chr10:85,785,537...85,809,866
G
Stat5b
signal transducer and activator of transcription 5B
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:103036 (PMID:10979977)
Ensembl RGD
PMID:10979977
GO_REF:0000107
NCBI chr10:85,704,841...85,775,856
Ensembl chr10:85,705,670...85,775,668
G
Syk
spleen associated tyrosine kinase
involved_in acts_upstream_of_or_within
IEA ISO IBA
GO_REF:0000107 MGI:1857421|MGI:2384078 (PMID:7477352), (PMID:7477353) GO_REF:0000033 GO_REF:0000118 (PMID:18369315)
Ensembl RGD GO_Central TreeGrafter
PMID:7477352 PMID:7477353 PMID:18369315
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118
NCBI chr17:12,604,615...12,678,437
Ensembl chr17:12,604,619...12,661,410
G
Xbp1
X-box binding protein 1
involved_in
ISO ISS
(PMID:11460154) GO_REF:0000024
RGD UniProt
PMID:11460154
GO_REF:0000024
NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
G
Mir34a
microRNA 34a
involved_in
ISO
(PMID:24792364)
RGD
PMID:24792364
NCBI chr 5:160,533,002...160,533,103
Ensembl chr 5:160,533,002...160,533,103
G
Bmp7
bone morphogenetic protein 7
involved_in
ISO
(PMID:27923061)
RGD
PMID:27923061
NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
G
Ffar4
free fatty acid receptor 4
involved_in
ISO
(MGI:6155359|PMID:29343498)
RGD
PMID:29343498
MGI:6155359
NCBI chr 1:235,873,576...235,891,597
Ensembl chr 1:235,873,576...235,891,597
G
Fndc5
fibronectin type III domain containing 5
involved_in
ISS IEA IBA ISO
GO_REF:0000024 GO_REF:0000118 GO_REF:0000033 (MGI:5309068|PMID:22237023)
UniProt TreeGrafter GO_Central RGD
PMID:22237023
GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 MGI:5309068
NCBI chr 5:141,481,593...141,491,257
Ensembl chr 5:141,481,590...141,490,731
G
Hnrnpu
heterogeneous nuclear ribonucleoprotein U
involved_in
ISS ISO
GO_REF:0000024 (MGI:5912851|PMID:28784777)
UniProt RGD
PMID:28784777
GO_REF:0000024 MGI:5912851
NCBI chr13:90,069,058...90,086,905
Ensembl chr13:90,074,181...90,086,588
G
Mapk14
mitogen activated protein kinase 14
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:23977283)
Ensembl RGD
PMID:23977283
GO_REF:0000107
NCBI chr20:6,749,646...6,810,590
Ensembl chr20:6,749,670...6,810,589
G
Mecom
MDS1 and EVI1 complex locus
acts_upstream_of_or_within
ISO
(PMID:24703692)
RGD
PMID:24703692
NCBI chr 2:112,909,353...113,464,583
Ensembl chr 2:112,909,321...113,464,590
G
Metrnl
meteorin-like, glial cell differentiation regulator
involved_in
ISS IEA IBA ISO
GO_REF:0000024 GO_REF:0000118 GO_REF:0000033 (MGI:5574515|PMID:24906147)
UniProt TreeGrafter GO_Central RGD
PMID:24906147
GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 MGI:5574515
NCBI chr10:106,963,880...106,977,875
Ensembl chr10:106,963,880...106,977,869
G
Napepld
N-acyl phosphatidylethanolamine phospholipase D
involved_in
ISO ISS
(MGI:5641800|PMID:25757720) GO_REF:0000024
RGD UniProt
PMID:25757720
GO_REF:0000024 MGI:5641800
NCBI chr 4:13,360,532...13,398,815
Ensembl chr 4:13,361,006...13,398,748
G
Pim1
Pim-1 proto-oncogene, serine/threonine kinase
involved_in
ISS ISO
GO_REF:0000024 (MGI:5812817|PMID:27923061)
UniProt RGD
PMID:27923061
GO_REF:0000024 MGI:5812817
NCBI chr20:7,554,921...7,559,174
Ensembl chr20:7,554,921...7,559,174
G
Prdm16
PR/SET domain 16
acts_upstream_of_or_within
ISO
MGI:2135565|MGI:2669525|MGI:5564782 (PMID:24703692)
RGD
PMID:24703692
NCBI chr 5:164,879,864...165,203,986
Ensembl chr 5:164,880,587...165,203,601
G
Ptgs2
prostaglandin-endoperoxide synthase 2
involved_in
ISO
(MGI:4454608|PMID:20448152)
RGD
PMID:20448152
MGI:4454608
NCBI chr13:62,163,936...62,172,193
Ensembl chr13:62,163,932...62,172,188
G
Rreb1
ras responsive element binding protein 1
involved_in
ISO
(MGI:5812817|PMID:27923061)
RGD
PMID:27923061
MGI:5812817
NCBI chr17:26,876,687...27,002,554
Ensembl chr17:26,876,697...27,002,615
G
Six1
SIX homeobox 1
involved_in
ISO
(MGI:5812817|PMID:27923061)
RGD
PMID:27923061
MGI:5812817
NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975
G
Sox13
SRY-box transcription factor 13
involved_in
ISO
(MGI:5812817|PMID:27923061)
RGD
PMID:27923061
MGI:5812817
NCBI chr13:44,831,097...44,875,522
Ensembl chr13:44,831,085...44,875,762
G
Tfe3
transcription factor binding to IGHM enhancer 3
involved_in
ISO
(MGI:6393150|PMID:27913603)
RGD
PMID:27913603
MGI:6393150
NCBI chr X:14,729,547...14,742,830
Ensembl chr X:14,729,550...14,742,571
G
Vstm2a
V-set and transmembrane domain containing 2A
involved_in
ISO
(PMID:28052263) (MGI:5825384|PMID:28052263)
RGD
PMID:28052263
MGI:5825384
NCBI chr14:90,660,012...90,897,561
Ensembl chr14:90,660,004...90,685,656
G
Zbtb7b
zinc finger and BTB domain containing 7B
involved_in
ISO
(MGI:5912851|PMID:28784777)
RGD
PMID:28784777
MGI:5912851
NCBI chr 2:174,795,831...174,811,980
Ensembl chr 2:174,797,453...174,814,236
G
Gata5
GATA binding protein 5
involved_in
ISO
(MGI:5286818|PMID:21633169)
RGD
PMID:21633169
MGI:5286818
NCBI chr 3:167,418,563...167,426,751
Ensembl chr 3:167,418,565...167,426,751
G
Mir342
microRNA 342
involved_in
ISO
(PMID:26857067)
RGD
PMID:26857067
NCBI chr 6:127,565,269...127,565,367
Ensembl chr 6:127,565,269...127,565,367
G
Acvr1
activin A receptor type 1
involved_in
ISO
(MGI:3610266|PMID:16140292)
RGD
PMID:16140292
MGI:3610266
NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241
G
Emp2
epithelial membrane protein 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:6443292|PMID:30773261)
UniProt RGD
PMID:30773261
GO_REF:0000024 MGI:6443292
NCBI chr10:5,360,073...5,394,734
Ensembl chr10:5,360,073...5,394,733
G
Jag1
jagged canonical Notch ligand 1
involved_in
IGI
PMID:20951801
BHF-UCL
PMID:20951801
RGD:13601997
NCBI chr 3:124,406,783...124,442,220
Ensembl chr 3:124,406,794...124,442,209
G
Notch1
notch receptor 1
involved_in
IGI
PMID:20951801
BHF-UCL
PMID:20951801
RGD:13601997
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISO
(MGI:5300829|PMID:22186728)
RGD
PMID:22186728
MGI:5300829
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
G
Arrb2
arrestin, beta 2
involved_in
ISO IEA
(MGI:5784966|PMID:24974728) GO_REF:0000107
RGD Ensembl
PMID:24974728
GO_REF:0000107 MGI:5784966
NCBI chr10:55,146,887...55,154,854
Ensembl chr10:55,146,818...55,154,850
G
Efnb2
ephrin B2
involved_in
ISO
(MGI:3701380|PMID:17336907)
RGD
PMID:17336907
MGI:3701380
NCBI chr16:80,783,389...80,827,420
Ensembl chr16:80,783,417...80,824,391
G
Gsk3b
glycogen synthase kinase 3 beta
involved_in
ISO
(MGI:5784966|PMID:24974728)
RGD
PMID:24974728
MGI:5784966
NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
G
Kat2a
lysine acetyltransferase 2A
IMP
RGD
PMID:20835911
RGD:8693751
NCBI chr10:85,632,216...85,640,561
Ensembl chr10:85,632,216...85,640,166
G
Mef2c
myocyte enhancer factor 2C
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:3830899|PMID:16680724) (PMID:9857019)
UniProt Ensembl RGD
PMID:9857019 PMID:16680724
GO_REF:0000024 GO_REF:0000107 MGI:3830899
NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
G
Mir1
microRNA 1
involved_in
ISO
(PMID:20081117), (PMID:23939491)
RGD
PMID:20081117 PMID:23939491
NCBI chr18:1,887,537...1,887,623
G
Mir1b
microRNA 1b
involved_in
ISO
(PMID:20081117), (PMID:23939491)
RGD
PMID:20081117 PMID:23939491
NCBI chr 3:167,487,117...167,487,201
Ensembl chr 3:167,487,117...167,487,201
G
Mir204
microRNA 204
involved_in
ISO
(PMID:22982025)
RGD
PMID:22982025
NCBI chr 1:220,316,931...220,317,040
Ensembl chr 1:220,316,931...220,317,040
G
Mir499a
microRNA 499a
involved_in
ISO
(PMID:20081117)
RGD
PMID:20081117
NCBI chr 3:144,110,469...144,110,533
Ensembl chr 3:144,110,469...144,110,533
G
Myocd
myocardin
involved_in
IEA ISO
GO_REF:0000107 (PMID:18451334)
Ensembl RGD
PMID:18451334
GO_REF:0000107
NCBI chr10:49,833,219...49,928,806
Ensembl chr10:49,836,641...49,927,627
G
Nrg1
neuregulin 1
involved_in
ISO
(MGI:3701380|PMID:17336907)
RGD
PMID:17336907
MGI:3701380
NCBI chr16:59,250,658...60,304,519
Ensembl chr16:59,250,854...60,296,884
G
Tgfb1
transforming growth factor, beta 1
involved_in
ISO
(PMID:25163461)
RGD
PMID:25163461
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
G
Wnt3a
Wnt family member 3A
acts_upstream_of
ISO
(PMID:20559569)
RGD
PMID:20559569
NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324
G
Bmp4
bone morphogenetic protein 4
involved_in
ISO IEA ISS
(PMID:20702560) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:20702560
GO_REF:0000024 GO_REF:0000107
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Gper1
G protein-coupled estrogen receptor 1
involved_in
ISO IEA
(PMID:23840305) GO_REF:0000107
RGD Ensembl
PMID:23840305
GO_REF:0000107
NCBI chr12:15,217,217...15,222,679
Ensembl chr12:15,217,442...15,221,889
G
Dhx36
DEAH-box helicase 36
involved_in
ISS ISO
GO_REF:0000024 (MGI:6201954|PMID:26489465)
UniProt RGD
PMID:26489465
GO_REF:0000024 MGI:6201954
NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572
G
Nkx2-5
NK2 homeobox 5
involved_in
IEA ISO
GO_REF:0000107 (MGI:3784761|PMID:11889119)
Ensembl RGD
PMID:11889119
GO_REF:0000107 MGI:3784761
NCBI chr10:16,340,428...16,347,004
Ensembl chr10:16,344,159...16,346,934
G
Tbx5
T-box transcription factor 5
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:11431700)
UniProt Ensembl RGD
PMID:11431700
GO_REF:0000024 GO_REF:0000107
NCBI chr12:36,686,344...36,739,253
Ensembl chr12:36,688,014...36,734,885
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:15896309)
AgBase RGD
PMID:15896309
GO_REF:0000024
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
G
Abi3bp
ABI family member 3 binding protein
involved_in
ISO
(MGI:6101245|PMID:25296984)
RGD
PMID:25296984
MGI:6101245
NCBI chr11:43,912,187...44,128,888
Ensembl chr11:43,913,043...44,128,929
G
Mir133a1
microRNA 133a-1
involved_in
ISO
(PMID:23069713)
RGD
PMID:23069713
NCBI chr18:1,885,082...1,885,168
G
Mir3582
microRNA 3582
involved_in
ISO
(PMID:23069713)
RGD
PMID:23069713
NCBI chr18:1,885,063...1,885,180
Ensembl chr18:1,885,063...1,885,180
G
Cd83
CD83 molecule
acts_upstream_of_or_within
ISO
MGI:3055293 (PMID:15322158)
RGD
PMID:15322158
NCBI chr17:20,887,309...20,907,009
Ensembl chr17:20,887,309...20,907,083
G
Foxp3
forkhead box P3
acts_upstream_of_or_within
ISO
(PMID:17028180)
RGD
PMID:17028180
NCBI chr X:14,908,494...14,924,994
Ensembl chr X:14,908,494...14,923,838
G
Nckap1l
NCK associated protein 1 like
involved_in
ISS ISO
GO_REF:0000024 (MGI:3818191|PMID:19015308)
UniProt RGD
PMID:19015308
GO_REF:0000024 MGI:3818191
NCBI chr 7:134,577,470...134,622,928
Ensembl chr 7:134,577,482...134,622,934
G
Sash3
SAM and SH3 domain containing 3
acts_upstream_of_or_within
ISO
MGI:3716944 (PMID:16227612)
RGD
PMID:16227612
NCBI chr X:127,326,815...127,341,521
Ensembl chr X:127,326,859...127,341,519
G
Socs1
suppressor of cytokine signaling 1
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:6140589|PMID:24880459) GO_REF:0000024
Ensembl RGD UniProt
PMID:24880459
GO_REF:0000024 GO_REF:0000107 MGI:6140589
NCBI chr10:4,882,651...4,884,342
Ensembl chr10:4,882,560...4,884,383
G
Tnfsf4
TNF superfamily member 4
involved_in
ISO
(MGI:4819294|PMID:20639485)
RGD
PMID:20639485
MGI:4819294
NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788
G
Zbtb7b
zinc finger and BTB domain containing 7B
involved_in
ISO
(MGI:6140589|PMID:24880459)
RGD
PMID:24880459
MGI:6140589
NCBI chr 2:174,795,831...174,811,980
Ensembl chr 2:174,797,453...174,814,236
G
Foxp3
forkhead box P3
acts_upstream_of_or_within
ISO
MGI:1857034|MGI:2654936|MGI:3696705 (PMID:12612578), (PMID:16275384), (PMID:16301745), (PMID:18573908)
RGD
PMID:12612578 PMID:16275384 PMID:16301745 PMID:18573908
NCBI chr X:14,908,494...14,924,994
Ensembl chr X:14,908,494...14,923,838
G
Gimap5
GTPase, IMAP family member 5
IMP
RGD
PMID:15778366
RGD:2303772
NCBI chr 4:77,693,417...77,701,025
Ensembl chr 4:77,687,564...77,703,086
G
Il2rg
interleukin 2 receptor subunit gamma
acts_upstream_of_or_within
ISO
MGI:1857455 (PMID:16227984)
RGD
PMID:16227984
NCBI chr X:66,395,330...66,399,026
Ensembl chr X:66,392,542...66,399,823
G
Klhl25
kelch-like family member 25
involved_in
ISO ISS
(PMID:34491895) (MGI:6765767|PMID:34491895) GO_REF:0000024
RGD UniProt
PMID:34491895
GO_REF:0000024 MGI:6765767
NCBI chr 1:129,724,894...129,750,142
Ensembl chr 1:129,722,026...129,750,227
G
RT1-Da
RT1 class II, locus Da
involved_in
ISO
(PMID:28467828)
RGD
PMID:28467828
NCBI chr20:4,513,464...4,518,457
Ensembl chr20:4,512,911...4,518,455
G
RT1-Db1
RT1 class II, locus Db1
involved_in
ISO
(PMID:28467828)
RGD
PMID:28467828
NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258
G
Ifng
interferon gamma
involved_in
ISO
(PMID:20209097)
RGD
PMID:20209097
NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375
G
Lgals9
galectin 9
involved_in
ISO
(PMID:20209097)
RGD
PMID:20209097
NCBI chr10:63,907,018...63,930,224
Ensembl chr10:63,907,018...63,930,045
G
Cbfb
core-binding factor subunit beta
involved_in
ISO
(MGI:3772948|PMID:18258917)
RGD
PMID:18258917
MGI:3772948
NCBI chr19:33,049,162...33,092,752
Ensembl chr19:33,049,172...33,092,751
G
Lilrb4
leukocyte immunoglobulin like receptor B4
involved_in
ISO
(PMID:18420485)
RGD
PMID:18420485
NCBI chr 1:69,805,020...69,810,628
Ensembl chr 1:69,805,250...69,810,660
G
Nckap1l
NCK associated protein 1 like
involved_in
ISS ISO
GO_REF:0000024 (MGI:3818191|PMID:19015308)
UniProt RGD
PMID:19015308
GO_REF:0000024 MGI:3818191
NCBI chr 7:134,577,470...134,622,928
Ensembl chr 7:134,577,482...134,622,934
G
Runx1
RUNX family transcription factor 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:3772948|PMID:18258917)
UniProt RGD
PMID:18258917
GO_REF:0000024 MGI:3772948
NCBI chr11:31,839,880...32,074,427
Ensembl chr11:31,843,764...32,074,542
G
Runx3
RUNX family transcription factor 3
involved_in
ISO
(MGI:3772948|PMID:18258917)
RGD
PMID:18258917
MGI:3772948
NCBI chr 5:147,360,587...147,419,161
Ensembl chr 5:147,360,994...147,419,156
G
Apc
APC regulator of WNT signaling pathway
acts_upstream_of_or_within
ISO
MGI:1856318|MGI:1857966 (PMID:15198980), (PMID:16709231)
RGD
PMID:15198980 PMID:16709231
NCBI chr18:25,828,558...25,925,511
Ensembl chr18:25,864,222...25,922,696
G
Ar
androgen receptor
involved_in
IEA ISO
GO_REF:0000107 (PMID:14521927)
Ensembl RGD
PMID:14521927
GO_REF:0000107
NCBI chr X:63,104,771...63,273,934
Ensembl chr X:63,104,771...63,273,925
G
Btc
betacellulin
IMP
RGD
PMID:18439098
RGD:2306975
NCBI chr14:16,708,447...16,746,961
Ensembl chr14:16,707,982...16,747,049
G
Ccn1
cellular communication network factor 1
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:9441684)
GO_Central RGD
PMID:9441684
GO_REF:0000033
NCBI chr 2:234,562,410...234,565,370
Ensembl chr 2:234,562,408...234,565,484
G
Ccn2
cellular communication network factor 2
involved_in
ISO IBA IEA
(PMID:20008146) GO_REF:0000033 GO_REF:0000107
RGD GO_Central Ensembl
PMID:20008146
GO_REF:0000033 GO_REF:0000107
NCBI chr 1:20,802,199...20,805,315
Ensembl chr 1:20,802,199...20,805,734
G
Ccn3
cellular communication network factor 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:86,094,000...86,101,022
Ensembl chr 7:86,094,000...86,101,019
G
Ccn4
cellular communication network factor 4
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:98,645,238...98,677,253
Ensembl chr 7:98,645,182...98,677,248
G
Ccn5
cellular communication network factor 5
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:152,491,247...152,502,639
Ensembl chr 3:152,491,220...152,502,636
G
Ccn6
cellular communication network factor 6
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr20:42,569,309...42,585,126
Ensembl chr20:42,569,309...42,585,126
G
Ccne1
cyclin E1
IDA
RGD
PMID:15642789
RGD:2289291
NCBI chr 1:90,781,947...90,791,188
Ensembl chr 1:90,781,949...90,791,101
G
Cdx2
caudal type homeo box 2
acts_upstream_of_or_within
ISO
MGI:5308967 (PMID:16325584), (PMID:22190642)
RGD
PMID:16325584 PMID:22190642
NCBI chr12:7,726,798...7,733,142
Ensembl chr12:7,726,798...7,733,142
G
Clu
clusterin
IMP
RGD
PMID:16411126
RGD:1582421
NCBI chr15:40,161,068...40,200,315
Ensembl chr15:40,174,617...40,200,315
G
Dlx1
distal-less homeobox 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:5316576|PMID:21875655)
UniProt RGD
PMID:21875655
GO_REF:0000024 MGI:5316576
NCBI chr 3:56,356,190...56,360,780
Ensembl chr 3:56,356,190...56,360,780
G
Dlx2
distal-less homeobox 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:5316576|PMID:21875655)
UniProt RGD
PMID:21875655
GO_REF:0000024 MGI:5316576
NCBI chr 3:56,370,238...56,373,581
Ensembl chr 3:56,370,483...56,373,597
G
Edn3
endothelin 3
acts_upstream_of_or_within
ISO
UniProtKB:P39905 (PMID:22897442)
RGD
PMID:22897442
NCBI chr 3:163,562,307...163,586,636
Ensembl chr 3:163,562,520...163,585,093
G
Fgfr1
Fibroblast growth factor receptor 1
involved_in
IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350
G
Gata3
GATA binding protein 3
acts_upstream_of_or_within
ISO
MGI:2181200 (PMID:19623612)
RGD
PMID:19623612
NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
G
Gdnf
glial cell derived neurotrophic factor
acts_upstream_of_or_within
ISO
UniProtKB:P14138 (PMID:22897442)
RGD
PMID:22897442
NCBI chr 2:56,894,022...56,919,935
Ensembl chr 2:56,895,010...56,917,209
G
Ghr
growth hormone receptor
IEP TAS
RGD
PMID:12162495 PMID:2722883
RGD:728761 , RGD:728551
NCBI chr 2:52,541,452...52,804,960
Ensembl chr 2:52,542,594...52,804,735
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Glp1r
glucagon-like peptide 1 receptor
IMP
RGD
PMID:10580413
RGD:1624356
NCBI chr20:8,972,004...9,010,241
Ensembl chr20:8,972,004...9,010,241
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Gsk3b
glycogen synthase kinase 3 beta
involved_in
ISO IEA
(PMID:28122350) GO_REF:0000107
RGD Ensembl
PMID:28122350
GO_REF:0000107
NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
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Hsp90ab1
heat shock protein 90 alpha family class B member 1
involved_in
ISO IEA
(PMID:18239673) GO_REF:0000107
RGD Ensembl
PMID:18239673
GO_REF:0000107
NCBI chr 9:15,432,986...15,438,358
Ensembl chr 9:15,433,691...15,438,488
G
Insm1
INSM transcriptional repressor 1
involved_in
ISO
(MGI:3772428|PMID:18094025)
RGD
PMID:18094025
MGI:3772428
NCBI chr 3:133,640,030...133,642,963
Ensembl chr 3:133,639,580...133,643,003
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Isl1
ISL LIM homeobox 1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:5636080|PMID:25775587)
UniProt Ensembl RGD
PMID:25775587
GO_REF:0000024 GO_REF:0000107 MGI:5636080
NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584
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Jak2
Janus kinase 2
IMP
differentiation of pancreatic beta cells from dedifferentiated exocrine acinar cells in vitro
RGD
PMID:16514419
RGD:1641813
NCBI chr 1:226,995,334...227,054,381
Ensembl chr 1:226,995,334...227,054,189
G
Junb
JunB proto-oncogene, AP-1 transcription factor subunit
acts_upstream_of_or_within
ISO
(PMID:11456449)
RGD
PMID:11456449
NCBI chr19:23,176,265...23,178,049
Ensembl chr19:23,176,294...23,178,035
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Mapk9
mitogen-activated protein kinase 9
IMP
RGD
PMID:16006144
RGD:2293486
NCBI chr10:34,169,661...34,211,138
Ensembl chr10:34,169,675...34,210,178
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Neurod1
neuronal differentiation 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:2158684|PMID:11861467), (MGI:5009210|PMID:9512516)
UniProt RGD
PMID:9512516 PMID:11861467
GO_REF:0000024 MGI:2158684 MGI:5009210
NCBI chr 3:64,359,554...64,363,526
Ensembl chr 3:64,359,395...64,363,649
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Neurod4
neuronal differentiation 4
involved_in
IMP ISO
(MGI:2158684|PMID:11861467)
RGD
PMID:11861467 PMID:15345241
MGI:2158684 , RGD:2311603
NCBI chr 7:7,090,048...7,102,018
Ensembl chr 7:7,090,045...7,102,030
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Neurog3
neurogenin 3
IEP
RGD
PMID:16514419
RGD:1641813
NCBI chr20:30,079,780...30,081,262
Ensembl chr20:30,079,780...30,081,262
G
Nf2
NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:23863479)
Ensembl RGD
PMID:23863479
GO_REF:0000107
NCBI chr14:79,627,399...79,710,709
Ensembl chr14:79,627,399...79,710,667
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Pa2g4
proliferation-associated 2G4
involved_in
IDA
PMID:16832058
UniProt
PMID:16832058
RGD:10047374
NCBI chr 7:984,795...992,264
Ensembl chr 7:983,971...992,331
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Pou4f2
POU class 4 homeobox 2
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:2176272 (PMID:18367606) (MGI:5316576|PMID:21875655), (MGI:5636080|PMID:25775587)
UniProt RGD
PMID:18367606 PMID:21875655 PMID:25775587
GO_REF:0000024 MGI:5316576 MGI:5636080
NCBI chr19:29,486,686...29,490,327
Ensembl chr19:29,486,686...29,490,327
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Ppp1r13l
protein phosphatase 1, regulatory subunit 13 like
involved_in
IMP IBA
GO_REF:0000033
GO_Central RGD
PMID:17872376
GO_REF:0000033, RGD:8693594
NCBI chr 1:79,010,997...79,030,714
Ensembl chr 1:79,011,745...79,030,712
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Ptn
pleiotrophin
involved_in
ISO
(MGI:6294220|PMID:28657144)
RGD
PMID:28657144
MGI:6294220
NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456
G
Serpinf2
serpin family F member 2
involved_in
ISO
(PMID:20008146) (MGI:4420717|PMID:20008146)
RGD
PMID:20008146
MGI:4420717
NCBI chr10:60,272,400...60,280,506
Ensembl chr10:60,272,400...60,281,243
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Slc6a6
solute carrier family 6 member 6
acts_upstream_of involved_in
ISO IEA
(PMID:23519128) GO_REF:0000107
RGD Ensembl
PMID:23519128
GO_REF:0000107
NCBI chr 4:124,195,186...124,268,880
Ensembl chr 4:124,195,218...124,268,875
G
Smad1
SMAD family member 1
IDA
RGD
PMID:17525996
RGD:1643226
NCBI chr19:28,513,130...28,573,665
Ensembl chr19:28,513,131...28,573,651
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Smad9
SMAD family member 9
IDA
RGD
PMID:16585960
RGD:2303147
NCBI chr 2:138,956,326...139,006,315
Ensembl chr 2:138,986,471...139,006,307
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Smarca4
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4
acts_upstream_of_or_within
ISO
(PMID:23319608)
RGD
PMID:23319608
NCBI chr 8:20,167,717...20,258,975
Ensembl chr 8:20,167,717...20,258,975
G
Socs3
suppressor of cytokine signaling 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:96787 (PMID:15358627)
Ensembl RGD
PMID:15358627
GO_REF:0000107
NCBI chr10:103,193,909...103,197,322
Ensembl chr10:103,193,537...103,197,787
G
Sox2
SRY-box transcription factor 2
IMP
RGD
PMID:19161985
RGD:8661678
NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338
G
Srf
serum response factor
acts_upstream_of_or_within
ISO
(PMID:17576768)
RGD
PMID:17576768
NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733
G
Uts2
urotensin 2
IDA
RGD
PMID:18475149
RGD:2306811
NCBI chr 5:161,450,846...161,456,235
Ensembl chr 5:161,450,846...161,456,237
G
Nkx6-2
NK6 homeobox 2
acts_upstream_of_or_within
ISO
MGI:2651850 (PMID:11567614)
RGD
PMID:11567614
NCBI chr 1:194,380,149...194,383,533
Ensembl chr 1:194,381,975...194,383,515
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Spdef
SAM pointed domain containing ets transcription factor
acts_upstream_of_or_within
ISO
MGI:4398888 (PMID:19759516)
RGD
PMID:19759516
NCBI chr20:5,771,440...5,785,893
Ensembl chr20:5,771,441...5,785,893
G
Fgf2
fibroblast growth factor 2
acts_upstream_of_or_within
ISO
(PMID:18635606)
RGD
PMID:18635606
NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
G
Gfi1
growth factor independent 1 transcriptional repressor
acts_upstream_of_or_within
ISO
MGI:2449921 (PMID:16230531)
RGD
PMID:16230531
NCBI chr14:2,040,576...2,056,874
Ensembl chr14:2,042,434...2,051,814
G
Pax6
paired box 6
IMP
RGD
PMID:11880342
RGD:729590
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
G
Adrb1
adrenoceptor beta 1
IMP
RGD
PMID:18194989
RGD:5129139
NCBI chr 1:255,771,962...255,774,973
Ensembl chr 1:255,771,597...255,807,259
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Akap6
A-kinase anchoring protein 6
IMP IDA
RGD
PMID:21550986 PMID:16306226
RGD:6902940 , RGD:2312613
NCBI chr 6:70,184,101...70,624,369
Ensembl chr 6:70,184,175...70,619,738
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Ccn4
cellular communication network factor 4
IMP
RGD
PMID:21376054
RGD:5129173
NCBI chr 7:98,645,238...98,677,253
Ensembl chr 7:98,645,182...98,677,248
G
Ddx39b
DExD-box helicase 39B
IMP
RGD
PMID:20116367
RGD:10401141
NCBI chr20:3,547,702...3,585,064
Ensembl chr20:3,572,056...3,584,996
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Edn1
endothelin 1
involved_in
ISO
RNAcentral:URS000006FDD4_9606|RNAcentral:URS000013D17D_9606 (PMID:24117217)
RGD
PMID:24117217
NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
G
Ep300
E1A binding protein p300
IMP
RGD
PMID:12724418
RGD:2312280
NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088 Ensembl chr 7:113,106,247...113,136,088
G
Fdps
farnesyl diphosphate synthase
IMP
RGD
PMID:19716825
RGD:2316294
NCBI chr 2:174,497,402...174,507,031
Ensembl chr 2:174,486,665...174,507,776
G
Hamp
hepcidin antimicrobial peptide
IMP
RGD
PMID:24424338
RGD:11041632
NCBI chr 1:86,170,926...86,172,865
Ensembl chr 1:86,170,901...86,172,891
G
Igf1
insulin-like growth factor 1
involved_in
ISO IEA
RNAcentral:URS000006FDD4_9606|RNAcentral:URS000013D17D_9606 (PMID:24117217) GO_REF:0000107
RGD Ensembl
PMID:24117217
GO_REF:0000107
NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
G
Mir19a
microRNA 19a
involved_in
ISO
UniProtKB:P05019 (PMID:24117217)
RGD
PMID:24117217
NCBI chr15:92,180,912...92,180,993
Ensembl chr15:92,180,912...92,180,993
G
Mir19b1
microRNA 19b-1
involved_in
ISO
UniProtKB:P05019 (PMID:24117217)
RGD
PMID:24117217
NCBI chr15:92,181,214...92,181,300
Ensembl chr15:92,181,214...92,181,300
G
Mir19b2
microRNA 19b-2
involved_in
ISO
UniProtKB:P05019 (PMID:24117217)
RGD
PMID:24117217
NCBI chr X:132,422,072...132,422,167
Ensembl chr X:132,422,072...132,422,167
G
Mtor
mechanistic target of rapamycin kinase
IMP
RGD
PMID:21318349 PMID:21933187
RGD:10040977 , RGD:10040978
NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
G
Nr3c1
nuclear receptor subfamily 3, group C, member 1
IMP
RGD
PMID:22989630
RGD:7174736
NCBI chr18:31,271,681...31,393,320
Ensembl chr18:31,271,681...31,393,375
G
Parp2
poly (ADP-ribose) polymerase 2
IMP
RGD
PMID:23261455
RGD:13514044
NCBI chr15:24,034,069...24,044,340
Ensembl chr15:24,034,106...24,044,338
G
Pin1
peptidylprolyl cis/trans isomerase, NIMA-interacting 1
IMP
RGD
PMID:23487407
RGD:8693424
NCBI chr 8:19,189,408...19,200,785
Ensembl chr 8:19,189,373...19,200,785
G
Sirt1
sirtuin 1
IMP
RGD
PMID:25281201
RGD:13514043
NCBI chr20:25,307,225...25,329,273
Ensembl chr20:25,306,917...25,329,260
G
Slc25a4
solute carrier family 25 member 4
IDA
RGD
PMID:21325829
RGD:9681466
NCBI chr16:46,072,935...46,076,730
Ensembl chr16:46,072,939...46,076,733
G
Trip10
thyroid hormone receptor interactor 10
IMP
RGD
PMID:23915320
RGD:11535145
NCBI chr 9:2,133,085...2,147,795
Ensembl chr 9:2,133,671...2,147,799
G
Clec7a
C-type lectin domain containing 7A
involved_in
ISO
(PMID:19358895)
RGD
PMID:19358895
NCBI chr 4:162,902,731...162,913,931
Ensembl chr 4:162,902,732...162,913,897
G
Runx1
RUNX family transcription factor 1
acts_upstream_of_or_within
ISO
(PMID:24582971)
RGD
PMID:24582971
NCBI chr11:31,839,880...32,074,427
Ensembl chr11:31,843,764...32,074,542
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Hoxa11
homeobox A11
acts_upstream_of_or_within
ISO
MGI:96203 (PMID:14668414)
RGD
PMID:14668414
NCBI chr 4:81,342,527...81,346,189
Ensembl chr 4:81,342,528...81,346,232
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Hoxd11
homeobox D11
acts_upstream_of_or_within
ISO
MGI:96172 (PMID:14668414)
RGD
PMID:14668414
NCBI chr 3:59,584,840...59,587,257
Ensembl chr 3:59,585,039...59,586,783
G
Bmp6
bone morphogenetic protein 6
IDA
RGD
PMID:23077084
RGD:7242190
NCBI chr17:26,318,121...26,469,691
Ensembl chr17:26,318,569...26,470,365
G
Fgf18
fibroblast growth factor 18
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:95524 (PMID:15781473)
Ensembl RGD
PMID:15781473
GO_REF:0000107
NCBI chr10:17,706,011...17,737,702
Ensembl chr10:17,706,174...17,736,818
G
Gdf5
growth differentiation factor 5
involved_in acts_upstream_of_or_within
ISO
(PMID:21976273), (PMID:24098149) MGI:1927616 (PMID:18363966), (PMID:9885252)
RGD
PMID:9885252 PMID:18363966 PMID:21976273 PMID:24098149
NCBI chr 3:144,454,316...144,458,508
Ensembl chr 3:144,454,338...144,458,612
G
Gdf6
growth differentiation factor 6
involved_in
ISO ISS
(PMID:26643732) GO_REF:0000024
RGD UniProt
PMID:26643732
GO_REF:0000024
NCBI chr 5:22,996,246...23,012,567
Ensembl chr 5:22,996,246...23,012,567
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Gli3
GLI family zinc finger 3
acts_upstream_of_or_within
ISO
MGI:1856276 (PMID:17328886)
RGD
PMID:17328886
NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
G
Hoxa11
homeobox A11
acts_upstream_of_or_within
ISO
MGI:96203 (PMID:14668414)
RGD
PMID:14668414
NCBI chr 4:81,342,527...81,346,189
Ensembl chr 4:81,342,528...81,346,232
G
Hoxd11
homeobox D11
acts_upstream_of_or_within
ISO
MGI:96172 (PMID:14668414)
RGD
PMID:14668414
NCBI chr 3:59,584,840...59,587,257
Ensembl chr 3:59,585,039...59,586,783
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Loxl2
lysyl oxidase-like 2
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:5320274|PMID:21071451) GO_REF:0000024
Ensembl RGD UniProt
PMID:21071451
GO_REF:0000024 GO_REF:0000107 MGI:5320274
NCBI chr15:44,683,449...44,773,067
Ensembl chr15:44,683,880...44,773,067
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Mustn1
musculoskeletal, embryonic nuclear protein 1
acts_upstream_of_or_within
ISO
(PMID:19410023)
RGD
PMID:19410023
NCBI chr16:6,072,908...6,075,161
Ensembl chr16:6,072,833...6,075,161
G
Pkdcc
protein kinase domain containing, cytoplasmic
involved_in
ISO
(MGI:3813934|PMID:19097194), (MGI:4438146|PMID:19465597)
RGD
PMID:19097194 PMID:19465597
MGI:3813934 MGI:4438146
NCBI chr 6:11,455,686...11,465,002
Ensembl chr 6:11,455,686...11,465,556
G
Por
cytochrome p450 oxidoreductase
IMP
RGD
PMID:19264869
RGD:2316785
NCBI chr12:20,951,058...20,999,198
Ensembl chr12:20,951,058...20,999,245
G
Prkg2
protein kinase cGMP-dependent 2
IGI
RGD
PMID:15466490
RGD:150429792
NCBI chr14:10,559,882...10,668,479
Ensembl chr14:10,559,882...10,666,888
G
Rela
RELA proto-oncogene, NF-kB subunit
IMP
RGD
PMID:17884819
RGD:2298851
NCBI chr 1:202,925,001...202,935,484
Ensembl chr 1:202,924,945...202,935,484
G
Runx2
RUNX family transcription factor 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2176465 (PMID:10072783)
Ensembl RGD
PMID:10072783
GO_REF:0000107
NCBI chr 9:16,167,504...16,492,826
Ensembl chr 9:16,167,482...16,492,167
G
Smad3
SMAD family member 3
involved_in
ISO
(MGI:5285145|PMID:21035443)
RGD
PMID:21035443
MGI:5285145
NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960
G
Sox5
SRY-box transcription factor 5
involved_in
ISO IBA IEA
(PMID:21401405) GO_REF:0000033 GO_REF:0000118 (MGI:5285147|PMID:20940257)
RGD GO_Central TreeGrafter
PMID:20940257 PMID:21401405
GO_REF:0000033 GO_REF:0000118 MGI:5285147
NCBI chr 4:176,781,375...177,736,833
Ensembl chr 4:176,785,892...177,736,852
G
Sox6
SRY-box transcription factor 6
involved_in
ISO IBA IEA
(PMID:21401405) GO_REF:0000033 GO_REF:0000118 GO_REF:0000107 (MGI:5285147|PMID:20940257)
RGD GO_Central TreeGrafter Ensembl
PMID:20940257 PMID:21401405
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:5285147
NCBI chr 1:169,723,306...170,334,846
Ensembl chr 1:169,729,194...170,277,386
G
Sox9
SRY-box transcription factor 9
involved_in
ISO IBA ISS
(PMID:20676705), (PMID:21401405) GO_REF:0000033 (MGI:4950303|PMID:21367821), (MGI:5285147|PMID:20940257) GO_REF:0000024
RGD GO_Central UniProt
PMID:20676705 PMID:20940257 PMID:21367821 PMID:21401405
GO_REF:0000024 GO_REF:0000033 MGI:4950303 MGI:5285147
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
G
Thrb
thyroid hormone receptor beta
IDA
RGD
PMID:15647824
RGD:1601663
NCBI chr15:7,685,180...8,031,920
Ensembl chr15:7,685,180...7,882,916
G
Zbtb16
zinc finger and BTB domain containing 16
involved_in
ISO ISS
(PMID:21547890) GO_REF:0000024
RGD UniProt
PMID:21547890
GO_REF:0000024
NCBI chr 8:48,989,376...49,177,011
Ensembl chr 8:48,994,566...49,177,011
G
Zfp219
zinc finger protein 219
involved_in
ISO
(MGI:5285147|PMID:20940257)
RGD
PMID:20940257
MGI:5285147
NCBI chr15:24,695,831...24,710,039
Ensembl chr15:24,695,837...24,710,030
G
Smad7
SMAD family member 7
involved_in
IEA ISO
GO_REF:0000107 (MGI:6377914|PMID:29503843)
Ensembl RGD
PMID:29503843
GO_REF:0000107 MGI:6377914
NCBI chr18:68,988,429...69,016,774
Ensembl chr18:68,988,429...69,016,765
G
Bcl11a
BCL11 transcription factor A
involved_in
ISO
(PMID:19616629)
RGD
PMID:19616629
NCBI chr14:98,029,018...98,124,181
Ensembl chr14:98,030,461...98,124,180
G
Bdnf
brain-derived neurotrophic factor
involved_in acts_upstream_of_or_within
ISO IBA IEA
(PMID:19036963) (PMID:24573299) GO_REF:0000033 GO_REF:0000118 GO_REF:0000107
RGD GO_Central TreeGrafter Ensembl
PMID:19036963 PMID:24573299
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118
NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
G
Crabp2
cellular retinoic acid binding protein 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:18052984)
Ensembl RGD
PMID:18052984
GO_REF:0000107
NCBI chr 2:173,417,004...173,421,352
Ensembl chr 2:173,416,857...173,421,379
G
Dcx
doublecortin
IMP
RGD
PMID:19726658
RGD:12904759
NCBI chr X:107,430,767...107,573,612
Ensembl chr X:107,430,767...107,507,476
G
Efna5
ephrin A5
involved_in
ISO
(MGI:5426777|PMID:19036963)
RGD
PMID:19036963
MGI:5426777
NCBI chr 9:102,316,753...102,595,480
Ensembl chr 9:102,320,295...102,597,413
G
Ist1
IST1 factor associated with ESCRT-III
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2139806 (PMID:22619377)
Ensembl RGD
PMID:22619377
GO_REF:0000107
NCBI chr19:37,648,840...37,671,019
Ensembl chr19:37,648,095...37,670,956
G
Lpar3
lysophosphatidic acid receptor 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:22465231)
Ensembl RGD
PMID:22465231
GO_REF:0000107
NCBI chr 2:235,125,234...235,193,916
Ensembl chr 2:235,149,065...235,193,357
G
Ngf
nerve growth factor
involved_in acts_upstream_of_or_within
IBA ISO IEA
GO_REF:0000033 (PMID:18052984) GO_REF:0000118
GO_Central RGD TreeGrafter
PMID:18052984
GO_REF:0000033 GO_REF:0000118
NCBI chr 2:189,901,058...189,954,452
Ensembl chr 2:189,901,058...189,954,452
G
Rnd2
Rho family GTPase 2
acts_upstream_of_or_within
ISO
(PMID:22465231)
RGD
PMID:22465231
NCBI chr10:86,399,151...86,402,750
Ensembl chr10:86,399,148...86,402,742
G
Sema4d
semaphorin 4D
involved_in
ISO
(PMID:19788569)
RGD
PMID:19788569
NCBI chr17:13,430,324...13,537,146
Ensembl chr17:13,430,379...13,537,138
G
Wnt3
Wnt family member 3
acts_upstream_of_or_within
ISO
(PMID:18716223)
RGD
PMID:18716223
NCBI chr10:88,680,198...88,724,170
Ensembl chr10:88,680,248...88,724,099
G
Wnt3a
Wnt family member 3A
acts_upstream_of_or_within
ISO
(PMID:18716223)
RGD
PMID:18716223
NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324
G
Lrp1
LDL receptor related protein 1
IDA
RGD
PMID:23867460
RGD:13800520
NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
G
Sart1
spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP
involved_in
ISO
(PMID:10209962)
RGD
PMID:10209962
NCBI chr 1:202,690,472...202,699,136
Ensembl chr 1:202,690,459...202,699,136
G
Tnfsf9
TNF superfamily member 9
involved_in
IDA IBA
GO_REF:0000033
GO_Central RGD
PMID:19187795
GO_REF:0000033, RGD:2317344
NCBI chr 9:1,944,017...1,946,351
Ensembl chr 9:1,944,017...1,946,345
G
Ache
acetylcholinesterase
IMP
RGD
PMID:12799140
RGD:1299197
NCBI chr12:19,406,133...19,413,713
Ensembl chr12:19,407,360...19,413,651
G
Actr3
actin related protein 3
IMP
RGD
PMID:18430734
RGD:2306201
NCBI chr13:36,800,739...36,843,837
Ensembl chr13:36,800,093...36,844,124
G
Afdn
afadin, adherens junction formation factor
IMP
RGD
PMID:22948147
RGD:13838731
NCBI chr 1:53,905,344...54,034,216
Ensembl chr 1:53,905,373...54,034,216
G
Akap5
A-kinase anchoring protein 5
IMP
RGD
PMID:19535604
RGD:2313144
NCBI chr 6:95,051,527...95,061,075
Ensembl chr 6:95,051,537...95,061,578
G
Anapc2
anaphase promoting complex subunit 2
IMP
RGD
PMID:19167333
RGD:2306262
NCBI chr 3:8,086,434...8,098,182
Ensembl chr 3:8,086,462...8,098,178
G
Ankrd27
ankyrin repeat domain 27
involved_in
ISO
(MGI:5490454|PMID:22171327)
RGD
PMID:22171327
MGI:5490454
NCBI chr 1:88,251,216...88,303,615
Ensembl chr 1:88,251,226...88,303,615
G
Caprin1
cell cycle associated protein 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:4888105|PMID:20516077)
UniProt RGD
PMID:20516077
GO_REF:0000024 MGI:4888105
NCBI chr 3:90,152,305...90,230,447
Ensembl chr 3:90,153,620...90,230,502
G
Caprin2
caprin family member 2
involved_in
ISO
(MGI:4888105|PMID:20516077)
RGD
PMID:20516077
MGI:4888105
NCBI chr 4:181,806,105...181,860,754
Ensembl chr 4:181,806,575...181,860,830
G
Cdkl3
cyclin-dependent kinase-like 3
acts_upstream_of_or_within involved_in
IMP ISO IBA IEA
PMID:20347982 (PMID:20347982) GO_REF:0000033 GO_REF:0000118
RGD GO_Central TreeGrafter
PMID:20347982 PMID:20347982
GO_REF:0000033 GO_REF:0000118, RGD:8693354
NCBI chr10:36,263,212...36,349,268
Ensembl chr10:36,266,977...36,349,268
G
Cdkl5
cyclin-dependent kinase-like 5
involved_in
IMP
PMID:20861382
CACAO
PMID:20861382
RGD:8554575
NCBI chr X:33,757,605...33,988,075
Ensembl chr X:33,821,257...33,986,582
G
Cul7
cullin 7
involved_in
ISO IEA IMP
UniProtKB:D3ZEF4 (PMID:21572988) GO_REF:0000107
RGD Ensembl
PMID:21572988 PMID:21572988
GO_REF:0000107, RGD:8554449
NCBI chr 9:14,319,102...14,333,035
Ensembl chr 9:14,319,108...14,332,741
G
Cux1
cut-like homeobox 1
involved_in
ISO
(MGI:4836115|PMID:20510857)
RGD
PMID:20510857
MGI:4836115
NCBI chr12:20,107,062...20,425,868
Ensembl chr12:20,107,311...20,425,866
G
Cux2
cut-like homeobox 2
involved_in
ISO
(MGI:4836115|PMID:20510857)
RGD
PMID:20510857
MGI:4836115
NCBI chr12:34,507,723...34,707,581
Ensembl chr12:34,520,959...34,705,806
G
Dlg4
discs large MAGUK scaffold protein 4
IMP
RGD
PMID:25424568
RGD:11060597
NCBI chr10:54,740,700...54,769,097
Ensembl chr10:54,739,470...54,767,153
G
Epha4
Eph receptor A4
IMP
RGD
PMID:19414612
RGD:5688776
NCBI chr 9:78,815,460...78,958,139
Ensembl chr 9:78,815,460...78,958,139
G
Fbxo31
F-box protein 31
involved_in
IMP
PMID:23469015
CACAO
PMID:23469015
RGD:10047221
NCBI chr19:49,624,813...49,656,052
Ensembl chr19:49,627,686...49,656,010
G
Fbxw8
F-box and WD repeat domain containing 8
involved_in
ISO IEA IMP
(PMID:21572988) GO_REF:0000107
RGD Ensembl
PMID:21572988 PMID:21572988
GO_REF:0000107, RGD:8554449
NCBI chr12:38,426,466...38,517,076
Ensembl chr12:38,426,444...38,516,424
G
Fzd4
frizzled class receptor 4
IMP
RGD
PMID:25424568
RGD:11060597
NCBI chr 1:143,279,934...143,288,799
Ensembl chr 1:143,280,065...143,285,724
G
Grip1
glutamate receptor interacting protein 1
IMP
RGD
PMID:15965473 PMID:25424568
RGD:127285651 , RGD:11060597
NCBI chr 7:54,934,856...55,592,274
Ensembl chr 7:54,934,250...55,592,273
G
Hdac6
histone deacetylase 6
IMP
RGD
PMID:19167333
RGD:2306262
NCBI chr X:14,550,645...14,572,445
Ensembl chr X:14,551,044...14,572,441
G
Il1rapl1
interleukin 1 receptor accessory protein-like 1
involved_in
ISO
(MGI:5294265|PMID:21940441)
RGD
PMID:21940441
MGI:5294265
NCBI chr X:51,371,969...52,876,726
Ensembl chr X:51,378,215...52,876,772
G
Ilk
integrin-linked kinase
IMP
inhibition in the nucleus accumbens decreases dendrite density of medium spiny neurons neuronal depolarization-induced dendrite initiation and growth
RGD
PMID:18602949 PMID:17182785
RGD:2301736 , RGD:2301767
NCBI chr 1:160,088,839...160,095,140
Ensembl chr 1:160,088,897...160,095,140
G
Met
MET proto-oncogene, receptor tyrosine kinase
IMP
RGD
PMID:18262389
RGD:2317458
NCBI chr 4:45,790,456...45,898,139
Ensembl chr 4:45,790,791...45,897,876
G
Myo5b
myosin Vb
IMP
RGD
PMID:23554492
RGD:11533644
NCBI chr18:68,038,759...68,341,568
Ensembl chr18:68,038,759...68,338,745
G
Numb
NUMB, endocytic adaptor protein
IMP
RGD
PMID:16394100
RGD:2302413
NCBI chr 6:103,431,400...103,553,422
Ensembl chr 6:103,431,400...103,553,354
G
Numbl
NUMB-like, endocytic adaptor protein
IMP
RGD
PMID:16394100
RGD:2302413
NCBI chr 1:82,549,814...82,573,788
Ensembl chr 1:82,550,054...82,573,776
G
Obsl1
obscurin like cytoskeletal adaptor 1
involved_in
ISO IMP
(PMID:21572988)
RGD
PMID:21572988 PMID:21572988
RGD:8554449
NCBI chr 9:76,967,802...76,993,771
Ensembl chr 9:76,974,253...76,993,560
G
Parp6
poly (ADP-ribose) polymerase family, member 6
IMP
RGD
PMID:26725726
RGD:11571888
NCBI chr 8:60,016,594...60,049,108
Ensembl chr 8:60,016,877...60,049,108
G
Pias2
protein inhibitor of activated STAT, 2
IMP
RGD
PMID:17855618
RGD:2298751
NCBI chr18:70,608,034...70,714,295
Ensembl chr18:70,607,665...70,710,033
G
Ptprd
protein tyrosine phosphatase, receptor type, D
involved_in
ISO
(MGI:5294265|PMID:21940441)
RGD
PMID:21940441
MGI:5294265
NCBI chr 5:90,046,993...90,698,977 NCBI chr 5:91,122,354...91,641,754
Ensembl chr 5:90,048,966...92,369,396
G
Ptprf
protein tyrosine phosphatase, receptor type, F
IMP
RGD
PMID:15750591
RGD:1642736
NCBI chr 5:131,741,959...131,824,000
Ensembl chr 5:131,742,754...131,810,023
G
Rab21
RAB21, member RAS oncogene family
involved_in
ISO
(MGI:5490454|PMID:22171327)
RGD
PMID:22171327
MGI:5490454
NCBI chr 7:50,904,050...50,928,890
Ensembl chr 7:50,904,057...50,928,839
G
Sgk1
serum/glucocorticoid regulated kinase 1
IMP
RGD
PMID:16049181
RGD:1642773
NCBI chr 1:22,980,257...23,098,122
Ensembl chr 1:22,980,261...23,098,283
G
Sh3glb1
SH3 domain -containing GRB2-like endophilin B1
IMP
RGD
PMID:18768694
RGD:13504749
NCBI chr 2:233,750,838...233,784,817
Ensembl chr 2:233,750,838...233,784,784
G
Smad1
SMAD family member 1
IEP
RGD
PMID:15056710
RGD:1643236
NCBI chr19:28,513,130...28,573,665
Ensembl chr19:28,513,131...28,573,651
G
Ss18l1
SS18L1 subunit of BAF chromatin remodeling complex
involved_in acts_upstream_of_or_within
IEA ISO IBA
GO_REF:0000107 (PMID:23785148) GO_REF:0000033
Ensembl RGD GO_Central
PMID:23785148
GO_REF:0000033 GO_REF:0000107
NCBI chr 3:167,143,730...167,165,253
Ensembl chr 3:167,143,994...167,165,253
G
Tbc1d24
TBC1 domain family, member 24
IMP
RGD
PMID:24469796
RGD:11537391
NCBI chr10:13,205,819...13,236,013
Ensembl chr10:13,209,895...13,236,050
G
Tnik
TRAF2 and NCK interacting kinase
involved_in
IMP
PMID:21048137
CACAO
PMID:21048137
RGD:8553980
NCBI chr 2:111,184,352...111,587,993
Ensembl chr 2:111,184,387...111,580,750
G
Vamp7
vesicle-associated membrane protein 7
involved_in
ISO
(MGI:5490454|PMID:22171327)
RGD
PMID:22171327
MGI:5490454
NCBI chr12:16,728,486...16,764,261
Ensembl chr12:16,728,524...16,764,097
G
Wls
Wnt ligand secretion mediator
IMP
RGD
PMID:25424568
RGD:11060597
NCBI chr 2:248,931,885...249,047,248
Ensembl chr 2:248,931,903...249,048,298
G
Wnt5a
Wnt family member 5A
IMP
RGD
PMID:25424568
RGD:11060597
NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234
G
Ager
advanced glycosylation end product-specific receptor
involved_in
ISO IEA
(PMID:15944249) GO_REF:0000107
RGD Ensembl
PMID:15944249
GO_REF:0000107
NCBI chr20:4,148,150...4,151,361
Ensembl chr20:4,147,890...4,151,078
G
Cd40lg
CD40 ligand
IDA
RGD
PMID:18384807
RGD:2313415
NCBI chr X:135,127,052...135,138,768
Ensembl chr X:135,126,969...135,138,306
G
Hmgb1
high mobility group box 1
involved_in
ISO
(PMID:15944249)
RGD
PMID:15944249
NCBI chr12:5,972,950...5,979,658
Ensembl chr12:5,901,586...5,978,565 Ensembl chr16:5,901,586...5,978,565
G
Lgals1
galectin 1
NOT|involved_in
ISO
(PMID:16116184)
RGD
PMID:16116184
NCBI chr 7:110,485,239...110,488,345
Ensembl chr 7:110,481,392...110,488,345
G
Lgals3
galectin 3
NOT|involved_in
ISO
(PMID:16116184)
RGD
PMID:16116184
NCBI chr15:20,620,083...20,632,019
Ensembl chr15:20,607,692...20,632,025
G
Lgals9
galectin 9
involved_in
ISO
(PMID:16116184)
RGD
PMID:16116184
NCBI chr10:63,907,018...63,930,224
Ensembl chr10:63,907,018...63,930,045
G
Zbtb46
zinc finger and BTB domain containing 46
acts_upstream_of_or_within
ISO
MGI:5320483 (PMID:22615127)
RGD
PMID:22615127
NCBI chr 3:168,497,294...168,567,799
Ensembl chr 3:168,499,583...168,568,782
G
Actr2
actin related protein 2
IMP
RGD
PMID:23441206
RGD:11530033
NCBI chr14:94,296,443...94,333,735
Ensembl chr14:94,296,443...94,340,524
G
Actr3
actin related protein 3
IMP
RGD
PMID:23441206
RGD:11530033
NCBI chr13:36,800,739...36,843,837
Ensembl chr13:36,800,093...36,844,124
G
Afdn
afadin, adherens junction formation factor
IMP
RGD
PMID:22948147
RGD:13838731
NCBI chr 1:53,905,344...54,034,216
Ensembl chr 1:53,905,373...54,034,216
G
Baiap2
BAR/IMD domain containing adaptor protein 2
IMP
RGD
PMID:15673667
RGD:9684988
NCBI chr10:105,223,065...105,290,130
Ensembl chr10:105,223,090...105,290,134
G
Camk2b
calcium/calmodulin-dependent protein kinase II beta
involved_in
IMP
PMID:12873385
UniProt
PMID:12873385
RGD:8553829
NCBI chr14:80,845,206...80,934,172
Ensembl chr14:80,845,238...80,933,994
G
Caprin1
cell cycle associated protein 1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:4888105|PMID:20516077)
UniProt Ensembl RGD
PMID:20516077
GO_REF:0000024 GO_REF:0000107 MGI:4888105
NCBI chr 3:90,152,305...90,230,447
Ensembl chr 3:90,153,620...90,230,502
G
Caprin2
caprin family member 2
involved_in
ISO
(MGI:4888105|PMID:20516077)
RGD
PMID:20516077
MGI:4888105
NCBI chr 4:181,806,105...181,860,754
Ensembl chr 4:181,806,575...181,860,830
G
Cask
calcium/calmodulin dependent serine protein kinase
IMP
RGD
PMID:18606847
RGD:11576294
NCBI chr X:8,899,500...9,243,014
Ensembl chr X:8,899,833...9,238,694
G
Cux2
cut-like homeobox 2
involved_in
ISO
(MGI:4836115|PMID:20510857)
RGD
PMID:20510857
MGI:4836115
NCBI chr12:34,507,723...34,707,581
Ensembl chr12:34,520,959...34,705,806
G
Dbn1
drebrin 1
involved_in
IMP IBA ISO ISS IEA
GO_REF:0000033 (MGI:5688247|PMID:25865831) GO_REF:0000024 GO_REF:0000107
GO_Central RGD UniProt Ensembl
PMID:25865831 PMID:19174472
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:5688247 , RGD:10398809
NCBI chr17:9,150,608...9,164,982
Ensembl chr17:9,150,659...9,164,984
G
Dbnl
drebrin-like
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr14:80,666,115...80,681,155
Ensembl chr14:80,666,124...80,681,155
G
Dhx36
DEAH-box helicase 36
involved_in
IMP
PMID:23651854
UniProt
PMID:23651854
RGD:13792545
NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572
G
Dnm1l
dynamin 1-like
IMP
RGD
PMID:19605646
RGD:7800727
NCBI chr11:84,581,216...84,632,382
Ensembl chr11:84,581,216...84,631,482
G
Eef2k
eukaryotic elongation factor-2 kinase
IMP
RGD
PMID:20427644
RGD:10401235
NCBI chr 1:175,393,119...175,456,756
Ensembl chr 1:175,393,154...175,455,164
G
Ephb2
Eph receptor B2
IMP
RGD
PMID:21364901
RGD:127285794
NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
G
Gprasp3
G protein-coupled receptor associated sorting protein family member 3
involved_in
ISO
(MGI:5545985|PMID:21199326)
RGD
PMID:21199326
MGI:5545985
NCBI chr X:98,847,591...98,854,949
Ensembl chr X:98,817,593...98,854,545
G
Itpka
inositol-trisphosphate 3-kinase A
acts_upstream_of_or_within
IMP
PMID:19890013
MGI
PMID:19890013
RGD:8553536
NCBI chr 3:106,726,036...106,734,601
Ensembl chr 3:106,726,036...106,734,600
G
Kalrn
kalirin, RhoGEF kinase
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:4358076 (PMID:19625617)
Ensembl RGD
PMID:19625617
GO_REF:0000107
NCBI chr11:66,198,155...66,803,166
Ensembl chr11:66,198,173...66,797,610
G
Lrp8
LDL receptor related protein 8
involved_in
ISO
(MGI:5426130|PMID:21852430)
RGD
PMID:21852430
MGI:5426130
NCBI chr 5:122,563,468...122,635,434
Ensembl chr 5:122,563,453...122,631,352
G
Marcks
myristoylated alanine rich protein kinase C substrate
IMP
RGD
PMID:16202710
RGD:9685333
NCBI chr20:40,685,315...40,691,012
Ensembl chr20:40,685,315...40,691,012
G
Mfn1
mitofusin 1
IMP
RGD
PMID:19605646
RGD:7800727
NCBI chr 2:115,313,380...115,359,651
Ensembl chr 2:115,313,401...115,359,640
G
Mfn2
mitofusin 2
IMP
RGD
PMID:19605646
RGD:7800727
NCBI chr 5:158,304,285...158,335,502
Ensembl chr 5:158,304,287...158,335,342
G
Opa1
OPA1, mitochondrial dynamin like GTPase
IMP
RGD
PMID:19605646
RGD:7800727
NCBI chr11:71,108,100...71,185,170
Ensembl chr11:71,109,873...71,185,109
G
Pafah1b1
platelet-activating factor acetylhydrolase 1b, regulatory subunit 1
involved_in
ISO
(MGI:5619436|PMID:23483716)
RGD
PMID:23483716
MGI:5619436
NCBI chr10:59,533,042...59,591,808
Ensembl chr10:59,534,117...59,591,808
G
Pak3
p21 (RAC1) activated kinase 3
IMP
RGD
PMID:18481281
RGD:7775053
NCBI chr X:107,116,308...107,374,342
Ensembl chr X:107,260,898...107,368,314
G
Reln
reelin
involved_in
IEA ISO
GO_REF:0000107 (MGI:5286805|PMID:21664258), (MGI:5426130|PMID:21852430)
Ensembl RGD
PMID:21664258 PMID:21852430
GO_REF:0000107 MGI:5286805 MGI:5426130
NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211
G
Slc30a1
solute carrier family 30 member 1
IMP
RGD
PMID:25319628
RGD:11057402
NCBI chr13:103,491,037...103,494,910
Ensembl chr13:103,491,037...103,494,910
G
Stau2
staufen double-stranded RNA binding protein 2
IMP
RGD
PMID:16418534
RGD:10043163
NCBI chr 5:2,840,741...3,084,935
Ensembl chr 5:2,840,765...3,084,929
G
Tiam1
TIAM Rac1 associated GEF 1
IMP
RGD
PMID:16474385
RGD:10043325
NCBI chr11:29,031,347...29,380,153
Ensembl chr11:29,031,348...29,159,901
G
Foxa1
forkhead box A1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1347476|MGI:2653543 (PMID:17596284)
Ensembl RGD
PMID:17596284
GO_REF:0000107
NCBI chr 6:75,099,907...75,136,534
Ensembl chr 6:75,103,503...75,136,188
G
Foxa2
forkhead box A2
acts_upstream_of_or_within
ISO
MGI:1347472|MGI:2177337 (PMID:17596284)
RGD
PMID:17596284
NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326
G
Twist1
twist family bHLH transcription factor 1
involved_in
ISO
(MGI:4838344|PMID:20804746)
RGD
PMID:20804746
MGI:4838344
NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653
G
Macroh2a1
macroH2A.1 histone
involved_in
ISO
(PMID:23595991)
RGD
PMID:23595991
NCBI chr17:8,479,331...8,542,071
Ensembl chr17:8,479,372...8,542,072
G
Map2k1
mitogen activated protein kinase kinase 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:16908534)
Ensembl RGD
PMID:16908534
GO_REF:0000107
NCBI chr 8:64,683,449...64,754,900
Ensembl chr 8:64,683,449...64,755,147
G
Sox17
SRY-box transcription factor 17
acts_upstream_of_or_within
ISO
(PMID:17940068)
RGD
PMID:17940068
NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228
G
Acvrl1
activin A receptor like type 1
involved_in
ISO
(MGI:4830635|PMID:20406889)
RGD
PMID:20406889
MGI:4830635
NCBI chr 7:132,239,200...132,256,592
Ensembl chr 7:132,239,729...132,256,591
G
Atoh8
atonal bHLH transcription factor 8
involved_in
ISO
(PMID:24463812)
RGD
PMID:24463812
NCBI chr 4:104,259,992...104,292,168
Ensembl chr 4:104,259,992...104,292,168
G
Bmp4
bone morphogenetic protein 4
involved_in
IEA ISO
GO_REF:0000107 (MGI:4830635|PMID:20406889)
Ensembl RGD
PMID:20406889
GO_REF:0000107 MGI:4830635
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Bmp6
bone morphogenetic protein 6
involved_in
ISO
(MGI:4830635|PMID:20406889)
RGD
PMID:20406889
MGI:4830635
NCBI chr17:26,318,121...26,469,691
Ensembl chr17:26,318,569...26,470,365
G
Btg1
BTG anti-proliferation factor 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:15033446)
UniProt RGD
PMID:15033446
GO_REF:0000024
NCBI chr 7:31,341,391...31,343,649
Ensembl chr 7:31,341,027...31,343,649
G
Ctnnb1
catenin beta 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2148567 (PMID:18231602)
Ensembl RGD
PMID:18231602
GO_REF:0000107
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
G
Etv2
ETS variant transcription factor 2
acts_upstream_of_or_within
ISO
(PMID:18462699)
RGD
PMID:18462699
NCBI chr 1:85,890,562...85,894,025
Ensembl chr 1:85,890,559...85,893,431
G
Gdf2
growth differentiation factor 2
involved_in
ISO
(MGI:4830635|PMID:20406889)
RGD
PMID:20406889
MGI:4830635
NCBI chr16:9,255,430...9,261,429
Ensembl chr16:9,255,430...9,261,429
G
Mir126a
microRNA 126a
IDA
RGD
PMID:32160957
RGD:401851064
NCBI chr 3:9,415,063...9,415,180
Ensembl chr 3:9,415,063...9,415,180
G
Mir150
microRNA 150
involved_in
ISO
(PMID:23765923)
RGD
PMID:23765923
NCBI chr 1:95,605,024...95,605,108
Ensembl chr 1:95,605,024...95,605,108
G
Mir181a2
microRNA 181a-2
involved_in
ISO
RNAcentral:URS0000241987_9606|RNAcentral:URS00003DA300_9606 (PMID:22232059)
RGD
PMID:22232059
NCBI chr 3:22,615,845...22,615,961
Ensembl chr 3:22,615,845...22,615,961
G
Mir181b1
microRNA 181b-1
involved_in
ISO
RNAcentral:URS0000229622_9606|RNAcentral:URS0000605E00_9606 (PMID:22232059)
RGD
PMID:22232059
NCBI chr13:49,485,688...49,485,797
Ensembl chr13:49,485,688...49,485,797
G
Mir181b2
microRNA 181b-2
involved_in
ISO
RNAcentral:URS0000229622_9606 (PMID:22232059)
RGD
PMID:22232059
NCBI chr 3:22,616,948...22,617,035
Ensembl chr 3:22,616,948...22,617,035
G
Mir200c
microRNA 200c
involved_in
ISO
(PMID:23765923)
RGD
PMID:23765923
NCBI chr 4:157,523,679...157,523,747
G
Mir21
microRNA 21
involved_in
ISO
(PMID:24356956)
RGD
PMID:24356956
NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348
G
Mir99b
microRNA 99b
involved_in
ISO
RNAcentral:URS00001C308D_9606|RNAcentral:URS00002C10B3_9606 (PMID:22232059)
RGD
PMID:22232059
NCBI chr 1:58,677,015...58,677,084
Ensembl chr 1:58,677,011...58,677,090
G
Notch1
notch receptor 1
IMP
RGD
PMID:19109527
RGD:2325303
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Tmem100
transmembrane protein 100
involved_in
ISO
(MGI:5432418|PMID:22783020)
RGD
PMID:22783020
MGI:5432418
NCBI chr10:74,854,779...74,861,147
Ensembl chr10:74,854,468...74,862,941
G
Vezf1
vascular endothelial zinc finger 1
involved_in
ISO
(PMID:27538588)
RGD
PMID:27538588
NCBI chr10:72,859,669...72,876,111
Ensembl chr10:72,859,877...72,876,111
G
Il5
interleukin 5
IDA
RGD
PMID:10727846 PMID:10529595
RGD:2303509 , RGD:2303750
NCBI chr10:37,874,342...37,877,213
Ensembl chr10:37,874,342...37,877,213
G
Trib1
tribbles pseudokinase 1
involved_in
ISO
(MGI:5488531|PMID:23515163)
RGD
PMID:23515163
MGI:5488531
NCBI chr 7:91,206,579...91,213,126
Ensembl chr 7:91,206,579...91,214,731
G
Bmp4
bone morphogenetic protein 4
involved_in
ISO ISS IEA
(PMID:18823971) GO_REF:0000024 GO_REF:0000107
RGD CAFA Ensembl
PMID:18823971
GO_REF:0000024 GO_REF:0000107
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Kdf1
keratinocyte differentiation factor 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:5529391|PMID:24075906)
UniProt RGD
PMID:24075906
GO_REF:0000024 MGI:5529391
NCBI chr 5:145,744,753...145,758,150
Ensembl chr 5:145,745,099...145,755,878
G
Ptch1
patched 1
acts_upstream_of_or_within
ISO
MGI:1095405 (PMID:24492243)
RGD
PMID:24492243
NCBI chr17:1,542,705...1,607,730
Ensembl chr17:1,542,877...1,607,333
G
Ptch2
patched 2
acts_upstream_of_or_within
ISO
MGI:105373 (PMID:24492243)
RGD
PMID:24492243
NCBI chr 5:130,571,956...130,592,506
Ensembl chr 5:130,572,312...130,592,405
G
Sfn
stratifin
involved_in
ISO
(MGI:5529391|PMID:24075906)
RGD
PMID:24075906
MGI:5529391
NCBI chr 5:145,826,722...145,827,994
Ensembl chr 5:145,826,201...145,831,314
G
Sfrp4
secreted frizzled-related protein 4
involved_in
ISO IEA
(PMID:18938133) GO_REF:0000107
RGD Ensembl
PMID:18938133
GO_REF:0000107
NCBI chr17:45,278,867...45,330,806
Ensembl chr17:45,234,097...45,330,736
G
Sult2b1
sulfotransferase family 2B member 1
involved_in
ISO
(PMID:28575648)
RGD
PMID:28575648
NCBI chr 1:96,200,155...96,261,295
Ensembl chr 1:96,200,156...96,261,295
G
Acvrl1
activin A receptor like type 1
acts_upstream_of
ISO
UniProtKB:Q9UK05 (PMID:32561494)
RGD
PMID:32561494
NCBI chr 7:132,239,200...132,256,592
Ensembl chr 7:132,239,729...132,256,591
G
Bmp2
bone morphogenetic protein 2
acts_upstream_of_or_within
ISO
(PMID:15525533)
RGD
PMID:15525533
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
G
Bmp4
bone morphogenetic protein 4
acts_upstream_of_or_within
ISO
(PMID:15525533)
RGD
PMID:15525533
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Bmp7
bone morphogenetic protein 7
acts_upstream_of_or_within
ISO
(PMID:15525533)
RGD
PMID:15525533
NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
G
Cdkn2b
cyclin-dependent kinase inhibitor 2B
IEP
RGD
PMID:17158884
RGD:2289700
NCBI chr 5:104,009,839...104,019,082
Ensembl chr 5:104,010,680...104,019,050
G
Commd5
COMM domain containing 5
IDA
RGD
PMID:12620924
RGD:632845
NCBI chr 7:108,621,766...108,623,616
Ensembl chr 7:108,598,673...108,624,764
G
Ctnnb1
catenin beta 1
acts_upstream_of_or_within
ISO
MGI:1858008|MGI:2445707|MGI:2679524 (PMID:16040629)
RGD
PMID:16040629
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
G
Dmbt1
deleted in malignant brain tumors 1
acts_upstream_of_or_within
ISO
(PMID:15452149)
RGD
PMID:15452149
NCBI chr 1:185,617,469...185,696,476
Ensembl chr 1:185,617,294...185,696,478
G
Foxn1
forkhead box N1
involved_in
ISO
(PMID:24383669)
RGD
PMID:24383669
NCBI chr10:63,251,400...63,273,710
Ensembl chr10:63,251,400...63,273,710
G
Gdf2
growth differentiation factor 2
involved_in
ISO
(PMID:32561494)
RGD
PMID:32561494
NCBI chr16:9,255,430...9,261,429
Ensembl chr16:9,255,430...9,261,429
G
Mir204
microRNA 204
involved_in
ISO
(PMID:22736612)
RGD
PMID:22736612
NCBI chr 1:220,316,931...220,317,040
Ensembl chr 1:220,316,931...220,317,040
G
Nkx2-2
NK2 homeobox 2
acts_upstream_of_or_within
ISO
MGI:1932100 (PMID:14729487)
RGD
PMID:14729487
NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411
G
Pax4
paired box 4
acts_upstream_of_or_within
ISO
MGI:2182122 (PMID:14729487)
RGD
PMID:14729487
NCBI chr 4:57,058,453...57,065,995
Ensembl chr 4:57,058,462...57,063,408
G
Pax6
paired box 6
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1856158 (PMID:16080917)
Ensembl RGD
PMID:16080917
GO_REF:0000107
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
G
Sox2
SRY-box transcription factor 2
acts_upstream_of_or_within
ISO
(PMID:18374910)
RGD
PMID:18374910
NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338
G
Sox9
SRY-box transcription factor 9
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:2429649 (PMID:17681175)
UniProt RGD
PMID:17681175
GO_REF:0000024
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
G
Wnt10b
Wnt family member 10B
acts_upstream_of_or_within
ISO
(PMID:18155657)
RGD
PMID:18155657
NCBI chr 7:129,922,088...129,927,892
Ensembl chr 7:129,922,088...129,927,892
G
Wnt9a
Wnt family member 9A
acts_upstream_of_or_within
ISO
MGI:3701350 (PMID:16818445)
RGD
PMID:16818445
NCBI chr10:44,094,140...44,121,134
Ensembl chr10:44,094,140...44,121,133
G
Adam8
ADAM metallopeptidase domain 8
involved_in
ISO
(MGI:7444872|PMID:34615811)
RGD
PMID:34615811
MGI:7444872
NCBI chr 1:194,776,559...194,789,330
Ensembl chr 1:194,770,060...194,788,801
G
Ager
advanced glycosylation end product-specific receptor
IMP
RGD
PMID:21743278
RGD:7243870
NCBI chr20:4,148,150...4,151,361
Ensembl chr20:4,147,890...4,151,078
G
Agt
angiotensinogen
involved_in
ISS ISO
GO_REF:0000024 (MGI:7444872|PMID:34615811)
UniProt RGD
PMID:34615811
GO_REF:0000024 MGI:7444872
NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
G
Alx1
ALX homeobox 1
involved_in
ISO IEA ISS
(PMID:23288509) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:23288509
GO_REF:0000024 GO_REF:0000107
NCBI chr 7:38,157,626...38,177,220
Ensembl chr 7:38,147,117...38,177,220
G
Axin2
axin 2
involved_in
ISO IEA
(PMID:17072303) GO_REF:0000107
RGD Ensembl
PMID:17072303
GO_REF:0000107
NCBI chr10:93,893,830...93,927,042
Ensembl chr10:93,899,245...93,926,231
G
Bambi
BMP and activin membrane-bound inhibitor
involved_in
ISO
(PMID:19328798)
RGD
PMID:19328798
NCBI chr17:54,121,251...54,125,816
Ensembl chr17:54,121,255...54,126,060
G
Bcl9l
BCL9 like
involved_in
ISO
(PMID:19328798)
RGD
PMID:19328798
NCBI chr 8:44,811,977...44,840,611
Ensembl chr 8:44,811,977...44,840,611
G
Bmp2
bone morphogenetic protein 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3583785 (PMID:16314491) (PMID:20890042)
Ensembl RGD
PMID:16314491 PMID:20890042
GO_REF:0000107
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
G
Bmp4
bone morphogenetic protein 4
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:P23359 (MGI:5502250|PMID:23863481)
Ensembl RGD
PMID:23863481
GO_REF:0000107 MGI:5502250
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Bmp7
bone morphogenetic protein 7
involved_in
ISO
UniProtKB:P21275 (MGI:5502250|PMID:23863481)
RGD
PMID:23863481
MGI:5502250
NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
G
Col1a1
collagen type I alpha 1 chain
involved_in
ISO
(PMID:20018240)
RGD
PMID:20018240
NCBI chr10:79,883,622...79,900,625
Ensembl chr10:79,883,622...79,900,624
G
Crb2
crumbs cell polarity complex component 2
involved_in
ISO ISS
(MGI:5296388|PMID:22072575), (MGI:5823085|PMID:27870829) GO_REF:0000024
RGD CAFA
PMID:22072575 PMID:27870829
GO_REF:0000024 MGI:5296388 MGI:5823085
NCBI chr 3:21,542,138...21,564,876
Ensembl chr 3:21,542,221...21,563,294
G
Ctnnb1
catenin beta 1
acts_upstream_of_or_within involved_in
ISO IEA
UniProtKB:Q9NX18 (PMID:23983127) (PMID:17072303) GO_REF:0000107
RGD Ensembl
PMID:17072303 PMID:23983127
GO_REF:0000107
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
G
Dab2
DAB adaptor protein 2
involved_in
IEA IBA ISO
GO_REF:0000107 GO_REF:0000033 (PMID:15734730) (MGI:5442513|PMID:15734730)
Ensembl GO_Central RGD
PMID:15734730
GO_REF:0000033 GO_REF:0000107 MGI:5442513
NCBI chr 2:55,514,692...55,567,476
Ensembl chr 2:55,514,700...55,567,476
G
Ezh2
enhancer of zeste 2 polycomb repressive complex 2 subunit
involved_in
ISO
(PMID:20154697)
RGD
PMID:20154697
NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
G
Fermt2
FERM domain containing kindlin 2
involved_in
ISO
(PMID:24226523)
RGD
PMID:24226523
NCBI chr15:18,682,927...18,751,959
Ensembl chr15:18,682,927...18,751,811
G
Foxc1
forkhead box C1
involved_in
ISO
(PMID:22991501)
RGD
PMID:22991501
NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803
G
Gcnt2
glucosaminyl (N-acetyl) transferase 2
involved_in
ISO
(PMID:21750175) (MGI:5545971|PMID:21750175)
RGD
PMID:21750175
MGI:5545971
NCBI chr17:23,796,859...23,901,625
Ensembl chr17:23,796,859...23,901,611
G
Glipr2
GLI pathogenesis-related 2
involved_in
ISO
(PMID:23516513)
RGD
PMID:23516513
NCBI chr 5:58,170,417...58,202,258
Ensembl chr 5:58,170,425...58,202,272
G
Hdac2
histone deacetylase 2
IMP
RGD
PMID:19553350
RGD:9590229
NCBI chr20:40,548,244...40,571,609
Ensembl chr20:40,548,250...40,571,609
G
Il1b
interleukin 1 beta
involved_in
ISO
(PMID:25204733)
RGD
PMID:25204733
NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
G
Il6
interleukin 6
involved_in
ISO
(PMID:25916550)
RGD
PMID:25916550
NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
G
Isl1
ISL LIM homeobox 1
involved_in
IMP
PMID:23270756
BHF-UCL RGD
PMID:23270756 PMID:23270756
RGD:13210526 , RGD:13210526
NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584
G
Kdm1a
lysine demethylase 1A
involved_in
ISO
(PMID:27292636)
RGD
PMID:27292636
NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319
G
Lef1
lymphoid enhancer binding factor 1
involved_in
ISO IEA
(PMID:20018240) GO_REF:0000107
RGD Ensembl
PMID:20018240
GO_REF:0000107
NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794
G
Loxl2
lysyl oxidase-like 2
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:24239292)
UniProt Ensembl RGD
PMID:24239292
GO_REF:0000024 GO_REF:0000107
NCBI chr15:44,683,449...44,773,067
Ensembl chr15:44,683,880...44,773,067
G
Lrg1
leucine-rich alpha-2-glycoprotein 1
involved_in
ISO
(PMID:32887674)
RGD
PMID:32887674
NCBI chr 9:947,516...949,773
Ensembl chr 9:947,516...949,813
G
Mad2l2
mitotic arrest deficient 2 like 2
IMP
TGFb1
RGD
PMID:27488450
RGD:152995505
NCBI chr 5:158,563,545...158,576,698
Ensembl chr 5:158,563,567...158,576,693
G
Mdk
midkine
involved_in
ISO IEA ISS
(PMID:18469519) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:18469519
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:77,901,134...77,903,997
Ensembl chr 3:77,901,158...77,903,130
G
Mir21
microRNA 21
involved_in
ISO
(PMID:24887517)
RGD
PMID:24887517
NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348
G
Mir221
microRNA 221
involved_in
ISO
RNAcentral:URS00002C6949_9606 (PMID:21673316)
RGD
PMID:21673316
NCBI chr X:3,429,465...3,429,573
Ensembl chr X:3,429,465...3,429,573
G
Mir222
microRNA 222
involved_in
ISO
RNAcentral:URS0000170CF4_9606 (PMID:21673316)
RGD
PMID:21673316
NCBI chr X:3,428,904...3,429,006
Ensembl chr X:3,428,904...3,429,006
G
Mtor
mechanistic target of rapamycin kinase
involved_in
ISO IEA
(PMID:27919618) GO_REF:0000107
RGD Ensembl
PMID:27919618
GO_REF:0000107
NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
G
Myocd
myocardin
involved_in
IMP
PMID:23270756
BHF-UCL
PMID:23270756
RGD:13210526
NCBI chr10:49,833,219...49,928,806
Ensembl chr10:49,836,641...49,927,627
G
Notch1
notch receptor 1
involved_in
ISO
(MGI:4837019|PMID:20890042)
RGD
PMID:20890042
MGI:4837019
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Olfm1
olfactomedin 1
involved_in
ISS
GO_REF:0000024
AgBase
GO_REF:0000024
NCBI chr 3:11,520,522...11,558,240
Ensembl chr 3:11,520,729...11,558,239
G
Pdpn
podoplanin
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000118 (PMID:17046996), (PMID:21376833)
UniProt TreeGrafter RGD
PMID:17046996 PMID:21376833
GO_REF:0000024 GO_REF:0000118
NCBI chr 5:155,601,691...155,635,656
Ensembl chr 5:155,601,691...155,635,656
G
Ptk2
protein tyrosine kinase 2
involved_in
ISO
RNAcentral:URS000060A1F4_9606 (PMID:26944318)
RGD
PMID:26944318
NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783
G
Rgcc
regulator of cell cycle
involved_in
ISO
(PMID:19158077), (PMID:21307346)
RGD
PMID:19158077 PMID:21307346
NCBI chr15:54,662,483...54,675,320
Ensembl chr15:54,662,483...54,681,141
G
Sdcbp
syndecan binding protein
involved_in
ISO ISS
(PMID:25893292) GO_REF:0000024
RGD UniProt
PMID:25893292
GO_REF:0000024
NCBI chr 5:19,473,499...19,517,188
Ensembl chr 5:19,489,961...19,527,572
G
Serpinb3
serpin family B member 3
involved_in
ISO
(PMID:20527027)
RGD
PMID:20527027
NCBI chr13:23,274,120...23,280,660
Ensembl chr13:23,274,484...23,313,682
G
Smad2
SMAD family member 2
involved_in
ISO
(MGI:2683382|PMID:14691138)
RGD
PMID:14691138
MGI:2683382
NCBI chr18:69,849,884...69,918,926
Ensembl chr18:69,850,377...69,912,323
G
Smad3
SMAD family member 3
involved_in
ISO
(PMID:18505915), (PMID:21307346)
RGD
PMID:18505915 PMID:21307346
NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960
G
Smad4
SMAD family member 4
involved_in
IEA ISO
GO_REF:0000107 (MGI:2683382|PMID:14691138)
Ensembl RGD
PMID:14691138
GO_REF:0000107 MGI:2683382
NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438
G
Snai1
snail family transcriptional repressor 1
involved_in
ISO
(PMID:20018240), (PMID:23288509) (MGI:4837019|PMID:20890042), (MGI:5548026|PMID:24239292)
RGD
PMID:20018240 PMID:20890042 PMID:23288509 PMID:24239292
MGI:4837019 MGI:5548026
NCBI chr 3:156,248,479...156,252,969
Ensembl chr 3:156,248,485...156,252,969
G
Tbx20
T-box transcription factor 20
involved_in
ISO
(MGI:5299248|PMID:21983003)
RGD
PMID:21983003
MGI:5299248
NCBI chr 8:23,200,104...23,258,218
Ensembl chr 8:23,204,507...23,258,175
G
Tcf7l2
transcription factor 7 like 2
involved_in
ISO
(PMID:17072303)
RGD
PMID:17072303
NCBI chr 1:254,785,956...254,978,967
Ensembl chr 1:254,786,091...254,978,967
G
Tgfb1
transforming growth factor, beta 1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 (PMID:18794329) (PMID:17999987), (PMID:18505915), (PMID:21490602), (PMID:26572508)
UniProt RGD
PMID:17999987 PMID:18505915 PMID:18794329 PMID:21490602 PMID:26572508
GO_REF:0000024
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
G
Tgfb1i1
transforming growth factor beta 1 induced transcript 1
involved_in
ISO IEA
(PMID:18762808) GO_REF:0000107
RGD Ensembl
PMID:18762808
GO_REF:0000107
NCBI chr 1:182,828,553...182,835,465
Ensembl chr 1:182,828,544...182,837,080
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:17999987), (PMID:18505915)
AgBase RGD
PMID:17999987 PMID:18505915
GO_REF:0000024
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
G
Tgfb3
transforming growth factor, beta 3
involved_in
ISS ISO
GO_REF:0000024 (MGI:2683382|PMID:14691138) (PMID:18505915), (PMID:18718461)
AgBase RGD
PMID:14691138 PMID:18505915 PMID:18718461
GO_REF:0000024 MGI:2683382
NCBI chr 6:105,704,058...105,726,661
Ensembl chr 6:105,704,236...105,726,564
G
Tgfbr1
transforming growth factor, beta receptor 1
involved_in
ISO
UniProtKB:P10600 (MGI:3820811|PMID:18718461)
RGD
PMID:18718461
MGI:3820811
NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
G
Tgfbr2
transforming growth factor, beta receptor 2
involved_in
ISO
(PMID:26459119)
RGD
PMID:26459119
NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228
G
Twist1
twist family bHLH transcription factor 1
involved_in
ISO
(PMID:18297062) (MGI:4838344|PMID:20804746), (MGI:5284765|PMID:18297062), (MGI:5284780|PMID:17332324)
RGD
PMID:17332324 PMID:18297062 PMID:20804746
MGI:4838344 MGI:5284765 MGI:5284780
NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653
G
Wwtr1
WW domain containing transcription regulator 1
involved_in
ISO
(PMID:18227151)
RGD
PMID:18227151
NCBI chr 2:141,651,159...141,766,919
Ensembl chr 2:141,648,108...141,766,968
G
Zfp703
zinc finger protein 703
involved_in
ISO
(MGI:4940410|PMID:21317240)
RGD
PMID:21317240
MGI:4940410
NCBI chr16:65,076,507...65,080,677
Ensembl chr16:65,076,507...65,080,677
G
Eng
endoglin
involved_in
ISO
(MGI:4368063|PMID:19703439)
RGD
PMID:19703439
MGI:4368063
NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
G
Tgfb2
transforming growth factor, beta 2
involved_in
ISO
(MGI:3830400|PMID:19161227)
RGD
PMID:19161227
MGI:3830400
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
G
Tgfbr1
transforming growth factor, beta receptor 1
involved_in
ISO IEA
(MGI:3820811|PMID:18718461) GO_REF:0000107
RGD Ensembl
PMID:18718461
GO_REF:0000107 MGI:3820811
NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
G
Tgfbr2
transforming growth factor, beta receptor 2
involved_in
ISO IEA
(MGI:3801267|PMID:17050629) GO_REF:0000107
RGD Ensembl
PMID:17050629
GO_REF:0000107 MGI:3801267
NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228
G
Abcb10
ATP binding cassette subfamily B member 10
involved_in
ISO
(MGI:5532911|PMID:22240895)
RGD
PMID:22240895
MGI:5532911
NCBI chr19:51,952,655...51,982,910
Ensembl chr19:51,952,681...51,982,753
G
Acvr1b
activin A receptor type 1B
involved_in
ISO IEA
(PMID:9032295) GO_REF:0000107
RGD Ensembl
PMID:9032295
GO_REF:0000107
NCBI chr 7:132,286,266...132,329,679
Ensembl chr 7:132,286,275...132,329,673
G
Acvr2a
activin A receptor type 2A
involved_in
ISO IEA
(PMID:9032295) GO_REF:0000107
RGD Ensembl
PMID:9032295
GO_REF:0000107
NCBI chr 3:33,204,961...33,292,673
Ensembl chr 3:33,205,523...33,289,968
G
Ankrd54
ankyrin repeat domain 54
involved_in acts_upstream_of_or_within
IEA ISO ISS
GO_REF:0000107 (PMID:19064729) GO_REF:0000024
Ensembl RGD UniProt
PMID:19064729
GO_REF:0000024 GO_REF:0000107
NCBI chr 7:110,614,942...110,627,739
Ensembl chr 7:110,614,951...110,627,675
G
Brd1
bromodomain containing 1
involved_in
ISO
(MGI:5293594|PMID:21753189)
RGD
PMID:21753189
MGI:5293594
NCBI chr 7:119,774,187...119,822,032
Ensembl chr 7:119,774,188...119,822,031
G
ENSRNOG00000063626
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
Ensembl chr 7:108,653,179...108,655,597
G
Ets1
ETS proto-oncogene 1, transcription factor
involved_in
ISO IEA ISS
(PMID:8620536) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:8620536
GO_REF:0000024 GO_REF:0000107
NCBI chr 8:31,045,909...31,168,010
Ensembl chr 8:31,045,945...31,168,010
G
Fam210b
family with sequence similarity 210, member B
involved_in
ISO
(PMID:26968549)
RGD
PMID:26968549
NCBI chr 3:161,118,228...161,128,400
Ensembl chr 3:161,118,239...161,128,397
G
Foxo3
forkhead box O3
acts_upstream_of_or_within
ISO
(PMID:14734530)
RGD
PMID:14734530
NCBI chr20:45,669,708...45,764,606
Ensembl chr20:45,672,995...45,764,561
G
Gata1
GATA binding protein 1
involved_in
ISO
(PMID:17167422)
RGD
PMID:17167422
NCBI chr X:14,529,706...14,537,530
Ensembl chr X:14,529,702...14,537,530
G
Gata2
GATA binding protein 2
acts_upstream_of_or_within
ISO
(PMID:16254139)
RGD
PMID:16254139
NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
G
Hif1a
hypoxia inducible factor 1 subunit alpha
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857719 (PMID:16787915)
Ensembl RGD
PMID:16787915
GO_REF:0000107
NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
G
Hmgb2
high mobility group box 2
involved_in
ISO
(PMID:19965638)
RGD
PMID:19965638
NCBI chr16:32,710,651...32,713,230
Ensembl chr16:32,710,658...32,713,140
G
Hspa1a
heat shock protein family A (Hsp70) member 1A
involved_in
ISO
(PMID:17167422)
RGD
PMID:17167422
NCBI chr20:3,870,765...3,873,221
Ensembl chr20:3,856,006...3,873,227
G
Hspa1b
heat shock protein family A (Hsp70) member 1B
involved_in
ISO
(PMID:17167422)
RGD
PMID:17167422
NCBI chr20:3,855,104...3,859,148
Ensembl chr20:3,856,006...3,873,240 Ensembl chr20:3,856,006...3,873,240
G
Id2
inhibitor of DNA binding 2
acts_upstream_of_or_within
ISO
MGI:2384134 (PMID:18523151)
RGD
PMID:18523151
NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400
G
Inhba
inhibin subunit beta A
involved_in
ISO ISS
(PMID:9032295) GO_REF:0000024
RGD UniProt
PMID:9032295
GO_REF:0000024
NCBI chr17:49,091,635...49,111,573
Ensembl chr17:49,095,920...49,108,982
G
Inpp5d
inositol polyphosphate-5-phosphatase D
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2386884 (PMID:9620849)
Ensembl RGD
PMID:9620849
GO_REF:0000107
NCBI chr 9:88,287,680...88,392,748
Ensembl chr 9:88,287,677...88,392,746
G
Isg15
ISG15 ubiquitin-like modifier
involved_in
ISO
(MGI:5297292|PMID:22022510)
RGD
PMID:22022510
MGI:5297292
NCBI chr 5:166,784,148...166,785,435
Ensembl chr 5:166,784,148...166,785,435
G
Kat7
lysine acetyltransferase 7
involved_in
ISS ISO
GO_REF:0000024 (MGI:5293594|PMID:21753189)
UniProt RGD
PMID:21753189
GO_REF:0000024 MGI:5293594
NCBI chr10:80,221,519...80,255,590
Ensembl chr10:80,221,524...80,255,567
G
Kdm1a
lysine demethylase 1A
involved_in
ISO
(MGI:5284774|PMID:17707228)
RGD
PMID:17707228
MGI:5284774
NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319
G
Mapk11
mitogen-activated protein kinase 11
NOT|involved_in
ISO
(PMID:23483889)
RGD
PMID:23483889
NCBI chr 7:120,218,471...120,225,488
Ensembl chr 7:120,218,478...120,225,395
G
Mapk14
mitogen activated protein kinase 14
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2177830 (PMID:10943842) (PMID:23483889)
Ensembl RGD
PMID:10943842 PMID:23483889
GO_REF:0000107
NCBI chr20:6,749,646...6,810,590
Ensembl chr20:6,749,670...6,810,589
G
Med1
mediator complex subunit 1
involved_in
ISO
(PMID:24245781)
RGD
PMID:24245781
NCBI chr10:83,145,538...83,189,260
Ensembl chr10:83,145,568...83,189,299
G
Mir221
microRNA 221
involved_in
ISO
(PMID:16330772)
RGD
PMID:16330772
NCBI chr X:3,429,465...3,429,573
Ensembl chr X:3,429,465...3,429,573
G
Mir222
microRNA 222
involved_in
ISO
(PMID:16330772)
RGD
PMID:16330772
NCBI chr X:3,428,904...3,429,006
Ensembl chr X:3,428,904...3,429,006
G
Mir486
microRNA 486
involved_in
ISO
(PMID:25857263)
RGD
PMID:25857263
G
Nckap1l
NCK associated protein 1 like
involved_in
ISS ISO
GO_REF:0000024 (MGI:3818191|PMID:19015308)
UniProt RGD
PMID:19015308
GO_REF:0000024 MGI:3818191
NCBI chr 7:134,577,470...134,622,928
Ensembl chr 7:134,577,482...134,622,934
G
Prkdc
protein kinase, DNA-activated, catalytic subunit
involved_in
ISO
(MGI:6414739|PMID:32103174)
RGD
PMID:32103174
MGI:6414739
NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952
G
Prmt1
protein arginine methyltransferase 1
involved_in
ISO IDA
(PMID:23483889)
RGD
PMID:23483889 PMID:23483889
RGD:10047341
NCBI chr 1:95,458,853...95,468,176
Ensembl chr 1:95,458,850...95,468,345
G
Smap1
small ArfGAP 1
acts_upstream_of_or_within
ISO
(PMID:9644265)
RGD
PMID:9644265
NCBI chr 9:26,250,178...26,342,151
Ensembl chr 9:26,249,978...26,342,170
G
Stat1
signal transducer and activator of transcription 1
involved_in
ISO
(PMID:28283061)
RGD
PMID:28283061
NCBI chr 9:49,419,561...49,459,969
Ensembl chr 9:49,419,340...49,588,540
G
Stat3
signal transducer and activator of transcription 3
involved_in
ISO IEA ISS
(PMID:28283061) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:28283061
GO_REF:0000024 GO_REF:0000107
NCBI chr10:85,811,206...85,863,057
Ensembl chr10:85,811,218...85,863,057
G
Stat5b
signal transducer and activator of transcription 5B
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:20702587) GO_REF:0000024
Ensembl RGD UniProt
PMID:20702587
GO_REF:0000024 GO_REF:0000107
NCBI chr10:85,704,841...85,775,856
Ensembl chr10:85,705,670...85,775,668
G
Tal1
TAL bHLH transcription factor 1, erythroid differentiation factor
involved_in
ISO
(PMID:20028976) (MGI:3849640|PMID:19497860)
RGD
PMID:19497860 PMID:20028976
MGI:3849640
NCBI chr 5:128,586,776...128,600,976
Ensembl chr 5:128,587,701...128,600,976
G
Znf16l-ps1
Zinc finger protein 16 like, pseudogene 1
involved_in
ISO
(PMID:16628192)
RGD
PMID:16628192
NCBI chr 7:108,650,889...108,670,242
G
Trim58
tripartite motif-containing 58
involved_in
ISO
(MGI:5908531|PMID:25241935)
RGD
PMID:25241935
MGI:5908531
NCBI chr10:43,022,933...43,038,984
Ensembl chr10:43,022,996...43,034,476
G
Add1
adducin 1
involved_in
ISO IEA IBA
(PMID:25978380) GO_REF:0000107 (MGI:5796260|PMID:25978380) GO_REF:0000118 GO_REF:0000033
RGD Ensembl TreeGrafter GO_Central
PMID:25978380
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:5796260
NCBI chr14:76,108,643...76,167,267
Ensembl chr14:76,108,654...76,167,182
G
Akap11
A-kinase anchoring protein 11
IMP
RGD
PMID:25188285
RGD:14348953
NCBI chr15:53,911,635...53,956,138
Ensembl chr15:53,911,657...53,941,605
G
Cdc45
cell division cycle 45
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr11:82,185,427...82,210,630
Ensembl chr11:82,185,473...82,210,619
G
Cdh5
cadherin 5
involved_in
ISO
(PMID:23288152)
RGD
PMID:23288152
NCBI chr19:815,415...854,478
Ensembl chr19:815,411...854,368
G
Cldn5
claudin 5
involved_in
ISO
(PMID:23288152)
RGD
PMID:23288152
NCBI chr11:82,212,822...82,214,248
Ensembl chr11:82,211,475...82,214,992
G
Dicer1
dicer 1 ribonuclease III
IMP
RGD
PMID:23239824
RGD:149735901
NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
G
F11r
F11 receptor
involved_in
ISO
(PMID:26985018)
RGD
PMID:26985018
NCBI chr13:83,873,797...83,897,388
Ensembl chr13:83,873,797...83,897,402
G
Il4
interleukin 4
involved_in
ISO
(PMID:24280217)
RGD
PMID:24280217
NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750
G
Proc
protein C, inactivator of coagulation factors Va and VIIIa
involved_in
ISO IEA ISS
(PMID:25651845) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:25651845
GO_REF:0000024 GO_REF:0000107
NCBI chr18:23,764,367...23,774,816
Ensembl chr18:23,764,368...23,775,133
G
S1pr2
sphingosine-1-phosphate receptor 2
involved_in
ISO IEA
(PMID:24851274) GO_REF:0000107
RGD Ensembl
PMID:24851274
GO_REF:0000107
NCBI chr 8:19,503,276...19,514,169
Ensembl chr 8:19,502,627...19,523,574
G
Abcb1a
ATP binding cassette subfamily B member 1A
IMP
RGD
PMID:28880272
RGD:13703098
NCBI chr 4:25,357,467...25,529,941
Ensembl chr 4:25,158,362...25,442,709
G
Cftr
CF transmembrane conductance regulator
IMP
RGD
PMID:22777528
RGD:11567213
NCBI chr 4:46,561,269...46,728,759
Ensembl chr 4:46,560,885...46,728,756
G
Gja1
gap junction protein, alpha 1
IMP
RGD
PMID:26678449
RGD:11532443
NCBI chr20:35,756,007...35,768,481
Ensembl chr20:35,755,991...35,768,582
G
Aamdc
adipogenesis associated, Mth938 domain containing
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:22279136)
GO_Central RGD
PMID:22279136
GO_REF:0000033
NCBI chr 1:151,861,990...151,893,621
Ensembl chr 1:151,845,255...151,892,398
G
Adig
adipogenin
involved_in NOT|acts_upstream_of_or_within
ISO
(MGI:2663940|PMID:15567149), (MGI:3715696|PMID:16132694) (PMID:26427354)
RGD
PMID:15567149 PMID:16132694 PMID:26427354
MGI:2663940 MGI:3715696
NCBI chr 3:147,155,079...147,160,412
Ensembl chr 3:147,154,097...147,160,490 Ensembl chr 3:147,154,097...147,160,490
G
Akt1
AKT serine/threonine kinase 1
involved_in
ISO IEA
(PMID:8940145) GO_REF:0000107
RGD Ensembl
PMID:8940145
GO_REF:0000107
NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921
G
Asxl2
ASXL transcriptional regulator 2
involved_in
ISO
(PMID:21047783)
RGD
PMID:21047783
NCBI chr 6:26,425,017...26,514,899
Ensembl chr 6:26,425,954...26,507,477
G
Axin2
axin 2
IMP
RGD
PMID:23996200
RGD:151356748
NCBI chr10:93,893,830...93,927,042
Ensembl chr10:93,899,245...93,926,231
G
Bmp2
bone morphogenetic protein 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:15175325)
Ensembl RGD
PMID:15175325
GO_REF:0000107
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
G
Carm1
coactivator-associated arginine methyltransferase 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:4887324|PMID:18188184)
UniProt RGD
PMID:18188184
GO_REF:0000024 MGI:4887324
NCBI chr 8:20,097,262...20,141,950
Ensembl chr 8:20,097,254...20,147,689
G
Ccdc3
coiled-coil domain containing 3
acts_upstream_of_or_within
ISO
(PMID:25605713)
RGD
PMID:25605713
NCBI chr17:73,031,891...73,135,173
Ensembl chr17:73,035,045...73,135,337
G
Cds1
CDP-diacylglycerol synthase 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:6393010|PMID:26946540)
UniProt RGD
PMID:26946540
GO_REF:0000024 MGI:6393010
NCBI chr14:7,820,328...7,882,943
Ensembl chr14:7,820,351...7,882,681
G
Cebpa
CCAAT/enhancer binding protein alpha
acts_upstream_of_or_within
IMP ISO
(PMID:10937998)
RGD
PMID:10937998 PMID:11731483
RGD:1625374
NCBI chr 1:87,759,631...87,762,303
Ensembl chr 1:87,759,433...87,762,412
G
Cebpb
CCAAT/enhancer binding protein beta
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:3846256|PMID:19324970)
UniProt Ensembl RGD
PMID:19324970
GO_REF:0000024 GO_REF:0000107 MGI:3846256
NCBI chr 3:156,398,035...156,399,466
Ensembl chr 3:156,397,052...156,399,473
G
Cmklr1
chemerin chemokine-like receptor 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:3758402|PMID:17635925)
UniProt RGD
PMID:17635925
GO_REF:0000024 MGI:3758402
NCBI chr12:42,974,462...43,027,321
Ensembl chr12:42,974,410...43,028,129
G
Creb1
cAMP responsive element binding protein 1
involved_in
ISS ISO
GO_REF:0000024 UniProtKB:Q32M00 (MGI:5306541|PMID:21728997)
UniProt RGD
PMID:21728997
GO_REF:0000024 MGI:5306541
NCBI chr 9:65,903,511...65,972,562
Ensembl chr 9:65,903,547...65,970,816
G
Crebl2
cAMP responsive element binding protein-like 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:5306541|PMID:21728997)
UniProt RGD
PMID:21728997
GO_REF:0000024 MGI:5306541
NCBI chr 4:167,673,359...167,699,299
Ensembl chr 4:167,673,315...167,699,292
G
Dact1
dishevelled-binding antagonist of beta-catenin 1
acts_upstream_of_or_within
ISO
(PMID:19073771)
RGD
PMID:19073771
NCBI chr 6:89,790,676...89,818,254
Ensembl chr 6:89,790,644...89,817,906
G
Dkkl1
dickkopf like acrosomal protein 1
acts_upstream_of_or_within
ISO
(PMID:12055200)
RGD
PMID:12055200
NCBI chr 1:95,694,010...95,699,259
Ensembl chr 1:95,694,010...95,699,259
G
Fndc3b
fibronectin type III domain containing 3B
acts_upstream_of_or_within
ISO
MGI:4822558 (PMID:15527760), (PMID:20493170)
RGD
PMID:15527760 PMID:20493170
NCBI chr 2:110,311,439...110,617,504
Ensembl chr 2:110,312,694...110,547,830
G
Frzb
frizzled-related protein
acts_upstream_of_or_within
ISO
(PMID:12055200)
RGD
PMID:12055200
NCBI chr 3:65,332,274...65,365,208
Ensembl chr 3:65,332,277...65,365,208
G
Gdf3
growth differentiation factor 3
involved_in
ISO
(MGI:5825423|PMID:22223106)
RGD
PMID:22223106
MGI:5825423
NCBI chr 4:155,831,572...155,835,953
Ensembl chr 4:155,830,909...155,835,937
G
Htr2a
5-hydroxytryptamine receptor 2A
acts_upstream_of_or_within
ISO
(PMID:20719859)
RGD
PMID:20719859
NCBI chr15:49,950,035...50,022,188
Ensembl chr15:49,950,804...50,020,928
G
Htr2c
5-hydroxytryptamine receptor 2C
acts_upstream_of_or_within
ISO
(PMID:20719859)
RGD
PMID:20719859
NCBI chr X:110,640,777...110,870,288
Ensembl chr X:110,641,153...110,870,287
G
Id2
inhibitor of DNA binding 2
acts_upstream_of_or_within
ISO
MGI:3806370 (PMID:18562627)
RGD
PMID:18562627
NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400
G
Igf1
insulin-like growth factor 1
IDA
RGD
PMID:16897348
RGD:1598452
NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
G
Klf5
KLF transcription factor 5
acts_upstream_of_or_within
ISO
(PMID:20719859)
RGD
PMID:20719859
NCBI chr15:76,060,320...76,079,445
Ensembl chr15:76,064,258...76,079,445
G
Lmo3
LIM domain only 3
involved_in NOT|acts_upstream_of_or_within
ISO
(PMID:23823477)
RGD
PMID:23823477
NCBI chr 4:171,234,686...171,297,677
Ensembl chr 4:171,234,696...171,292,222
G
Lpl
lipoprotein lipase
involved_in
ISO IEA
(PMID:29794473), (PMID:31769250) GO_REF:0000107
RGD Ensembl
PMID:29794473 PMID:31769250
GO_REF:0000107
NCBI chr16:20,830,055...20,853,855
Ensembl chr16:20,829,465...20,855,249
G
Lrp5
LDL receptor related protein 5
involved_in
ISO
(PMID:17680723)
RGD
PMID:17680723
NCBI chr 1:200,814,247...200,917,581
Ensembl chr 1:200,814,250...200,917,581
G
Medag
mesenteric estrogen-dependent adipogenesis
involved_in
ISO
(MGI:5439083|PMID:22510272)
RGD
PMID:22510272
MGI:5439083
NCBI chr12:5,613,191...5,634,583
Ensembl chr12:5,613,208...5,634,767
G
Mir106a
microRNA 106a
acts_upstream_of_or_within
ISO
(PMID:23399447)
RGD
PMID:23399447
NCBI chr X:132,422,584...132,422,661
Ensembl chr X:132,422,584...132,422,661
G
Mir125a
microRNA 125a
IMP
RGD
PMID:29319166
RGD:26884461
NCBI chr 1:58,677,626...58,677,710
Ensembl chr 1:58,677,626...58,677,710
G
Mir17
microRNA 17
acts_upstream_of_or_within
ISO
UniProtKB:P12643 (PMID:23399447)
RGD
PMID:23399447
NCBI chr15:92,180,629...92,180,712
Ensembl chr15:92,180,629...92,180,712
G
Mir204
microRNA 204
IMP
RGD
PMID:29319166
RGD:26884461
NCBI chr 1:220,316,931...220,317,040
Ensembl chr 1:220,316,931...220,317,040
G
Mir21
microRNA 21
involved_in
ISO
(PMID:19816956), (PMID:23239100)
RGD
PMID:19816956 PMID:23239100
NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348
G
Mir29b1
microRNA 29b-1
involved_in
ISO
(PMID:27030318)
RGD
PMID:27030318
NCBI chr 4:59,650,987...59,651,067
Ensembl chr 4:59,650,986...59,651,067
G
Mir29b2
microRNA 29b-2
involved_in
ISO
(PMID:27030318)
RGD
PMID:27030318
NCBI chr13:106,570,371...106,570,451
Ensembl chr13:106,570,367...106,570,456
G
Noct
nocturnin
involved_in
ISS ISO
GO_REF:0000024 (MGI:4457955|PMID:20498072)
UniProt RGD
PMID:20498072
GO_REF:0000024 MGI:4457955
NCBI chr 2:135,271,189...135,291,407
Ensembl chr 2:135,271,189...135,291,400
G
Pparg
peroxisome proliferator-activated receptor gamma
involved_in
IMP ISO
PMID:27910957 (MGI:3846256|PMID:19324970), (MGI:4881351|PMID:21035761)
RGD
PMID:19324970 PMID:21035761 PMID:27910957
MGI:3846256 MGI:4881351 , RGD:38501075
NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
G
Rarres2
retinoic acid receptor responder 2
involved_in
ISO
(MGI:3758402|PMID:17635925)
RGD
PMID:17635925
MGI:3758402
NCBI chr 4:77,522,549...77,525,733
Ensembl chr 4:77,522,535...77,525,556
G
Sav1
salvador family WW domain containing protein 1
acts_upstream_of_or_within
ISO
MGI:1928487 (PMID:22292086)
RGD
PMID:22292086
NCBI chr 6:88,478,536...88,500,121
Ensembl chr 6:88,478,539...88,499,968
G
Sfrp1
secreted frizzled-related protein 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:12055200) (PMID:15886250)
Ensembl RGD
PMID:12055200 PMID:15886250
GO_REF:0000107
NCBI chr16:68,575,763...68,614,180
Ensembl chr16:68,575,763...68,614,286
G
Sfrp2
secreted frizzled-related protein 2
acts_upstream_of_or_within
ISO
(PMID:12055200)
RGD
PMID:12055200
NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063
G
Sh3pxd2b
SH3 and PX domains 2B
involved_in
ISO
(MGI:3826299|PMID:18959745), (MGI:5800302|PMID:27711054)
RGD
PMID:18959745 PMID:27711054
MGI:3826299 MGI:5800302
NCBI chr10:16,918,611...17,027,499
Ensembl chr10:16,918,679...17,005,170
G
Sirt6
sirtuin 6
involved_in
ISO
(MGI:6103696|PMID:28355567)
RGD
PMID:28355567
MGI:6103696
NCBI chr 7:8,082,312...8,087,776
Ensembl chr 7:8,082,364...8,098,914
G
Snai2
snail family transcriptional repressor 2
acts_upstream_of_or_within
ISO
MGI:2447176|MGI:97747 (PMID:17905753)
RGD
PMID:17905753
NCBI chr11:86,182,788...86,186,203
Ensembl chr11:86,181,909...86,186,200
G
Stk3
serine/threonine kinase 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1929004 (PMID:22292086)
Ensembl RGD
PMID:22292086
GO_REF:0000107
NCBI chr 7:66,053,209...66,323,292
Ensembl chr 7:66,052,345...66,323,233
G
Stk4
serine/threonine kinase 4
acts_upstream_of_or_within
ISO
MGI:1928487 (PMID:22292086)
RGD
PMID:22292086
NCBI chr 3:152,745,958...152,827,747
Ensembl chr 3:152,745,681...152,827,744
G
Sult1e1
sulfotransferase family 1E member 1
involved_in
ISO IEA
(PMID:24567372) GO_REF:0000107
RGD Ensembl
PMID:24567372
GO_REF:0000107
NCBI chr14:20,422,324...20,439,562
Ensembl chr14:20,422,324...20,439,275
G
Syap1
synapse associated protein 1
involved_in
ISO
(PMID:23300339) (MGI:6114863|PMID:23300339)
RGD
PMID:23300339
MGI:6114863
NCBI chr X:31,792,180...31,826,672
Ensembl chr X:31,792,193...31,826,667
G
Tmem64
transmembrane protein 64
involved_in
ISO
(MGI:5643786|PMID:25979161)
RGD
PMID:25979161
MGI:5643786
NCBI chr 5:28,698,947...28,745,384
Ensembl chr 5:28,698,918...28,745,330
G
Tph1
tryptophan hydroxylase 1
acts_upstream_of_or_within
ISO
(PMID:20719859)
RGD
PMID:20719859
NCBI chr 1:97,157,375...97,178,415
Ensembl chr 1:97,157,409...97,178,344
G
Trpm4
transient receptor potential cation channel, subfamily M, member 4
IMP
RGD
PMID:23081848
RGD:10003033
NCBI chr 1:95,781,805...95,812,095
Ensembl chr 1:95,782,000...95,812,532
G
Uchl3
ubiquitin C-terminal hydrolase L3
involved_in
ISO
(MGI:4438278|PMID:19837878)
RGD
PMID:19837878
MGI:4438278
NCBI chr15:78,485,304...78,527,355
Ensembl chr15:78,485,315...78,527,355 Ensembl chr 3:78,485,315...78,527,355
G
Wdfy2
WD repeat and FYVE domain containing 2
involved_in
ISO IBA
(PMID:18388859) GO_REF:0000033 (MGI:5693367|PMID:18388859)
RGD GO_Central
PMID:18388859
GO_REF:0000033 MGI:5693367
NCBI chr15:37,083,842...37,209,559
Ensembl chr15:37,042,987...37,209,304
G
Wif1
Wnt inhibitory factor 1
acts_upstream_of_or_within
ISO
(PMID:12055200)
RGD
PMID:12055200
NCBI chr 7:56,548,060...56,618,364
Ensembl chr 7:56,548,053...56,618,360
G
Wnt5b
Wnt family member 5B
acts_upstream_of_or_within
ISO
MGI:98956 (PMID:15796911)
RGD
PMID:15796911
NCBI chr 4:152,609,566...152,733,790
Ensembl chr 4:152,609,569...152,733,407
G
Xbp1
X-box binding protein 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:5496939|PMID:23623498)
UniProt RGD
PMID:23623498
GO_REF:0000024 MGI:5496939
NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
G
Zbtb16
zinc finger and BTB domain containing 16
involved_in
ISS ISO
GO_REF:0000024 (PMID:21547890)
UniProt RGD
PMID:21547890
GO_REF:0000024
NCBI chr 8:48,989,376...49,177,011
Ensembl chr 8:48,994,566...49,177,011
G
Zbtb7c
zinc finger and BTB domain containing 7C
acts_upstream_of_or_within
ISO
(PMID:22331133)
RGD
PMID:22331133
NCBI chr18:69,441,616...69,765,744
Ensembl chr18:69,441,616...69,765,297
G
Zc3h12a
zinc finger CCCH type containing 12A
involved_in
ISO ISS
(PMID:22739135) (MGI:5706914|PMID:19666473) GO_REF:0000024
RGD UniProt
PMID:19666473 PMID:22739135
GO_REF:0000024 MGI:5706914
NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351
G
Zfp36
zinc finger protein 36
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:5784976|PMID:22701344)
UniProt Ensembl RGD
PMID:22701344
GO_REF:0000024 GO_REF:0000107 MGI:5784976
NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564
G
Zfp36l1
zinc finger protein 36, C3H type-like 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:5784976|PMID:22701344)
UniProt RGD
PMID:22701344
GO_REF:0000024 MGI:5784976
NCBI chr 6:98,930,705...98,935,748
Ensembl chr 6:98,930,718...98,935,748
G
Zfp385a
zinc finger protein 385A
acts_upstream_of_or_within
ISO
(PMID:18418387)
RGD
PMID:18418387
NCBI chr 7:134,448,914...134,475,548
Ensembl chr 7:134,448,921...134,475,548
G
Prox1
prospero homeobox 1
involved_in
ISO
(MGI:4849596|PMID:20808958)
RGD
PMID:20808958
MGI:4849596
NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
G
Gimap5
GTPase, IMAP family member 5
IMP
RGD
PMID:11859104
RGD:625608
NCBI chr 4:77,693,417...77,701,025
Ensembl chr 4:77,687,564...77,703,086
G
Lck
LCK proto-oncogene, Src family tyrosine kinase
acts_upstream_of_or_within
ISO
MGI:1857211 (PMID:7807014)
RGD
PMID:7807014
NCBI chr 5:141,888,318...141,916,945
Ensembl chr 5:141,888,326...141,903,794
G
Lef1
lymphoid enhancer binding factor 1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:5486619|PMID:23562159)
UniProt Ensembl RGD
PMID:23562159
GO_REF:0000024 GO_REF:0000107 MGI:5486619
NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794
G
Nckap1l
NCK associated protein 1 like
involved_in
ISS ISO
GO_REF:0000024 (MGI:3818191|PMID:19015308)
UniProt RGD
PMID:19015308
GO_REF:0000024 MGI:3818191
NCBI chr 7:134,577,470...134,622,928
Ensembl chr 7:134,577,482...134,622,934
G
Ptprc
protein tyrosine phosphatase, receptor type, C
acts_upstream_of_or_within
ISO
MGI:2181288 (PMID:7807014)
RGD
PMID:7807014
NCBI chr13:49,596,193...49,708,283
Ensembl chr13:49,596,193...49,708,692
G
Sox13
SRY-box transcription factor 13
involved_in
ISO
(MGI:5486619|PMID:23562159)
RGD
PMID:23562159
MGI:5486619
NCBI chr13:44,831,097...44,875,522
Ensembl chr13:44,831,085...44,875,762
G
Sox4
SRY-box transcription factor 4
involved_in
ISO
(MGI:5486619|PMID:23562159)
RGD
PMID:23562159
MGI:5486619
NCBI chr17:35,667,809...35,672,515
Ensembl chr17:35,667,537...35,673,665
G
Stat5a
signal transducer and activator of transcription 5A
acts_upstream_of_or_within
ISO
MGI:103035 (PMID:15294943)
RGD
PMID:15294943
NCBI chr10:85,785,537...85,809,869
Ensembl chr10:85,785,537...85,809,866
G
Stat5b
signal transducer and activator of transcription 5B
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:103036 (PMID:15294943)
Ensembl RGD
PMID:15294943
GO_REF:0000107
NCBI chr10:85,704,841...85,775,856
Ensembl chr10:85,705,670...85,775,668
G
Syk
spleen associated tyrosine kinase
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857421|MGI:2384078 (PMID:7477352), (PMID:8790395)
Ensembl RGD
PMID:7477352 PMID:8790395
GO_REF:0000107
NCBI chr17:12,604,615...12,678,437
Ensembl chr17:12,604,619...12,661,410
G
Hes1
hes family bHLH transcription factor 1
IMP
RGD
PMID:10839357
RGD:704354
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
G
Il1b
interleukin 1 beta
IDA
RGD
PMID:23168994
RGD:7175538
NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
G
Notch1
notch receptor 1
IMP
RGD
PMID:12853432
RGD:1358543
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Ntf3
neurotrophin 3
IDA
RGD
PMID:15139015
RGD:1358328
NCBI chr 4:158,914,984...158,984,453
Ensembl chr 4:158,914,957...158,984,596
G
Rnf112
ring finger protein 112
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:21566658)
Ensembl RGD
PMID:21566658
GO_REF:0000107
NCBI chr10:46,121,146...46,126,691
Ensembl chr10:46,121,148...46,126,699
G
Rtn4
reticulon 4
IDA
RGD
PMID:19379790
RGD:2314929
NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686
G
Spint1
serine peptidase inhibitor, Kunitz type 1
IMP
RGD
PMID:23409135
RGD:10043095
NCBI chr 3:106,231,082...106,244,121
Ensembl chr 3:106,231,444...106,244,119
G
Arrb2
arrestin, beta 2
IMP
RGD
PMID:19014370
RGD:401938609
NCBI chr10:55,146,887...55,154,854
Ensembl chr10:55,146,818...55,154,850
G
Atxn1
ataxin 1
acts_upstream_of_or_within
ISO
(PMID:20531390)
RGD
PMID:20531390
NCBI chr17:18,737,491...19,142,360
Ensembl chr17:18,737,533...19,142,360
G
Cysltr1
cysteinyl leukotriene receptor 1
IMP
RGD
PMID:17910051
RGD:5144007
NCBI chr X:71,661,421...71,690,012
Ensembl chr X:71,663,821...71,690,121
G
E2f1
E2F transcription factor 1
IMP
RGD
PMID:21637599
RGD:13702469
NCBI chr 3:143,064,535...143,075,362
Ensembl chr 3:143,049,478...143,075,361
G
Egfr
epidermal growth factor receptor
IMP
RGD
PMID:10616092
RGD:38599219
NCBI chr14:91,176,979...91,349,722
Ensembl chr14:91,177,067...91,344,382
G
Etv5
ETS variant transcription factor 5
IMP
RGD
PMID:12297104
RGD:2316288
NCBI chr11:78,608,618...78,666,221
Ensembl chr11:78,608,710...78,666,215
G
Flt1
Fms related receptor tyrosine kinase 1
IMP
RGD
PMID:18482723
RGD:10402148
NCBI chr12:7,296,899...7,468,626
Ensembl chr12:7,297,292...7,468,626
G
Gfap
glial fibrillary acidic protein
IMP
RGD
PMID:21250919
RGD:6480511
NCBI chr10:87,852,891...87,861,631
Ensembl chr10:87,852,890...87,861,589
G
Igf1
insulin-like growth factor 1
IDA
RGD
PMID:24262632
RGD:12904964
NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
G
Il1b
interleukin 1 beta
involved_in
ISO
UniProtKB:P01375 (PMID:1752215)
RGD
PMID:1752215
NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
G
Il6
interleukin 6
involved_in
ISO
(PMID:2104886)
RGD
PMID:2104886
NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
G
Kras
KRAS proto-oncogene, GTPase
acts_upstream_of_or_within
ISO
MGI:97306 (PMID:15665300)
RGD
PMID:15665300
NCBI chr 4:178,185,418...178,218,484
G
Lta
lymphotoxin alpha
IMP
RGD
PMID:11595667
RGD:8548857
NCBI chr20:3,618,853...3,621,324
Ensembl chr20:3,618,853...3,620,859
G
Lyn
LYN proto-oncogene, Src family tyrosine kinase
IDA
RGD
PMID:15504915
RGD:2303714
NCBI chr 5:16,639,512...16,755,501
Ensembl chr 5:16,639,466...16,756,868
G
Mecp2
methyl CpG binding protein 2
acts_upstream_of_or_within
ISO
(PMID:15939091)
RGD
PMID:15939091
NCBI chr X:151,781,177...151,844,687
Ensembl chr X:151,789,930...151,844,689
G
Mir125b1
microRNA 125b-1
involved_in
ISO
(PMID:20347935)
RGD
PMID:20347935
NCBI chr 8:41,952,966...41,953,052
Ensembl chr 8:41,952,966...41,953,052
G
Mir125b2
microRNA 125b-2
involved_in
ISO
(PMID:20347935)
RGD
PMID:20347935
NCBI chr11:16,245,620...16,245,707
G
Mtor
mechanistic target of rapamycin kinase
IMP
RGD
PMID:19576187
RGD:10041012
NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
G
Myb
MYB proto-oncogene, transcription factor
IMP
RGD
PMID:12599418
RGD:11532679
NCBI chr 1:15,939,771...15,973,367
Ensembl chr 1:15,939,761...15,973,057
G
Myc
MYC proto-oncogene, bHLH transcription factor
IMP
RGD
PMID:9316053
RGD:10059624
NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
G
Ntn1
netrin 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1927548 (PMID:16481423)
Ensembl RGD
PMID:16481423
GO_REF:0000107
NCBI chr10:52,899,933...53,098,591
Ensembl chr10:52,899,934...53,085,326
G
Plag1
PLAG1 zinc finger
involved_in
ISO
(MGI:5285167|PMID:19808959)
RGD
PMID:19808959
MGI:5285167
NCBI chr 5:16,902,057...16,956,727
Ensembl chr 5:16,905,394...16,913,647
G
Ppp1cc
protein phosphatase 1 catalytic subunit gamma
IMP
RGD
PMID:29033188
RGD:13514047
NCBI chr12:34,383,072...34,400,553
Ensembl chr12:34,383,072...34,400,553
G
Prkch
protein kinase C, eta
involved_in
ISO ISS
(PMID:10806212) GO_REF:0000024
RGD UniProt
PMID:10806212
GO_REF:0000024
NCBI chr 6:92,292,000...92,490,663
Ensembl chr 6:92,292,000...92,490,654
G
Prkci
protein kinase C, iota
involved_in
ISO ISS
(PMID:21419810) GO_REF:0000024
RGD UniProt
PMID:21419810
GO_REF:0000024
NCBI chr 2:112,321,919...112,382,305
Ensembl chr 2:112,321,929...112,382,352
G
Ptk2
protein tyrosine kinase 2
IMP
RGD
PMID:12838510
RGD:2292612
NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783
G
Slc7a5
solute carrier family 7 member 5
IMP
RGD
PMID:16496379
RGD:151361115
NCBI chr19:49,935,220...49,963,823
Ensembl chr19:49,935,220...49,963,823
G
Tnf
tumor necrosis factor
involved_in
ISO
UniProtKB:P01584 (PMID:1752215), (PMID:2104886)
RGD
PMID:1752215 PMID:2104886
NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
G
Tspo
translocator protein
IDA
RGD
PMID:18190798
RGD:2317142
NCBI chr 7:114,720,188...114,730,450
Ensembl chr 7:114,720,188...114,730,450
G
Ufl1
Ufm1-specific ligase 1
acts_upstream_of_or_within
ISO
(PMID:20531390)
RGD
PMID:20531390
NCBI chr 5:38,962,721...38,995,134
Ensembl chr 5:38,962,171...38,995,199
G
Vegfc
vascular endothelial growth factor C
acts_upstream_of_or_within
ISO
MGI:3026650 (PMID:16462734)
RGD
PMID:16462734
NCBI chr16:37,712,251...37,827,845
Ensembl chr16:37,712,262...37,827,848
G
Vim
vimentin
IMP
RGD
PMID:21250919
RGD:6480511
NCBI chr17:76,668,701...76,677,186
Ensembl chr17:76,668,647...76,677,187
G
Il6
interleukin 6
involved_in
ISO
(MGI:5662144|PMID:26134658)
RGD
PMID:26134658
MGI:5662144
NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
G
Sox10
SRY-box transcription factor 10
involved_in
ISO
(MGI:3527299|PMID:15572147)
RGD
PMID:15572147
MGI:3527299
NCBI chr 7:110,725,274...110,734,651
Ensembl chr 7:110,725,274...110,735,544
G
Sox8
SRY-box transcription factor 8
involved_in
ISS ISO
GO_REF:0000024 (MGI:3527299|PMID:15572147)
UniProt RGD
PMID:15572147
GO_REF:0000024 MGI:3527299
NCBI chr10:14,584,829...14,589,818
Ensembl chr10:14,584,829...14,589,818
G
Synj1
synaptojanin 1
IMP
RGD
PMID:19282871
RGD:2312448
NCBI chr11:30,192,629...30,269,447
Ensembl chr11:30,192,629...30,269,220
G
Pax6
paired box 6
IMP
RGD
PMID:24030726
RGD:12790968
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
G
Evi2b
ecotropic viral integration site 2B
involved_in
ISO
(PMID:28186500)
RGD
PMID:28186500
NCBI chr10:64,472,693...64,474,311
Ensembl chr10:64,471,505...64,481,560
G
Gfi1b
growth factor independent 1B transcriptional repressor
involved_in
ISO
(MGI:5284774|PMID:17707228)
RGD
PMID:17707228
MGI:5284774
NCBI chr 3:11,940,232...11,952,989
Ensembl chr 3:11,940,233...11,952,942
G
Hax1
HCLS1 associated protein X-1
involved_in
ISO
(PMID:23001182)
RGD
PMID:23001182
NCBI chr 2:175,434,242...175,437,926
Ensembl chr 2:175,434,238...175,437,714
G
Hcls1
hematopoietic cell specific Lyn substrate 1
involved_in
ISO
(PMID:23001182) (MGI:5448611|PMID:23001182)
RGD
PMID:23001182
MGI:5448611
NCBI chr11:63,817,482...63,840,943
Ensembl chr11:63,817,476...63,841,014
G
Lef1
lymphoid enhancer binding factor 1
involved_in
ISO IEA
(PMID:19620402), (PMID:23001182) GO_REF:0000107
RGD Ensembl
PMID:19620402 PMID:23001182
GO_REF:0000107
NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794
G
Mir223
microRNA 223
acts_upstream_of_or_within
ISO
MGI:3811186 (PMID:18278031)
RGD
PMID:18278031
NCBI chr X:61,141,887...61,141,996
Ensembl chr X:61,141,887...61,141,996
G
Mir486
microRNA 486
involved_in
ISO
(PMID:25857263)
RGD
PMID:25857263
G
Runx1
RUNX family transcription factor 1
involved_in
ISO IEA ISS
(PMID:9199349) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:9199349
GO_REF:0000024 GO_REF:0000107
NCBI chr11:31,839,880...32,074,427
Ensembl chr11:31,843,764...32,074,542
G
Tesc
tescalcin
involved_in
ISO IBA
(PMID:20060826) GO_REF:0000033
RGD GO_Central
PMID:20060826
GO_REF:0000033
NCBI chr12:38,521,832...38,555,665
Ensembl chr12:38,521,861...38,555,824
G
Tescl
tescalcin-like
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:79,896,554...79,920,998
Ensembl chr 1:79,920,075...79,920,985
G
Dhx36
DEAH-box helicase 36
involved_in
ISS ISO
GO_REF:0000024 (MGI:5427564|PMID:22422825)
UniProt RGD
PMID:22422825
GO_REF:0000024 MGI:5427564
NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572
G
Flt1
Fms related receptor tyrosine kinase 1
acts_upstream_of_or_within
ISO
MGI:1857717 (PMID:18772315)
RGD
PMID:18772315
NCBI chr12:7,296,899...7,468,626
Ensembl chr12:7,297,292...7,468,626
G
Foxc1
forkhead box C1
involved_in
ISO
(MGI:5569870|PMID:24590069)
RGD
PMID:24590069
MGI:5569870
NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803
G
Il3
interleukin 3
acts_upstream_of_or_within
ISO
MGI:96974 (PMID:1375116), (PMID:7690439)
RGD
PMID:1375116 PMID:7690439
NCBI chr10:38,405,716...38,408,066
Ensembl chr10:38,405,716...38,408,066
G
Kitlg
KIT ligand
acts_upstream_of_or_within
ISO
MGI:96552 (PMID:1375116), (PMID:7690439)
RGD
PMID:1375116 PMID:7690439
NCBI chr 7:34,896,075...34,977,215
Ensembl chr 7:34,896,053...34,977,214
G
Foxc1
forkhead box C1
involved_in
ISO
(MGI:5569870|PMID:24590069)
RGD
PMID:24590069
MGI:5569870
NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803
G
Bmp4
bone morphogenetic protein 4
IMP
RGD
PMID:19229878
RGD:8885195
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Foxa3
forkhead box A3
IMP
RGD
PMID:9878541
RGD:2315086
NCBI chr 1:78,662,067...78,672,321
Ensembl chr 1:78,662,431...78,672,155
G
Mesp1
mesoderm posterior bHLH transcription factor 1
involved_in
ISO
(MGI:4441249|PMID:18593560)
RGD
PMID:18593560
MGI:4441249
NCBI chr 1:133,738,357...133,739,875
Ensembl chr 1:133,738,357...133,739,875
G
Atoh1
atonal bHLH transcription factor 1
acts_upstream_of_or_within
ISO
(PMID:11023859), (PMID:19154718)
RGD
PMID:11023859 PMID:19154718
NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154
G
Fgf2
fibroblast growth factor 2
acts_upstream_of_or_within
ISO
(PMID:12417662)
RGD
PMID:12417662
NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
G
Atoh1
atonal bHLH transcription factor 1
involved_in acts_upstream_of_or_within
ISO
(MGI:3625195|PMID:12208538) MGI:3767172 (PMID:21146598)
RGD
PMID:12208538 PMID:21146598
MGI:3625195
NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154
G
Tlr9
toll-like receptor 9
involved_in
ISO
(MGI:4399015|PMID:17128265)
RGD
PMID:17128265
MGI:4399015
NCBI chr 8:106,864,680...106,868,796
Ensembl chr 8:106,864,680...106,868,796
G
Alox15b
arachidonate 15-lipoxygenase, type B
involved_in
IEA ISO
GO_REF:0000107 (MGI:3784332|PMID:10965849)
Ensembl RGD
PMID:10965849
GO_REF:0000107 MGI:3784332
NCBI chr10:53,892,496...53,901,812
Ensembl chr10:53,892,466...53,901,812
G
Cyp27b1
cytochrome P450, family 27, subfamily b, polypeptide 1
involved_in
ISO IEA
(PMID:12496369) GO_REF:0000107
RGD Ensembl
PMID:12496369
GO_REF:0000107
NCBI chr 7:62,869,340...62,876,242
Ensembl chr 7:62,871,297...62,876,241
G
Etv4
ETS variant transcription factor 4
involved_in
ISO
(PMID:31552090)
RGD
PMID:31552090
NCBI chr10:86,706,749...86,721,974
Ensembl chr10:86,706,749...86,721,974
G
Foxc1
forkhead box C1
involved_in
ISO
(PMID:27907090)
RGD
PMID:27907090
NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803
G
Macroh2a1
macroH2A.1 histone
involved_in
ISO
(PMID:23595991)
RGD
PMID:23595991
NCBI chr17:8,479,331...8,542,071
Ensembl chr17:8,479,372...8,542,072
G
Macroh2a2
macroH2A.2 histone
involved_in
ISO
(PMID:23595991)
RGD
PMID:23595991
NCBI chr20:29,678,194...29,727,867
Ensembl chr20:29,678,222...29,727,891
G
Med1
mediator complex subunit 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:17082781)
UniProt RGD
PMID:17082781
GO_REF:0000024
NCBI chr10:83,145,538...83,189,260
Ensembl chr10:83,145,568...83,189,299
G
Mir125b1
microRNA 125b-1
acts_upstream_of
ISO
(PMID:21412257)
RGD
PMID:21412257
NCBI chr 8:41,952,966...41,953,052
Ensembl chr 8:41,952,966...41,953,052
G
Mir125b2
microRNA 125b-2
acts_upstream_of
ISO
(PMID:21412257)
RGD
PMID:21412257
NCBI chr11:16,245,620...16,245,707
G
Ncoa3
nuclear receptor coactivator 3
involved_in
ISO IEA
(PMID:17082781), (PMID:17223341) GO_REF:0000107
RGD Ensembl
PMID:17082781 PMID:17223341
GO_REF:0000107
NCBI chr 3:154,738,566...154,821,395
Ensembl chr 3:154,738,581...154,818,594
G
Nme2
NME/NM23 nucleoside diphosphate kinase 2
involved_in
ISO ISS
(PMID:16862176) GO_REF:0000024
RGD HGNC-UCL
PMID:16862176
GO_REF:0000024
NCBI chr10:78,898,097...78,903,514
Ensembl chr10:78,897,770...78,903,538
G
Notch1
notch receptor 1
acts_upstream_of_or_within
ISO
MGI:1330810 (PMID:16618808), (PMID:17079689)
RGD
PMID:16618808 PMID:17079689
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Numa1
nuclear mitotic apparatus protein 1
involved_in
ISO
(MGI:5754878|PMID:26765568)
RGD
PMID:26765568
MGI:5754878
NCBI chr 1:156,297,907...156,372,855
Ensembl chr 1:156,326,259...156,372,855
G
Ovol2
ovo-like zinc finger 2
acts_upstream_of_or_within
ISO
(PMID:24735878)
RGD
PMID:24735878
NCBI chr 3:131,677,391...131,707,123
Ensembl chr 3:131,677,391...131,708,359
G
Prkch
protein kinase C, eta
involved_in
ISS ISO
GO_REF:0000024 (MGI:5306545|PMID:21346190)
UniProt RGD
PMID:21346190
GO_REF:0000024 MGI:5306545
NCBI chr 6:92,292,000...92,490,663
Ensembl chr 6:92,292,000...92,490,654
G
Trim16
tripartite motif-containing 16
involved_in
ISO
(PMID:11919186)
RGD
PMID:11919186
NCBI chr10:47,485,982...47,509,010
Ensembl chr10:47,486,297...47,551,907
G
Vdr
vitamin D receptor
involved_in
ISO IEA
(PMID:17082781) GO_REF:0000107
RGD Ensembl
PMID:17082781
GO_REF:0000107
NCBI chr 7:128,987,981...129,037,677
Ensembl chr 7:128,987,981...129,037,677
G
Shh
sonic hedgehog signaling molecule
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:2388350|PMID:12399320) GO_REF:0000024
Ensembl RGD UniProt
PMID:12399320
GO_REF:0000024 GO_REF:0000107 MGI:2388350
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Fgf2
fibroblast growth factor 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:29501879)
UniProt RGD
PMID:29501879
GO_REF:0000024
NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
G
Zeb2
zinc finger E-box binding homeobox 2
involved_in
ISO
(MGI:3604916|PMID:16162653)
RGD
PMID:16162653
MGI:3604916
NCBI chr 3:29,214,581...29,344,890
Ensembl chr 3:29,218,301...29,345,157
G
Bdnf
brain-derived neurotrophic factor
IMP
RGD
PMID:14699417
RGD:4891114
NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
G
Ephb2
Eph receptor B2
acts_upstream_of_or_within
ISO
MGI:2149765 (PMID:11754836)
RGD
PMID:11754836
NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
G
Fmr1
fragile X messenger ribonucleoprotein 1
involved_in
IMP IBA
GO_REF:0000033
GO_Central RGD
PMID:28894415
GO_REF:0000033, RGD:38501107
NCBI chr X:147,240,239...147,278,057
Ensembl chr X:147,240,301...147,278,050
G
Fxr1
FMR1 autosomal homolog 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:116,884,167...116,937,590
Ensembl chr 2:116,884,248...116,937,590
G
Fxr2
FMR1 autosomal homolog 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:54,350,577...54,370,964
Ensembl chr10:54,350,131...54,370,964
G
Grm5
glutamate metabotropic receptor 5
IDA
RGD
PMID:12740378
RGD:731147
NCBI chr 1:141,310,069...141,884,980
Ensembl chr 1:141,312,368...141,882,274
G
Kdr
kinase insert domain receptor
IMP
RGD
PMID:18221855
RGD:2292019
NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
G
Kit
KIT proto-oncogene receptor tyrosine kinase
IMP
RGD
PMID:11112797
RGD:2292520
NCBI chr14:32,547,459...32,624,694
Ensembl chr14:32,548,877...32,624,652
G
Neurl1
neuralized E3 ubiquitin protein ligase 1
involved_in
ISO
(MGI:5300629|PMID:22153079)
RGD
PMID:22153079
MGI:5300629
NCBI chr 1:246,066,830...246,152,890
Ensembl chr 1:246,067,100...246,152,903
G
Nptn
neuroplastin
involved_in
IMP
PMID:10759566
HGNC-UCL
PMID:10759566
RGD:8553916
NCBI chr 8:58,996,873...59,063,402
Ensembl chr 8:58,996,887...59,063,401
G
Shank3
SH3 and multiple ankyrin repeat domains 3
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:5285139|PMID:21167025) GO_REF:0000024
Ensembl RGD BHF-UCL
PMID:21167025
GO_REF:0000024 GO_REF:0000107 MGI:5285139
NCBI chr 7:120,568,707...120,630,796
Ensembl chr 7:120,570,402...120,630,374
G
Foxj1
forkhead box J1
involved_in
ISO IEA
(PMID:20539013) GO_REF:0000107
RGD Ensembl
PMID:20539013
GO_REF:0000107
NCBI chr10:101,566,299...101,570,370
Ensembl chr10:101,566,304...101,570,237
G
Tp73
tumor protein p73
involved_in
ISO
(PMID:34077761)
RGD
PMID:34077761
NCBI chr 5:164,621,377...164,703,958
Ensembl chr 5:164,621,377...164,681,128
G
Inpp5d
inositol polyphosphate-5-phosphatase D
acts_upstream_of_or_within
ISO
MGI:2386884 (PMID:9620849)
RGD
PMID:9620849
NCBI chr 9:88,287,680...88,392,748
Ensembl chr 9:88,287,677...88,392,746
G
Nckap1l
NCK associated protein 1 like
involved_in
ISS ISO
GO_REF:0000024 (MGI:3818191|PMID:19015308)
UniProt RGD
PMID:19015308
GO_REF:0000024 MGI:3818191
NCBI chr 7:134,577,470...134,622,928
Ensembl chr 7:134,577,482...134,622,934
G
Prkdc
protein kinase, DNA-activated, catalytic subunit
involved_in
ISO
(MGI:6414739|PMID:32103174)
RGD
PMID:32103174
MGI:6414739
NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952
G
Stat5a
signal transducer and activator of transcription 5A
acts_upstream_of_or_within
ISO
MGI:103035 (PMID:15294943)
RGD
PMID:15294943
NCBI chr10:85,785,537...85,809,869
Ensembl chr10:85,785,537...85,809,866
G
Stat5b
signal transducer and activator of transcription 5B
acts_upstream_of_or_within
ISO
MGI:103036 (PMID:15294943)
RGD
PMID:15294943
NCBI chr10:85,704,841...85,775,856
Ensembl chr10:85,705,670...85,775,668
G
Xrcc6
X-ray repair cross complementing 6
involved_in
ISO
(MGI:6414739|PMID:32103174)
RGD
PMID:32103174
MGI:6414739
NCBI chr 7:113,542,992...113,563,762
Ensembl chr 7:113,543,057...113,563,762
G
Znhit1
zinc finger, HIT-type containing 1
involved_in
ISO
(MGI:6106288|PMID:29138493)
RGD
PMID:29138493
MGI:6106288
NCBI chr12:19,686,606...19,692,880
Ensembl chr12:19,686,148...19,692,880
G
Agt
angiotensinogen
involved_in
ISO IEA
(PMID:18971559) GO_REF:0000107
RGD Ensembl
PMID:18971559
GO_REF:0000107
NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
G
Agtr1a
angiotensin II receptor, type 1a
involved_in
ISO
(PMID:18971559)
RGD
PMID:18971559
NCBI chr17:34,173,446...34,226,892
Ensembl chr17:34,174,429...34,226,946
G
Alox15b
arachidonate 15-lipoxygenase, type B
involved_in
ISO IEA
(PMID:22912809) GO_REF:0000107
RGD Ensembl
PMID:22912809
GO_REF:0000107
NCBI chr10:53,892,496...53,901,812
Ensembl chr10:53,892,466...53,901,812
G
Apob
apolipoprotein B
involved_in
ISO IEA
(PMID:17244792), (PMID:18322245), (PMID:19114110) GO_REF:0000107
RGD Ensembl
PMID:17244792 PMID:18322245 PMID:19114110
GO_REF:0000107
NCBI chr 6:30,844,386...30,883,983
Ensembl chr 6:30,844,368...30,892,497
G
Cd36
CD36 molecule
involved_in
ISO IEA
(PMID:10772654) GO_REF:0000107 (MGI:2447499|PMID:12376530), (MGI:3836139|PMID:10772654)
RGD Ensembl
PMID:10772654 PMID:12376530
GO_REF:0000107 MGI:2447499 MGI:3836139
NCBI chr 4:17,317,343...17,410,084
Ensembl chr 4:17,354,466...17,513,903
G
Csf1
colony stimulating factor 1
involved_in
ISO IEA
(PMID:17244792) GO_REF:0000107
RGD Ensembl
PMID:17244792
GO_REF:0000107
NCBI chr 2:195,377,215...195,396,608
Ensembl chr 2:195,377,215...195,411,704
G
Csf2
colony stimulating factor 2
involved_in
ISO
(PMID:19032770)
RGD
PMID:19032770
NCBI chr10:38,386,945...38,388,926
Ensembl chr10:38,386,945...38,389,199
G
Il18
interleukin 18
involved_in
IEA ISO
GO_REF:0000107 (MGI:3608083|PMID:12829194)
Ensembl RGD
PMID:12829194
GO_REF:0000107 MGI:3608083
NCBI chr 8:50,904,630...50,932,887
Ensembl chr 8:50,906,960...50,932,887
G
Lpl
lipoprotein lipase
involved_in
ISO IEA
UniProtKB:P35951 (MGI:1888585|PMID:10858435) GO_REF:0000107
RGD Ensembl
PMID:10858435
GO_REF:0000107 MGI:1888585
NCBI chr16:20,830,055...20,853,855
Ensembl chr16:20,829,465...20,855,249
G
Mapk9
mitogen-activated protein kinase 9
involved_in
ISO IEA
(PMID:18262097) GO_REF:0000107
RGD Ensembl
PMID:18262097
GO_REF:0000107
NCBI chr10:34,169,661...34,211,138
Ensembl chr10:34,169,675...34,210,178
G
Mir185
microRNA 185
involved_in
ISO
(PMID:26523989)
RGD
PMID:26523989
NCBI chr11:82,664,716...82,664,795
Ensembl chr11:82,664,716...82,664,795
G
Msr1
macrophage scavenger receptor 1
involved_in
ISO
UniProtKB:Q08857 (MGI:2447499|PMID:12376530)
RGD
PMID:12376530
MGI:2447499
NCBI chr16:52,717,775...52,803,602
Ensembl chr16:52,717,732...52,799,676
G
Pf4
platelet factor 4
involved_in
ISO
(PMID:17244792)
RGD
PMID:17244792
NCBI chr14:17,298,304...17,299,220
Ensembl chr14:17,298,308...17,299,365
G
Pla2g3
phospholipase A2, group III
involved_in
ISO
(PMID:18801741)
RGD
PMID:18801741
NCBI chr14:78,367,625...78,373,913
Ensembl chr14:78,368,105...78,373,913
G
Pla2g5
phospholipase A2, group V
involved_in
ISS ISO
GO_REF:0000024 (MGI:6393145|PMID:14962950)
UniProt RGD
PMID:14962950
GO_REF:0000024 MGI:6393145
NCBI chr 5:151,041,339...151,109,433
Ensembl chr 5:151,041,340...151,062,658
G
Prkch
protein kinase C, eta
involved_in
ISS ISO
GO_REF:0000024 (MGI:5306557|PMID:20558593)
UniProt RGD
PMID:20558593
GO_REF:0000024 MGI:5306557
NCBI chr 6:92,292,000...92,490,663
Ensembl chr 6:92,292,000...92,490,654
G
Asxl2
ASXL transcriptional regulator 2
acts_upstream_of_or_within
ISO
(PMID:21490954)
RGD
PMID:21490954
NCBI chr 6:26,425,017...26,514,899
Ensembl chr 6:26,425,954...26,507,477
G
Calca
calcitonin-related polypeptide alpha
involved_in
ISO
(PMID:10822112)
RGD
PMID:10822112
NCBI chr 1:168,878,212...168,883,176
Ensembl chr 1:168,878,214...168,883,105
G
Casp8
caspase 8
involved_in
ISO
(PMID:17047155)
RGD
PMID:17047155
NCBI chr 9:60,263,863...60,312,542
Ensembl chr 9:60,264,075...60,312,542
G
Csf1
colony stimulating factor 1
involved_in acts_upstream_of_or_within
ISO IEA IBA
(PMID:2460758) MGI:1856333 (PMID:9215625) GO_REF:0000118 GO_REF:0000033 GO_REF:0000107
RGD TreeGrafter GO_Central Ensembl
PMID:2460758 PMID:9215625
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118
NCBI chr 2:195,377,215...195,396,608
Ensembl chr 2:195,377,215...195,411,704
G
Csf2
colony stimulating factor 2
TAS
RGD
PMID:14504066
RGD:727979
NCBI chr10:38,386,945...38,388,926
Ensembl chr10:38,386,945...38,389,199
G
Fadd
Fas associated via death domain
involved_in
ISO
(PMID:17047155)
RGD
PMID:17047155
NCBI chr 1:199,743,200...199,745,746
Ensembl chr 1:199,739,994...199,745,653
G
Hcls1
hematopoietic cell specific Lyn substrate 1
involved_in
ISO
(MGI:5448611|PMID:23001182)
RGD
PMID:23001182
MGI:5448611
NCBI chr11:63,817,482...63,840,943
Ensembl chr11:63,817,476...63,841,014
G
Hsf1
heat shock transcription factor 1
involved_in
ISO
(PMID:24504023)
RGD
PMID:24504023
NCBI chr 7:108,196,040...108,223,011
Ensembl chr 7:108,196,056...108,223,011
G
Id2
inhibitor of DNA binding 2
acts_upstream_of_or_within
ISO
MGI:97874 (PMID:15616565)
RGD
PMID:15616565
NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400
G
Il34
interleukin 34
involved_in
ISO IBA IEA
(PMID:23409120) GO_REF:0000033 GO_REF:0000107
RGD GO_Central Ensembl
PMID:23409120
GO_REF:0000033 GO_REF:0000107
NCBI chr19:38,714,990...38,782,749
Ensembl chr19:38,714,991...38,764,000
G
Lif
LIF, interleukin 6 family cytokine
acts_upstream_of_or_within
ISO
(PMID:7957045)
RGD
PMID:7957045
NCBI chr14:79,131,049...79,140,486
Ensembl chr14:79,134,574...79,140,482
G
Mir145
microRNA 145
acts_upstream_of
ISO
(PMID:30634164)
RGD
PMID:30634164
NCBI chr18:55,099,640...55,099,727
Ensembl chr18:55,099,640...55,099,727
G
Pf4
platelet factor 4
involved_in
ISO
(PMID:10666185)
RGD
PMID:10666185
NCBI chr14:17,298,304...17,299,220
Ensembl chr14:17,298,308...17,299,365
G
Prkca
protein kinase C, alpha
involved_in
ISS ISO
GO_REF:0000024 (MGI:5306334|PMID:9508782)
UniProt RGD
PMID:9508782
GO_REF:0000024 MGI:5306334
NCBI chr10:92,889,390...93,288,013
Ensembl chr10:92,894,012...93,288,012
G
Rb1
RB transcriptional corepressor 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:96397 (PMID:15616565)
Ensembl RGD
PMID:15616565
GO_REF:0000107
NCBI chr15:48,371,295...48,502,473
Ensembl chr15:48,371,296...48,502,302
G
Ripk1
receptor interacting serine/threonine kinase 1
involved_in
ISO
(PMID:17047155)
RGD
PMID:17047155
NCBI chr17:30,839,639...30,871,824
Ensembl chr17:30,839,650...30,871,824
G
Ror2
receptor tyrosine kinase-like orphan receptor 2
IMP
RGD
PMID:25749876
RGD:11537353
NCBI chr17:11,972,830...12,148,152
Ensembl chr17:11,972,830...12,148,152
G
Trib1
tribbles pseudokinase 1
involved_in
ISO
(MGI:5488531|PMID:23515163)
RGD
PMID:23515163
MGI:5488531
NCBI chr 7:91,206,579...91,213,126
Ensembl chr 7:91,206,579...91,214,731
G
Itgam
integrin subunit alpha M
involved_in
ISO
(MGI:1328479|PMID:9862668)
RGD
PMID:9862668
MGI:1328479
NCBI chr 1:182,659,047...182,709,501
Ensembl chr 1:182,659,000...182,709,503
G
Pla2g3
phospholipase A2, group III
involved_in
ISO
(MGI:5492190|PMID:23624557)
RGD
PMID:23624557
MGI:5492190
NCBI chr14:78,367,625...78,373,913
Ensembl chr14:78,368,105...78,373,913
G
Stat5a
signal transducer and activator of transcription 5A
acts_upstream_of_or_within
ISO
MGI:1857249 (PMID:15947484)
RGD
PMID:15947484
NCBI chr10:85,785,537...85,809,869
Ensembl chr10:85,785,537...85,809,866
G
ENSRNOG00000063626
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
Ensembl chr 7:108,653,179...108,655,597
G
Faxdc2
fatty acid hydroxylase domain containing 2
involved_in
ISO
(PMID:27689744)
RGD
PMID:27689744
NCBI chr10:42,245,808...42,271,679
Ensembl chr10:42,246,868...42,271,871
G
Gata2
GATA binding protein 2
acts_upstream_of_or_within
ISO
(PMID:16254139)
RGD
PMID:16254139
NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
G
Hmgb2
high mobility group box 2
involved_in
ISO
(PMID:19965638)
RGD
PMID:19965638
NCBI chr16:32,710,651...32,713,230
Ensembl chr16:32,710,658...32,713,140
G
Kdm1a
lysine demethylase 1A
involved_in
ISO
(MGI:5284774|PMID:17707228)
RGD
PMID:17707228
MGI:5284774
NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319
G
Mturn
maturin, neural progenitor differentiation regulator homolog
involved_in
ISO IBA IEA ISS
(PMID:24681962) GO_REF:0000033 GO_REF:0000107 (MGI:6378013|PMID:24681962) GO_REF:0000024
RGD GO_Central Ensembl UniProt
PMID:24681962
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:6378013
NCBI chr 4:83,807,528...83,828,494
Ensembl chr 4:83,807,579...83,824,950
G
Pithd1
PITH domain containing 1
involved_in
ISO
(PMID:25134913) (MGI:6378063|PMID:25134913)
RGD
PMID:25134913
MGI:6378063
NCBI chr 5:148,205,995...148,216,490
Ensembl chr 5:148,205,998...148,217,080
G
Rab7b
Rab7b, member RAS oncogene family
involved_in
ISO
(PMID:20953574)
RGD
PMID:20953574
NCBI chr13:43,121,168...43,147,581
Ensembl chr13:43,121,226...43,147,581
G
Rcor1
REST corepressor 1
involved_in
ISO
(MGI:5284774|PMID:17707228)
RGD
PMID:17707228
MGI:5284774
NCBI chr 6:130,069,606...130,146,164
Ensembl chr 6:130,069,392...130,146,153
G
Scin
scinderin
involved_in
ISO
(PMID:11568009)
RGD
PMID:11568009
NCBI chr 6:57,109,500...57,188,123
Ensembl chr 6:57,109,403...57,188,242
G
Tesc
tescalcin
involved_in
ISO ISS
(PMID:17717601) GO_REF:0000024
RGD UniProt
PMID:17717601
GO_REF:0000024
NCBI chr12:38,521,832...38,555,665
Ensembl chr12:38,521,861...38,555,824
G
Thpo
thrombopoietin
involved_in
ISS ISO
GO_REF:0000024 (MGI:5314162|PMID:22128142)
UniProt RGD
PMID:22128142
GO_REF:0000024 MGI:5314162
Ensembl chr11:80,182,820...80,188,167
G
Znf16l-ps1
Zinc finger protein 16 like, pseudogene 1
involved_in
ISO
(PMID:16628192)
RGD
PMID:16628192
NCBI chr 7:108,650,889...108,670,242
G
Adamts20
ADAM metallopeptidase with thrombospondin type 1 motif, 20
acts_upstream_of_or_within
ISO
MGI:1916320|MGI:3766915 (PMID:18454205)
RGD
PMID:18454205
NCBI chr 7:125,396,227...125,528,020
Ensembl chr 7:125,397,734...125,527,777
G
Adamts9
ADAM metallopeptidase with thrombospondin type 1 motif, 9
acts_upstream_of_or_within
ISO
MGI:2660628 (PMID:18454205)
RGD
PMID:18454205
NCBI chr 4:125,290,633...125,462,988
Ensembl chr 4:125,291,490...125,462,929
G
Bcl2
BCL2, apoptosis regulator
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2158305 (PMID:16427619)
Ensembl RGD
PMID:16427619
GO_REF:0000107
NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743 Ensembl chr13:22,684,989...22,853,743
G
Kitlg
KIT ligand
acts_upstream_of_or_within
ISO
(PMID:16427619)
RGD
PMID:16427619
NCBI chr 7:34,896,075...34,977,215
Ensembl chr 7:34,896,053...34,977,214
G
Zeb2
zinc finger E-box binding homeobox 2
involved_in
ISO
(MGI:5574413|PMID:24769727)
RGD
PMID:24769727
MGI:5574413
NCBI chr 3:29,214,581...29,344,890
Ensembl chr 3:29,218,301...29,345,157
G
Cd46
CD46 molecule
involved_in
ISO
(PMID:12540904)
RGD
PMID:12540904
NCBI chr13:106,575,586...106,606,325
Ensembl chr13:106,574,858...106,660,445
G
Il23a
interleukin 23 subunit alpha
involved_in
ISO
(MGI:3027369|PMID:14688363)
RGD
PMID:14688363
MGI:3027369
NCBI chr 7:721,809...723,923
Ensembl chr 7:721,809...723,923
G
Pck1
phosphoenolpyruvate carboxykinase 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:6119963|PMID:29230018)
UniProt RGD
PMID:29230018
GO_REF:0000024 MGI:6119963
NCBI chr 3:161,930,256...161,936,205
Ensembl chr 3:161,930,256...161,936,191
G
RT1-Da
RT1 class II, locus Da
involved_in
ISO
(PMID:27591323)
RGD
PMID:27591323
NCBI chr20:4,513,464...4,518,457
Ensembl chr20:4,512,911...4,518,455
G
RT1-Db1
RT1 class II, locus Db1
involved_in
ISO
(PMID:27591323)
RGD
PMID:27591323
NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258
G
Tnfsf4
TNF superfamily member 4
involved_in
ISO
(MGI:3806904|PMID:18713990)
RGD
PMID:18713990
MGI:3806904
NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788
G
Ltbp3
latent transforming growth factor beta binding protein 3
involved_in
ISO
(PMID:18672106)
RGD
PMID:18672106
NCBI chr 1:203,029,412...203,045,975
Ensembl chr 1:203,029,877...203,045,975
G
Sox5
SRY-box transcription factor 5
involved_in
ISO
(PMID:21401405)
RGD
PMID:21401405
NCBI chr 4:176,781,375...177,736,833
Ensembl chr 4:176,785,892...177,736,852
G
Sox6
SRY-box transcription factor 6
involved_in
ISO IEA
(PMID:21401405) GO_REF:0000107
RGD Ensembl
PMID:21401405
GO_REF:0000107
NCBI chr 1:169,723,306...170,334,846
Ensembl chr 1:169,729,194...170,277,386
G
Sox9
SRY-box transcription factor 9
involved_in
ISO ISS
(PMID:21401405) GO_REF:0000024
RGD UniProt
PMID:21401405
GO_REF:0000024
NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994
G
Gdnf
glial cell derived neurotrophic factor
involved_in
IEA ISO
GO_REF:0000107 (MGI:81286|PMID:8657306)
Ensembl RGD
PMID:8657306
GO_REF:0000107 MGI:81286
NCBI chr 2:56,894,022...56,919,935
Ensembl chr 2:56,895,010...56,917,209
G
Lif
LIF, interleukin 6 family cytokine
involved_in
ISO
(PMID:20624457)
RGD
PMID:20624457
NCBI chr14:79,131,049...79,140,486
Ensembl chr14:79,134,574...79,140,482
G
Pax2
paired box 2
involved_in
ISS ISO
GO_REF:0000024 UniProtKB:Q00288 (MGI:2445273|PMID:12435636)
UniProt RGD
PMID:12435636
GO_REF:0000024 MGI:2445273
NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321
G
Pax8
paired box 8
involved_in
ISS ISO
GO_REF:0000024 (MGI:2445273|PMID:12435636)
UniProt RGD
PMID:12435636
GO_REF:0000024 MGI:2445273
NCBI chr 3:7,185,721...7,242,363
Ensembl chr 3:7,185,723...7,242,363
G
Gja1
gap junction protein, alpha 1
involved_in
ISO
(PMID:30599359)
RGD
PMID:30599359
NCBI chr20:35,756,007...35,768,481
Ensembl chr20:35,755,991...35,768,582
G
Mir150
microRNA 150
involved_in
ISO
(PMID:23765923)
RGD
PMID:23765923
NCBI chr 1:95,605,024...95,605,108
Ensembl chr 1:95,605,024...95,605,108
G
Mir200c
microRNA 200c
involved_in
ISO
(PMID:23765923)
RGD
PMID:23765923
NCBI chr 4:157,523,679...157,523,747
G
Wnt3a
Wnt family member 3A
involved_in
ISO
(PMID:20559569)
RGD
PMID:20559569
NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324
G
Pax2
paired box 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:3704067|PMID:17314325)
UniProt RGD
PMID:17314325
GO_REF:0000024 MGI:3704067
NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321
G
Pax8
paired box 8
involved_in
ISS ISO
GO_REF:0000024 (MGI:3704067|PMID:17314325)
UniProt RGD
PMID:17314325
GO_REF:0000024 MGI:3704067
NCBI chr 3:7,185,721...7,242,363
Ensembl chr 3:7,185,723...7,242,363
G
Adipoq
adiponectin, C1Q and collagen domain containing
involved_in
ISS ISO
GO_REF:0000024 (MGI:3795840|PMID:18431508)
UniProt RGD
PMID:18431508
GO_REF:0000024 MGI:3795840
NCBI chr11:77,721,912...77,735,644
Ensembl chr11:77,721,912...77,735,564
G
Tgfb1
transforming growth factor, beta 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:6192878|PMID:29909984)
UniProt RGD
PMID:29909984
GO_REF:0000024 MGI:6192878
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
G
Dkk1
dickkopf WNT signaling pathway inhibitor 1
involved_in
ISO
(MGI:4948425|PMID:21347250)
RGD
PMID:21347250
MGI:4948425
NCBI chr 1:228,381,521...228,385,202
Ensembl chr 1:228,381,521...228,385,202
G
Acin1
apoptotic chromatin condensation inducer 1
involved_in
ISO
(PMID:12393560)
RGD
PMID:12393560
NCBI chr15:28,102,112...28,147,001
Ensembl chr15:28,102,112...28,147,001
G
Cd4
Cd4 molecule
involved_in
ISO
(PMID:24942581)
RGD
PMID:24942581
NCBI chr 4:157,668,878...157,695,366
G
Cd74
CD74 molecule
involved_in
ISO IEA
(PMID:24942581) GO_REF:0000107
RGD Ensembl
PMID:24942581
GO_REF:0000107
NCBI chr18:54,256,757...54,266,003
Ensembl chr18:54,256,778...54,266,003
G
Csf1
colony stimulating factor 1
acts_upstream_of_or_within
ISO
MGI:1856333 (PMID:9215625)
RGD
PMID:9215625
NCBI chr 2:195,377,215...195,396,608
Ensembl chr 2:195,377,215...195,411,704
G
Ctnnbip1
catenin, beta-interacting protein 1
involved_in
ISO
(PMID:19569129)
RGD
PMID:19569129
NCBI chr 5:159,961,961...160,010,942
Ensembl chr 5:159,961,928...160,010,939
G
Dcstamp
dendrocyte expressed seven transmembrane protein
involved_in
ISO
(MGI:5319610|PMID:17713547)
RGD
PMID:17713547
MGI:5319610
NCBI chr 7:70,807,455...70,822,067
Ensembl chr 7:70,807,581...70,822,078
G
Fes
FES proto-oncogene, tyrosine kinase
involved_in
ISO
(PMID:28389358)
RGD
PMID:28389358
NCBI chr 1:134,337,698...134,346,934
Ensembl chr 1:134,337,698...134,346,934
G
Il34
interleukin 34
involved_in
ISO IBA IEA
(PMID:23409120) GO_REF:0000033 GO_REF:0000107
RGD GO_Central Ensembl
PMID:23409120
GO_REF:0000033 GO_REF:0000107
NCBI chr19:38,714,990...38,782,749
Ensembl chr19:38,714,991...38,764,000
G
Jun
Jun proto-oncogene, AP-1 transcription factor subunit
IDA
murine WEHI-3B D+ cells with or without retinoic acid
RGD
PMID:7947389
RGD:2291846
NCBI chr 5:109,894,175...109,897,268
Ensembl chr 5:109,893,145...109,897,656
G
RT1-Db1
RT1 class II, locus Db1
involved_in
ISO
(PMID:24942581)
RGD
PMID:24942581
NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258
G
Zfp36l1
zinc finger protein 36, C3H type-like 1
involved_in
ISO ISS
(PMID:26542173) GO_REF:0000024
RGD UniProt
PMID:26542173
GO_REF:0000024
NCBI chr 6:98,930,705...98,935,748
Ensembl chr 6:98,930,718...98,935,748
G
Camk1
calcium/calmodulin-dependent protein kinase I
involved_in
ISO IEA
(PMID:11081517) GO_REF:0000107
RGD Ensembl
PMID:11081517
GO_REF:0000107
NCBI chr 4:146,481,196...146,492,039
Ensembl chr 4:146,481,196...146,492,081
G
Eif5a
eukaryotic translation initiation factor 5A
IMP
RGD
PMID:19006180
RGD:2308859
NCBI chr10:54,640,104...54,644,845
Ensembl chr10:54,640,024...54,644,656
G
Maml1
mastermind-like transcriptional coactivator 1
involved_in
ISO
(MGI:3619288|PMID:16510869)
RGD
PMID:16510869
MGI:3619288
NCBI chr10:34,588,639...34,623,024
Ensembl chr10:34,588,646...34,623,338
G
Mdm2
MDM2 proto-oncogene
involved_in
ISO
(MGI:5643999|PMID:25720496)
RGD
PMID:25720496
MGI:5643999
NCBI chr 7:53,290,660...53,315,205
Ensembl chr 7:53,290,664...53,314,915
G
Myod1
myogenic differentiation 1
involved_in
ISO IEA ISS
(PMID:10672515) GO_REF:0000107 (MGI:5908341|PMID:16901893) GO_REF:0000024
RGD Ensembl UniProt
PMID:10672515 PMID:16901893
GO_REF:0000024 GO_REF:0000107 MGI:5908341
NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554
G
Rbm4
RNA binding motif protein 4
involved_in
ISO
(PMID:21518792)
RGD
PMID:21518792
NCBI chr 1:202,078,442...202,087,506
Ensembl chr 1:202,085,279...202,105,380
G
Setd3
SET domain containing 3, actin N3(tau)-histidine methyltransferase
acts_upstream_of_or_within
ISO
(PMID:21832073)
RGD
PMID:21832073
NCBI chr 6:127,023,058...127,090,020
Ensembl chr 6:127,023,058...127,090,008
G
Tarbp2
Tarbp2 subunit of RISC loading complex
acts_upstream_of_or_within
ISO
(PMID:27159388)
RGD
PMID:27159388
NCBI chr 7:133,649,118...133,654,306
Ensembl chr 7:133,649,090...133,654,314
G
Csf3
colony stimulating factor 3
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:1345151 (PMID:24216483)
GO_Central RGD
PMID:24216483
GO_REF:0000033
NCBI chr10:83,660,787...83,664,569
Ensembl chr10:83,661,207...83,663,603
G
Fes
FES proto-oncogene, tyrosine kinase
involved_in
ISO
(PMID:2656706)
RGD
PMID:2656706
NCBI chr 1:134,337,698...134,346,934
Ensembl chr 1:134,337,698...134,346,934
G
Hbb-b2
hemoglobin, beta adult minor chain
acts_upstream_of_or_within
ISO
(PMID:21281810)
RGD
PMID:21281810
NCBI chr 1:158,243,696...158,245,076
Ensembl chr 1:158,120,200...158,252,012
G
Hmgb1
high mobility group box 1
acts_upstream_of_or_within
ISO
(PMID:7635200), (PMID:7741753)
RGD
PMID:7635200 PMID:7741753
NCBI chr12:5,972,950...5,979,658
Ensembl chr12:5,901,586...5,978,565 Ensembl chr16:5,901,586...5,978,565
G
Hoxa5
homeo box A5
involved_in
ISO IEA
(PMID:10397719) GO_REF:0000107
RGD Ensembl
PMID:10397719
GO_REF:0000107
NCBI chr 4:81,302,341...81,306,234
Ensembl chr 4:81,302,353...81,306,234
G
Jag1
jagged canonical Notch ligand 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:15845452)
Ensembl RGD
PMID:15845452
GO_REF:0000107
NCBI chr 3:124,406,783...124,442,220
Ensembl chr 3:124,406,794...124,442,209
G
Lep
leptin
acts_upstream_of_or_within
ISO
(PMID:9057630)
RGD
PMID:9057630
NCBI chr 4:57,661,127...57,675,262
Ensembl chr 4:57,661,131...57,675,262
G
LOC103692127
homeobox protein Hox-A5
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
G
Cd101
CD101 molecule
acts_upstream_of_or_within
ISO
MGI:5288503 (PMID:21613616)
RGD
PMID:21613616
NCBI chr 2:188,422,989...188,459,536
Ensembl chr 2:188,422,351...188,459,502
G
Il3
interleukin 3
acts_upstream_of_or_within
ISO
MGI:96974 (PMID:1375116), (PMID:7690439)
RGD
PMID:1375116 PMID:7690439
NCBI chr10:38,405,716...38,408,066
Ensembl chr10:38,405,716...38,408,066
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Kitlg
KIT ligand
acts_upstream_of_or_within
ISO
MGI:96552 (PMID:1375116), (PMID:7690439)
RGD
PMID:1375116 PMID:7690439
NCBI chr 7:34,896,075...34,977,215
Ensembl chr 7:34,896,053...34,977,214
G
Hmgb1
high mobility group box 1
acts_upstream_of_or_within
ISO
(PMID:7635200), (PMID:7741753)
RGD
PMID:7635200 PMID:7741753
NCBI chr12:5,972,950...5,979,658
Ensembl chr12:5,901,586...5,978,565 Ensembl chr16:5,901,586...5,978,565
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Akirin1
akirin 1
involved_in
ISO IBA
(MGI:6201977|PMID:18255059), (MGI:6510200|PMID:30746755) GO_REF:0000033
RGD GO_Central
PMID:18255059 PMID:30746755
GO_REF:0000033 MGI:6201977 MGI:6510200
NCBI chr 5:135,989,378...136,004,782
Ensembl chr 5:135,989,465...136,004,762
G
Boc
BOC cell adhesion associated, oncogene regulated
involved_in
ISO
(MGI:2152959|PMID:11782431)
RGD
PMID:11782431
MGI:2152959
NCBI chr11:56,122,697...56,198,060
Ensembl chr11:56,122,750...56,198,059
G
Btg1
BTG anti-proliferation factor 1
acts_upstream_of_or_within
ISO
(PMID:11420681)
RGD
PMID:11420681
NCBI chr 7:31,341,391...31,343,649
Ensembl chr 7:31,341,027...31,343,649
G
Csrp3
cysteine and glycine rich protein 3
acts_upstream_of_or_within
ISO
(PMID:24860983)
RGD
PMID:24860983
NCBI chr 1:98,528,067...98,546,647
Ensembl chr 1:98,528,068...98,546,653
G
Cxcl9
C-X-C motif chemokine ligand 9
acts_upstream_of_or_within
ISO
(PMID:23844157)
RGD
PMID:23844157
NCBI chr14:15,722,868...15,727,779
Ensembl chr14:15,722,908...15,728,435
G
Flt3lg
Fms related receptor tyrosine kinase 3 ligand
acts_upstream_of_or_within
ISO
(PMID:23844157)
RGD
PMID:23844157
NCBI chr 1:95,615,056...95,620,463
Ensembl chr 1:95,609,370...95,620,463
G
Hif1an
hypoxia inducible factor 1 subunit alpha inhibitor
involved_in
ISO
(PMID:18299578)
RGD
PMID:18299578
NCBI chr 1:243,419,175...243,440,464
Ensembl chr 1:243,419,194...243,434,327
G
Hmgb1
high mobility group box 1
IMP
RGD
PMID:15143181
RGD:2316802
NCBI chr12:5,972,950...5,979,658
Ensembl chr12:5,901,586...5,978,565 Ensembl chr16:5,901,586...5,978,565
G
Igfbp3
insulin-like growth factor binding protein 3
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:12599210)
UniProt Ensembl RGD
PMID:12599210
GO_REF:0000024 GO_REF:0000107
NCBI chr14:82,056,347...82,064,083
Ensembl chr14:82,056,347...82,064,083
G
Ilk
integrin-linked kinase
IMP
L6 cells in vitro
RGD
PMID:14550274
RGD:2302089
NCBI chr 1:160,088,839...160,095,140
Ensembl chr 1:160,088,897...160,095,140
G
Kat5
lysine acetyltransferase 5
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:26291311)
UniProt Ensembl RGD
PMID:26291311
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:202,895,751...202,903,178
Ensembl chr 1:202,895,751...202,903,458
G
Lrrc8a
leucine rich repeat containing 8 VRAC subunit A
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr 3:13,509,577...13,537,174
Ensembl chr 3:13,510,513...13,536,202
G
Map3k5
mitogen-activated protein kinase kinase kinase 5
involved_in
ISO
(MGI:5320687|PMID:22337877)
RGD
PMID:22337877
MGI:5320687
NCBI chr 1:14,685,776...14,904,935
Ensembl chr 1:14,685,492...14,904,800
G
Mapk14
mitogen activated protein kinase 14
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:5526919|PMID:22847234) GO_REF:0000107
UniProt RGD Ensembl
PMID:22847234
GO_REF:0000024 GO_REF:0000107 MGI:5526919
NCBI chr20:6,749,646...6,810,590
Ensembl chr20:6,749,670...6,810,589
G
Mef2c
myocyte enhancer factor 2C
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:9770491)
UniProt Ensembl RGD
PMID:9770491
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
G
Mir199a2
microRNA 199a-2
involved_in
ISO
(PMID:23764775)
RGD
PMID:23764775
NCBI chr13:74,582,954...74,583,063
Ensembl chr13:74,582,954...74,583,063
G
Mustn1
musculoskeletal, embryonic nuclear protein 1
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr16:6,072,908...6,075,161
Ensembl chr16:6,072,833...6,075,161
G
Myf5
myogenic factor 5
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:42,802,946...42,806,177
Ensembl chr 7:42,802,946...42,806,177
G
Myf6
myogenic factor 6
involved_in
IBA IEA
GO_REF:0000033 GO_REF:0000118
GO_Central TreeGrafter
GO_REF:0000033 GO_REF:0000118
NCBI chr 7:42,813,008...42,814,852
Ensembl chr 7:42,812,792...42,814,852
G
Myod1
myogenic differentiation 1
involved_in
IBA IEA
GO_REF:0000033 GO_REF:0000118
GO_Central TreeGrafter
GO_REF:0000033 GO_REF:0000118
NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554
G
Myog
myogenin
involved_in
ISS IBA IEA ISO
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 (MGI:5526919|PMID:22847234)
UniProt GO_Central Ensembl RGD
PMID:22847234
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:5526919
NCBI chr13:45,745,455...45,748,044
Ensembl chr13:45,745,436...45,748,039
G
Neu2
neuraminidase 2
IDA
RGD
PMID:12860410
RGD:2316560
NCBI chr 9:88,218,494...88,267,356
Ensembl chr 9:88,249,135...88,267,355
G
Nr2c2
nuclear receptor subfamily 2, group C, member 2
involved_in
ISO
(MGI:5320687|PMID:22337877)
RGD
PMID:22337877
MGI:5320687
NCBI chr 4:124,610,216...124,666,813
Ensembl chr 4:124,608,960...124,661,902
G
Pik3r1
phosphoinositide-3-kinase regulatory subunit 1
IMP
RGD
PMID:9440811
RGD:1625263
NCBI chr 2:32,878,942...32,963,668
Ensembl chr 2:32,882,032...32,963,631
G
Plcb1
phospholipase C beta 1
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:4942243|PMID:15174099) GO_REF:0000107
BHF-UCL RGD Ensembl
PMID:15174099
GO_REF:0000024 GO_REF:0000107 MGI:4942243
NCBI chr 3:122,059,988...122,772,896
Ensembl chr 3:122,060,031...122,772,869
G
Ranbp3l
RAN binding protein 3-like
involved_in
ISO
(MGI:5883200|PMID:25755279)
RGD
PMID:25755279
MGI:5883200
NCBI chr 2:58,057,887...58,113,158
Ensembl chr 2:58,058,263...58,113,172
G
Ripor2
RHO family interacting cell polarization regulator 2
involved_in
ISO ISS
(PMID:17150207) GO_REF:0000024
RGD UniProt
PMID:17150207
GO_REF:0000024
NCBI chr17:40,323,748...40,547,482
Ensembl chr17:40,323,867...40,548,092
G
Smyd1
SET and MYND domain containing 1
involved_in
ISO
(PMID:19783823)
RGD
PMID:19783823
NCBI chr 4:103,195,330...103,252,989
Ensembl chr 4:103,200,322...103,311,766
G
Sox4
SRY-box transcription factor 4
involved_in
ISO
(PMID:26291311) (MGI:6838711|PMID:26291311)
RGD
PMID:26291311
MGI:6838711
NCBI chr17:35,667,809...35,672,515
Ensembl chr17:35,667,537...35,673,665
G
Tnfsf14
TNF superfamily member 14
acts_upstream_of_or_within
ISO
(PMID:23844157)
RGD
PMID:23844157
NCBI chr 9:2,068,295...2,073,128
Ensembl chr 9:2,069,104...2,073,216
G
Xkr8
XK related 8
involved_in
ISO
(PMID:28881496) (MGI:6852750|PMID:28881496)
RGD
PMID:28881496
MGI:6852750
NCBI chr 5:144,938,061...144,945,195
Ensembl chr 5:144,938,064...144,945,195
G
Zfhx3
zinc finger homeobox 3
involved_in
ISO
(PMID:11312261)
RGD
PMID:11312261
NCBI chr19:36,257,196...36,886,104
Ensembl chr19:36,630,254...36,881,771
G
Mir21
microRNA 21
involved_in
IMP ISO
(PMID:20533548)
RGD
PMID:20533548 PMID:27798620
RGD:41404703
NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348
G
Mir223
microRNA 223
IMP
RGD
PMID:29689569
RGD:25823140
NCBI chr X:61,141,887...61,141,996
Ensembl chr X:61,141,887...61,141,996
G
Mir433
microRNA 433
IDA
RGD
PMID:27698941
RGD:14700802
NCBI chr 6:128,545,119...128,545,211
Ensembl chr 6:128,545,112...128,545,217
G
Parp1
poly (ADP-ribose) polymerase 1
IMP
RGD
PMID:23260200
RGD:10413908
NCBI chr13:92,307,593...92,339,406
Ensembl chr13:92,307,586...92,339,404
G
Atp11a
ATPase phospholipid transporting 11A
involved_in
ISO
(PMID:29799007) (MGI:6161090|PMID:29799007)
RGD
PMID:29799007
MGI:6161090
NCBI chr16:76,657,752...76,767,640
Ensembl chr16:76,657,752...76,767,640
G
Cav3
caveolin 3
acts_upstream_of_or_within
ISO
MGI:2180558 (PMID:14517320)
RGD
PMID:14517320
NCBI chr 4:145,582,168...145,598,142
Ensembl chr 4:145,582,060...145,598,137
G
Csrp3
cysteine and glycine rich protein 3
acts_upstream_of_or_within
IGI IDA
PMID:9234731
MGI
PMID:9234731 PMID:9234731
RGD:10047266 , RGD:10047266
NCBI chr 1:98,528,067...98,546,647
Ensembl chr 1:98,528,068...98,546,653
G
Maml1
mastermind-like transcriptional coactivator 1
involved_in
ISO
UniProtKB:Q6T264 (PMID:16510869) UniProtKB:Q92585 (MGI:3619288|PMID:16510869)
RGD
PMID:16510869
MGI:3619288
NCBI chr10:34,588,639...34,623,024
Ensembl chr10:34,588,646...34,623,338
G
Mamstr
MEF2 activating motif and SAP domain containing transcriptional regulator
acts_upstream_of_or_within
ISO
MGI:97275 (PMID:16818234)
RGD
PMID:16818234
NCBI chr 1:96,109,715...96,116,295
Ensembl chr 1:96,110,343...96,115,744
G
Mapk14
mitogen activated protein kinase 14
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:5526919|PMID:22847234) GO_REF:0000024
Ensembl RGD UniProt
PMID:22847234
GO_REF:0000024 GO_REF:0000107 MGI:5526919
NCBI chr20:6,749,646...6,810,590
Ensembl chr20:6,749,670...6,810,589
G
Mmp14
matrix metallopeptidase 14
involved_in
ISS ISO
GO_REF:0000024 (MGI:5013661|PMID:21572390)
UniProt RGD
PMID:21572390
GO_REF:0000024 MGI:5013661
NCBI chr15:27,887,795...27,897,020
Ensembl chr15:27,887,727...27,899,864
G
Mtor
mechanistic target of rapamycin kinase
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2445183 (PMID:19704009)
Ensembl RGD
PMID:19704009
GO_REF:0000107
NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
G
Myog
myogenin
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:5526919|PMID:22847234)
UniProt Ensembl RGD
PMID:22847234
GO_REF:0000024 GO_REF:0000107 MGI:5526919
NCBI chr13:45,745,455...45,748,044
Ensembl chr13:45,745,436...45,748,039
G
Neu2
neuraminidase 2
IMP
RGD
PMID:8630046
RGD:2316563
NCBI chr 9:88,218,494...88,267,356
Ensembl chr 9:88,249,135...88,267,355
G
Piezo1
piezo-type mechanosensitive ion channel component 1
involved_in
ISO ISS IEA
(PMID:29799007) (MGI:6161090|PMID:29799007) GO_REF:0000024 GO_REF:0000107
RGD UniProt Ensembl
PMID:29799007
GO_REF:0000024 GO_REF:0000107 MGI:6161090
NCBI chr19:50,544,580...50,606,812
Ensembl chr19:50,544,582...50,606,501
G
Rbm24
RNA binding motif protein 24
involved_in
ISO IEA IBA
(PMID:26844700) GO_REF:0000118 GO_REF:0000033
RGD TreeGrafter GO_Central
PMID:26844700
GO_REF:0000033 GO_REF:0000118
NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102
G
Smyd1
SET and MYND domain containing 1
involved_in
ISO
(PMID:19783823)
RGD
PMID:19783823
NCBI chr 4:103,195,330...103,252,989
Ensembl chr 4:103,200,322...103,311,766
G
Axl
Axl receptor tyrosine kinase
involved_in
ISO
(PMID:18840707)
RGD
PMID:18840707
NCBI chr 1:81,265,088...81,296,278
Ensembl chr 1:81,265,088...81,296,265
G
Flt3lg
Fms related receptor tyrosine kinase 3 ligand
acts_upstream_of_or_within
ISO
MGI:2158499 (PMID:14607906)
RGD
PMID:14607906
NCBI chr 1:95,615,056...95,620,463
Ensembl chr 1:95,609,370...95,620,463
G
Gas6
growth arrest specific 6
involved_in
ISS ISO
GO_REF:0000024 (PMID:18840707)
UniProt RGD
PMID:18840707
GO_REF:0000024
NCBI chr16:76,045,430...76,075,904
Ensembl chr16:76,045,426...76,075,904
G
Il15
interleukin 15
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1931086|MGI:2136897 (PMID:14607906), (PMID:17318811)
Ensembl RGD
PMID:14607906 PMID:17318811
GO_REF:0000107
NCBI chr19:25,640,025...25,706,818
Ensembl chr19:25,640,251...25,706,820
G
Il15ra
interleukin 15 receptor subunit alpha
acts_upstream_of_or_within
ISO
MGI:1934016 (PMID:14607906)
RGD
PMID:14607906
NCBI chr17:66,802,300...66,831,973
Ensembl chr17:66,802,334...66,832,278
G
Il21
interleukin 21
acts_upstream_of_or_within
ISO
(PMID:14764669)
RGD
PMID:14764669
NCBI chr 2:120,117,105...120,127,012
Ensembl chr 2:120,119,444...120,126,996
G
Rasgrp1
RAS guanyl releasing protein 1
involved_in
ISO IEA
(MGI:5302428|PMID:21957144) GO_REF:0000107
RGD Ensembl
PMID:21957144
GO_REF:0000107 MGI:5302428
NCBI chr 3:104,168,549...104,230,107
Ensembl chr 3:104,170,013...104,230,056
G
Stat5a
signal transducer and activator of transcription 5A
acts_upstream_of_or_within
ISO
MGI:1857249 (PMID:9841920)
RGD
PMID:9841920
NCBI chr10:85,785,537...85,809,869
Ensembl chr10:85,785,537...85,809,866
G
Stat5b
signal transducer and activator of transcription 5B
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2181592 (PMID:9841920)
Ensembl RGD
PMID:9841920
GO_REF:0000107
NCBI chr10:85,704,841...85,775,856
Ensembl chr10:85,705,670...85,775,668
G
Tox
thymocyte selection-associated high mobility group box
acts_upstream_of_or_within
ISO
MGI:3773716 (PMID:20818394)
RGD
PMID:20818394
NCBI chr 5:19,874,994...20,171,272
Ensembl chr 5:19,874,467...20,171,272
G
Zbtb1
zinc finger and BTB domain containing 1
involved_in
ISO
(MGI:5446979|PMID:22753936)
RGD
PMID:22753936
MGI:5446979
NCBI chr 6:95,096,838...95,125,811
Ensembl chr 6:95,096,387...95,118,996
G
Cd24
CD24 molecule
involved_in
ISS ISO
GO_REF:0000024 (PMID:16885410)
UniProt RGD
PMID:16885410
GO_REF:0000024
NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662
G
Lhx1
LIM homeobox 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:3613206|PMID:16216236)
UniProt RGD
PMID:16216236
GO_REF:0000024 MGI:3613206
NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
G
Prom1
prominin 1
involved_in
ISO
(PMID:16885410)
RGD
PMID:16885410
NCBI chr14:66,989,545...67,094,534
Ensembl chr14:66,990,160...67,094,527
G
Acan
aggrecan
involved_in
IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr 1:132,981,582...133,044,416
Ensembl chr 1:132,981,582...133,043,627
G
Aspm
assembly factor for spindle microtubules
acts_upstream_of_or_within
ISO
MGI:88276 (PMID:21937711)
RGD
PMID:21937711
NCBI chr13:51,074,849...51,123,755
Ensembl chr13:51,074,849...51,123,755
G
Bcan
brevican
involved_in
IBA IEA
GO_REF:0000033 GO_REF:0000118
GO_Central TreeGrafter
GO_REF:0000033 GO_REF:0000118
NCBI chr 2:173,454,479...173,467,717
Ensembl chr 2:173,454,482...173,467,460
G
Bex1
brain expressed X-linked 1
acts_upstream_of_or_within
IDA
PMID:16498402
MGI
PMID:16498402
RGD:8554704
NCBI chr X:99,219,014...99,220,518
Ensembl chr X:99,219,014...99,220,958
G
Cdon
cell adhesion associated, oncogene regulated
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2653120 (PMID:16648472)
Ensembl RGD
PMID:16648472
GO_REF:0000107
NCBI chr 8:33,775,123...33,861,635
Ensembl chr 8:33,806,183...33,859,033
G
Cip2a
cellular inhibitor of PP2A
acts_upstream_of_or_within
ISO
(PMID:20447748)
RGD
PMID:20447748
NCBI chr11:51,792,143...51,823,016
Ensembl chr11:51,795,024...51,822,938
G
Ctf2
cardiotrophin 2
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr 1:182,334,061...182,342,406
Ensembl chr 1:182,333,238...182,342,623
G
Ctnnb1
catenin beta 1
involved_in acts_upstream_of_or_within
ISS ISO IEA
GO_REF:0000024 MGI:1334448 (PMID:21937711) GO_REF:0000107 (MGI:4941059|PMID:21325504)
UniProt RGD Ensembl
PMID:21325504 PMID:21937711
GO_REF:0000024 GO_REF:0000107 MGI:4941059
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
G
Cx3cl1
C-X3-C motif chemokine ligand 1
IDA
RGD
PMID:20018408
RGD:9491804
NCBI chr19:10,227,337...10,237,826
Ensembl chr19:10,227,340...10,236,833
G
Cx3cr1
C-X3-C motif chemokine receptor 1
IMP
RGD
PMID:20018408
RGD:9491804
NCBI chr 8:119,785,726...119,799,431
Ensembl chr 8:119,782,595...119,800,014
G
Dct
dopachrome tautomerase
acts_upstream_of_or_within
ISO
(PMID:16857183)
RGD
PMID:16857183
NCBI chr15:95,062,006...95,100,863
Ensembl chr15:95,062,003...95,100,836
G
Disc1
DISC1 scaffold protein
involved_in
ISO
(PMID:19303846) (MGI:3841497|PMID:19303846)
RGD
PMID:19303846
MGI:3841497
NCBI chr19:53,014,201...53,223,617
Ensembl chr19:53,014,616...53,219,778
G
Dmrta2
DMRT-like family A2
acts_upstream_of_or_within
ISO
MGI:5527461 (PMID:23056351)
RGD
PMID:23056351
NCBI chr 5:124,805,883...124,811,694
Ensembl chr 5:124,805,883...124,811,630
G
Drd2
dopamine receptor D2
acts_upstream_of_or_within
ISO
(PMID:17426594)
RGD
PMID:17426594
NCBI chr 8:49,708,927...49,772,876
Ensembl chr 8:49,708,927...49,772,875
G
Fgf2
fibroblast growth factor 2
acts_upstream_of_or_within
ISO
MGI:95290 (PMID:15051883)
RGD
PMID:15051883
NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
G
Foxg1
forkhead box G1
acts_upstream_of_or_within
ISO
MGI:1932522 (PMID:15893304)
RGD
PMID:15893304
NCBI chr 6:66,674,797...66,677,611
Ensembl chr 6:66,666,587...66,678,607
G
Fzd3
frizzled class receptor 3
involved_in
ISO
(MGI:4941059|PMID:21325504)
RGD
PMID:21325504
MGI:4941059
NCBI chr15:39,421,366...39,488,369
Ensembl chr15:39,421,355...39,488,369
G
Gli3
GLI family zinc finger 3
acts_upstream_of_or_within
ISO
MGI:1856282 (PMID:20943929)
RGD
PMID:20943929
NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
G
Hapln1
hyaluronan and proteoglycan link protein 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:20,631,640...20,696,388
Ensembl chr 2:20,631,640...20,693,777
G
Hapln2
hyaluronan and proteoglycan link protein 2
involved_in
IBA IEA
GO_REF:0000033 GO_REF:0000118
GO_Central TreeGrafter
GO_REF:0000033 GO_REF:0000118
NCBI chr 2:173,488,909...173,496,824
Ensembl chr 2:173,491,160...173,496,588
G
Hapln3
hyaluronan and proteoglycan link protein 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:133,046,465...133,064,665
Ensembl chr 1:133,046,467...133,080,177
G
Hapln4
hyaluronan and proteoglycan link protein 4
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr16:19,333,106...19,341,243
Ensembl chr16:19,333,106...19,341,243
G
Hif1a
hypoxia inducible factor 1 subunit alpha
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:103178 (PMID:17215402)
Ensembl RGD
PMID:17215402
GO_REF:0000107
NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
G
Id4
inhibitor of DNA binding 4
acts_upstream_of_or_within
ISO
MGI:3579084 (PMID:15882580)
RGD
PMID:15882580
NCBI chr17:16,389,387...16,391,956
Ensembl chr17:16,389,387...16,392,470
G
Itgb1
integrin subunit beta 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2156945 (PMID:15056720)
Ensembl RGD
PMID:15056720
GO_REF:0000107
NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
G
Kdm1a
lysine demethylase 1A
involved_in
ISO
(PMID:23400681)
RGD
PMID:23400681
NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319
G
Mapk8
mitogen-activated protein kinase 8
IMP
RGD
PMID:24388750
RGD:10047173
NCBI chr16:8,638,897...8,721,960
Ensembl chr16:8,638,924...8,721,981
G
Ncan
neurocan
involved_in
IBA IEA
GO_REF:0000033 GO_REF:0000118
GO_Central TreeGrafter
GO_REF:0000033 GO_REF:0000118
NCBI chr16:19,301,969...19,328,436
Ensembl chr16:19,301,969...19,328,436
G
Notch1
notch receptor 1
involved_in
IMP IBA
GO_REF:0000033
GO_Central RGD
PMID:19109527
GO_REF:0000033, RGD:2325303
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Notch2
notch receptor 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 2:185,610,594...185,744,088
Ensembl chr 2:185,610,589...185,744,088
G
Nr2e1
nuclear receptor subfamily 2, group E, member 1
acts_upstream_of_or_within
ISO
MGI:2176560 (PMID:16702404)
RGD
PMID:16702404
NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949
G
Otp
orthopedia homeobox
acts_upstream_of_or_within
ISO
MGI:2180541 (PMID:10557207)
RGD
PMID:10557207
NCBI chr 2:26,108,158...26,116,359
Ensembl chr 2:26,108,163...26,116,359
G
Pax6
paired box 6
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:18287938)
Ensembl RGD
PMID:18287938
GO_REF:0000107
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
G
Shh
sonic hedgehog signaling molecule
acts_upstream_of_or_within involved_in
IMP ISO IEA
MGI:1934268|MGI:3052661 (PMID:11748155), (PMID:16236765) GO_REF:0000107
RGD Ensembl
PMID:11748155 PMID:16236765 PMID:12469128
GO_REF:0000107, RGD:729868
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Smarcd3
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
involved_in
ISO
(PMID:18816825)
RGD
PMID:18816825
NCBI chr 4:10,548,693...10,580,334
Ensembl chr 4:10,548,751...10,580,326
G
Smo
smoothened, frizzled class receptor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:88274 (PMID:16543460)
Ensembl RGD
PMID:16543460
GO_REF:0000107
NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829
G
Sox10
SRY-box transcription factor 10
acts_upstream_of_or_within
ISO
(PMID:16857183)
RGD
PMID:16857183
NCBI chr 7:110,725,274...110,734,651
Ensembl chr 7:110,725,274...110,735,544
G
Sox2
SRY-box transcription factor 2
acts_upstream_of_or_within
ISO
MGI:2181440|MGI:3052123|MGI:3625176 (PMID:15240551), (PMID:16651659)
RGD
PMID:15240551 PMID:16651659
NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338
G
Vcan
versican
involved_in
IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr 2:20,761,718...20,860,637
Ensembl chr 2:20,761,718...20,860,637
G
Vegfa
vascular endothelial growth factor A
acts_upstream_of_or_within
ISO
MGI:106918 (PMID:17215402)
RGD
PMID:17215402
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
G
Vegfc
vascular endothelial growth factor C
acts_upstream_of_or_within
IDA
PMID:16462734
MGI
PMID:16462734
RGD:8554518
NCBI chr16:37,712,251...37,827,845
Ensembl chr16:37,712,262...37,827,848
G
Wdr62
WD repeat domain 62
IMP
RGD
PMID:24388750
RGD:10047173
NCBI chr 1:85,491,531...85,530,643
Ensembl chr 1:85,491,533...85,530,637
G
Zfp335
zinc finger protein 335
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:5468205|PMID:23178126) GO_REF:0000024
Ensembl RGD UniProt
PMID:23178126
GO_REF:0000024 GO_REF:0000107 MGI:5468205
NCBI chr 3:153,618,587...153,648,213
Ensembl chr 3:153,627,467...153,647,054
G
Fgf2
fibroblast growth factor 2
acts_upstream_of_or_within
ISO
(PMID:12417662)
RGD
PMID:12417662
NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
G
Ace
angiotensin I converting enzyme
IMP
RGD
PMID:20122169
RGD:2325223
NCBI chr10:90,910,316...90,930,437
Ensembl chr10:90,910,316...90,931,131
G
Ascl1
achaete-scute family bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:1857470 (PMID:16469766)
RGD
PMID:16469766
NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993
G
Bmp2
bone morphogenetic protein 2
acts_upstream_of_or_within
IDA
PMID:8616889
MGI
PMID:8616889
RGD:8553354
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
G
Cx3cr1
C-X3-C motif chemokine receptor 1
involved_in
ISO
(MGI:6189288|PMID:20018408)
RGD
PMID:20018408
MGI:6189288
NCBI chr 8:119,785,726...119,799,431
Ensembl chr 8:119,782,595...119,800,014
G
Cxcr4
C-X-C motif chemokine receptor 4
IMP
RGD
PMID:28104461
RGD:13463105
NCBI chr13:40,077,976...40,081,883
Ensembl chr13:40,077,976...40,081,883
G
Dll3
delta like canonical Notch ligand 3
IDA
RGD
PMID:16144902
RGD:1599776
NCBI chr 1:83,562,011...83,570,008
Ensembl chr 1:83,562,014...83,569,750
G
Drd2
dopamine receptor D2
IDA
RGD
PMID:27638511
RGD:13506952
NCBI chr 8:49,708,927...49,772,876
Ensembl chr 8:49,708,927...49,772,875
G
Ell3
elongation factor for RNA polymerase II 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:22768269)
Ensembl RGD
PMID:22768269
GO_REF:0000107
NCBI chr 3:108,413,035...108,417,181
Ensembl chr 3:108,410,448...108,417,132
G
Faim
Fas apoptotic inhibitory molecule
IMP
RGD
PMID:15520226
RGD:1357927
NCBI chr 8:99,543,877...99,569,499
Ensembl chr 8:99,542,405...99,560,562
G
Faiml
Fas apoptotic inhibitory molecule like
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
NCBI chr 8:99,791,849...99,810,206
Ensembl chr 8:99,791,981...99,810,228
G
Gh1
growth hormone 1
IDA
RGD
PMID:19524466
RGD:2315620
NCBI chr10:91,228,102...91,230,079
Ensembl chr10:91,228,103...91,230,078
G
Gper1
G protein-coupled estrogen receptor 1
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:5512928|PMID:23545157) GO_REF:0000107
UniProt RGD Ensembl
PMID:23545157
GO_REF:0000024 GO_REF:0000107 MGI:5512928
NCBI chr12:15,217,217...15,222,679
Ensembl chr12:15,217,442...15,221,889
G
Gprasp3
G protein-coupled receptor associated sorting protein family member 3
involved_in
ISO
(MGI:5545985|PMID:21199326)
RGD
PMID:21199326
MGI:5545985
NCBI chr X:98,847,591...98,854,949
Ensembl chr X:98,817,593...98,854,545
G
Hap1
huntingtin-associated protein 1
involved_in
IEA ISO
GO_REF:0000107 (MGI:5560429|PMID:24355921)
Ensembl RGD
PMID:24355921
GO_REF:0000107 MGI:5560429
NCBI chr10:85,277,890...85,286,126
Ensembl chr10:85,277,890...85,286,126
G
Ifng
interferon gamma
involved_in
ISO
UniProtKB:P05067|UniProtKB:P10636|UniProtKB:P49768 (PMID:19808651)
RGD
PMID:19808651
NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375
G
Jade2
jade family PHD finger 2
acts_upstream_of_or_within
ISO
(PMID:25018020)
RGD
PMID:25018020
NCBI chr10:36,075,239...36,124,210
Ensembl chr10:36,078,917...36,116,984
G
Kdr
kinase insert domain receptor
IEP
RGD
PMID:15258583
RGD:1581594
NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
G
Khdc3
KH domain containing 3, subcortical maternal complex member
involved_in
ISS ISO
GO_REF:0000024 (MGI:6716977|PMID:33115731)
UniProt RGD
PMID:33115731
GO_REF:0000024 MGI:6716977
NCBI chr 8:73,842,344...73,844,248
Ensembl chr 8:73,842,344...73,844,248
G
Lig4
DNA ligase 4
acts_upstream_of_or_within
ISO
MGI:1857720|MGI:1857732 (PMID:10716994), (PMID:16777961), (PMID:9875844)
RGD
PMID:9875844 PMID:10716994 PMID:16777961
NCBI chr16:79,518,393...79,526,956
Ensembl chr16:79,518,312...79,527,040
G
Lrp2
LDL receptor related protein 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:5908338|PMID:20460439)
UniProt RGD
PMID:20460439
GO_REF:0000024 MGI:5908338
NCBI chr 3:54,189,305...54,346,769
Ensembl chr 3:54,189,308...54,346,708
G
Man2a1
mannosidase, alpha, class 2A, member 1
acts_upstream_of_or_within
ISO
MGI:2159011|MGI:2673381 (PMID:20144606)
RGD
PMID:20144606
NCBI chr 9:104,252,001...104,408,349
Ensembl chr 9:104,252,001...104,408,349
G
Mir124-1
microRNA 124-1
acts_upstream_of_or_within
ISO
(PMID:17403776)
RGD
PMID:17403776
NCBI chr15:38,842,014...38,842,098
Ensembl chr15:38,842,014...38,842,098
G
Mir124-2
microRNA 124-2
acts_upstream_of_or_within
ISO
(PMID:17403776)
RGD
PMID:17403776
NCBI chr 2:100,134,866...100,134,974
Ensembl chr 2:100,134,866...100,134,974
G
Mir124-3
microRNA 124-3
acts_upstream_of_or_within
ISO
(PMID:17403776)
RGD
PMID:17403776
NCBI chr 3:168,014,952...168,015,038
Ensembl chr 3:168,014,952...168,015,038
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Mme
membrane metallo-endopeptidase
involved_in
ISO IEA
UniProtKB:P05067 (PMID:24825898) GO_REF:0000107
RGD Ensembl
PMID:24825898
GO_REF:0000107
NCBI chr 2:147,686,913...147,803,808
Ensembl chr 2:147,722,086...147,803,792
G
Mtor
mechanistic target of rapamycin kinase
IMP
RGD
PMID:19474323
RGD:10041000
NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
G
Nap1l1
nucleosome assembly protein 1-like 1
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:6189337|PMID:29490266) GO_REF:0000024
Ensembl RGD UniProt
PMID:29490266
GO_REF:0000024 GO_REF:0000107 MGI:6189337
NCBI chr 7:46,933,278...46,957,853
Ensembl chr 7:46,933,356...46,956,593
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Numb
NUMB, endocytic adaptor protein
involved_in
IEA IBA ISO
GO_REF:0000104 GO_REF:0000033 (MGI:2389562|PMID:12410312)
UniProt GO_Central RGD
PMID:12410312
GO_REF:0000033 GO_REF:0000104 MGI:2389562
NCBI chr 6:103,431,400...103,553,422
Ensembl chr 6:103,431,400...103,553,354
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Numbl
NUMB-like, endocytic adaptor protein
involved_in
ISS IBA ISO IEA
GO_REF:0000024 GO_REF:0000033 (MGI:2389562|PMID:12410312) GO_REF:0000104
UniProt GO_Central RGD
PMID:12410312
GO_REF:0000024 GO_REF:0000033 GO_REF:0000104 MGI:2389562
NCBI chr 1:82,549,814...82,573,788
Ensembl chr 1:82,550,054...82,573,776
G
Oprm1
opioid receptor, mu 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:5306306|PMID:16682964)
UniProt RGD
PMID:16682964
GO_REF:0000024 MGI:5306306
NCBI chr 1:43,160,057...43,413,409
Ensembl chr 1:43,160,057...43,413,409
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Rassf10
Ras association domain family member 10
involved_in
ISO
(MGI:6189337|PMID:29490266)
RGD
PMID:29490266
MGI:6189337
NCBI chr 1:167,058,277...167,063,591
Ensembl chr 1:167,058,099...167,063,572
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Rgs14
regulator of G-protein signaling 14
involved_in
IMP
PMID:19319189
UniProt
PMID:19319189
RGD:8554645
NCBI chr17:9,248,982...9,263,104
Ensembl chr17:9,249,019...9,263,104
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Serpinf1
serpin family F member 1
involved_in
ISO
(PMID:8226833)
RGD
PMID:8226833
NCBI chr10:60,250,198...60,262,593
Ensembl chr10:60,249,708...60,262,646
G
Snw1
SNW domain containing 1
involved_in
ISO
(MGI:5315685|PMID:19934264)
RGD
PMID:19934264
MGI:5315685
NCBI chr 6:107,095,450...107,119,536
Ensembl chr 6:107,095,457...107,119,536
G
Sox11
SRY-box transcription factor 11
involved_in
ISS ISO
GO_REF:0000024 (MGI:5285172|PMID:19490090)
UniProt RGD
PMID:19490090
GO_REF:0000024 MGI:5285172
NCBI chr 6:44,008,333...44,010,354
Ensembl chr 6:44,008,340...44,010,354
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Spen
spen family transcriptional repressor
involved_in
ISO
(PMID:16287852)
RGD
PMID:16287852
NCBI chr 5:153,775,287...153,848,677
Ensembl chr 5:153,776,234...153,848,811
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Srrt
serrate, RNA effector molecule
involved_in
ISO
(MGI:5306514|PMID:22198669)
RGD
PMID:22198669
MGI:5306514
NCBI chr12:19,392,578...19,406,098
Ensembl chr12:19,392,625...19,406,095
G
Star
steroidogenic acute regulatory protein
IMP
RGD
PMID:16579833
RGD:1600078
NCBI chr16:66,267,094...66,274,368
Ensembl chr16:66,264,807...66,271,672
G
Tgm2
transglutaminase 2
involved_in
ISO IEA
(PMID:30867594) GO_REF:0000107
RGD Ensembl
PMID:30867594
GO_REF:0000107
NCBI chr 3:146,772,684...146,801,924
Ensembl chr 3:146,772,687...146,801,981
G
Tle6
TLE family member 6, subcortical maternal complex member
acts_upstream_of_or_within
ISO
(PMID:16314515)
RGD
PMID:16314515
NCBI chr 7:8,107,050...8,118,639
Ensembl chr 7:8,107,207...8,118,639
G
Trim32
tripartite motif-containing 32
involved_in
ISO
(MGI:3836317|PMID:19269368)
RGD
PMID:19269368
MGI:3836317
NCBI chr 5:79,005,139...79,016,615
Ensembl chr 5:78,999,389...79,022,018
G
Wnt2
Wnt family member 2
involved_in
ISO
(MGI:4461115|PMID:20018874)
RGD
PMID:20018874
MGI:4461115
NCBI chr 4:46,328,408...46,374,673
Ensembl chr 4:46,333,998...46,374,402
G
Xrcc2
X-ray repair cross complementing 2
acts_upstream_of_or_within
ISO
MGI:3654106 (PMID:16777961)
RGD
PMID:16777961
NCBI chr 4:9,423,873...9,502,980
Ensembl chr 4:9,423,898...9,442,482
G
Xrcc4
X-ray repair cross complementing 4
acts_upstream_of_or_within
ISO
MGI:1926771 (PMID:9875844)
RGD
PMID:9875844
NCBI chr 2:20,948,464...21,197,705
Ensembl chr 2:20,951,200...21,197,808
G
Xrcc5
X-ray repair cross complementing 5
acts_upstream_of_or_within
ISO
MGI:2179987 (PMID:10716994)
RGD
PMID:10716994
NCBI chr 9:73,955,216...74,044,020
Ensembl chr 9:73,955,216...74,044,018
G
Xrcc6
X-ray repair cross complementing 6
acts_upstream_of_or_within
ISO
MGI:2179954 (PMID:10716994)
RGD
PMID:10716994
NCBI chr 7:113,542,992...113,563,762
Ensembl chr 7:113,543,057...113,563,762
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Zfp335
zinc finger protein 335
involved_in
ISO IEA IBA
(PMID:23178126) GO_REF:0000118 GO_REF:0000033
RGD TreeGrafter GO_Central
PMID:23178126
GO_REF:0000033 GO_REF:0000118
NCBI chr 3:153,618,587...153,648,213
Ensembl chr 3:153,627,467...153,647,054
G
Actr3
actin related protein 3
IMP
RGD
PMID:18256280
RGD:2306202
NCBI chr13:36,800,739...36,843,837
Ensembl chr13:36,800,093...36,844,124
G
Adra2b
adrenoceptor alpha 2B
involved_in
ISO
(PMID:17215105)
RGD
PMID:17215105
NCBI chr 3:114,585,174...114,589,220
Ensembl chr 3:114,585,169...114,589,355
G
Adra2c
adrenoceptor alpha 2C
involved_in
ISO
(PMID:17215105)
RGD
PMID:17215105
NCBI chr14:75,470,884...75,472,846
Ensembl chr14:75,471,143...75,472,846
G
App
amyloid beta precursor protein
involved_in
ISO
ComplexPortal:CPX-1134 (PMID:15190117)
RGD
PMID:15190117
NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
G
Arhgef2
Rho/Rac guanine nucleotide exchange factor 2
involved_in
ISO IBA IEA ISS
(PMID:28453519) GO_REF:0000033 GO_REF:0000118 GO_REF:0000107 (MGI:5907381|PMID:28453519) GO_REF:0000024
RGD GO_Central TreeGrafter Ensembl UniProt
PMID:28453519
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:5907381
NCBI chr 2:174,061,126...174,118,355
Ensembl chr 2:174,062,976...174,118,355
G
Ascl1
achaete-scute family bHLH transcription factor 1
involved_in
IDA
PMID:10648228
RGD UniProt
PMID:17936272 PMID:10648228
RGD:2314144 , RGD:13673741
NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993
G
Atoh1
atonal bHLH transcription factor 1
involved_in
ISO
(MGI:5009203|PMID:10648228)
RGD
PMID:10648228
MGI:5009203
NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154
G
Bcl6
BCL6, transcription repressor
acts_upstream_of_or_within
ISO
(PMID:23160044)
RGD
PMID:23160044
NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389
G
Bdnf
brain-derived neurotrophic factor
acts_upstream_of_or_within
ISO
(PMID:12798291)
RGD
PMID:12798291
NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
G
Bend6
BEN domain containing 6
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:23571214)
GO_Central RGD
PMID:23571214
GO_REF:0000033
NCBI chr 9:36,081,033...36,135,309
Ensembl chr 9:36,081,484...36,135,228
G
Bmp2
bone morphogenetic protein 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:9786991)
Ensembl RGD
PMID:9786991
GO_REF:0000107
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
G
Bmp4
bone morphogenetic protein 4
acts_upstream_of_or_within involved_in
IMP ISO IEA
(PMID:9786991) GO_REF:0000107
RGD Ensembl
PMID:9786991 PMID:19287192
GO_REF:0000107, RGD:9068400
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Bmp6
bone morphogenetic protein 6
acts_upstream_of_or_within
ISO
(PMID:9786991)
RGD
PMID:9786991
NCBI chr17:26,318,121...26,469,691
Ensembl chr17:26,318,569...26,470,365
G
Bmp7
bone morphogenetic protein 7
acts_upstream_of_or_within
ISO
(PMID:9786991)
RGD
PMID:9786991
NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
G
Bnip2
BCL2 interacting protein 2
acts_upstream_of_or_within
ISO
(PMID:19244314)
RGD
PMID:19244314
NCBI chr 8:70,640,436...70,661,782
Ensembl chr 8:70,640,445...70,675,590
G
Brinp1
BMP/retinoic acid inducible neural specific 1
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 5:82,348,501...82,550,506
Ensembl chr 5:82,348,930...82,493,150
G
Brinp2
BMP/retinoic acid inducible neural specific 2
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr13:70,431,006...70,532,766
Ensembl chr13:70,431,010...70,531,810
G
Brinp3
BMP/retinoic acid inducible neural specific 3
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr13:58,413,883...58,846,828
Ensembl chr13:58,413,883...58,846,770
G
Ccl5
C-C motif chemokine ligand 5
IMP
RGD
PMID:19559698
RGD:4889986
NCBI chr10:68,322,826...68,327,380
Ensembl chr10:68,322,829...68,327,377
G
Ccr5
C-C motif chemokine receptor 5
IMP
RGD
PMID:19559698
RGD:4889986
NCBI chr 8:123,752,423...123,757,538
Ensembl chr 8:123,752,325...123,759,260
G
Cdon
cell adhesion associated, oncogene regulated
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2653120 (PMID:16648472), (PMID:19244314)
Ensembl RGD
PMID:16648472 PMID:19244314
GO_REF:0000107
NCBI chr 8:33,775,123...33,861,635
Ensembl chr 8:33,806,183...33,859,033
G
Cpne1
copine 1
involved_in
ISO IEA
(PMID:23263657), (PMID:25450385) GO_REF:0000107
RGD Ensembl
PMID:23263657 PMID:25450385
GO_REF:0000107
NCBI chr 3:144,587,531...144,629,911
Ensembl chr 3:144,588,995...144,598,636
G
Cxcl12
C-X-C motif chemokine ligand 12
IMP
RGD
PMID:17425785
RGD:2306580
NCBI chr 4:150,388,326...150,401,173
Ensembl chr 4:150,388,325...150,401,168
G
Cyb5d2
cytochrome b5 domain containing 2
acts_upstream_of_or_within
ISO
(PMID:19968755)
RGD
PMID:19968755
NCBI chr10:57,394,268...57,413,336
Ensembl chr10:57,396,765...57,413,715
G
Dab1
DAB adaptor protein 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857750 (PMID:18848628)
Ensembl RGD
PMID:18848628
GO_REF:0000107
NCBI chr 5:118,392,953...119,513,625
Ensembl chr 5:119,140,533...119,510,552
G
Dmd
dystrophin
involved_in
ISO IMP
(PMID:15149856)
RGD
PMID:15149856 PMID:15149856
RGD:8554509
NCBI chr X:47,272,324...49,504,219
Ensembl chr X:47,272,331...49,504,207
G
Dnmt3b
DNA methyltransferase 3 beta
IMP
RGD
PMID:15632075
RGD:1601090
NCBI chr 3:142,130,588...142,169,128
Ensembl chr 3:142,130,592...142,169,124
G
Duoxa1
dual oxidase maturation factor 1
acts_upstream_of_or_within
ISO
(PMID:20233719)
RGD
PMID:20233719
NCBI chr 3:109,249,815...109,260,511
Ensembl chr 3:109,249,923...109,260,499
G
Ect2
epithelial cell transforming 2
involved_in
ISO
(MGI:5294522|PMID:21350944)
RGD
PMID:21350944
MGI:5294522
NCBI chr 2:109,975,813...110,037,911
Ensembl chr 2:109,975,813...110,037,911
G
Eif4g1
eukaryotic translation initiation factor 4 gamma 1
acts_upstream_of_or_within
ISO
(PMID:25456498)
RGD
PMID:25456498
NCBI chr11:80,221,919...80,241,958
Ensembl chr11:80,221,919...80,241,941
G
Epo
erythropoietin
IDA
RGD
PMID:12876482
RGD:2313656
NCBI chr12:19,204,258...19,207,948
Ensembl chr12:19,204,508...19,207,946
G
Etv5
ETS variant transcription factor 5
IMP
RGD
PMID:12297104
RGD:2316288
NCBI chr11:78,608,618...78,666,221
Ensembl chr11:78,608,710...78,666,215
G
Fezf1
Fez family zinc finger 1
acts_upstream_of_or_within
ISO
MGI:1859823 (PMID:20431123)
RGD
PMID:20431123
NCBI chr 4:51,762,751...51,766,078
Ensembl chr 4:51,762,751...51,766,078
G
Fezf2
Fez family zinc finger 2
acts_upstream_of_or_within
ISO
MGI:104876|MGI:1920441 (PMID:20431123)
RGD
PMID:20431123
NCBI chr15:12,768,614...12,777,554
Ensembl chr15:12,773,762...12,777,554
G
Fgfr1
Fibroblast growth factor receptor 1
involved_in
ISO ISS
(PMID:8622701) GO_REF:0000024
RGD UniProt
PMID:8622701
GO_REF:0000024
NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350
G
Foxa2
forkhead box A2
acts_upstream_of_or_within
ISO
MGI:1347476 (PMID:17922007)
RGD
PMID:17922007
NCBI chr 3:135,470,123...135,474,326
Ensembl chr 3:135,470,131...135,474,326
G
Foxg1
forkhead box G1
acts_upstream_of_or_within
ISO
MGI:2149593 (PMID:16314515)
RGD
PMID:16314515
NCBI chr 6:66,674,797...66,677,611
Ensembl chr 6:66,666,587...66,678,607
G
Gata2
GATA binding protein 2
IMP
RGD
PMID:21430145
RGD:9587810
NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
G
Gdf5
growth differentiation factor 5
IDA
RGD
PMID:15906156
RGD:1598708
NCBI chr 3:144,454,316...144,458,508
Ensembl chr 3:144,454,338...144,458,612
G
Gdf6
growth differentiation factor 6
acts_upstream_of_or_within
ISO
(PMID:9786991)
RGD
PMID:9786991
NCBI chr 5:22,996,246...23,012,567
Ensembl chr 5:22,996,246...23,012,567
G
Gdf7
growth differentiation factor 7
acts_upstream_of_or_within
ISO
(PMID:9786991)
RGD
PMID:9786991
NCBI chr 6:31,171,495...31,182,484
Ensembl chr 6:31,178,119...31,182,447
G
Gdpd5
glycerophosphodiester phosphodiesterase domain containing 5
involved_in acts_upstream_of_or_within
ISO IBA
(MGI:5299268|PMID:21943603) MGI:5302017 (PMID:23329048) GO_REF:0000033
RGD GO_Central
PMID:21943603 PMID:23329048
GO_REF:0000033 MGI:5299268
NCBI chr 1:153,679,718...153,761,452
Ensembl chr 1:153,679,718...153,761,446
G
Gli2
GLI family zinc finger 2
acts_upstream_of_or_within
ISO
MGI:97490 (PMID:16950124)
RGD
PMID:16950124
NCBI chr13:29,946,882...30,163,589
Ensembl chr13:29,946,809...30,163,574
G
Gprc5b
G protein-coupled receptor, class C, group 5, member B
involved_in
ISO
(MGI:5543849|PMID:24089469)
RGD
PMID:24089469
MGI:5543849
NCBI chr 1:173,316,904...173,340,933
Ensembl chr 1:173,316,907...173,340,932
G
Heyl
hes-related family bHLH transcription factor with YRPW motif-like
involved_in
ISO
(MGI:4365702|PMID:19631204), (MGI:5285519|PMID:21259317)
RGD
PMID:19631204 PMID:21259317
MGI:4365702 MGI:5285519
NCBI chr 5:135,508,160...135,525,152
Ensembl chr 5:135,508,160...135,525,152
G
Hmg20b
high mobility group 20 B
acts_upstream_of_or_within
ISO
MGI:1914117 (PMID:22570500)
RGD
PMID:22570500
NCBI chr 7:8,368,934...8,373,650
Ensembl chr 7:8,368,990...8,373,640
G
Hoxd3
homeo box D3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:96174 (PMID:18164701)
Ensembl RGD
PMID:18164701
GO_REF:0000107
NCBI chr 3:59,638,708...59,650,282
Ensembl chr 3:59,638,708...59,650,282
G
Hspa1a
heat shock protein family A (Hsp70) member 1A
IMP
RGD
PMID:23000394
RGD:7257594
NCBI chr20:3,870,765...3,873,221
Ensembl chr20:3,856,006...3,873,227
G
Ifng
interferon gamma
IDA
RGD
PMID:19355840
RGD:2311496
NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375
G
Il6
interleukin 6
IMP
RGD
PMID:7538937
RGD:2306944
NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
G
Impact
impact RWD domain protein
involved_in
ISS ISO
GO_REF:0000024 (MGI:5494763|PMID:23447528)
UniProt RGD
PMID:23447528
GO_REF:0000024 MGI:5494763
NCBI chr18:4,108,872...4,147,571
Ensembl chr18:4,108,853...4,147,569
G
Irx3
iroquois homeobox 3
acts_upstream_of_or_within
ISO
(PMID:10830170)
RGD
PMID:10830170
NCBI chr19:15,211,882...15,215,317
Ensembl chr19:15,211,878...15,215,317
G
Itgb1
integrin subunit beta 1
IMP
RGD
PMID:18658130
RGD:2325684
NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
G
Kctd11
potassium channel tetramerization domain containing 11
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:16148242)
GO_Central RGD
PMID:16148242
GO_REF:0000033
NCBI chr10:54,602,575...54,604,738
Ensembl chr10:54,599,754...54,604,760
G
Kdm4a
lysine demethylase 4A
IMP
RGD
PMID:24747049
RGD:9587433
NCBI chr 5:131,672,754...131,719,534
Ensembl chr 5:131,672,754...131,719,501
G
Kdm4c
lysine demethylase 4C
IMP
RGD
PMID:24747049
RGD:9587433
NCBI chr 5:88,100,710...88,306,821
Ensembl chr 5:88,100,733...88,306,818
G
Lin28a
lin-28 homolog A
acts_upstream_of_or_within
ISO
(PMID:20179095)
RGD
PMID:20179095
NCBI chr 5:146,227,119...146,244,122
Ensembl chr 5:146,227,119...146,244,122
G
Map1b
microtubule-associated protein 1B
IMP
RGD
PMID:8450955
RGD:2304228
NCBI chr 2:30,817,261...30,910,458
Ensembl chr 2:30,817,261...30,910,317
G
Mapk8ip3
mitogen-activated protein kinase 8 interacting protein 3
IMP
RGD
PMID:17188238
RGD:2302281
NCBI chr10:13,918,417...13,958,335
Ensembl chr10:13,918,400...13,958,273
G
Mef2c
myocyte enhancer factor 2C
involved_in
ISS ISO
GO_REF:0000024 (MGI:5284763|PMID:18579729)
UniProt RGD
PMID:18579729
GO_REF:0000024 MGI:5284763
NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
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Mir137
microRNA 137
involved_in
ISO
(PMID:23400681)
RGD
PMID:23400681
NCBI chr 2:206,480,881...206,480,982
Ensembl chr 2:206,480,884...206,480,985
G
Mmd
monocyte to macrophage differentiation-associated
involved_in
ISO IEA
(PMID:21968647) GO_REF:0000107
RGD Ensembl
PMID:21968647
GO_REF:0000107
NCBI chr10:75,073,278...75,101,528
Ensembl chr10:75,073,365...75,101,528
G
Mmd2
monocyte to macrophage differentiation-associated 2
involved_in
ISO
(PMID:21968647)
RGD
PMID:21968647
NCBI chr12:11,962,733...12,009,776
Ensembl chr12:11,962,757...12,009,773
G
Nap1l2
nucleosome assembly protein 1-like 2
acts_upstream_of_or_within
ISO
(PMID:17591696)
RGD
PMID:17591696
NCBI chr X:68,174,051...68,176,449
Ensembl chr X:68,173,987...68,176,666
G
Nbl1
NBL1, DAN family BMP antagonist
acts_upstream_of_or_within
ISO
(PMID:16325379)
RGD
PMID:16325379
NCBI chr 5:151,318,752...151,329,948
Ensembl chr 5:151,318,754...151,338,719
G
Ncoa1
nuclear receptor coactivator 1
involved_in
ISO
(MGI:5297786|PMID:16723356)
RGD
PMID:16723356
MGI:5297786
NCBI chr 6:27,232,609...27,507,992
Ensembl chr 6:27,232,611...27,475,664
G
Neurod1
neuronal differentiation 1
involved_in
IDA ISO
(MGI:5009389|PMID:18007592)
RGD
PMID:18007592 PMID:10101232
MGI:5009389 , RGD:727267
NCBI chr 3:64,359,554...64,363,526
Ensembl chr 3:64,359,395...64,363,649
G
Neurod2
neuronal differentiation 2
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:3789797|PMID:18214987), (MGI:4830798|PMID:20346398), (MGI:5009203|PMID:10648228), (MGI:5009405|PMID:16730830)
UniProt Ensembl RGD
PMID:10648228 PMID:16730830 PMID:18214987 PMID:20346398
GO_REF:0000024 GO_REF:0000107 MGI:3789797 MGI:4830798 MGI:5009203 MGI:5009405
NCBI chr10:83,323,801...83,327,986
Ensembl chr10:83,324,442...83,327,986
G
Neurog1
neurogenin 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:5009203|PMID:10648228), (MGI:5009389|PMID:18007592)
UniProt RGD
PMID:10648228 PMID:18007592
GO_REF:0000024 MGI:5009203 MGI:5009389
NCBI chr17:8,362,878...8,364,397
Ensembl chr17:8,362,821...8,364,571
G
Neurog2
neurogenin 2
acts_upstream_of_or_within
ISO
(PMID:18579678)
RGD
PMID:18579678
NCBI chr 2:216,092,709...216,095,276
Ensembl chr 2:216,093,363...216,094,154
G
Neurog3
neurogenin 3
IMP
RGD
PMID:9238023
RGD:1642078
NCBI chr20:30,079,780...30,081,262
Ensembl chr20:30,079,780...30,081,262
G
Ngf
nerve growth factor
IDA
RGD
PMID:18846328
RGD:2303808
NCBI chr 2:189,901,058...189,954,452
Ensembl chr 2:189,901,058...189,954,452
G
Ngfr
nerve growth factor receptor
IDA
RGD
PMID:23940017
RGD:10414074
NCBI chr10:80,515,287...80,533,518
Ensembl chr10:80,515,299...80,533,518
G
Nkx2-2
NK2 homeobox 2
acts_upstream_of_or_within
ISO
MGI:1932100 (PMID:10217145), (PMID:10830170)
RGD
PMID:10217145 PMID:10830170
NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411
G
Nkx2-5
NK2 homeobox 5
involved_in
ISO IEA
(PMID:15653675) GO_REF:0000107
RGD Ensembl
PMID:15653675
GO_REF:0000107
NCBI chr10:16,340,428...16,347,004
Ensembl chr10:16,344,159...16,346,934
G
Nkx6-1
NK6 homeobox 1
acts_upstream_of_or_within
ISO
(PMID:10830170)
RGD
PMID:10830170
NCBI chr14:7,969,756...7,976,689
Ensembl chr14:7,969,756...7,976,681
G
Pcp4
Purkinje cell protein 4
involved_in
ISS ISO
GO_REF:0000024 (PMID:21491429)
UniProt RGD
PMID:21491429
GO_REF:0000024
NCBI chr11:35,759,711...35,861,725
Ensembl chr11:35,800,713...35,861,725
G
Phox2b
paired-like homeobox 2b
acts_upstream_of_or_within
ISO
MGI:1100882 (PMID:17922007)
RGD
PMID:17922007
NCBI chr14:41,066,012...41,069,202
Ensembl chr14:41,066,264...41,068,978
G
Prpf19
pre-mRNA processing factor 19
acts_upstream_of_or_within
IDA
PMID:16352598
MGI
PMID:16352598
RGD:10047232
NCBI chr 1:207,541,582...207,552,664
Ensembl chr 1:207,541,595...207,552,662
G
Pten
phosphatase and tensin homolog
IMP
RGD
PMID:10662831
RGD:12801496
NCBI chr 1:230,630,443...230,697,070
Ensembl chr 1:230,630,338...230,696,838
G
Rara
retinoic acid receptor, alpha
IDA
RGD
PMID:19100254
RGD:2314252
NCBI chr10:83,883,490...83,928,932
Ensembl chr10:83,893,384...83,928,142
G
Rbm12
RNA binding motif protein 12
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr 3:144,609,661...144,629,911
Ensembl chr 3:144,611,623...144,629,915 Ensembl chr 3:144,611,623...144,629,915
G
Rest
RE1-silencing transcription factor
involved_in
ISS ISO
GO_REF:0000024 (MGI:6201823|PMID:21884984)
UniProt RGD
PMID:21884984
GO_REF:0000024 MGI:6201823
NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354
G
Rgs6
regulator of G-protein signaling 6
IDA
RGD
PMID:12140291
RGD:737642
NCBI chr 6:102,264,451...102,796,311
Ensembl chr 6:102,264,447...102,824,753
G
Rhoa
ras homolog family member A
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:17488780) GO_REF:0000107
RGD Ensembl
PMID:17488780
GO_REF:0000107
NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
G
Rnf112
ring finger protein 112
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:21566658)
Ensembl RGD
PMID:21566658
GO_REF:0000107
NCBI chr10:46,121,146...46,126,691
Ensembl chr10:46,121,148...46,126,699
G
S100b
S100 calcium binding protein B
involved_in
ISO
(MGI:66943|PMID:8202493), (MGI:7434528|PMID:2592414)
RGD
PMID:2592414 PMID:8202493
MGI:66943 MGI:7434528
NCBI chr20:12,372,866...12,381,619
Ensembl chr20:12,372,881...12,394,743
G
Sall1
spalt-like transcription factor 1
acts_upstream_of_or_within
ISO
MGI:2388379 (PMID:18024993)
RGD
PMID:18024993
NCBI chr19:18,005,782...18,022,705
Ensembl chr19:18,007,503...18,022,705
G
Sh3gl3
SH3 domain containing GRB2 like 3, endophilin A3
IMP
RGD
PMID:15066995
RGD:13504745
NCBI chr 1:136,124,500...136,255,669
Ensembl chr 1:136,124,499...136,255,584
G
Shh
sonic hedgehog signaling molecule
IMP
RGD
PMID:8124714
RGD:69996
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Shoc2
SHOC2 leucine-rich repeat scaffold protein
IMP
RGD
PMID:25514808
RGD:155804270
NCBI chr 1:252,958,939...253,048,820
Ensembl chr 1:252,959,723...253,047,337
G
Sin3a
SIN3 transcription regulator family member A
involved_in
ISO
(MGI:6152283|PMID:27399968)
RGD
PMID:27399968
MGI:6152283
NCBI chr 8:57,481,539...57,536,195
Ensembl chr 8:57,481,573...57,536,192
G
Socs2
suppressor of cytokine signaling 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:12368809)
Ensembl RGD
PMID:12368809
GO_REF:0000107
NCBI chr 7:30,006,360...30,045,161
Ensembl chr 7:30,008,578...30,043,548
G
Sox11
SRY-box transcription factor 11
involved_in
ISO ISS
(PMID:19808959) (MGI:5285167|PMID:19808959), (MGI:5285172|PMID:19490090) GO_REF:0000024
RGD UniProt
PMID:19490090 PMID:19808959
GO_REF:0000024 MGI:5285167 MGI:5285172
NCBI chr 6:44,008,333...44,010,354
Ensembl chr 6:44,008,340...44,010,354
G
Sox2
SRY-box transcription factor 2
acts_upstream_of_or_within
ISO
MGI:3625176 (PMID:16651659)
RGD
PMID:16651659
NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338
G
Spag9
sperm associated antigen 9
acts_upstream_of_or_within
ISO
(PMID:19244314)
RGD
PMID:19244314
NCBI chr10:78,943,439...79,077,797
Ensembl chr10:78,943,479...79,077,797
G
Tcf12
transcription factor 12
involved_in
ISS ISO
GO_REF:0000024 (MGI:3789797|PMID:18214987)
UniProt RGD
PMID:18214987
GO_REF:0000024 MGI:3789797
NCBI chr 8:72,490,447...72,799,265
Ensembl chr 8:72,492,567...72,799,201
G
Tcf3
transcription factor 3
involved_in
ISS ISO
GO_REF:0000024 (MGI:3789797|PMID:18214987)
UniProt RGD
PMID:18214987
GO_REF:0000024 MGI:3789797
NCBI chr 7:9,280,571...9,302,315
Ensembl chr 7:9,280,571...9,302,314
G
Tcf4
transcription factor 4
involved_in
ISS ISO
GO_REF:0000024 (MGI:3789797|PMID:18214987)
UniProt RGD
PMID:18214987
GO_REF:0000024 MGI:3789797
NCBI chr18:62,941,739...63,288,126
Ensembl chr18:62,943,782...63,284,425
G
Timp2
TIMP metallopeptidase inhibitor 2
IDA
RGD
PMID:15901773
RGD:1598578
NCBI chr10:103,541,199...103,590,611
Ensembl chr10:103,531,505...103,590,611
G
Tle6
TLE family member 6, subcortical maternal complex member
acts_upstream_of_or_within
ISO
MGI:1347464 (PMID:16314515)
RGD
PMID:16314515
NCBI chr 7:8,107,050...8,118,639
Ensembl chr 7:8,107,207...8,118,639
G
Trim32
tripartite motif-containing 32
involved_in
ISO
(MGI:3836317|PMID:19269368)
RGD
PMID:19269368
MGI:3836317
NCBI chr 5:79,005,139...79,016,615
Ensembl chr 5:78,999,389...79,022,018
G
Trpc5
transient receptor potential cation channel, subfamily C, member 5
IMP
RGD
PMID:20479868
RGD:10044014
NCBI chr X:107,946,163...108,230,991
Ensembl chr X:107,939,131...108,230,991
G
Trpc6
transient receptor potential cation channel, subfamily C, member 6
IMP
RGD
PMID:20479868
RGD:10044014
NCBI chr 8:5,759,387...5,864,000
Ensembl chr 8:5,758,935...5,828,092
G
Upf3b
UPF3B, regulator of nonsense mediated mRNA decay
acts_upstream_of
ISO
(PMID:23821644)
RGD
PMID:23821644
NCBI chr X:116,335,308...116,353,332
Ensembl chr X:116,335,308...116,353,236
G
Vwc2
von Willebrand factor C domain containing 2
involved_in
ISO
(MGI:3715084|PMID:17400546)
RGD
PMID:17400546
MGI:3715084
NCBI chr14:85,683,670...85,825,068
Ensembl chr14:85,684,414...85,818,524
G
Vwc2l
von Willebrand factor C domain containing 2 like
acts_upstream_of_or_within
ISO
(PMID:19852960)
RGD
PMID:19852960
NCBI chr 9:72,252,793...72,448,543
Ensembl chr 9:72,253,387...72,444,839
G
Zc4h2
zinc finger C4H2-type containing
involved_in
ISO IBA
(PMID:26056227) GO_REF:0000033
RGD GO_Central
PMID:26056227
GO_REF:0000033
NCBI chr X:60,525,706...60,546,519
Ensembl chr X:60,525,712...60,546,488
G
Zeb1
zinc finger E-box binding homeobox 1
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:4830798|PMID:20346398) GO_REF:0000024
Ensembl RGD UniProt
PMID:20346398
GO_REF:0000024 GO_REF:0000107 MGI:4830798
NCBI chr17:51,948,948...52,116,018
Ensembl chr17:51,948,948...52,115,214
G
Ak1
adenylate kinase 1
IEP
RGD
PMID:9920788
RGD:632499
NCBI chr 3:15,912,431...15,923,045
Ensembl chr 3:15,912,485...15,923,041
G
Bcl2
BCL2, apoptosis regulator
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2156165 (PMID:9547242)
Ensembl RGD
PMID:9547242
GO_REF:0000107
NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743 Ensembl chr13:22,684,989...22,853,743
G
Grip2
glutamate receptor interacting protein 2
involved_in
IMP
PMID:20083202
UniProt
PMID:20083202
RGD:4107359
NCBI chr 4:124,271,456...124,356,538
Ensembl chr 4:124,271,456...124,321,268
G
Map3k13
mitogen-activated protein kinase kinase kinase 13
involved_in
ISO
(MGI:5810221|PMID:27511108)
RGD
PMID:27511108
MGI:5810221
NCBI chr11:79,094,087...79,235,181
Ensembl chr11:79,097,247...79,235,181
G
Mtor
mechanistic target of rapamycin kinase
IMP
RGD
PMID:24118019
RGD:10041036
NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
G
Ngf
nerve growth factor
acts_upstream_of_or_within
ISO
MGI:102539|MGI:1861437|MGI:1934030 (PMID:23015435)
RGD
PMID:23015435
NCBI chr 2:189,901,058...189,954,452
Ensembl chr 2:189,901,058...189,954,452
G
Opa1
OPA1, mitochondrial dynamin like GTPase
IMP
RGD
PMID:23543485
RGD:7800725
NCBI chr11:71,108,100...71,185,170
Ensembl chr11:71,109,873...71,185,109
G
Ret
ret proto-oncogene
IMP
RGD
PMID:18501516
RGD:2324932
NCBI chr 4:151,325,969...151,368,176
Ensembl chr 4:151,326,431...151,368,176
G
Evi2b
ecotropic viral integration site 2B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:64,472,693...64,474,311
Ensembl chr10:64,471,505...64,481,560
G
Ikzf1
IKAROS family zinc finger 1
acts_upstream_of_or_within
ISO
MGI:2667175 (PMID:12406904)
RGD
PMID:12406904
NCBI chr14:86,255,065...86,340,839
Ensembl chr14:86,255,065...86,342,416
G
Ap3b1
adaptor related protein complex 3 subunit beta 1
acts_upstream_of_or_within
ISO
MGI:1856989 (PMID:14557411)
RGD
PMID:14557411
NCBI chr 2:25,600,069...25,800,937
Ensembl chr 2:25,600,040...25,800,935
G
Ap3d1
adaptor related protein complex 3 subunit delta 1
acts_upstream_of_or_within
ISO
MGI:1856083 (PMID:14557411)
RGD
PMID:14557411
NCBI chr 7:8,970,249...9,005,651
Ensembl chr 7:8,970,291...9,005,643
G
Cd1d1
CD1d1 molecule
acts_upstream_of_or_within
ISO
MGI:2180711|MGI:2180713 (PMID:10201995), (PMID:9133426)
RGD
PMID:9133426 PMID:10201995
NCBI chr 2:172,423,582...172,427,089
Ensembl chr 2:172,423,582...172,427,089
G
Tgfbr2
transforming growth factor, beta receptor 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2183502|MGI:2386448 (PMID:16973387)
Ensembl RGD
PMID:16973387
GO_REF:0000107
NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228
G
Zbtb16
zinc finger and BTB domain containing 16
involved_in
ISO
(MGI:3807724|PMID:18660811)
RGD
PMID:18660811
MGI:3807724
NCBI chr 8:48,989,376...49,177,011
Ensembl chr 8:48,994,566...49,177,011
G
Bmp2
bone morphogenetic protein 2
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:7539469|PMID:29148101) GO_REF:0000107
UniProt RGD Ensembl
PMID:29148101
GO_REF:0000024 GO_REF:0000107 MGI:7539469
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
G
Bmp4
bone morphogenetic protein 4
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:7539469|PMID:29148101) GO_REF:0000107
UniProt RGD Ensembl
PMID:29148101
GO_REF:0000024 GO_REF:0000107 MGI:7539469
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Ctnnb1
catenin beta 1
involved_in
IEA ISO
GO_REF:0000107 (MGI:7539469|PMID:29148101)
Ensembl RGD
PMID:29148101
GO_REF:0000107 MGI:7539469
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
G
Ipo7
importin 7
involved_in
ISO
(MGI:7510301|PMID:35922041)
RGD
PMID:35922041
MGI:7510301
NCBI chr 1:164,062,702...164,102,938
Ensembl chr 1:164,062,702...164,102,938
G
Lef1
lymphoid enhancer binding factor 1
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:7539469|PMID:29148101) GO_REF:0000107
UniProt RGD Ensembl
PMID:29148101
GO_REF:0000024 GO_REF:0000107 MGI:7539469
NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794
G
Rptor
regulatory associated protein of MTOR, complex 1
involved_in
ISO
(MGI:6313943|PMID:30984011)
RGD
PMID:30984011
MGI:6313943
NCBI chr10:104,878,487...105,176,986
Ensembl chr10:104,878,487...105,176,983
G
Serpine1
serpin family E member 1
involved_in
ISO IEA
(PMID:27046084) GO_REF:0000107
RGD Ensembl
PMID:27046084
GO_REF:0000107
NCBI chr12:19,601,272...19,611,657
Ensembl chr12:19,601,272...19,611,657
G
Aspa
aspartoacylase
IMP
RGD
PMID:16634055
RGD:1599295
NCBI chr10:57,891,704...57,945,267
Ensembl chr10:57,892,104...57,945,272
G
Clcn2
chloride voltage-gated channel 2
IMP
RGD
PMID:29344669
RGD:213230158
NCBI chr11:80,197,741...80,211,657
Ensembl chr11:80,198,153...80,211,657
G
Cxcr4
C-X-C motif chemokine receptor 4
involved_in
ISO
(MGI:4458974|PMID:20534485)
RGD
PMID:20534485
MGI:4458974
NCBI chr13:40,077,976...40,081,883
Ensembl chr13:40,077,976...40,081,883
G
Dag1
dystroglycan 1
IMP
RGD
PMID:17395644
RGD:11541054
NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
G
Enpp2
ectonucleotide pyrophosphatase/phosphodiesterase 2
IDA
RGD
PMID:22139091
RGD:9685417
NCBI chr 7:86,202,345...86,325,050
Ensembl chr 7:86,202,350...86,324,827
G
Gsx2
GS homeobox 2
acts_upstream_of_or_within
ISO
(PMID:23042297)
RGD
PMID:23042297
NCBI chr14:33,123,799...33,126,151
Ensembl chr14:33,124,381...33,126,105
G
Hdac1
histone deacetylase 1
acts_upstream_of_or_within
IMP ISO
MGI:1097691 (PMID:19503085)
RGD
PMID:19503085 PMID:22573687
RGD:9590148
NCBI chr 5:141,853,992...141,881,057
Ensembl chr 5:141,853,989...141,881,111
G
Hdac2
histone deacetylase 2
acts_upstream_of_or_within
IMP ISO
MGI:108086 (PMID:19503085)
RGD
PMID:19503085 PMID:22573687
RGD:9590148
NCBI chr20:40,548,244...40,571,609
Ensembl chr20:40,548,250...40,571,609
G
Il33
interleukin 33
IMP
RGD
PMID:31165473
RGD:40400907
NCBI chr 1:227,701,964...227,736,374
Ensembl chr 1:227,721,435...227,736,373
G
Il34
interleukin 34
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:5805301|PMID:27445335) GO_REF:0000107
UniProt RGD Ensembl
PMID:27445335
GO_REF:0000024 GO_REF:0000107 MGI:5805301
NCBI chr19:38,714,990...38,782,749
Ensembl chr19:38,714,991...38,764,000
G
Mdk
midkine
involved_in
ISO IEA ISS
(PMID:27445335) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:27445335
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:77,901,134...77,903,997
Ensembl chr 3:77,901,158...77,903,130
G
Mir219a1
microRNA 219a-1
acts_upstream_of_or_within
ISO
(PMID:20223197)
RGD
PMID:20223197
NCBI chr20:4,829,687...4,829,796
Ensembl chr20:4,829,687...4,829,796
G
Mir23a
microRNA 23a
acts_upstream_of_or_within
ISO
(PMID:24101522)
RGD
PMID:24101522
NCBI chr19:23,954,997...23,955,071
Ensembl chr19:23,954,997...23,955,071
G
Mtor
mechanistic target of rapamycin kinase
acts_upstream_of_or_within involved_in
IMP ISO IEA
MGI:2179311|MGI:3850506 (PMID:25411504) GO_REF:0000107
RGD Ensembl
PMID:25411504 PMID:19439614
GO_REF:0000107, RGD:10040963
NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
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Myrf
myelin regulatory factor
IDA
RGD
PMID:27370227
RGD:213230157
NCBI chr 1:206,854,175...206,886,276
Ensembl chr 1:206,854,175...206,886,157
G
Nkx2-2
NK2 homeobox 2
acts_upstream_of_or_within
ISO
MGI:1355331 (PMID:11566099)
RGD
PMID:11566099
NCBI chr 3:134,619,701...134,630,282
Ensembl chr 3:134,620,039...134,622,411
G
Nkx6-1
NK6 homeobox 1
acts_upstream_of_or_within
ISO
MGI:1352738 (PMID:15629702)
RGD
PMID:15629702
NCBI chr14:7,969,756...7,976,689
Ensembl chr14:7,969,756...7,976,681
G
Nkx6-2
NK6 homeobox 2
acts_upstream_of_or_within
ISO
MGI:1206039 (PMID:15629702)
RGD
PMID:15629702
NCBI chr 1:194,380,149...194,383,533
Ensembl chr 1:194,381,975...194,383,515
G
Olig2
oligodendrocyte transcription factor 2
acts_upstream_of_or_within
ISO
MGI:97347 (PMID:11566099)
RGD
PMID:11566099
NCBI chr11:30,475,510...30,478,886
Ensembl chr11:30,475,398...30,480,152
G
Pparg
peroxisome proliferator-activated receptor gamma
IMP
RGD
PMID:18543250
RGD:2301878
NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
G
Prmt5
protein arginine methyltransferase 5
IMP
RGD
PMID:22041901
RGD:9491827
NCBI chr15:27,968,893...27,978,291
Ensembl chr15:27,968,910...27,978,296
G
Ptn
pleiotrophin
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:27445335), (PMID:30667096)
UniProt Ensembl RGD
PMID:27445335 PMID:30667096
GO_REF:0000024 GO_REF:0000107
NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456
G
Ptpra
protein tyrosine phosphatase, receptor type, A
IMP
RGD
PMID:19812040
RGD:2314625
NCBI chr 3:117,650,146...117,759,744
Ensembl chr 3:117,650,183...117,759,728
G
Ptprz1
protein tyrosine phosphatase, receptor type Z1
involved_in
IMP
PMID:30667096
UniProt
PMID:30667096
RGD:14397553
NCBI chr 4:51,397,316...51,595,220
Ensembl chr 4:51,397,601...51,595,218
G
Qki
QKI, KH domain containing RNA binding
involved_in
IMP ISO IEA
(MGI:4839851|PMID:20956316), (MGI:4950003|PMID:21253564), (MGI:5903342|PMID:28188285) GO_REF:0000107
RGD Ensembl
PMID:20956316 PMID:21253564 PMID:28188285 PMID:17575274
GO_REF:0000107 MGI:4839851 MGI:4950003 MGI:5903342 , RGD:10045992
NCBI chr 1:50,387,716...50,501,568
Ensembl chr 1:50,387,698...50,498,831
G
Rheb
Ras homolog, mTORC1 binding
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2179311|MGI:3850507 (PMID:25411504)
Ensembl RGD
PMID:25411504
GO_REF:0000107
NCBI chr 4:10,278,970...10,320,160
Ensembl chr 4:10,279,370...10,320,160
G
Shh
sonic hedgehog signaling molecule
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:11171336)
Ensembl RGD
PMID:11171336
GO_REF:0000107
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Tenm4
teneurin transmembrane protein 4
involved_in
ISO
(MGI:5437806|PMID:22915103)
RGD
PMID:22915103
MGI:5437806
NCBI chr 1:149,895,097...151,263,315
Ensembl chr 1:150,780,381...151,259,144
G
Tlr2
toll-like receptor 2
IDA
RGD
PMID:21971760
RGD:7241097
NCBI chr 2:169,200,620...169,206,819
Ensembl chr 2:169,197,419...169,206,630
G
Tnfrsf1b
TNF receptor superfamily member 1B
involved_in
ISO IBA IEA
(MGI:5775216|PMID:27147664) GO_REF:0000033 GO_REF:0000118
RGD GO_Central TreeGrafter
PMID:27147664
GO_REF:0000033 GO_REF:0000118 MGI:5775216
NCBI chr 5:157,070,642...157,104,216
Ensembl chr 5:157,070,642...157,104,206
G
Tp73
tumor protein p73
IMP
RGD
PMID:14960496
RGD:2291843
NCBI chr 5:164,621,377...164,703,958
Ensembl chr 5:164,621,377...164,681,128
G
Zfp365
zinc finger protein 365
involved_in
IMP IEA ISO
PMID:24481677 GO_REF:0000107 (MGI:5558972|PMID:24481677)
Ensembl RGD
PMID:24481677 PMID:24481677
GO_REF:0000107 MGI:5558972 , RGD:13210567
NCBI chr20:20,666,240...20,689,734
Ensembl chr20:20,666,240...20,691,238
G
Zfp488
zinc finger protein 488
involved_in acts_upstream_of_or_within
ISO
(MGI:6189284|PMID:22355521) MGI:1355331 (PMID:16908628)
RGD
PMID:16908628 PMID:22355521
MGI:6189284
NCBI chr16:9,283,039...9,293,681
Ensembl chr16:9,283,043...9,293,671
G
Gjc2
gap junction protein, gamma 2
IMP
RGD
PMID:28278052
RGD:13208599
NCBI chr10:43,962,642...43,971,358
Ensembl chr10:43,962,642...43,970,467
G
Lrp2
LDL receptor related protein 2
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:5319263|PMID:22354480)
UniProt Ensembl RGD
PMID:22354480
GO_REF:0000024 GO_REF:0000107 MGI:5319263
NCBI chr 3:54,189,305...54,346,769
Ensembl chr 3:54,189,308...54,346,708
G
Lyn
LYN proto-oncogene, Src family tyrosine kinase
IMP
RGD
PMID:15504915
RGD:2303714
NCBI chr 5:16,639,512...16,755,501
Ensembl chr 5:16,639,466...16,756,868
G
Nog
noggin
IMP
RGD
PMID:14975730
RGD:1358325
NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
G
Shh
sonic hedgehog signaling molecule
IDA
RGD
PMID:12237843
RGD:2306309
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Tf
transferrin
IDA
RGD
PMID:23368675
RGD:7244376
NCBI chr 8:103,789,780...103,816,487
Ensembl chr 8:103,767,995...103,816,511
G
Cyp51
cytochrome P450, family 51
IMP
RGD
PMID:11133687
RGD:41412164
NCBI chr 4:30,036,956...30,055,410
Ensembl chr 4:30,036,865...30,055,410
G
Pde3a
phosphodiesterase 3A
acts_upstream_of_or_within
ISO
MGI:2651499 (PMID:19474061)
RGD
PMID:19474061
NCBI chr 4:174,172,804...174,443,944
Ensembl chr 4:174,172,868...174,438,274
G
Pde5a
phosphodiesterase 5A
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1860764 (PMID:19474061)
Ensembl RGD
PMID:19474061
GO_REF:0000107
NCBI chr 2:210,858,515...211,003,480
Ensembl chr 2:210,858,063...210,999,701
G
Aurka
aurora kinase A
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:14695913)
Ensembl RGD
PMID:14695913
GO_REF:0000107
NCBI chr 3:161,128,309...161,144,524
Ensembl chr 3:161,128,313...161,144,390
G
Bnc1
basonuclin zinc finger protein 1
involved_in
ISO
(PMID:30010909)
RGD
PMID:30010909
NCBI chr 1:135,917,676...135,943,333
Ensembl chr 1:135,917,687...135,943,333
G
Gdf9
growth differentiation factor 9
involved_in
ISO
(PMID:24313324)
RGD
PMID:24313324
NCBI chr10:37,589,200...37,599,970
Ensembl chr10:37,595,679...37,599,672
G
Sirt2
sirtuin 2
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:5567889|PMID:24334550)
UniProt Ensembl RGD
PMID:24334550
GO_REF:0000024 GO_REF:0000107 MGI:5567889
NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975
G
Acvr1
activin A receptor type 1
involved_in
ISO IEA
(PMID:18436533) GO_REF:0000107
RGD Ensembl
PMID:18436533
GO_REF:0000107
NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241
G
Acvr2a
activin A receptor type 2A
involved_in
ISO IEA
(PMID:18436533) GO_REF:0000107
RGD Ensembl
PMID:18436533
GO_REF:0000107
NCBI chr 3:33,204,961...33,292,673
Ensembl chr 3:33,205,523...33,289,968
G
Acvr2b
activin A receptor type 2B
involved_in
ISO
(PMID:18436533)
RGD
PMID:18436533
NCBI chr 8:119,138,901...119,178,477
Ensembl chr 8:119,138,812...119,170,458
G
Atraid
all-trans retinoic acid-induced differentiation factor
involved_in
ISO
(PMID:21723284)
RGD
PMID:21723284
NCBI chr 6:25,315,236...25,319,821
G
Bmp2
bone morphogenetic protein 2
involved_in acts_upstream_of_or_within
ISO IEA
(MGI:5009350|PMID:20675382) (PMID:15175325), (PMID:16099986) GO_REF:0000107
RGD Ensembl
PMID:15175325 PMID:16099986 PMID:20675382
GO_REF:0000107 MGI:5009350
NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397
G
Bmp4
bone morphogenetic protein 4
acts_upstream_of_or_within involved_in
IMP ISO ISS IEA IDA
(PMID:14749725) (PMID:18436533) GO_REF:0000024 GO_REF:0000107
RGD UniProt Ensembl
PMID:14749725 PMID:18436533 PMID:17112416 PMID:16245174
GO_REF:0000024 GO_REF:0000107, RGD:1643600 , RGD:2289011
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Bmp6
bone morphogenetic protein 6
involved_in
IMP ISO
(PMID:18436533)
RGD
PMID:18436533 PMID:9202223
RGD:2289027
NCBI chr17:26,318,121...26,469,691
Ensembl chr17:26,318,569...26,470,365
G
Bmp7
bone morphogenetic protein 7
involved_in
ISO
(PMID:18436533)
RGD
PMID:18436533
NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
G
Bmpr1a
bone morphogenetic protein receptor type 1A
involved_in
ISO
(PMID:18436533)
RGD
PMID:18436533
NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
G
Bmpr1b
bone morphogenetic protein receptor type 1B
involved_in
ISO
(PMID:18436533)
RGD
PMID:18436533
NCBI chr 2:230,538,252...230,871,077
Ensembl chr 2:230,541,558...230,871,368
G
Bmpr2
bone morphogenetic protein receptor type 2
involved_in
ISO
(PMID:18436533)
RGD
PMID:18436533
NCBI chr 9:61,192,718...61,307,280
Ensembl chr 9:61,190,566...61,301,809
G
Ccn1
cellular communication network factor 1
involved_in
ISO IEA
(PMID:20675382) GO_REF:0000107
RGD Ensembl
PMID:20675382
GO_REF:0000107
NCBI chr 2:234,562,410...234,565,370
Ensembl chr 2:234,562,408...234,565,484
G
Ccn4
cellular communication network factor 4
involved_in
ISO IEA
(PMID:20684029) GO_REF:0000107
RGD Ensembl
PMID:20684029
GO_REF:0000107
NCBI chr 7:98,645,238...98,677,253
Ensembl chr 7:98,645,182...98,677,248
G
Cd276
Cd276 molecule
acts_upstream_of_or_within
ISO
MGI:3033707 (PMID:15317945)
RGD
PMID:15317945
NCBI chr 8:58,937,751...58,968,082
Ensembl chr 8:58,937,751...58,968,380
G
Cebpa
CCAAT/enhancer binding protein alpha
acts_upstream_of_or_within
ISO
(PMID:15175325)
RGD
PMID:15175325
NCBI chr 1:87,759,631...87,762,303
Ensembl chr 1:87,759,433...87,762,412
G
Cebpb
CCAAT/enhancer binding protein beta
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:15175325)
Ensembl RGD
PMID:15175325
GO_REF:0000107
NCBI chr 3:156,398,035...156,399,466
Ensembl chr 3:156,397,052...156,399,473
G
Cebpd
CCAAT/enhancer binding protein delta
acts_upstream_of_or_within
ISO
(PMID:15175325)
RGD
PMID:15175325
NCBI chr11:84,764,670...84,765,808
Ensembl chr11:84,764,565...84,765,829
G
Clic1
chloride intracellular channel 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:19703605)
Ensembl RGD
PMID:19703605
GO_REF:0000107
NCBI chr20:3,764,867...3,773,711
Ensembl chr20:3,761,461...3,773,712
G
Cthrc1
collagen triple helix repeat containing 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3830252 (PMID:18779865)
Ensembl RGD
PMID:18779865
GO_REF:0000107
NCBI chr 7:70,122,474...70,132,756
Ensembl chr 7:70,122,474...70,132,756
G
Ctnnb1
catenin beta 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2148591|MGI:2148594|MGI:2450929 (PMID:15866163)
Ensembl RGD
PMID:15866163
GO_REF:0000107
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
G
Ctnnbip1
catenin, beta-interacting protein 1
involved_in
ISO
(PMID:18977368)
RGD
PMID:18977368
NCBI chr 5:159,961,961...160,010,942
Ensembl chr 5:159,961,928...160,010,939
G
Ddr2
discoidin domain receptor tyrosine kinase 2
involved_in
ISO
(PMID:20564243)
RGD
PMID:20564243
NCBI chr13:82,193,623...82,318,229
Ensembl chr13:82,195,463...82,317,363
G
Dlx5
distal-less homeobox 5
IMP
RGD
PMID:12815054
RGD:1298882
NCBI chr 4:34,999,139...35,003,504
Ensembl chr 4:34,999,139...35,003,407
G
Dnai3
dynein axonemal intermediate chain 3
involved_in
ISO
(MGI:6450489|PMID:25498833)
RGD
PMID:25498833
MGI:6450489
NCBI chr 2:234,947,910...235,006,173
Ensembl chr 2:234,929,677...235,006,173
G
Fam20c
FAM20C, golgi associated secretory pathway kinase
acts_upstream_of_or_within
ISO
(PMID:22615579)
RGD
PMID:22615579
NCBI chr12:15,826,864...15,885,423
Ensembl chr12:15,826,871...15,884,543
G
Fbn2
fibrillin 2
involved_in
ISO
(MGI:4836762|PMID:20855508)
RGD
PMID:20855508
MGI:4836762
NCBI chr18:51,499,670...51,703,976
Ensembl chr18:51,499,737...51,703,976
G
Fbxo5
F-box protein 5
involved_in
ISO
(PMID:29850565)
RGD
PMID:29850565
NCBI chr 1:42,196,068...42,202,437
Ensembl chr 1:42,196,068...42,202,437
G
Fermt2
FERM domain containing kindlin 2
involved_in
ISO
(PMID:29496737) (MGI:6149626|PMID:29496737)
RGD
PMID:29496737
MGI:6149626
NCBI chr15:18,682,927...18,751,959
Ensembl chr15:18,682,927...18,751,811
G
Ffar4
free fatty acid receptor 4
involved_in
ISS ISO
GO_REF:0000024 (MGI:6220333|PMID:26365922)
UniProt RGD
PMID:26365922
GO_REF:0000024 MGI:6220333
NCBI chr 1:235,873,576...235,891,597
Ensembl chr 1:235,873,576...235,891,597
G
Fgf2
fibroblast growth factor 2
acts_upstream_of_or_within
ISO
MGI:95729 (PMID:20570969)
RGD
PMID:20570969
NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
G
Fzd1
frizzled class receptor 1
involved_in
ISO
(PMID:20039315)
RGD
PMID:20039315
NCBI chr 4:29,310,303...29,314,701
Ensembl chr 4:29,310,091...29,312,643 Ensembl chr 4:29,310,091...29,312,643
G
Gdf10
growth differentiation factor 10
involved_in
IDA IBA IEA
GO_REF:0000033 GO_REF:0000118
GO_Central TreeGrafter RGD
PMID:12559390
GO_REF:0000033 GO_REF:0000118, RGD:2316372
NCBI chr16:9,237,182...9,250,537
Ensembl chr16:9,237,261...9,249,343
G
Gdpd2
glycerophosphodiester phosphodiesterase domain containing 2
acts_upstream_of_or_within
ISO
(PMID:12933806)
RGD
PMID:12933806
NCBI chr X:65,826,273...65,835,361
Ensembl chr X:65,826,574...65,835,361
G
Gli3
GLI family zinc finger 3
acts_upstream_of_or_within
ISO
MGI:1856276|MGI:95516 (PMID:20570969)
RGD
PMID:20570969
NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
G
Gnas
GNAS complex locus
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3043361 (PMID:15797856)
Ensembl RGD
PMID:15797856
GO_REF:0000107
NCBI chr 3:163,071,003...163,136,350
Ensembl chr 3:163,071,417...163,127,262 Ensembl chr 3:163,071,417...163,127,262
G
Hey1
hes-related family bHLH transcription factor with YRPW motif 1
acts_upstream_of_or_within
ISO
MGI:1321394|MGI:99829 (PMID:18986983)
RGD
PMID:18986983
NCBI chr 2:93,096,605...93,100,316
Ensembl chr 2:93,095,498...93,100,312
G
Ifitm1
interferon induced transmembrane protein 1
involved_in
ISO
(PMID:22634173)
RGD
PMID:22634173
NCBI chr 1:196,067,163...196,069,169
Ensembl chr 1:196,067,963...196,069,169
G
Igf1
insulin-like growth factor 1
involved_in
IDA IEA ISO
GO_REF:0000107 (PMID:16433617)
Ensembl RGD
PMID:16433617 PMID:16897348
GO_REF:0000107, RGD:1598452
NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296
G
Il6
interleukin 6
involved_in
ISO
(PMID:30545407)
RGD
PMID:30545407
NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
G
Il6st
interleukin 6 cytokine family signal transducer
involved_in
ISO IEA
(PMID:12372336) GO_REF:0000107
RGD Ensembl
PMID:12372336
GO_REF:0000107
NCBI chr 2:44,065,979...44,106,255
Ensembl chr 2:44,066,130...44,109,936
G
Ilk
integrin-linked kinase
involved_in
ISO IEA
(MGI:5009350|PMID:20675382) GO_REF:0000107
RGD Ensembl
PMID:20675382
GO_REF:0000107 MGI:5009350
NCBI chr 1:160,088,839...160,095,140
Ensembl chr 1:160,088,897...160,095,140
G
Jag1
jagged canonical Notch ligand 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:23980096)
Ensembl RGD
PMID:23980096
GO_REF:0000107
NCBI chr 3:124,406,783...124,442,220
Ensembl chr 3:124,406,794...124,442,209
G
Jund
JunD proto-oncogene, AP-1 transcription factor subunit
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1316736 (PMID:15563473)
Ensembl RGD
PMID:15563473
GO_REF:0000107
NCBI chr16:18,734,121...18,735,799
Ensembl chr16:18,734,122...18,735,799
G
Lmna
lamin A/C
IMP
RGD
PMID:22119912
RGD:10003161
NCBI chr 2:173,939,751...173,960,423
Ensembl chr 2:173,939,751...173,960,423
G
Lrp3
LDL receptor related protein 3
involved_in
ISO
(PMID:28340487)
RGD
PMID:28340487
NCBI chr 1:87,843,815...87,859,147
Ensembl chr 1:87,844,868...87,859,110
G
Lrp5
LDL receptor related protein 5
involved_in
ISO
(MGI:6162346|PMID:26891291)
RGD
PMID:26891291
MGI:6162346
NCBI chr 1:200,814,247...200,917,581
Ensembl chr 1:200,814,250...200,917,581
G
Ltf
lactotransferrin
involved_in
ISO
(PMID:15166119)
RGD
PMID:15166119
NCBI chr 8:110,999,948...111,022,795
Ensembl chr 8:110,999,948...111,022,795
G
Mef2c
myocyte enhancer factor 2C
involved_in
ISS ISO
GO_REF:0000024 (MGI:5285459|PMID:21652706)
UniProt RGD
PMID:21652706
GO_REF:0000024 MGI:5285459
NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
G
Men1
menin 1
acts_upstream_of_or_within
ISO
MGI:88177 (PMID:15150273)
RGD
PMID:15150273
NCBI chr 1:203,638,905...203,644,871
Ensembl chr 1:203,639,000...203,644,871
G
Mir200c
microRNA 200c
involved_in
ISO
(PMID:27529418)
RGD
PMID:27529418
NCBI chr 4:157,523,679...157,523,747
G
Mir20a
microRNA 20a
acts_upstream_of
ISO
(PMID:21743293)
RGD
PMID:21743293
NCBI chr15:92,181,084...92,181,168
Ensembl chr15:92,181,084...92,181,168
G
Mir20b
microRNA 20b
acts_upstream_of
ISO
(PMID:21042576)
RGD
PMID:21042576
NCBI chr X:132,422,211...132,422,282
Ensembl chr X:132,422,211...132,422,282
G
Mir21
microRNA 21
involved_in
ISO
(PMID:23239100)
RGD
PMID:23239100
NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348
G
Mir210
microRNA 210
involved_in acts_upstream_of_or_within
ISO
(PMID:26780211) (PMID:19520079)
RGD
PMID:19520079 PMID:26780211
NCBI chr 1:196,326,343...196,326,452
Ensembl chr 1:196,326,337...196,326,454
G
Mnda
myeloid cell nuclear differentiation antigen
acts_upstream_of_or_within
ISO
MGI:88177 (PMID:15557274)
RGD
PMID:15557274
NCBI chr13:86,017,888...86,035,556
Ensembl chr13:86,017,892...86,034,201
G
Msx2
msh homeobox 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:15175325)
Ensembl RGD
PMID:15175325
GO_REF:0000107
NCBI chr17:11,097,214...11,102,879
Ensembl chr17:11,097,103...11,102,879
G
Nell1
neural EGFL like 1
involved_in
ISO ISS
(PMID:21723284) GO_REF:0000024
RGD UniProt
PMID:21723284
GO_REF:0000024
NCBI chr 1:99,709,305...100,573,872
Ensembl chr 1:99,709,793...100,573,860
G
Npnt
nephronectin
involved_in
ISO
(MGI:4414689|PMID:19944102), (MGI:5285024|PMID:21689636)
RGD
PMID:19944102 PMID:21689636
MGI:4414689 MGI:5285024
NCBI chr 2:221,391,151...221,459,527
Ensembl chr 2:221,391,153...221,459,401
G
Nppc
natriuretic peptide C
IDA
RGD
PMID:17562543
RGD:1642298
NCBI chr 9:87,320,051...87,324,251
Ensembl chr 9:87,320,051...87,324,251
G
Pdlim7
PDZ and LIM domain 7
IDA
RGD
PMID:9832452
RGD:632731
NCBI chr17:9,124,565...9,139,814
Ensembl chr17:9,124,649...9,139,811
G
Ppp3ca
protein phosphatase 3 catalytic subunit alpha
involved_in
ISS ISO
GO_REF:0000024 (MGI:3610779|PMID:16286645)
UniProt RGD
PMID:16286645
GO_REF:0000024 MGI:3610779
NCBI chr 2:225,165,981...225,440,978
Ensembl chr 2:225,165,766...225,438,974
G
Prkd1
protein kinase D1
involved_in
ISS ISO
GO_REF:0000024 (MGI:5306577|PMID:19029091)
UniProt RGD
PMID:19029091
GO_REF:0000024 MGI:5306577
NCBI chr 6:67,725,193...68,039,002
Ensembl chr 6:67,725,905...68,039,042
G
Ptger4
prostaglandin E receptor 4
IMP
RGD
PMID:14751573
RGD:10043372
NCBI chr 2:54,330,563...54,347,451
Ensembl chr 2:54,335,424...54,346,670
G
Runx2
RUNX family transcription factor 2
involved_in acts_upstream_of_or_within
IEA ISO ISS
GO_REF:0000107 MGI:1316736|MGI:1341800 (PMID:15150273), (PMID:15175325), (PMID:18986983) (PMID:28703881) GO_REF:0000024
Ensembl RGD UniProt
PMID:15150273 PMID:15175325 PMID:18986983 PMID:28703881
GO_REF:0000024 GO_REF:0000107
NCBI chr 9:16,167,504...16,492,826
Ensembl chr 9:16,167,482...16,492,167
G
Scube2
signal peptide, CUB domain and EGF like domain containing 2
acts_upstream_of_or_within
ISO
MGI:5698367|MGI:96533 (PMID:25639508)
RGD
PMID:25639508
NCBI chr 1:163,831,876...163,899,925
Ensembl chr 1:163,832,015...163,899,393
G
Scube3
signal peptide, CUB domain and EGF like domain containing 3
involved_in
ISO
(PMID:33308444) (MGI:6716484|PMID:33308444)
RGD
PMID:33308444
MGI:6716484
NCBI chr20:6,199,182...6,231,100
Ensembl chr20:6,199,182...6,228,584
G
Sfrp2
secreted frizzled-related protein 2
acts_upstream_of_or_within
ISO
MGI:98956 (PMID:18166153)
RGD
PMID:18166153
NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063
G
Smad1
SMAD family member 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1316736 (PMID:15150273)
Ensembl RGD
PMID:15150273
GO_REF:0000107
NCBI chr19:28,513,130...28,573,665
Ensembl chr19:28,513,131...28,573,651
G
Smad5
SMAD family member 5
involved_in acts_upstream_of_or_within
ISO
(PMID:32271402) MGI:1316736 (PMID:15150273)
RGD
PMID:15150273 PMID:32271402
NCBI chr17:7,862,332...7,891,678
Ensembl chr17:7,864,720...7,891,634
G
Sox11
SRY-box transcription factor 11
involved_in
ISS ISO
GO_REF:0000024 (PMID:20626275)
UniProt RGD
PMID:20626275
GO_REF:0000024
NCBI chr 6:44,008,333...44,010,354
Ensembl chr 6:44,008,340...44,010,354
G
Suco
SUN domain containing ossification factor
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:4452525|PMID:20440000) GO_REF:0000024
Ensembl RGD UniProt
PMID:20440000
GO_REF:0000024 GO_REF:0000107 MGI:4452525
NCBI chr13:74,192,808...74,257,896
Ensembl chr13:74,193,573...74,257,896
G
Tent5a
terminal nucleotidyltransferase 5A
involved_in
ISO
(MGI:6717031|PMID:33882302)
RGD
PMID:33882302
MGI:6717031
NCBI chr 8:86,222,294...86,229,045
Ensembl chr 8:86,225,357...86,229,045
G
Tmem119
transmembrane protein 119
involved_in
ISO IBA
(PMID:20025746) GO_REF:0000033 (MGI:4418582|PMID:20025746), (MGI:5543589|PMID:22416756), (MGI:6294241|PMID:22579779)
RGD GO_Central
PMID:20025746 PMID:22416756 PMID:22579779
GO_REF:0000033 MGI:4418582 MGI:5543589 MGI:6294241
NCBI chr12:42,828,621...42,835,678
Ensembl chr12:42,828,418...42,835,689
G
Tp63
tumor protein p63
involved_in
ISO
(PMID:22521434)
RGD
PMID:22521434
NCBI chr11:74,838,858...75,049,764
Ensembl chr11:74,838,859...75,049,398
G
Vegfa
vascular endothelial growth factor A
acts_upstream_of_or_within
ISO
MGI:1931048 (PMID:22886301)
RGD
PMID:22886301
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
G
Wnt10b
Wnt family member 10B
acts_upstream_of_or_within
ISO
(PMID:15728361), (PMID:19723499)
RGD
PMID:15728361 PMID:19723499
NCBI chr 7:129,922,088...129,927,892
Ensembl chr 7:129,922,088...129,927,892
G
Wnt3
Wnt family member 3
involved_in
ISO
(PMID:20039315)
RGD
PMID:20039315
NCBI chr10:88,680,198...88,724,170
Ensembl chr10:88,680,248...88,724,099
G
Wnt4
Wnt family member 4
involved_in
ISO
(PMID:17720811)
RGD
PMID:17720811
NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859
G
Wnt7b
Wnt family member 7B
acts_upstream_of_or_within
ISO
(PMID:15576404)
RGD
PMID:15576404
NCBI chr 7:116,634,817...116,679,459
Ensembl chr 7:116,634,814...116,679,581
G
Wwtr1
WW domain containing transcription regulator 1
involved_in
ISO
UniProtKB:Q96AC1 (PMID:29496737)
RGD
PMID:29496737
NCBI chr 2:141,651,159...141,766,919
Ensembl chr 2:141,648,108...141,766,968
G
Yap1
Yes1 associated transcriptional regulator
involved_in
ISO IEA
(PMID:29496737) GO_REF:0000107
RGD Ensembl
PMID:29496737
GO_REF:0000107
NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010
G
Zhx3
zinc fingers and homeoboxes 3
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:21174497)
UniProt Ensembl RGD
PMID:21174497
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:149,417,787...149,548,671
Ensembl chr 3:149,417,818...149,527,079
G
Gpr68
G protein-coupled receptor 68
acts_upstream_of_or_within
ISO
MGI:3849457 (PMID:19479052)
RGD
PMID:19479052
NCBI chr 6:120,135,620...120,166,089
Ensembl chr 6:120,135,436...120,166,089
G
Ninj1
ninjurin 1
involved_in
ISO
(MGI:6458683|PMID:30700695)
RGD
PMID:30700695
MGI:6458683
NCBI chr17:15,452,804...15,461,684
Ensembl chr17:15,452,813...15,461,704
G
Slc9b2
solute carrier family 9 member B2
acts_upstream_of_or_within
ISO
(PMID:18269914)
RGD
PMID:18269914
NCBI chr 2:223,726,982...223,761,234
Ensembl chr 2:223,736,354...223,761,225
G
Tnfsf11
TNF superfamily member 11
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:18269914), (PMID:22437732), (PMID:23980096)
Ensembl RGD
PMID:18269914 PMID:22437732 PMID:23980096
GO_REF:0000107
NCBI chr15:53,673,850...53,705,325
Ensembl chr15:53,673,877...53,705,445
G
Tyrobp
transmembrane immune signaling adaptor Tyrobp
involved_in
ISO
(MGI:3653295|PMID:14969392)
RGD
PMID:14969392
MGI:3653295
NCBI chr 1:85,672,931...85,676,856
Ensembl chr 1:85,672,994...85,676,848
G
AABR07002627.1
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
Ensembl chr 1:76,911,602...76,914,024
G
Asxl2
ASXL transcriptional regulator 2
acts_upstream_of_or_within
ISO
(PMID:21490954)
RGD
PMID:21490954
NCBI chr 6:26,425,017...26,514,899
Ensembl chr 6:26,425,954...26,507,477
G
Car2
carbonic anhydrase 2
IMP
RGD
PMID:10523502
RGD:1600711
NCBI chr 2:86,741,625...86,756,766
Ensembl chr 2:86,741,626...86,756,818
G
Ccl3
C-C motif chemokine ligand 3
IDA
RGD
PMID:9920817
RGD:2303108
NCBI chr10:68,451,388...68,452,938
Ensembl chr10:68,451,388...68,452,938
G
Ccl5
C-C motif chemokine ligand 5
IDA
RGD
PMID:9920817
RGD:2303108
NCBI chr10:68,322,826...68,327,380
Ensembl chr10:68,322,829...68,327,377
G
Ccl9
C-C motif chemokine ligand 9
IMP
RGD
PMID:16304045
RGD:151665775
NCBI chr10:68,366,486...68,371,408
Ensembl chr10:68,366,487...68,371,369
G
Ccr1
C-C motif chemokine receptor 1
involved_in
ISO
(PMID:21403648)
RGD
PMID:21403648
NCBI chr 8:123,556,286...123,561,841
G
Ccr1l1
chemokine (C-C motif) receptor 1-like 1
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr 8:123,589,997...123,613,767
Ensembl chr 8:123,589,621...123,612,687
G
Creb1
cAMP responsive element binding protein 1
acts_upstream_of_or_within
ISO
(PMID:23395171)
RGD
PMID:23395171
NCBI chr 9:65,903,511...65,972,562
Ensembl chr 9:65,903,547...65,970,816
G
Csf1
colony stimulating factor 1
involved_in acts_upstream_of_or_within
ISO IEA
(PMID:15304486) MGI:1100089|MGI:1856333 (PMID:15657444), (PMID:17053831), (PMID:21048959), (PMID:9215625) GO_REF:0000107
RGD Ensembl
PMID:9215625 PMID:15304486 PMID:15657444 PMID:17053831 PMID:21048959
GO_REF:0000107
NCBI chr 2:195,377,215...195,396,608
Ensembl chr 2:195,377,215...195,411,704
G
Csf1r
colony stimulating factor 1 receptor
IMP
RGD
PMID:17121910
RGD:2293713
NCBI chr18:54,546,673...54,590,418
Ensembl chr18:54,546,659...54,590,415
G
Eeig1
estrogen-induced osteoclastogenesis regulator 1
involved_in
ISO
(MGI:6512093|PMID:32741026), (MGI:7444879|PMID:23478294)
RGD
PMID:23478294 PMID:32741026
MGI:6512093 MGI:7444879
NCBI chr 3:15,822,441...15,854,651
Ensembl chr 3:15,823,144...15,854,643
G
Fos
Fos proto-oncogene, AP-1 transcription factor subunit
acts_upstream_of_or_within
ISO
(PMID:23395171)
RGD
PMID:23395171
NCBI chr 6:105,121,170...105,124,036
Ensembl chr 6:105,121,170...105,124,036
G
Gnas
GNAS complex locus
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3043361 (PMID:15797856)
Ensembl RGD
PMID:15797856
GO_REF:0000107
NCBI chr 3:163,071,003...163,136,350
Ensembl chr 3:163,071,417...163,127,262 Ensembl chr 3:163,071,417...163,127,262
G
Gsk3b
glycogen synthase kinase 3 beta
IMP
RGD
PMID:28731198
RGD:13792731
NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
G
Ifng
interferon gamma
involved_in
ISO
(PMID:16220542)
RGD
PMID:16220542
NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375
G
Il12b
interleukin 12B
involved_in
ISO
(PMID:17888176)
RGD
PMID:17888176
NCBI chr10:28,888,832...28,903,802
Ensembl chr10:28,893,008...28,902,903
G
Il17a
interleukin 17A
involved_in
IEA ISO
GO_REF:0000107 (PMID:17888176)
Ensembl RGD
PMID:17888176
GO_REF:0000107
NCBI chr 9:23,144,402...23,147,889
Ensembl chr 9:23,144,402...23,147,889
G
Il20
interleukin 20
acts_upstream_of_or_within
ISO
(PMID:21844205)
RGD
PMID:21844205
NCBI chr13:42,380,981...42,384,625
Ensembl chr13:42,380,981...42,384,625
G
Il23a
interleukin 23 subunit alpha
involved_in
ISO
(PMID:17888176)
RGD
PMID:17888176
NCBI chr 7:721,809...723,923
Ensembl chr 7:721,809...723,923
G
Klf10
KLF transcription factor 10
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3530069 (PMID:15657444)
Ensembl RGD
PMID:15657444
GO_REF:0000107
NCBI chr 7:69,467,658...69,473,726
Ensembl chr 7:69,465,619...69,473,994
G
Nedd9
neural precursor cell expressed, developmentally down-regulated 9
involved_in
ISO
(MGI:6252929|PMID:27336669)
RGD
PMID:27336669
MGI:6252929
NCBI chr17:23,289,793...23,468,026
Ensembl chr17:23,282,326...23,468,019
G
Notch2
notch receptor 2
involved_in
IEA ISO
GO_REF:0000107 (MGI:3814108|PMID:18710934)
Ensembl RGD
PMID:18710934
GO_REF:0000107 MGI:3814108
NCBI chr 2:185,610,594...185,744,088
Ensembl chr 2:185,610,589...185,744,088
G
Ocstamp
osteoclast stimulatory transmembrane protein
involved_in
ISO
(MGI:5319606|PMID:18064667)
RGD
PMID:18064667
MGI:5319606
NCBI chr 3:154,131,113...154,141,611
Ensembl chr 3:154,132,328...154,136,991
G
Pou4f1
POU class 4 homeobox 1
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:5825429|PMID:17668438) GO_REF:0000024
Ensembl RGD UniProt
PMID:17668438
GO_REF:0000024 GO_REF:0000107 MGI:5825429
NCBI chr15:81,253,714...81,260,057
Ensembl chr15:81,257,781...81,259,728
G
Pou4f2
POU class 4 homeobox 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:5825429|PMID:17668438)
UniProt RGD
PMID:17668438
GO_REF:0000024 MGI:5825429
NCBI chr19:29,486,686...29,490,327
Ensembl chr19:29,486,686...29,490,327
G
Ppargc1b
PPARG coactivator 1 beta
involved_in
ISO IEA
(MGI:3838421|PMID:19252502) GO_REF:0000107
RGD Ensembl
PMID:19252502
GO_REF:0000107 MGI:3838421
NCBI chr18:54,758,891...54,861,103
Ensembl chr18:54,758,902...54,861,194
G
Ppp3ca
protein phosphatase 3 catalytic subunit alpha
involved_in
ISS ISO
GO_REF:0000024 (MGI:6869989|PMID:16968888)
UniProt RGD
PMID:16968888
GO_REF:0000024 MGI:6869989
NCBI chr 2:225,165,981...225,440,978
Ensembl chr 2:225,165,766...225,438,974
G
Rptor
regulatory associated protein of MTOR, complex 1
involved_in
ISO
(MGI:5822933|PMID:27879318)
RGD
PMID:27879318
MGI:5822933
NCBI chr10:104,878,487...105,176,986
Ensembl chr10:104,878,487...105,176,983
G
Tmem64
transmembrane protein 64
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:3880885 (PMID:23395171)
GO_Central RGD
PMID:23395171
GO_REF:0000033
NCBI chr 5:28,698,947...28,745,384
Ensembl chr 5:28,698,918...28,745,330
G
Tnf
tumor necrosis factor
involved_in
ISO
(PMID:17888176)
RGD
PMID:17888176
NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
G
Tnfrsf11a
TNF receptor superfamily member 11A
involved_in
ISO
(MGI:7444879|PMID:23478294)
RGD
PMID:23478294
MGI:7444879
NCBI chr13:21,928,370...21,986,719
Ensembl chr13:21,928,408...21,986,695
G
Tnfsf11
TNF superfamily member 11
acts_upstream_of_or_within involved_in
IMP ISO
MGI:102469|MGI:1339753|MGI:2158925 (PMID:15657444), (PMID:15724149), (PMID:17053831), (PMID:21048959), (PMID:21982707) (MGI:7444879|PMID:23478294) (PMID:15304486), (PMID:17241109), (PMID:19560569)
RGD
PMID:15304486 PMID:15657444 PMID:15724149 PMID:17053831 PMID:17241109 PMID:19560569 PMID:21048959 PMID:21982707 PMID:23478294 PMID:11092398 More...
MGI:7444879 , RGD:730134
NCBI chr15:53,673,850...53,705,325
Ensembl chr15:53,673,877...53,705,445
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Traf6
TNF receptor associated factor 6
involved_in
ISO IEA
(PMID:17135271) GO_REF:0000107
RGD Ensembl
PMID:17135271
GO_REF:0000107
NCBI chr 3:87,963,517...87,988,316
Ensembl chr 3:87,963,514...87,983,507
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Trem2
triggering receptor expressed on myeloid cells 2
involved_in
ISO
(MGI:6294223|PMID:16418779)
RGD
PMID:16418779
MGI:6294223
NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170
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Crx
cone-rod homeobox
IEP
RGD
PMID:16799048
RGD:1600973
NCBI chr 1:76,539,812...76,553,694
Ensembl chr 1:76,540,141...76,545,818
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Shh
sonic hedgehog signaling molecule
IDA
RGD
PMID:9236238
RGD:2306313
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
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Bloc1s5
biogenesis of lysosomal organelles complex 1 subunit 5
involved_in
ISO
(PMID:17182842)
RGD
PMID:17182842
NCBI chr17:26,171,965...26,197,276
Ensembl chr17:26,172,018...26,197,251
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Bloc1s6
biogenesis of lysosomal organelles complex 1 subunit 6
involved_in
ISS ISO
GO_REF:0000024 (PMID:17182842)
UniProt RGD
PMID:17182842
GO_REF:0000024
NCBI chr 3:109,816,397...109,826,528
Ensembl chr 3:109,816,366...109,828,308
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Il10
interleukin 10
acts_upstream_of
ISO
UniProtKB:P60568 (PMID:22962438)
RGD
PMID:22962438
NCBI chr13:42,472,625...42,477,308
Ensembl chr13:42,472,839...42,477,313
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Il2
interleukin 2
acts_upstream_of
ISO
UniProtKB:P22301 (PMID:22962438)
RGD
PMID:22962438
NCBI chr 2:120,004,862...120,009,566
Ensembl chr 2:120,004,862...120,009,566
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Xbp1
X-box binding protein 1
involved_in
ISO IEA ISS
(PMID:11460154) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:11460154
GO_REF:0000024 GO_REF:0000107
NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
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Mpl
MPL proto-oncogene, thrombopoietin receptor
IMP
RGD
PMID:10606160
RGD:10449003
NCBI chr 5:131,973,895...131,987,472
Ensembl chr 5:131,973,895...131,986,797
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Prkdc
protein kinase, DNA-activated, catalytic subunit
involved_in
ISO
(MGI:6414739|PMID:32103174)
RGD
PMID:32103174
MGI:6414739
NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952
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Ahi1
Abelson helper integration site 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:5306539|PMID:21959375)
UniProt RGD
PMID:21959375
GO_REF:0000024 MGI:5306539
NCBI chr 1:15,762,485...15,891,213
Ensembl chr 1:15,762,462...15,891,041
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Numb
NUMB, endocytic adaptor protein
acts_upstream_of_or_within
ISO
(PMID:21385765)
RGD
PMID:21385765
NCBI chr 6:103,431,400...103,553,422
Ensembl chr 6:103,431,400...103,553,354
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Nudt21
nudix hydrolase 21
involved_in
ISS ISO
GO_REF:0000024 (MGI:6110185|PMID:29249356)
UniProt RGD
PMID:29249356
GO_REF:0000024 MGI:6110185
NCBI chr19:10,974,800...10,993,841
Ensembl chr19:10,974,241...10,991,682
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Zbtb1
zinc finger and BTB domain containing 1
involved_in
ISO
(MGI:5446979|PMID:22753936)
RGD
PMID:22753936
MGI:5446979
NCBI chr 6:95,096,838...95,125,811
Ensembl chr 6:95,096,387...95,118,996
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Ambra1
autophagy and beclin 1 regulator 1
involved_in
ISO
(PMID:30513302) (MGI:6284097|PMID:30513302)
RGD
PMID:30513302
MGI:6284097
NCBI chr 3:77,700,936...77,890,221
Ensembl chr 3:77,700,936...77,890,221
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Bcl6
BCL6, transcription repressor
involved_in
ISO
(PMID:20935202), (PMID:22387553)
RGD
PMID:20935202 PMID:22387553
NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389
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Btn2a2
butyrophilin, subfamily 2, member A2
acts_upstream_of_or_within
ISO
(PMID:23589618)
RGD
PMID:23589618
NCBI chr17:41,620,807...41,632,621
Ensembl chr17:41,620,839...41,632,618
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Carmil2
capping protein regulator and myosin 1 linker 2
acts_upstream_of_or_within
ISO
MGI:4462559|MGI:5547539 (PMID:23793062)
RGD
PMID:23793062
NCBI chr19:33,571,255...33,586,783
Ensembl chr19:33,574,257...33,586,965
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Cd46
CD46 molecule
involved_in
ISO
(PMID:12540904)
RGD
PMID:12540904
NCBI chr13:106,575,586...106,606,325
Ensembl chr13:106,574,858...106,660,445
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Dusp10
dual specificity phosphatase 10
involved_in
ISO
(PMID:22387553)
RGD
PMID:22387553
NCBI chr13:95,613,716...95,651,716
Ensembl chr13:95,614,292...95,651,716
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Foxo3
forkhead box O3
involved_in
ISO
(PMID:30513302)
RGD
PMID:30513302
NCBI chr20:45,669,708...45,764,606
Ensembl chr20:45,672,995...45,764,561
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Foxp3
forkhead box P3
involved_in acts_upstream_of_or_within
ISO
(PMID:30513302) MGI:2654936 (PMID:12522256), (PMID:15100250), (PMID:15780990), (PMID:16769892), (PMID:17028180)
RGD
PMID:12522256 PMID:15100250 PMID:15780990 PMID:16769892 PMID:17028180 PMID:30513302 More...
NCBI chr X:14,908,494...14,924,994
Ensembl chr X:14,908,494...14,923,838
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Il2
interleukin 2
IDA
RGD
PMID:6233372
RGD:1600097
NCBI chr 2:120,004,862...120,009,566
Ensembl chr 2:120,004,862...120,009,566
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Il4i1
interleukin 4 induced 1
involved_in
ISO
(PMID:25778793) (MGI:5753024|PMID:25778793)
RGD
PMID:25778793
MGI:5753024
NCBI chr 1:95,299,457...95,324,564
Ensembl chr 1:95,295,601...95,324,562
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Kat5
lysine acetyltransferase 5
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:5576410|PMID:24835996) (PMID:24835996)
UniProt Ensembl RGD
PMID:24835996
GO_REF:0000024 GO_REF:0000107 MGI:5576410
NCBI chr 1:202,895,751...202,903,178
Ensembl chr 1:202,895,751...202,903,458
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Lgals9
galectin 9
involved_in
ISO
(MGI:5688819|PMID:25065622)
RGD
PMID:25065622
MGI:5688819
NCBI chr10:63,907,018...63,930,224
Ensembl chr10:63,907,018...63,930,045
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Lilrb4
leukocyte immunoglobulin like receptor B4
involved_in
ISO
(PMID:20935202), (PMID:22387553)
RGD
PMID:20935202 PMID:22387553
NCBI chr 1:69,805,020...69,810,628
Ensembl chr 1:69,805,250...69,810,660
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Mir214
microRNA 214
IMP
RGD
PMID:30287503
RGD:38549580
NCBI chr13:74,588,374...74,588,481
Ensembl chr13:74,588,372...74,588,481
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RT1-M3-1
RT1 class Ib, locus M3, gene 1
involved_in
ISO
(PMID:20448110)
RGD
PMID:20448110
NCBI chr20:1,323,976...1,328,126
Ensembl chr20:1,287,521...1,328,117
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Socs1
suppressor of cytokine signaling 1
involved_in
ISO IEA
(PMID:22387553) GO_REF:0000107
RGD Ensembl
PMID:22387553
GO_REF:0000107
NCBI chr10:4,882,651...4,884,342
Ensembl chr10:4,882,560...4,884,383
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Sox12
SRY-box transcription factor 12
involved_in
ISO
(MGI:6203502|PMID:30190287)
RGD
PMID:30190287
MGI:6203502
NCBI chr 3:140,859,499...140,860,518
Ensembl chr 3:140,856,579...140,860,975
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Tgfb1
transforming growth factor, beta 1
involved_in
ISO
(MGI:5688819|PMID:25065622)
RGD
PMID:25065622
MGI:5688819
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
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Vsir
V-set immunoregulatory receptor
involved_in
ISO
(PMID:24691993)
RGD
PMID:24691993
NCBI chr20:28,281,582...28,307,262
Ensembl chr20:28,281,596...28,303,878
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Bmp10
bone morphogenetic protein 10
involved_in
ISO IEA
(PMID:17921333) GO_REF:0000107
RGD Ensembl
PMID:17921333
GO_REF:0000107
NCBI chr 4:119,872,066...119,877,694
Ensembl chr 4:119,872,045...119,878,627
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Edn1
endothelin 1
involved_in
ISO
(PMID:12847114)
RGD
PMID:12847114
NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
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Ep300
E1A binding protein p300
IMP
RGD
PMID:12724418
RGD:2312280
NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088 Ensembl chr 7:113,106,247...113,136,088
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Mylk3
myosin light chain kinase 3
involved_in
IDA
PMID:17885681
BHF-UCL
PMID:17885681
RGD:8554371
NCBI chr19:21,685,085...21,743,587
Ensembl chr19:21,691,929...21,742,954
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Prkd1
protein kinase D1
IMP
RGD
PMID:16648482
RGD:243065275
NCBI chr 6:67,725,193...68,039,002
Ensembl chr 6:67,725,905...68,039,042
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Prox1
prospero homeobox 1
involved_in
ISO
(MGI:3830437|PMID:19091769)
RGD
PMID:19091769
MGI:3830437
NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
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Bag1
BAG cochaperone 1
IMP
RGD
PMID:23108487
RGD:13506903
NCBI chr 5:56,068,494...56,081,075
Ensembl chr 5:56,068,494...56,081,075
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Dicer1
dicer 1 ribonuclease III
involved_in
ISO
(MGI:4454581|PMID:20463238), (MGI:4830414|PMID:20805985)
RGD
PMID:20463238 PMID:20805985
MGI:4454581 MGI:4830414
NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
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Egr2
early growth response 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:1331140|PMID:10068633)
UniProt RGD
PMID:10068633
GO_REF:0000024 MGI:1331140
NCBI chr20:21,051,270...21,056,322
Ensembl chr20:21,051,277...21,055,562
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Rela
RELA proto-oncogene, NF-kB subunit
IMP
RGD
PMID:18385332
RGD:2298785
NCBI chr 1:202,925,001...202,935,484
Ensembl chr 1:202,924,945...202,935,484
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Gfap
glial fibrillary acidic protein
acts_upstream_of_or_within
ISO
MGI:1857176 (PMID:16988027)
RGD
PMID:16988027
NCBI chr10:87,852,891...87,861,631
Ensembl chr10:87,852,890...87,861,589
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Mir221
microRNA 221
IMP
RGD
PMID:22393241
RGD:11041067
NCBI chr X:3,429,465...3,429,573
Ensembl chr X:3,429,465...3,429,573
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Mir222
microRNA 222
IMP
RGD
PMID:22393241
RGD:11041067
NCBI chr X:3,428,904...3,429,006
Ensembl chr X:3,428,904...3,429,006
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Nrg1
neuregulin 1
IMP
RGD
PMID:9417836
RGD:10449005
NCBI chr16:59,250,658...60,304,519
Ensembl chr16:59,250,854...60,296,884
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Bmal1
basic helix-loop-helix ARNT like 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:5553223|PMID:23525013)
UniProt RGD
PMID:23525013
GO_REF:0000024 MGI:5553223
NCBI chr 1:167,331,756...167,430,235
Ensembl chr 1:167,331,633...167,430,231
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Gpc1
glypican 1
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:4461098|PMID:20100867) GO_REF:0000107
UniProt RGD Ensembl
PMID:20100867
GO_REF:0000024 GO_REF:0000107 MGI:4461098
NCBI chr 9:93,396,234...93,424,047
Ensembl chr 9:93,396,234...93,424,047
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Mef2c
myocyte enhancer factor 2C
involved_in
ISO IEA ISS
(PMID:21556048) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:21556048
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
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Mir675
microRNA 675
acts_upstream_of_or_within
ISO
(PMID:24532688)
RGD
PMID:24532688
NCBI chr 1:197,732,275...197,732,358
Ensembl chr 1:197,732,275...197,732,358
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Actn3
actinin alpha 3
involved_in
ISO
(MGI:3778600|PMID:18178581)
RGD
PMID:18178581
MGI:3778600
NCBI chr 1:202,159,081...202,175,012
Ensembl chr 1:202,159,082...202,175,012
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Bcl2
BCL2, apoptosis regulator
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857134 (PMID:11146504)
Ensembl RGD
PMID:11146504
GO_REF:0000107
NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743 Ensembl chr13:22,684,989...22,853,743
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Lmod3
leiomodin 3
involved_in
ISO
(PMID:25250574)
RGD
PMID:25250574
NCBI chr 4:129,843,964...129,858,684
Ensembl chr 4:129,843,970...129,858,244
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Myf5
myogenic factor 5
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:42,802,946...42,806,177
Ensembl chr 7:42,802,946...42,806,177
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Myf6
myogenic factor 6
involved_in
IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr 7:42,813,008...42,814,852
Ensembl chr 7:42,812,792...42,814,852
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Myod1
myogenic differentiation 1
involved_in
IBA IEA
GO_REF:0000033 GO_REF:0000118
GO_Central TreeGrafter
GO_REF:0000033 GO_REF:0000118
NCBI chr 1:96,884,864...96,887,574
Ensembl chr 1:96,884,948...96,887,554
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Myog
myogenin
involved_in
ISS IBA IEA ISO
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 (MGI:62381|PMID:8393145)
UniProt GO_Central Ensembl RGD
PMID:8393145
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:62381
NCBI chr13:45,745,455...45,748,044
Ensembl chr13:45,745,436...45,748,039
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Shox2
SHOX homeobox 2
involved_in
ISO IEA
(MGI:4946446|PMID:21156168) GO_REF:0000107
RGD Ensembl
PMID:21156168
GO_REF:0000107 MGI:4946446
NCBI chr 2:151,217,049...151,227,180
Ensembl chr 2:151,217,552...151,227,143
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Rbm24
RNA binding motif protein 24
involved_in
ISO
(MGI:6148527|PMID:25313962)
RGD
PMID:25313962
MGI:6148527
NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102
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Kat8
lysine acetyltransferase 8
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr 1:182,524,355...182,536,638
Ensembl chr 1:182,515,327...182,536,633
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Mir34a
microRNA 34a
involved_in
ISO
(PMID:25526086)
RGD
PMID:25526086
NCBI chr 5:160,533,002...160,533,103
Ensembl chr 5:160,533,002...160,533,103
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Myocd
myocardin
involved_in
ISO IEA
(PMID:18451334) GO_REF:0000107
RGD Ensembl
PMID:18451334
GO_REF:0000107
NCBI chr10:49,833,219...49,928,806
Ensembl chr10:49,836,641...49,927,627
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Notch1
notch receptor 1
involved_in
ISO
(PMID:18239137)
RGD
PMID:18239137
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
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Notch2
notch receptor 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:18239137)
Ensembl RGD
PMID:18239137
GO_REF:0000107
NCBI chr 2:185,610,594...185,744,088
Ensembl chr 2:185,610,589...185,744,088
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Notch4
notch receptor 4
involved_in
ISO
(PMID:18239137)
RGD
PMID:18239137
NCBI chr20:4,160,362...4,184,466
Ensembl chr20:4,160,445...4,184,465
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Olfm2
olfactomedin 2
involved_in
ISO ISS
(PMID:25298399) GO_REF:0000024
RGD UniProt
PMID:25298399
GO_REF:0000024
NCBI chr 8:19,204,472...19,282,154
Ensembl chr 8:19,204,475...19,282,117
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Pias1
protein inhibitor of activated STAT, 1
IMP
RGD
PMID:16135793
RGD:2303115
NCBI chr 8:63,338,150...63,451,670
Ensembl chr 8:63,338,150...63,438,905
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Sirt1
sirtuin 1
involved_in
ISO IEA
(MGI:5810254|PMID:25526086) GO_REF:0000107
RGD Ensembl
PMID:25526086
GO_REF:0000107 MGI:5810254
NCBI chr20:25,307,225...25,329,273
Ensembl chr20:25,306,917...25,329,260
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Smarcd3
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
IDA
RGD
PMID:23110084
RGD:9586362
NCBI chr 4:10,548,693...10,580,334
Ensembl chr 4:10,548,751...10,580,326
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Tgfb1
transforming growth factor, beta 1
acts_upstream_of_or_within
IDA
PMID:8616889
MGI
PMID:8616889
RGD:8553354
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
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Tshz3
teashirt zinc finger homeobox 3
acts_upstream_of_or_within
ISO
MGI:3810527 (PMID:18776146)
RGD
PMID:18776146
NCBI chr 1:89,386,732...89,460,719
Ensembl chr 1:89,381,858...89,460,874
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Adam7
ADAM metallopeptidase domain 7
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:5696682|PMID:26246218) GO_REF:0000024
Ensembl RGD UniProt
PMID:26246218
GO_REF:0000024 GO_REF:0000107 MGI:5696682
NCBI chr15:42,833,796...42,882,201
Ensembl chr15:42,833,796...42,882,201
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Tmprss12
transmembrane serine protease 12
involved_in
ISO
(MGI:7277967|PMID:35547804)
RGD
PMID:35547804
MGI:7277967
NCBI chr 7:131,433,158...131,445,806
Ensembl chr 7:131,433,484...131,445,791
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Fgf2
fibroblast growth factor 2
acts_upstream_of_or_within
ISO
(PMID:15781473)
RGD
PMID:15781473
NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221
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Gsk3b
glycogen synthase kinase 3 beta
acts_upstream_of_or_within
ISO
(PMID:22064483)
RGD
PMID:22064483
NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
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Hoxb4
homeo box B4
involved_in
ISO
(PMID:18932205)
RGD
PMID:18932205
NCBI chr10:81,284,552...81,287,134
Ensembl chr10:81,284,552...81,287,128
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Men1
menin 1
acts_upstream_of_or_within
ISO
MGI:2683274|MGI:3573783 (PMID:17927973)
RGD
PMID:17927973
NCBI chr 1:203,638,905...203,644,871
Ensembl chr 1:203,639,000...203,644,871
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Mir100
microRNA 100
acts_upstream_of_or_within
ISO
(PMID:20439489)
RGD
PMID:20439489
NCBI chr 8:41,901,225...41,901,304
Ensembl chr 8:41,901,225...41,901,304
G
Mir137
microRNA 137
acts_upstream_of_or_within
ISO
(PMID:20439489)
RGD
PMID:20439489
NCBI chr 2:206,480,881...206,480,982
Ensembl chr 2:206,480,884...206,480,985
G
Mir34a
microRNA 34a
acts_upstream_of_or_within
ISO
(PMID:20439489)
RGD
PMID:20439489
NCBI chr 5:160,533,002...160,533,103
Ensembl chr 5:160,533,002...160,533,103
G
Mtch2
mitochondrial carrier 2
involved_in
ISO
(MGI:6267820|PMID:30510213)
RGD
PMID:30510213
MGI:6267820
NCBI chr 3:76,830,549...76,850,189
Ensembl chr 3:76,830,413...76,850,189
G
Nudt21
nudix hydrolase 21
involved_in
ISS ISO
GO_REF:0000024 (MGI:6110185|PMID:29249356)
UniProt RGD
PMID:29249356
GO_REF:0000024 MGI:6110185
NCBI chr19:10,974,800...10,993,841
Ensembl chr19:10,974,241...10,991,682
G
Ptn
pleiotrophin
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:3045656|PMID:15121180)
UniProt Ensembl RGD
PMID:15121180
GO_REF:0000024 GO_REF:0000107 MGI:3045656
NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456
G
Pwp1
PWP1 homolog, endonuclein
acts_upstream_of_or_within
ISO
(PMID:25335925)
RGD
PMID:25335925
NCBI chr 7:17,982,730...17,998,728
Ensembl chr 7:17,982,235...17,998,731
G
Rbm24
RNA binding motif protein 24
involved_in
ISO
(PMID:26990106)
RGD
PMID:26990106
NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102
G
Sirt6
sirtuin 6
involved_in
ISO
(MGI:6284084|PMID:29555651), (MGI:6757299|PMID:25915124) (PMID:27912097)
RGD
PMID:25915124 PMID:27912097 PMID:29555651
MGI:6284084 MGI:6757299
NCBI chr 7:8,082,312...8,087,776
Ensembl chr 7:8,082,364...8,098,914
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Sox17
SRY-box transcription factor 17
acts_upstream_of_or_within
ISO
MGI:3717118 (PMID:20123909)
RGD
PMID:20123909
NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228
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Sp7
Sp7 transcription factor
involved_in
ISO
(PMID:18932205)
RGD
PMID:18932205
NCBI chr 7:133,484,609...133,494,788
Ensembl chr 7:133,484,609...133,494,847
G
Tacstd2
tumor-associated calcium signal transducer 2
involved_in acts_upstream_of_or_within
IEA ISO IBA
GO_REF:0000107 (PMID:23070813) GO_REF:0000033
Ensembl RGD GO_Central
PMID:23070813
GO_REF:0000033 GO_REF:0000107
NCBI chr 4:96,707,950...96,709,650
Ensembl chr 4:96,707,951...96,709,650
G
Tcf15
transcription factor 15
involved_in
ISO
(MGI:6508503|PMID:23395635)
RGD
PMID:23395635
MGI:6508503
NCBI chr 3:140,638,984...140,644,766
Ensembl chr 3:140,638,984...140,644,766
G
Vsir
V-set immunoregulatory receptor
acts_upstream_of_or_within
ISO
MGI:2676809 (PMID:22751012)
RGD
PMID:22751012
NCBI chr20:28,281,582...28,307,262
Ensembl chr20:28,281,596...28,303,878
G
Hopx
HOP homeobox
acts_upstream_of_or_within
ISO
MGI:2389244 (PMID:17192267)
RGD
PMID:17192267
NCBI chr14:31,055,912...31,082,909
Ensembl chr14:31,075,148...31,082,909
G
Mesp1
mesoderm posterior bHLH transcription factor 1
involved_in
ISO
(MGI:4441249|PMID:18593560)
RGD
PMID:18593560
MGI:4441249
NCBI chr 1:133,738,357...133,739,875
Ensembl chr 1:133,738,357...133,739,875
G
Morf4l2
mortality factor 4 like 2
acts_upstream_of_or_within
IDA
PMID:17192267
MGI
PMID:17192267
RGD:8553913
NCBI chr X:100,082,562...100,093,658
Ensembl chr X:100,082,404...100,093,728
G
Nek5
NIMA-related kinase 5
acts_upstream_of_or_within
ISO
(PMID:23727203)
RGD
PMID:23727203
NCBI chr16:69,895,414...69,938,668
Ensembl chr16:69,895,422...69,939,429
G
Nrg1
neuregulin 1
involved_in
ISO
(MGI:3701380|PMID:17336907)
RGD
PMID:17336907
MGI:3701380
NCBI chr16:59,250,658...60,304,519
Ensembl chr16:59,250,854...60,296,884
G
Shh
sonic hedgehog signaling molecule
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857796|MGI:1861186 (PMID:11171399)
Ensembl RGD
PMID:11171399
GO_REF:0000107
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Trim32
tripartite motif-containing 32
acts_upstream_of_or_within
ISO
MGI:3837468 (PMID:22299041)
RGD
PMID:22299041
NCBI chr 5:79,005,139...79,016,615
Ensembl chr 5:78,999,389...79,022,018
G
Ada
adenosine deaminase
acts_upstream_of_or_within
ISO
MGI:1857117|MGI:2683027 (PMID:7731963), (PMID:9478961)
RGD
PMID:7731963 PMID:9478961
NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088
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Bad
BCL2-associated agonist of cell death
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3029528 (PMID:12431371)
Ensembl RGD
PMID:12431371
GO_REF:0000107
NCBI chr 1:204,133,502...204,142,829
Ensembl chr 1:204,131,501...204,142,823
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Cd27
CD27 molecule
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 4:158,030,700...158,035,862
Ensembl chr 4:158,030,703...158,035,592
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Cd74
CD74 molecule
acts_upstream_of_or_within
ISO
MGI:1927205|MGI:1927530 (PMID:7679955), (PMID:8598040), (PMID:9432982)
RGD
PMID:7679955 PMID:8598040 PMID:9432982
NCBI chr18:54,256,757...54,266,003
Ensembl chr18:54,256,778...54,266,003
G
Cyld
CYLD lysine 63 deubiquitinase
acts_upstream_of_or_within
ISO
MGI:3664438 (PMID:16501569)
RGD
PMID:16501569
NCBI chr19:18,310,632...18,373,696
Ensembl chr19:18,314,019...18,373,658
G
Gata3
GATA binding protein 3
involved_in
ISO
(MGI:5285154|PMID:20696860)
RGD
PMID:20696860
MGI:5285154
NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
G
Il12a
interleukin 12A
acts_upstream_of_or_within
ISO
MGI:1916927 (PMID:22968459)
RGD
PMID:22968459
NCBI chr 2:152,965,769...152,973,035
Ensembl chr 2:152,965,769...152,972,734
G
Il1rl2
interleukin 1 receptor-like 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:22968459)
Ensembl RGD
PMID:22968459
GO_REF:0000107
NCBI chr 9:42,591,658...42,639,351
Ensembl chr 9:42,591,934...42,636,667
G
Il2
interleukin 2
IDA
RGD
PMID:9352365
RGD:1600138
NCBI chr 2:120,004,862...120,009,566
Ensembl chr 2:120,004,862...120,009,566
G
Il2ra
interleukin 2 receptor subunit alpha
IMP
RGD
PMID:9352365
RGD:1600138
NCBI chr17:66,849,974...66,898,665
Ensembl chr17:66,849,974...66,898,697
G
Il36b
interleukin 36, beta
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:96539 (PMID:22968459)
GO_Central RGD
PMID:22968459
GO_REF:0000033
NCBI chr 3:7,024,881...7,030,388
Ensembl chr 3:7,021,973...7,031,619
G
Il4
interleukin 4
involved_in
ISO
(PMID:20554961)
RGD
PMID:20554961
NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750
G
Il7
interleukin 7
involved_in acts_upstream_of_or_within
IEA ISO ISS
GO_REF:0000107 (PMID:12431371) GO_REF:0000024
Ensembl RGD UniProt
PMID:12431371
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:94,235,219...94,280,075
Ensembl chr 2:94,234,766...94,280,075
G
Mdk
midkine
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:5897914|PMID:28183532)
UniProt Ensembl RGD
PMID:28183532
GO_REF:0000024 GO_REF:0000107 MGI:5897914
NCBI chr 3:77,901,134...77,903,997
Ensembl chr 3:77,901,158...77,903,130
G
Pik3r6
phosphoinositide-3-kinase, regulatory subunit 6
involved_in
ISO
(MGI:3641361|PMID:12707323)
RGD
PMID:12707323
MGI:3641361
NCBI chr10:53,203,930...53,255,229
Ensembl chr10:53,205,496...53,255,243
G
Ptprc
protein tyrosine phosphatase, receptor type, C
acts_upstream_of_or_within
ISO
MGI:1857277 (PMID:8666928)
RGD
PMID:8666928
NCBI chr13:49,596,193...49,708,283
Ensembl chr13:49,596,193...49,708,692
G
Rag1
recombination activating 1
involved_in
ISO
(MGI:50458|PMID:1547488)
RGD
PMID:1547488
MGI:50458
NCBI chr 3:87,917,061...87,928,158
Ensembl chr 3:87,917,004...87,928,291
G
Rhoh
ras homolog family member H
involved_in
ISO
(PMID:22850876)
RGD
PMID:22850876
NCBI chr14:42,341,135...42,371,971
Ensembl chr14:42,337,751...42,386,369
G
RT1-Ba
RT1 class II, locus Ba
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:8598041)
Ensembl RGD
PMID:8598041
GO_REF:0000107
NCBI chr20:4,575,134...4,579,727
Ensembl chr20:4,575,134...4,579,744
G
RT1-DMa
RT1 class II, locus DMa
acts_upstream_of_or_within
ISO
MGI:1861933|MGI:2384509|MGI:2652160 (PMID:8598040), (PMID:8598041), (PMID:8638109), (PMID:9432982)
RGD
PMID:8598040 PMID:8598041 PMID:8638109 PMID:9432982
NCBI chr20:4,707,028...4,710,432
Ensembl chr20:4,707,028...4,710,432
G
Wnt10b
Wnt family member 10B
acts_upstream_of_or_within
ISO
(PMID:19723499)
RGD
PMID:19723499
NCBI chr 7:129,922,088...129,927,892
Ensembl chr 7:129,922,088...129,927,892
G
Xbp1
X-box binding protein 1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:11460154)
UniProt Ensembl RGD
PMID:11460154
GO_REF:0000024 GO_REF:0000107
NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
G
Zap70
zeta chain of T cell receptor associated protein kinase 70
acts_upstream_of_or_within
ISO
(PMID:7630421) MGI:2677447|MGI:3526403 (PMID:9208839)
RGD
PMID:7630421 PMID:9208839
NCBI chr 9:38,989,750...39,011,701
Ensembl chr 9:38,989,750...39,011,700
G
Zbtb1
zinc finger and BTB domain containing 1
involved_in
ISO
(MGI:5300225|PMID:22201126)
RGD
PMID:22201126
MGI:5300225
NCBI chr 6:95,096,838...95,125,811
Ensembl chr 6:95,096,387...95,118,996
G
Zmiz1
zinc finger, MIZ-type containing 1
involved_in
ISO
(MGI:5790022|PMID:26522984)
RGD
PMID:26522984
MGI:5790022
NCBI chr16:1,027,083...1,232,616
Ensembl chr16:1,027,325...1,232,597
G
Ada
adenosine deaminase
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857117|MGI:2683027 (PMID:11067867), (PMID:11435465), (PMID:12163459), (PMID:16670300)
Ensembl RGD
PMID:11067867 PMID:11435465 PMID:12163459 PMID:16670300
GO_REF:0000107
NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088
G
Adam8
ADAM metallopeptidase domain 8
involved_in
ISO
(MGI:4836302|PMID:20856819)
RGD
PMID:20856819
MGI:4836302
NCBI chr 1:194,776,559...194,789,330
Ensembl chr 1:194,770,060...194,788,801
G
Egr3
early growth response 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:21737317)
Ensembl RGD
PMID:21737317
GO_REF:0000107
NCBI chr15:45,150,335...45,156,052
Ensembl chr15:45,150,567...45,154,627
G
Ihh
Indian hedgehog signaling molecule
involved_in
ISO
(MGI:3836494|PMID:19109233)
RGD
PMID:19109233
MGI:3836494
NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532
G
Il2rg
interleukin 2 receptor subunit gamma
acts_upstream_of_or_within
ISO
MGI:1857455|MGI:2429736 (PMID:9252128), (PMID:9916699)
RGD
PMID:9252128 PMID:9916699
NCBI chr X:66,395,330...66,399,026
Ensembl chr X:66,392,542...66,399,823
G
Il7r
interleukin 7 receptor
acts_upstream_of_or_within
ISO
MGI:1857198 (PMID:9215626)
RGD
PMID:9215626
NCBI chr 2:58,452,393...58,477,757
Ensembl chr 2:58,454,217...58,477,757
G
Rasgrp1
RAS guanyl releasing protein 1
involved_in
ISO IEA
(MGI:1891792|PMID:11017103) GO_REF:0000107
RGD Ensembl
PMID:11017103
GO_REF:0000107 MGI:1891792
NCBI chr 3:104,168,549...104,230,107
Ensembl chr 3:104,170,013...104,230,056
G
Shh
sonic hedgehog signaling molecule
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:3836494|PMID:19109233) GO_REF:0000107
UniProt RGD Ensembl
PMID:19109233
GO_REF:0000024 GO_REF:0000107 MGI:3836494
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Vnn1
vanin 1
involved_in
ISO
(MGI:84472|PMID:8934567)
RGD
PMID:8934567
MGI:84472
NCBI chr 1:21,537,084...21,547,395
Ensembl chr 1:21,537,094...21,547,395
G
Anxa1
annexin A1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000118 GO_REF:0000107 (PMID:17008549)
UniProt TreeGrafter Ensembl RGD
PMID:17008549
GO_REF:0000024 GO_REF:0000107 GO_REF:0000118
NCBI chr 1:217,861,175...217,877,205
Ensembl chr 1:217,861,175...217,877,343
G
Ccl19
C-C motif chemokine ligand 19
involved_in
ISO
(MGI:3576832|PMID:15845453)
RGD
PMID:15845453
MGI:3576832
NCBI chr 5:56,963,364...56,965,308
Ensembl chr 5:56,963,364...56,965,308
G
Hlx
H2.0-like homeobox
acts_upstream_of_or_within
ISO
MGI:105367|MGI:2182089 (PMID:16424184)
RGD
PMID:16424184
NCBI chr13:96,280,335...96,285,750
Ensembl chr13:96,280,339...96,285,750
G
Ripk2
receptor-interacting serine-threonine kinase 2
acts_upstream_of_or_within
ISO
MGI:2446070 (PMID:11894097)
RGD
PMID:11894097
NCBI chr 5:29,630,806...29,662,804
Ensembl chr 5:29,631,570...29,662,657
G
Socs5
suppressor of cytokine signaling 5
involved_in
ISO
(MGI:3687909|PMID:12242343)
RGD
PMID:12242343
MGI:3687909
NCBI chr 6:7,481,039...7,512,644
Ensembl chr 6:7,481,095...7,514,834
G
Malt1
MALT1 paracaspase
involved_in
ISO
(MGI:6142401|PMID:25282160)
RGD
PMID:25282160
MGI:6142401
NCBI chr18:58,942,282...58,996,318
Ensembl chr18:58,942,299...58,994,260
G
Mir326
microRNA 326
acts_upstream_of_or_within
ISO
(PMID:19838199)
RGD
PMID:19838199
NCBI chr 1:153,854,029...153,854,123
Ensembl chr 1:153,854,029...153,854,123
G
Nfkbid
NFKB inhibitor delta
involved_in
ISO
(MGI:6142401|PMID:25282160)
RGD
PMID:25282160
MGI:6142401
NCBI chr 1:85,679,353...85,690,415
Ensembl chr 1:85,680,861...85,690,447
G
Nfkbiz
NFKB inhibitor zeta
involved_in
ISO
(MGI:6142401|PMID:25282160)
RGD
PMID:25282160
MGI:6142401
NCBI chr11:44,782,676...44,810,722
Ensembl chr11:44,782,676...44,810,723
G
Nlrp3
NLR family, pyrin domain containing 3
involved_in
ISO
(MGI:5689221|PMID:26098997)
RGD
PMID:26098997
MGI:5689221
NCBI chr10:44,326,770...44,353,814
Ensembl chr10:44,328,566...44,352,811
G
Brd2
bromodomain containing 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:6106706|PMID:28262505) (PMID:28262505)
UniProt RGD
PMID:28262505
GO_REF:0000024 MGI:6106706
NCBI chr20:4,727,078...4,735,389
Ensembl chr20:4,728,151...4,735,388
G
Brd4
bromodomain containing 4
involved_in
ISO
(MGI:6106706|PMID:28262505)
RGD
PMID:28262505
MGI:6106706
NCBI chr 7:11,216,446...11,296,029
Ensembl chr 7:11,216,446...11,295,539
G
Ep300
E1A binding protein p300
involved_in
ISO
(PMID:28262505)
RGD
PMID:28262505
NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088 Ensembl chr 7:113,106,247...113,136,088
G
Il23a
interleukin 23 subunit alpha
involved_in
ISO IBA
(MGI:3851279|PMID:19501566) GO_REF:0000033
RGD GO_Central
PMID:19501566
GO_REF:0000033 MGI:3851279
NCBI chr 7:721,809...723,923
Ensembl chr 7:721,809...723,923
G
Opa1
OPA1, mitochondrial dynamin like GTPase
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr11:71,108,100...71,185,170
Ensembl chr11:71,109,873...71,185,109
G
Il18
interleukin 18
involved_in
IEA ISO
GO_REF:0000107 (MGI:3608083|PMID:12829194)
Ensembl RGD
PMID:12829194
GO_REF:0000107 MGI:3608083
NCBI chr 8:50,904,630...50,932,887
Ensembl chr 8:50,906,960...50,932,887
G
Il4r
interleukin 4 receptor
acts_upstream_of_or_within
ISO
MGI:96109 (PMID:16424184)
RGD
PMID:16424184
NCBI chr 1:180,115,061...180,139,981
Ensembl chr 1:180,115,120...180,139,980
G
Il6
interleukin 6
acts_upstream_of_or_within
ISO
(PMID:12594267)
RGD
PMID:12594267
NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
G
Nlrp3
NLR family, pyrin domain containing 3
involved_in
ISO
(MGI:5689221|PMID:26098997)
RGD
PMID:26098997
MGI:5689221
NCBI chr10:44,326,770...44,353,814
Ensembl chr10:44,328,566...44,352,811
G
Prkcz
protein kinase C, zeta
involved_in
ISS ISO
GO_REF:0000024 (MGI:3584076|PMID:15987782)
UniProt RGD
PMID:15987782
GO_REF:0000024 MGI:3584076
NCBI chr 5:165,817,786...165,930,386
Ensembl chr 5:165,819,466...165,930,367
G
Rara
retinoic acid receptor, alpha
involved_in
ISO
(PMID:18416830)
RGD
PMID:18416830
NCBI chr10:83,883,490...83,928,932
Ensembl chr10:83,893,384...83,928,142
G
Tnfsf4
TNF superfamily member 4
involved_in
ISO
(MGI:4943387|PMID:18354165)
RGD
PMID:18354165
MGI:4943387
NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788
G
Shb
SH2 domain containing adaptor protein B
acts_upstream_of_or_within
ISO
MGI:3721903 (PMID:24645804)
RGD
PMID:24645804
NCBI chr 5:59,678,066...59,785,443
Ensembl chr 5:59,678,216...59,785,538
G
Gdf7
growth differentiation factor 7
involved_in
ISO
(MGI:5294519|PMID:21412429)
RGD
PMID:21412429
MGI:5294519
NCBI chr 6:31,171,495...31,182,484
Ensembl chr 6:31,178,119...31,182,447
G
Cyp26b1
cytochrome P450, family 26, subfamily b, polypeptide 1
involved_in
ISO
(MGI:3809313|PMID:18816858)
RGD
PMID:18816858
MGI:3809313
NCBI chr 4:117,041,808...117,058,628
Ensembl chr 4:117,041,808...117,058,628
G
Tbx1
T-box transcription factor 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:3809313|PMID:18816858)
UniProt RGD
PMID:18816858
GO_REF:0000024 MGI:3809313
NCBI chr11:82,409,275...82,419,058
Ensembl chr11:82,409,275...82,418,380
G
Tert
telomerase reverse transcriptase
IMP
RGD
PMID:24376652
RGD:11038675
NCBI chr 1:29,637,213...29,659,561
Ensembl chr 1:29,637,506...29,659,561
G
Bad
BCL2-associated agonist of cell death
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:3778846|PMID:18223655)
UniProt Ensembl RGD
PMID:18223655
GO_REF:0000024 GO_REF:0000107 MGI:3778846
NCBI chr 1:204,133,502...204,142,829
Ensembl chr 1:204,131,501...204,142,823
G
Rfx3
regulatory factor X3
involved_in
ISO
(MGI:4941444|PMID:20413507)
RGD
PMID:20413507
MGI:4941444
NCBI chr 1:225,449,872...225,709,622
Ensembl chr 1:225,456,187...225,709,402
G
Shh
sonic hedgehog signaling molecule
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:2388350|PMID:12399320)
UniProt Ensembl RGD
PMID:12399320
GO_REF:0000024 GO_REF:0000107 MGI:2388350
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Eng
endoglin
involved_in
ISO
(MGI:3721185|PMID:17628518)
RGD
PMID:17628518
MGI:3721185
NCBI chr 3:15,934,566...15,972,618
Ensembl chr 3:15,934,518...15,973,230
G
Kit
KIT proto-oncogene receptor tyrosine kinase
involved_in
ISO
(PMID:19088079)
RGD
PMID:19088079
NCBI chr14:32,547,459...32,624,694
Ensembl chr14:32,548,877...32,624,652
G
Mir125b1
microRNA 125b-1
involved_in
ISO
(PMID:18548003)
RGD
PMID:18548003
NCBI chr 8:41,952,966...41,953,052
Ensembl chr 8:41,952,966...41,953,052
G
Mir125b2
microRNA 125b-2
involved_in
ISO
(PMID:18548003)
RGD
PMID:18548003
NCBI chr11:16,245,620...16,245,707
G
Mir21
microRNA 21
involved_in
ISO
(PMID:18548003)
RGD
PMID:18548003
NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348
G
Mir140
microRNA 140
involved_in
ISO
(PMID:27021683)
RGD
PMID:27021683
NCBI chr19:35,465,577...35,465,675
Ensembl chr19:35,465,577...35,465,675
G
Mir145
microRNA 145
IMP
RGD
PMID:19542014
RGD:13210556
NCBI chr18:55,099,640...55,099,727
Ensembl chr18:55,099,640...55,099,727
G
Sod2
superoxide dismutase 2
involved_in
ISO
(PMID:27021683)
RGD
PMID:27021683
NCBI chr 1:47,638,318...47,645,163
Ensembl chr 1:47,636,528...47,645,189
G
Adm
adrenomedullin
involved_in
ISO
(MGI:3772552|PMID:18097473)
RGD
PMID:18097473
MGI:3772552
NCBI chr 1:164,745,484...164,747,655
Ensembl chr 1:164,745,466...164,747,654
G
Asb4
ankyrin repeat and SOCS box-containing 4
involved_in
ISO
(MGI:3723573|PMID:17636018)
RGD
PMID:17636018
MGI:3723573
NCBI chr 4:33,506,992...33,544,630
Ensembl chr 4:33,506,992...33,544,630
G
Cd34
CD34 molecule
involved_in
ISS ISO
GO_REF:0000024 (PMID:12939361)
UniProt RGD
PMID:12939361
GO_REF:0000024
NCBI chr13:106,480,313...106,500,844
Ensembl chr13:106,480,043...106,499,832
G
Ceacam1
CEA cell adhesion molecule 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:5559845|PMID:22962327)
UniProt RGD
PMID:22962327
GO_REF:0000024 MGI:5559845
NCBI chr 1:81,043,595...81,060,050
Ensembl chr 1:81,043,595...81,059,992
G
Kdr
kinase insert domain receptor
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:4359570|PMID:19635461) GO_REF:0000107
UniProt RGD Ensembl
PMID:19635461
GO_REF:0000024 GO_REF:0000107 MGI:4359570
NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
G
Ramp2
receptor activity modifying protein 2
involved_in
ISO
(MGI:3772552|PMID:18097473)
RGD
PMID:18097473
MGI:3772552
NCBI chr10:86,187,366...86,190,692
Ensembl chr10:86,188,812...86,231,829
G
Rap1a
RAP1A, member of RAS oncogene family
involved_in
ISS ISO
GO_REF:0000024 (MGI:4359570|PMID:19635461)
UniProt RGD
PMID:19635461
GO_REF:0000024 MGI:4359570
NCBI chr 2:193,208,631...193,286,513
Ensembl chr 2:193,208,635...193,286,501
G
Rapgef2
Rap guanine nucleotide exchange factor 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:4359570|PMID:19635461)
UniProt RGD
PMID:19635461
GO_REF:0000024 MGI:4359570
NCBI chr 2:164,207,513...164,322,157
Ensembl chr 2:164,207,513...164,244,247
G
Rin2
Ras and Rab interactor 2
involved_in
ISO
(PMID:22825554)
RGD
PMID:22825554
NCBI chr 3:133,086,858...133,303,604
Ensembl chr 3:133,086,749...133,303,604
G
Rras
RAS related
involved_in
ISO
(PMID:22825554)
RGD
PMID:22825554
NCBI chr 1:95,500,582...95,504,362
Ensembl chr 1:95,500,566...95,504,357
G
Tmem100
transmembrane protein 100
involved_in
ISO
(MGI:5432418|PMID:22783020)
RGD
PMID:22783020
MGI:5432418
NCBI chr10:74,854,779...74,861,147
Ensembl chr10:74,854,468...74,862,941
G
Ankle1
ankyrin repeat and LEM domain containing 1
NOT|involved_in
ISO
(MGI:5800654|PMID:27010503)
RGD
PMID:27010503
MGI:5800654
NCBI chr16:18,076,413...18,082,356
Ensembl chr16:18,076,492...18,083,729
G
Sdc4
syndecan 4
NOT|involved_in
IDA
PMID:25089138
BHF-UCL
PMID:25089138
RGD:11079193
NCBI chr 3:153,154,888...153,173,576
Ensembl chr 3:153,154,896...153,173,580
G
Cntn2
contactin 2
acts_upstream_of_or_within
ISO
MGI:2181052 (PMID:18650339)
RGD
PMID:18650339
NCBI chr13:43,942,868...43,975,973
Ensembl chr13:43,947,265...43,975,887
G
Epha4
Eph receptor A4
involved_in
ISS ISO
GO_REF:0000024 (MGI:3530975|PMID:15537875)
UniProt RGD
PMID:15537875
GO_REF:0000024 MGI:3530975
NCBI chr 9:78,815,460...78,958,139
Ensembl chr 9:78,815,460...78,958,139
G
Qki
QKI, KH domain containing RNA binding
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:6515246|PMID:33750804) GO_REF:0000107
UniProt RGD Ensembl
PMID:33750804
GO_REF:0000024 GO_REF:0000107 MGI:6515246
NCBI chr 1:50,387,716...50,501,568
Ensembl chr 1:50,387,698...50,498,831
G
Ankle1
ankyrin repeat and LEM domain containing 1
NOT|involved_in
ISO
(MGI:5800654|PMID:27010503)
RGD
PMID:27010503
MGI:5800654
NCBI chr16:18,076,413...18,082,356
Ensembl chr16:18,076,492...18,083,729
G
Card11
caspase recruitment domain family, member 11
acts_upstream_of_or_within
ISO
MGI:3039682 (PMID:12867038)
RGD
PMID:12867038
NCBI chr12:13,621,140...13,758,115
Ensembl chr12:13,621,087...13,758,112
G
Cd24
CD24 molecule
acts_upstream_of_or_within
ISO
MGI:2179996 (PMID:7795661), (PMID:9028339)
RGD
PMID:7795661 PMID:9028339
NCBI chr20:47,074,353...47,079,662
Ensembl chr20:47,073,512...47,079,662
G
Cyld
CYLD lysine 63 deubiquitinase
acts_upstream_of_or_within
ISO
MGI:3664438 (PMID:16501569)
RGD
PMID:16501569
NCBI chr19:18,310,632...18,373,696
Ensembl chr19:18,314,019...18,373,658
G
Fas
Fas cell surface death receptor
acts_upstream_of_or_within
ISO
MGI:1856334 (PMID:6610701)
RGD
PMID:6610701
NCBI chr 1:231,798,963...231,832,591
Ensembl chr 1:231,798,960...231,832,591
G
Ikzf3
IKAROS family zinc finger 3
involved_in
ISO
(MGI:1307021|PMID:9806640)
RGD
PMID:9806640
MGI:1307021
NCBI chr10:83,460,564...83,553,591
Ensembl chr10:83,465,745...83,553,591
G
Il4i1
interleukin 4 induced 1
involved_in
ISO
(MGI:6113164|PMID:29288206)
RGD
PMID:29288206
MGI:6113164
NCBI chr 1:95,299,457...95,324,564
Ensembl chr 1:95,295,601...95,324,562
G
Mir150
microRNA 150
acts_upstream_of_or_within
ISO
MGI:3763431 (PMID:17927961)
RGD
PMID:17927961
NCBI chr 1:95,605,024...95,605,108
Ensembl chr 1:95,605,024...95,605,108
G
Nfam1
NFAT activating protein with ITAM motif 1
acts_upstream_of_or_within
ISO
(PMID:15143214)
RGD
PMID:15143214
NCBI chr 7:114,139,318...114,175,395
Ensembl chr 7:114,139,345...114,175,442
G
Ptpn6
protein tyrosine phosphatase, non-receptor type 6
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1856074 (PMID:9254656)
Ensembl RGD
PMID:9254656
GO_REF:0000107
NCBI chr 4:157,526,034...157,550,783
Ensembl chr 4:157,526,035...157,550,984
G
Slamf8
SLAM family member 8
involved_in
ISO IBA
(MGI:6215454|PMID:11313408) GO_REF:0000033
RGD GO_Central
PMID:11313408
GO_REF:0000033 MGI:6215454
NCBI chr13:85,047,729...85,057,571
Ensembl chr13:85,047,727...85,057,211
G
Tlr9
toll-like receptor 9
involved_in
ISO
(PMID:23857366)
RGD
PMID:23857366
NCBI chr 8:106,864,680...106,868,796
Ensembl chr 8:106,864,680...106,868,796
G
Zfp36l1
zinc finger protein 36, C3H type-like 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:5779430|PMID:27102483)
UniProt RGD
PMID:27102483
GO_REF:0000024 MGI:5779430
NCBI chr 6:98,930,705...98,935,748
Ensembl chr 6:98,930,718...98,935,748
G
Zfp36l2
zinc finger protein 36, C3H type-like 2
involved_in
ISO
(MGI:5779430|PMID:27102483)
RGD
PMID:27102483
MGI:5779430
NCBI chr 6:10,490,032...10,494,073
Ensembl chr 6:10,490,032...10,494,064
G
Dusp10
dual specificity phosphatase 10
acts_upstream_of_or_within
ISO
(PMID:23874687)
RGD
PMID:23874687
NCBI chr13:95,613,716...95,651,716
Ensembl chr13:95,614,292...95,651,716
G
Fto
FTO, alpha-ketoglutarate dependent dioxygenase
involved_in
ISO IEA
(PMID:26287746) GO_REF:0000107
RGD Ensembl
PMID:26287746
GO_REF:0000107
NCBI chr19:15,284,898...15,692,142
Ensembl chr19:15,349,696...15,692,083
G
Lep
leptin
involved_in
ISS ISO
GO_REF:0000024 (MGI:4821191|PMID:20620997)
UniProt RGD
PMID:20620997
GO_REF:0000024 MGI:4821191
NCBI chr 4:57,661,127...57,675,262
Ensembl chr 4:57,661,131...57,675,262
G
Mtor
mechanistic target of rapamycin kinase
IMP
RGD
PMID:20133456
RGD:10041010
NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
G
Sirt1
sirtuin 1
involved_in
ISO IEA
(MGI:4821191|PMID:20620997) GO_REF:0000107
RGD Ensembl
PMID:20620997
GO_REF:0000107 MGI:4821191
NCBI chr20:25,307,225...25,329,273
Ensembl chr20:25,306,917...25,329,260
G
Sox17
SRY-box transcription factor 17
involved_in
ISO
(MGI:3703823|PMID:17360443)
RGD
PMID:17360443
MGI:3703823
NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228
G
Sh3rf1
SH3 domain containing ring finger 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:6158776|PMID:27084103)
UniProt RGD
PMID:27084103
GO_REF:0000024 MGI:6158776
NCBI chr16:28,735,522...28,901,261
Ensembl chr16:28,735,440...28,901,644
G
Zbtb7b
zinc finger and BTB domain containing 7B
acts_upstream_of_or_within
ISO
MGI:3817628 (PMID:18776904)
RGD
PMID:18776904
NCBI chr 2:174,795,831...174,811,980
Ensembl chr 2:174,797,453...174,814,236
G
Atg7
autophagy related 7
involved_in
ISO
(MGI:4420830|PMID:20080761)
RGD
PMID:20080761
MGI:4420830
NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
G
Lrp6
LDL receptor related protein 6
acts_upstream_of_or_within
ISO
MGI:2156191 (PMID:19795519)
RGD
PMID:19795519
NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497
G
Gcm1
glial cells missing transcription factor 1
involved_in
ISO
(PMID:19219068)
RGD
PMID:19219068
NCBI chr 8:78,925,687...78,938,924
Ensembl chr 8:78,925,687...78,938,924
G
Stk3
serine/threonine kinase 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1929004 (PMID:24595170)
Ensembl RGD
PMID:24595170
GO_REF:0000107
NCBI chr 7:66,053,209...66,323,292
Ensembl chr 7:66,052,345...66,323,233
G
Stk4
serine/threonine kinase 4
acts_upstream_of_or_within
ISO
MGI:1928487 (PMID:24595170)
RGD
PMID:24595170
NCBI chr 3:152,745,958...152,827,747
Ensembl chr 3:152,745,681...152,827,744
G
Kif14
kinesin family member 14
involved_in
ISO
(MGI:5605219|PMID:24931760)
RGD
PMID:24931760
MGI:5605219
NCBI chr13:47,926,975...47,990,598
Ensembl chr13:47,927,044...47,989,164
G
Axin2
axin 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3579503 (PMID:19623616)
Ensembl RGD
PMID:19623616
GO_REF:0000107
NCBI chr10:93,893,830...93,927,042
Ensembl chr10:93,899,245...93,926,231
G
Ccn2
cellular communication network factor 2
acts_upstream_of_or_within
ISO
MGI:2663631 (PMID:18597638)
RGD
PMID:18597638
NCBI chr 1:20,802,199...20,805,315
Ensembl chr 1:20,802,199...20,805,734
G
Glg1
golgi glycoprotein 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:4829764 (PMID:20530870)
Ensembl RGD
PMID:20530870
GO_REF:0000107
NCBI chr19:39,124,892...39,224,178
Ensembl chr19:39,124,641...39,224,178
G
Hoxa11
homeobox A11
acts_upstream_of_or_within
ISO
MGI:96203 (PMID:22916278)
RGD
PMID:22916278
NCBI chr 4:81,342,527...81,346,189
Ensembl chr 4:81,342,528...81,346,232
G
Hoxd11
homeobox D11
acts_upstream_of_or_within
ISO
MGI:96172 (PMID:22916278)
RGD
PMID:22916278
NCBI chr 3:59,584,840...59,587,257
Ensembl chr 3:59,585,039...59,586,783
G
Lnpk
lunapark, ER junction formation factor
acts_upstream_of_or_within
ISO
(PMID:22916278)
RGD
PMID:22916278
NCBI chr 3:59,418,872...59,487,029
Ensembl chr 3:59,424,286...59,486,518
G
Maf
MAF bZIP transcription factor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2148636 (PMID:14512017)
Ensembl RGD
PMID:14512017
GO_REF:0000107
NCBI chr19:43,353,867...43,713,162
Ensembl chr19:43,360,342...43,712,365
G
Mboat2
membrane bound O-acyltransferase domain containing 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:6467698|PMID:29196633)
UniProt RGD
PMID:29196633
GO_REF:0000024 MGI:6467698
NCBI chr 6:41,471,135...41,597,599
Ensembl chr 6:41,471,161...41,593,485
G
Mdk
midkine
involved_in
ISO IEA ISS
(MGI:5693192|PMID:25551381) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:25551381
GO_REF:0000024 GO_REF:0000107 MGI:5693192
NCBI chr 3:77,901,134...77,903,997
Ensembl chr 3:77,901,158...77,903,130
G
Pthlh
parathyroid hormone-like hormone
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 4:180,188,792...180,199,847
Ensembl chr 4:180,188,792...180,199,847
G
Shox2
SHOX homeobox 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3628798 (PMID:16537395)
Ensembl RGD
PMID:16537395
GO_REF:0000107
NCBI chr 2:151,217,049...151,227,180
Ensembl chr 2:151,217,552...151,227,143
G
Six2
SIX homeobox 2
involved_in
ISO
(MGI:4822095|PMID:20515681)
RGD
PMID:20515681
MGI:4822095
NCBI chr 6:8,974,859...8,981,345
Ensembl chr 6:8,967,157...8,981,193
G
Trps1
transcriptional repressor GATA binding 1
involved_in
ISO
(MGI:3848565|PMID:19389374)
RGD
PMID:19389374
MGI:3848565
NCBI chr 7:81,916,668...82,142,733
Ensembl chr 7:81,921,601...82,141,905
G
Gata1
GATA binding protein 1
involved_in
ISO
(PMID:12200364), (PMID:15920471) (MGI:5284816|PMID:12200364)
RGD
PMID:12200364 PMID:15920471
MGI:5284816
NCBI chr X:14,529,706...14,537,530
Ensembl chr X:14,529,702...14,537,530
G
Rbfox2
RNA binding fox-1 homolog 2
involved_in
ISO IEA
(MGI:3770484|PMID:17715393) GO_REF:0000107
RGD Ensembl
PMID:17715393
GO_REF:0000107 MGI:3770484
NCBI chr 7:108,810,627...109,054,420
Ensembl chr 7:108,810,628...109,054,691
G
Senp1
SUMO specific peptidase 1
acts_upstream_of_or_within
ISO
MGI:3818522 (PMID:17981124)
RGD
PMID:17981124
NCBI chr 7:129,163,173...129,226,766
Ensembl chr 7:129,165,774...129,221,598
G
Zfpm1
zinc finger protein, multitype 1
involved_in
ISO
(PMID:15920471), (PMID:17207461)
RGD
PMID:15920471 PMID:17207461
NCBI chr19:50,334,352...50,391,029
Ensembl chr19:50,334,682...50,390,591
G
Cebpb
CCAAT/enhancer binding protein beta
involved_in
ISO IEA
RNAcentral:URS00000B7E30_10090 (MGI:5749907|PMID:26526992) GO_REF:0000107
RGD Ensembl
PMID:26526992
GO_REF:0000107 MGI:5749907
NCBI chr 3:156,398,035...156,399,466
Ensembl chr 3:156,397,052...156,399,473
G
Ferd3l
Fer3-like bHLH transcription factor
acts_upstream_of_or_within
ISO
MGI:4460989 (PMID:20460368)
RGD
PMID:20460368
NCBI chr 6:50,645,379...50,646,268
Ensembl chr 6:50,645,379...50,646,268
G
Tiam1
TIAM Rac1 associated GEF 1
involved_in
ISO
(MGI:5466648|PMID:23109420)
RGD
PMID:23109420
MGI:5466648
NCBI chr11:29,031,347...29,380,153
Ensembl chr11:29,031,348...29,159,901
G
Dkk1
dickkopf WNT signaling pathway inhibitor 1
involved_in
ISO
(PMID:20559569)
RGD
PMID:20559569
NCBI chr 1:228,381,521...228,385,202
Ensembl chr 1:228,381,521...228,385,202
G
Apold1
apolipoprotein L domain containing 1
involved_in
IEP IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central RGD
PMID:15102925
GO_REF:0000033 GO_REF:0000118, RGD:1303988
NCBI chr 4:167,768,437...167,825,706
Ensembl chr 4:167,818,271...167,825,706
G
Bmpr1a
bone morphogenetic protein receptor type 1A
NOT|involved_in
ISO
(MGI:4830635|PMID:20406889)
RGD
PMID:20406889
MGI:4830635
NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
G
Ceacam1
CEA cell adhesion molecule 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:3640069|PMID:16680193)
UniProt RGD
PMID:16680193
GO_REF:0000024 MGI:3640069
NCBI chr 1:81,043,595...81,060,050
Ensembl chr 1:81,043,595...81,059,992
G
Tgfb3
transforming growth factor, beta 3
TAS
RGD
PMID:12183510
RGD:727411
NCBI chr 6:105,704,058...105,726,661
Ensembl chr 6:105,704,236...105,726,564
G
Vegfa
vascular endothelial growth factor A
acts_upstream_of_or_within
ISO
(PMID:18772315)
RGD
PMID:18772315
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
G
Keap1
Kelch-like ECH-associated protein 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2681416 (PMID:15087497)
Ensembl RGD
PMID:15087497
GO_REF:0000107
NCBI chr 8:19,768,375...19,777,862
Ensembl chr 8:19,768,375...19,777,862
G
Klf7
KLF transcription factor 7
involved_in
ISO
(PMID:28916725)
RGD
PMID:28916725
NCBI chr 9:65,433,683...65,526,372
Ensembl chr 9:65,437,167...65,526,261
G
Maff
MAF bZIP transcription factor F
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:1858732|MGI:96911 (PMID:15087497)
GO_Central RGD
PMID:15087497
GO_REF:0000033
NCBI chr 7:110,912,367...110,923,711
Ensembl chr 7:110,912,499...110,923,851
G
Mafg
MAF bZIP transcription factor G
involved_in acts_upstream_of_or_within
IBA ISO IEA
GO_REF:0000033 MGI:1858732 (PMID:15087497) GO_REF:0000118
GO_Central RGD TreeGrafter
PMID:15087497
GO_REF:0000033 GO_REF:0000118
NCBI chr10:105,903,307...105,911,808
Ensembl chr10:105,903,237...105,912,026
G
Apc
APC regulator of WNT signaling pathway
acts_upstream_of_or_within
ISO
MGI:1856318 (PMID:9771477)
RGD
PMID:9771477
NCBI chr18:25,828,558...25,925,511
Ensembl chr18:25,864,222...25,922,696
G
Ascl1
achaete-scute family bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:3639318 (PMID:23284756)
RGD
PMID:23284756
NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993
G
Ctnnb1
catenin beta 1
acts_upstream_of_or_within
ISO
MGI:1858008 (PMID:12813461)
RGD
PMID:12813461
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
G
Dicer1
dicer 1 ribonuclease III
acts_upstream_of_or_within
ISO
MGI:3589208 (PMID:20102707)
RGD
PMID:20102707
NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
G
Eppk1
epiplakin 1
involved_in
ISO
(MGI:5604998|PMID:23599337)
RGD
PMID:23599337
MGI:5604998
NCBI chr 7:107,816,919...107,842,946
Ensembl chr 7:107,817,693...107,831,159
G
Foxj1
forkhead box J1
acts_upstream_of_or_within
ISO
(PMID:16574095)
RGD
PMID:16574095
NCBI chr10:101,566,299...101,570,370
Ensembl chr10:101,566,304...101,570,237
G
Gata3
GATA binding protein 3
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
G
Prlr
prolactin receptor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1888377 (PMID:11706048)
Ensembl RGD
PMID:11706048
GO_REF:0000107
NCBI chr 2:59,134,147...59,324,719
Ensembl chr 2:59,134,588...59,324,718
G
Shh
sonic hedgehog signaling molecule
IEP
RGD
PMID:14651923
RGD:1580346
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Stat5a
signal transducer and activator of transcription 5A
acts_upstream_of_or_within
ISO
MGI:1857249 (PMID:11706048)
RGD
PMID:11706048
NCBI chr10:85,785,537...85,809,869
Ensembl chr10:85,785,537...85,809,866
G
Stat5b
signal transducer and activator of transcription 5B
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2181609 (PMID:11706048)
Ensembl RGD
PMID:11706048
GO_REF:0000107
NCBI chr10:85,704,841...85,775,856
Ensembl chr10:85,705,670...85,775,668
G
Tgfb3
transforming growth factor, beta 3
TAS
RGD
PMID:12183510
RGD:727411
NCBI chr 6:105,704,058...105,726,661
Ensembl chr 6:105,704,236...105,726,564
G
Xdh
xanthine dehydrogenase
acts_upstream_of_or_within
ISO
MGI:2448161 (PMID:12502743)
RGD
PMID:12502743
NCBI chr 6:21,530,463...21,592,172
Ensembl chr 6:21,530,113...21,592,268
G
Prkx
protein kinase cAMP-dependent X-linked catalytic subunit
involved_in
ISO
(PMID:17980165)
RGD
PMID:17980165
NCBI chr X:41,823,349...41,866,844
Ensembl chr X:41,823,355...41,866,669
G
Aplf
aprataxin and PNKP like factor
involved_in
ISO
(MGI:6780835|PMID:33277378)
RGD
PMID:33277378
MGI:6780835
NCBI chr 4:120,070,471...120,122,656
Ensembl chr 4:120,070,471...120,122,633
G
Clasp1
cytoplasmic linker associated protein 1
involved_in
ISO
(PMID:23940118)
RGD
PMID:23940118
NCBI chr13:29,493,554...29,715,151
Ensembl chr13:29,493,596...29,715,146
G
Clasp2
cytoplasmic linker associated protein 2
involved_in
ISO
(PMID:23940118)
RGD
PMID:23940118
NCBI chr 8:113,677,345...113,859,957
Ensembl chr 8:113,677,284...113,858,731
G
Dag1
dystroglycan 1
involved_in
ISO
(PMID:23940118)
RGD
PMID:23940118
NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
G
Ell3
elongation factor for RNA polymerase II 3
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:5438719|PMID:22768269)
UniProt Ensembl RGD
PMID:22768269
GO_REF:0000024 GO_REF:0000107 MGI:5438719
NCBI chr 3:108,413,035...108,417,181
Ensembl chr 3:108,410,448...108,417,132
G
Epha3
Eph receptor A3
involved_in
ISS ISO
GO_REF:0000024 (MGI:3703403|PMID:17046737)
UniProt RGD
PMID:17046737
GO_REF:0000024 MGI:3703403
NCBI chr11:1,138,485...1,474,102
Ensembl chr11:1,140,985...1,473,900
G
Grem1
gremlin 1, DAN family BMP antagonist
involved_in
ISO
(PMID:16816361)
RGD
PMID:16816361
NCBI chr 3:100,512,317...100,524,001
Ensembl chr 3:100,512,313...100,524,082
G
Mcrip1
MAPK regulated co-repressor interacting protein 1
involved_in
ISO ISS
(PMID:25728771) GO_REF:0000024
RGD UniProt
PMID:25728771
GO_REF:0000024
NCBI chr10:105,820,656...105,828,146
Ensembl chr10:105,820,656...105,828,271
G
Phldb1
pleckstrin homology-like domain, family B, member 1
involved_in
ISO IEA
(PMID:23940118) GO_REF:0000107
RGD Ensembl
PMID:23940118
GO_REF:0000107
NCBI chr 8:45,003,543...45,051,541
Ensembl chr 8:45,003,538...45,051,522
G
Phldb2
pleckstrin homology-like domain, family B, member 2
involved_in
ISO
(PMID:23940118)
RGD
PMID:23940118
NCBI chr11:54,859,173...55,078,212
Ensembl chr11:54,859,135...55,078,467
G
Pofut2
protein O-fucosyltransferase 2
acts_upstream_of_or_within
ISO
MGI:3604508|MGI:4127173 (PMID:20637190)
RGD
PMID:20637190
NCBI chr20:11,367,073...11,377,788
Ensembl chr20:11,367,096...11,377,743
G
Qki
QKI, KH domain containing RNA binding
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:25768908) GO_REF:0000107
UniProt RGD Ensembl
PMID:25768908
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:50,387,716...50,501,568
Ensembl chr 1:50,387,698...50,498,831
G
Smad7
SMAD family member 7
involved_in
ISO IEA
(PMID:24887517) GO_REF:0000107
RGD Ensembl
PMID:24887517
GO_REF:0000107
NCBI chr18:68,988,429...69,016,774
Ensembl chr18:68,988,429...69,016,765
G
Tgfbr1
transforming growth factor, beta receptor 1
involved_in
ISS
GO_REF:0000024
AgBase
GO_REF:0000024
NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
G
Tiam1
TIAM Rac1 associated GEF 1
involved_in
ISO
(PMID:20826792)
RGD
PMID:20826792
NCBI chr11:29,031,347...29,380,153
Ensembl chr11:29,031,348...29,159,901
G
Tgfb1
transforming growth factor, beta 1
NOT|involved_in
ISO
(MGI:3830400|PMID:19161227)
RGD
PMID:19161227
MGI:3830400
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
G
Tgfb3
transforming growth factor, beta 3
NOT|involved_in
ISO
(MGI:3830400|PMID:19161227)
RGD
PMID:19161227
MGI:3830400
NCBI chr 6:105,704,058...105,726,661
Ensembl chr 6:105,704,236...105,726,564
G
B2m
beta-2 microglobulin
acts_upstream_of_or_within
ISO
MGI:1927183 (PMID:9531620)
RGD
PMID:9531620
NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766
G
Cdk6
cyclin-dependent kinase 6
involved_in
ISO
(PMID:12833137)
RGD
PMID:12833137
NCBI chr 4:30,637,650...30,829,688
Ensembl chr 4:30,646,460...30,829,634
G
Gfi1b
growth factor independent 1B transcriptional repressor
involved_in
ISO
(MGI:5284774|PMID:17707228)
RGD
PMID:17707228
MGI:5284774
NCBI chr 3:11,940,232...11,952,989
Ensembl chr 3:11,940,233...11,952,942
G
Hbb-b2
hemoglobin, beta adult minor chain
acts_upstream_of_or_within
ISO
(PMID:21281810)
RGD
PMID:21281810
NCBI chr 1:158,243,696...158,245,076
Ensembl chr 1:158,120,200...158,252,012
G
Hspa9
heat shock protein family A (Hsp70) member 9
involved_in
ISS ISO
GO_REF:0000024 (PMID:26702583)
UniProt RGD
PMID:26702583
GO_REF:0000024
NCBI chr18:26,536,131...26,554,294
Ensembl chr18:26,535,798...26,554,292
G
Lyn
LYN proto-oncogene, Src family tyrosine kinase
involved_in
ISS ISO
GO_REF:0000024 (MGI:5297794|PMID:10594694)
UniProt RGD
PMID:10594694
GO_REF:0000024 MGI:5297794
NCBI chr 5:16,639,512...16,755,501
Ensembl chr 5:16,639,466...16,756,868
G
Mir125a
microRNA 125a
acts_upstream_of_or_within
ISO
(PMID:20660734)
RGD
PMID:20660734
NCBI chr 1:58,677,626...58,677,710
Ensembl chr 1:58,677,626...58,677,710
G
P4htm
prolyl 4-hydroxylase, transmembrane
acts_upstream_of_or_within
ISO
MGI:5583029 (PMID:22955912)
RGD
PMID:22955912
NCBI chr 8:109,274,629...109,292,802
Ensembl chr 8:109,274,626...109,292,473
G
Setd1a
SET domain containing 1A, histone lysine methyltransferase
involved_in
ISO
(MGI:5816640|PMID:27141965)
RGD
PMID:27141965
MGI:5816640
NCBI chr 1:182,386,197...182,411,695
Ensembl chr 1:182,388,060...182,411,090
G
Spi1
Spi-1 proto-oncogene
involved_in
ISO IEA
(PMID:12833137) GO_REF:0000107
RGD Ensembl
PMID:12833137
GO_REF:0000107
NCBI chr 3:77,059,744...77,093,730
Ensembl chr 3:77,073,012...77,092,393
G
Adgra2
adhesion G protein-coupled receptor A2
involved_in acts_upstream_of_or_within
ISO
(MGI:6102983|PMID:28288111) MGI:4949903 (PMID:21421844)
RGD
PMID:21421844 PMID:28288111
MGI:6102983
NCBI chr16:64,932,964...64,971,433
Ensembl chr16:64,933,315...64,971,483
G
Reck
reversion-inducing-cysteine-rich protein with kazal motifs
involved_in
ISO
(MGI:6114565|PMID:28803732)
RGD
PMID:28803732
MGI:6114565
NCBI chr 5:58,102,961...58,169,516
Ensembl chr 5:58,102,981...58,169,502
G
Ikbkb
inhibitor of nuclear factor kappa B kinase subunit beta
involved_in
ISO IEA
(PMID:25816133) GO_REF:0000107
RGD Ensembl
PMID:25816133
GO_REF:0000107
NCBI chr16:69,319,487...69,373,251
Ensembl chr16:69,319,554...69,373,250
G
Il1b
interleukin 1 beta
involved_in
ISO
(PMID:25816133)
RGD
PMID:25816133
NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
G
Plcb1
phospholipase C beta 1
involved_in
IEA ISO
GO_REF:0000107 (MGI:5904576|PMID:27653213)
Ensembl RGD
PMID:27653213
GO_REF:0000107 MGI:5904576
NCBI chr 3:122,059,988...122,772,896
Ensembl chr 3:122,060,031...122,772,869
G
Ppp1r12a
protein phosphatase 1, regulatory subunit 12A
NOT|involved_in
ISO
(PMID:25816133)
RGD
PMID:25816133
NCBI chr 7:43,482,808...43,593,689
Ensembl chr 7:43,482,803...43,593,425
G
Rock1
Rho-associated coiled-coil containing protein kinase 1
involved_in
ISO IEA
UniProtKB:O75116 (PMID:25816133) GO_REF:0000107
RGD Ensembl
PMID:25816133
GO_REF:0000107
NCBI chr18:1,114,532...1,236,345
Ensembl chr18:1,115,905...1,235,571
G
Rock2
Rho-associated coiled-coil containing protein kinase 2
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:Q13464 (PMID:25816133)
Ensembl RGD
PMID:25816133
GO_REF:0000107
NCBI chr 6:39,679,116...39,774,033
Ensembl chr 6:39,679,082...39,774,031
G
Tnf
tumor necrosis factor
involved_in
ISO
(PMID:25816133)
RGD
PMID:25816133
NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
G
Tnfrsf1a
TNF receptor superfamily member 1A
involved_in
ISO IEA
(PMID:25816133) GO_REF:0000107
RGD Ensembl
PMID:25816133
GO_REF:0000107
NCBI chr 4:158,150,815...158,163,592
Ensembl chr 4:158,150,820...158,163,591
G
Vcl
vinculin
involved_in
IEA ISO
GO_REF:0000107 (PMID:26923917)
Ensembl RGD
PMID:26923917
GO_REF:0000107
NCBI chr15:3,265,776...3,355,586
Ensembl chr15:3,265,815...3,355,606
G
Zdhhc21
zinc finger DHHC-type palmitoyltransferase 21
involved_in
ISO
(MGI:5904576|PMID:27653213)
RGD
PMID:27653213
MGI:5904576
NCBI chr 5:97,227,621...97,286,866
Ensembl chr 5:97,229,345...97,286,537
G
Prdm1
PR/SET domain 1
involved_in
ISO
(MGI:5779429|PMID:27102484)
RGD
PMID:27102484
MGI:5779429
NCBI chr20:47,959,858...47,981,488
Ensembl chr20:47,959,858...47,981,488
G
Zfp683
zinc finger protein 683
involved_in
ISO
(MGI:5779429|PMID:27102484)
RGD
PMID:27102484
MGI:5779429
NCBI chr 5:146,277,972...146,285,856
Ensembl chr 5:146,278,978...146,285,000
G
Alms1
ALMS1, centrosome and basal body associated protein
acts_upstream_of_or_within
ISO
MGI:3576051|MGI:3699224 (PMID:16000322), (PMID:17206865)
RGD
PMID:16000322 PMID:17206865
NCBI chr 4:118,125,581...118,226,005
Ensembl chr 4:118,125,607...118,226,005
G
Alox5
arachidonate 5-lipoxygenase
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:6393219|PMID:24906289) GO_REF:0000024
Ensembl RGD UniProt
PMID:24906289
GO_REF:0000024 GO_REF:0000107 MGI:6393219
NCBI chr 4:149,531,329...149,578,696
Ensembl chr 4:149,531,515...149,578,743
G
Atat1
alpha tubulin acetyltransferase 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:23126280)
Ensembl RGD
PMID:23126280
GO_REF:0000107
NCBI chr20:2,844,595...2,857,809
Ensembl chr20:2,844,616...2,861,964
G
Dlk2
delta like non-canonical Notch ligand 2
involved_in
ISO IEA
(MGI:3709915|PMID:17320102) GO_REF:0000107
RGD Ensembl
PMID:17320102
GO_REF:0000107 MGI:3709915
NCBI chr 9:14,677,102...14,681,584
Ensembl chr 9:14,676,562...14,681,594
G
Gnb3
G protein subunit beta 3
involved_in
ISO
UniProtKB:Q61011 (PMID:29206867)
RGD
PMID:29206867
NCBI chr 4:157,639,468...157,645,171
Ensembl chr 4:157,639,469...157,645,173
G
Gps2
G protein pathway suppressor 2
involved_in
ISO
(MGI:6148392|PMID:24953653)
RGD
PMID:24953653
MGI:6148392
NCBI chr10:54,637,360...54,640,542
Ensembl chr10:54,637,455...54,640,650
G
Hdac6
histone deacetylase 6
acts_upstream_of_or_within
ISO
(PMID:23126280)
RGD
PMID:23126280
NCBI chr X:14,550,645...14,572,445
Ensembl chr X:14,551,044...14,572,441
G
Hes1
hes family bHLH transcription factor 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:15060169)
Ensembl RGD
PMID:15060169
GO_REF:0000107
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
G
Ift88
intraflagellar transport 88
acts_upstream_of_or_within
ISO
(PMID:19596798)
RGD
PMID:19596798
NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147
G
Lep
leptin
acts_upstream_of_or_within
ISO
MGI:2652843 (PMID:22927639)
RGD
PMID:22927639
NCBI chr 4:57,661,127...57,675,262
Ensembl chr 4:57,661,131...57,675,262
G
Lpin1
lipin 1
acts_upstream_of_or_within
ISO
MGI:1856603|MGI:1857584 (PMID:11138012)
RGD
PMID:11138012
NCBI chr 6:39,309,198...39,417,034
Ensembl chr 6:39,312,748...39,417,097
G
Mex3c
mex-3 RNA binding family member C
acts_upstream_of_or_within
ISO
MGI:104663|MGI:3764947 (PMID:22927639)
RGD
PMID:22927639
NCBI chr18:67,167,600...67,188,595
Ensembl chr18:67,166,718...67,188,595
G
Mir181a2
microRNA 181a-2
involved_in
ISO
UniProtKB:P23563 (PMID:24098322)
RGD
PMID:24098322
NCBI chr 3:22,615,845...22,615,961
Ensembl chr 3:22,615,845...22,615,961
G
Mir188
microRNA 188
acts_upstream_of_or_within
ISO
(PMID:25751060)
RGD
PMID:25751060
NCBI chr X:15,247,715...15,247,794
Ensembl chr X:15,247,715...15,247,794
G
Nr1d1
nuclear receptor subfamily 1, group D, member 1
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:3785131|PMID:18227153) GO_REF:0000024
Ensembl RGD UniProt
PMID:18227153
GO_REF:0000024 GO_REF:0000107 MGI:3785131
NCBI chr10:83,728,348...83,735,562
Ensembl chr10:83,728,318...83,735,705
G
Ppard
peroxisome proliferator-activated receptor delta
acts_upstream_of_or_within
ISO
MGI:2386684 (PMID:11756685)
RGD
PMID:11756685
NCBI chr20:6,298,785...6,363,970
Ensembl chr20:6,298,785...6,363,968
G
Pparg
peroxisome proliferator-activated receptor gamma
IDA
RGD
PMID:10438514
RGD:727277
NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468
G
Ptprq
protein tyrosine phosphatase, receptor type, Q
involved_in
ISS ISO
GO_REF:0000024 (PMID:19351528)
UniProt RGD
PMID:19351528
GO_REF:0000024
NCBI chr 7:42,834,455...43,016,807
Ensembl chr 7:42,837,109...43,016,917
G
Rorc
RAR-related orphan receptor C
involved_in
ISO
(MGI:5545969|PMID:21853531)
RGD
PMID:21853531
MGI:5545969
NCBI chr 2:182,009,707...182,034,910
Ensembl chr 2:182,009,286...182,034,907
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Sirt2
sirtuin 2
acts_upstream_of_or_within
ISO
(PMID:23126280)
RGD
PMID:23126280
NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975
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Taf8
TATA-box binding protein associated factor 8
acts_upstream_of_or_within
ISO
(PMID:14580349)
RGD
PMID:14580349
NCBI chr 9:13,491,892...13,511,713
Ensembl chr 9:13,491,937...13,511,717
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Tnf
tumor necrosis factor
involved_in
ISO
RNAcentral:URS0000248F3E_9823 (PMID:24098322)
RGD
PMID:24098322
NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
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Wnt10b
Wnt family member 10B
acts_upstream_of_or_within
ISO
MGI:3582610 (PMID:15673614)
RGD
PMID:15673614
NCBI chr 7:129,922,088...129,927,892
Ensembl chr 7:129,922,088...129,927,892
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Gata2
GATA binding protein 2
acts_upstream_of_or_within
ISO
MGI:4818492 (PMID:22991444)
RGD
PMID:22991444
NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
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Egr3
early growth response 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:21737317)
Ensembl RGD
PMID:21737317
GO_REF:0000107
NCBI chr15:45,150,335...45,156,052
Ensembl chr15:45,150,567...45,154,627
G
Rorc
RAR-related orphan receptor C
acts_upstream_of_or_within
ISO
(PMID:21737317)
RGD
PMID:21737317
NCBI chr 2:182,009,707...182,034,910
Ensembl chr 2:182,009,286...182,034,907
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Sox13
SRY-box transcription factor 13
acts_upstream_of_or_within
ISO
(PMID:21737317)
RGD
PMID:21737317
NCBI chr13:44,831,097...44,875,522
Ensembl chr13:44,831,085...44,875,762
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Tcf7
transcription factor 7
involved_in
ISO
(MGI:5486619|PMID:23562159)
RGD
PMID:23562159
MGI:5486619
NCBI chr10:36,423,443...36,454,350
Ensembl chr10:36,423,445...36,453,535
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Nf1
neurofibromin 1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:1857444 (PMID:12904481)
HGNC-UCL RGD
PMID:12904481
GO_REF:0000024
NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658
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Ezh2
enhancer of zeste 2 polycomb repressive complex 2 subunit
acts_upstream_of_or_within
ISO
MGI:2661097 (PMID:20798045)
RGD
PMID:20798045
NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
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Nf2
NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor
involved_in acts_upstream_of_or_within
IEA ISO IBA
GO_REF:0000118 MGI:1926955 (PMID:25433207) GO_REF:0000033
TreeGrafter RGD GO_Central
PMID:25433207
GO_REF:0000033 GO_REF:0000118
NCBI chr14:79,627,399...79,710,709
Ensembl chr14:79,627,399...79,710,667
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Rara
retinoic acid receptor, alpha
acts_upstream_of_or_within
ISO
MGI:1857622 (PMID:11222375)
RGD
PMID:11222375
NCBI chr10:83,883,490...83,928,932
Ensembl chr10:83,893,384...83,928,142
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Rbp1
retinol binding protein 1
acts_upstream_of_or_within
ISO
MGI:2181412 (PMID:11222375)
RGD
PMID:11222375
NCBI chr 8:99,025,218...99,046,740
Ensembl chr 8:99,025,206...99,046,743
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Eif2ak2
eukaryotic translation initiation factor 2-alpha kinase 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:5487705|PMID:23403623)
UniProt RGD
PMID:23403623
GO_REF:0000024 MGI:5487705
NCBI chr 6:16,189,000...16,224,972
Ensembl chr 6:16,188,979...16,224,971
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Fas
Fas cell surface death receptor
acts_upstream_of_or_within
ISO
MGI:1856334 (PMID:9697835)
RGD
PMID:9697835
NCBI chr 1:231,798,963...231,832,591
Ensembl chr 1:231,798,960...231,832,591
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Kdr
kinase insert domain receptor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:18772315)
Ensembl RGD
PMID:18772315
GO_REF:0000107
NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
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Pdcd2
programmed cell death 2
involved_in
ISO
(PMID:22922207)
RGD
PMID:22922207
NCBI chr 1:56,484,947...56,490,437
Ensembl chr 1:56,463,931...56,490,437
G
Rara
retinoic acid receptor, alpha
acts_upstream_of_or_within
ISO
MGI:1857622 (PMID:11222375)
RGD
PMID:11222375
NCBI chr10:83,883,490...83,928,932
Ensembl chr10:83,893,384...83,928,142
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Vegfa
vascular endothelial growth factor A
acts_upstream_of_or_within
ISO
(PMID:18772315)
RGD
PMID:18772315
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
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Cdk6
cyclin-dependent kinase 6
acts_upstream_of_or_within
ISO
MGI:3053975 (PMID:25342715)
RGD
PMID:25342715
NCBI chr 4:30,637,650...30,829,688
Ensembl chr 4:30,646,460...30,829,634
G
Eif2ak2
eukaryotic translation initiation factor 2-alpha kinase 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:5487705|PMID:23403623)
UniProt RGD
PMID:23403623
GO_REF:0000024 MGI:5487705
NCBI chr 6:16,189,000...16,224,972
Ensembl chr 6:16,188,979...16,224,971
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Kat5
lysine acetyltransferase 5
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:6508853|PMID:32542325)
UniProt Ensembl RGD
PMID:32542325
GO_REF:0000024 GO_REF:0000107 MGI:6508853
NCBI chr 1:202,895,751...202,903,178
Ensembl chr 1:202,895,751...202,903,458
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Prkdc
protein kinase, DNA-activated, catalytic subunit
involved_in
ISO
(MGI:6414739|PMID:32103174)
RGD
PMID:32103174
MGI:6414739
NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952
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Pus7
pseudouridine synthase 7
involved_in
ISO
(PMID:29628141)
RGD
PMID:29628141
NCBI chr 4:11,360,169...11,401,139
Ensembl chr 4:11,360,188...11,401,172
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Setd1a
SET domain containing 1A, histone lysine methyltransferase
involved_in
ISO
(PMID:27141965)
RGD
PMID:27141965
NCBI chr 1:182,386,197...182,411,695
Ensembl chr 1:182,388,060...182,411,090
G
Ythdf2
YTH N6-methyladenosine RNA binding protein F2
involved_in
ISO
(MGI:6316688|PMID:30065315), (MGI:6317061|PMID:30150673)
RGD
PMID:30065315 PMID:30150673
MGI:6316688 MGI:6317061
NCBI chr 5:144,381,426...144,407,126
Ensembl chr 5:144,381,431...144,408,144
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Atg7
autophagy related 7
involved_in
ISO
(MGI:4420830|PMID:20080761)
RGD
PMID:20080761
MGI:4420830
NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
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Gfi1b
growth factor independent 1B transcriptional repressor
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:11,940,232...11,952,989
Ensembl chr 3:11,940,233...11,952,942
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Mysm1
myb-like, SWIRM and MPN domains 1
involved_in
ISO
(PMID:26220525)
RGD
PMID:26220525
NCBI chr 5:109,761,345...109,826,652
Ensembl chr 5:109,776,286...109,819,967
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Ptn
pleiotrophin
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:5293574|PMID:21791434)
UniProt Ensembl RGD
PMID:21791434
GO_REF:0000024 GO_REF:0000107 MGI:5293574
NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456
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Tcim
transcriptional and immune response regulator
acts_upstream_of_or_within
ISO
(PMID:24937306)
RGD
PMID:24937306
NCBI chr16:67,595,762...67,597,055
Ensembl chr16:67,593,410...67,597,581
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Hey1
hes-related family bHLH transcription factor with YRPW motif 1
acts_upstream_of_or_within
ISO
MGI:104853|MGI:104876 (PMID:21300049)
RGD
PMID:21300049
NCBI chr 2:93,096,605...93,100,316
Ensembl chr 2:93,095,498...93,100,312
G
Hey2
hes-related family bHLH transcription factor with YRPW motif 2
acts_upstream_of_or_within
ISO
MGI:104654 (PMID:19154718)
RGD
PMID:19154718
NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
G
Mycl
MYCL proto-oncogene, bHLH transcription factor
acts_upstream_of_or_within
ISO
MGI:97357 (PMID:23022312)
RGD
PMID:23022312
NCBI chr 5:135,274,713...135,281,584
Ensembl chr 5:135,274,748...135,281,582
G
Mycn
MYCN proto-oncogene, bHLH transcription factor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:96799 (PMID:23022312)
Ensembl RGD
PMID:23022312
GO_REF:0000107
NCBI chr 6:35,717,764...35,723,590
Ensembl chr 6:35,717,764...35,723,590
G
Notch1
notch receptor 1
acts_upstream_of_or_within
ISO
MGI:3044585 (PMID:25535395)
RGD
PMID:25535395
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Esrp1
epithelial splicing regulatory protein 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:5915403|PMID:29107558)
UniProt RGD
PMID:29107558
GO_REF:0000024 MGI:5915403
NCBI chr 5:24,427,611...24,482,157
Ensembl chr 5:24,428,717...24,482,062
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Abca12
ATP binding cassette subfamily A member 12
involved_in
ISO
(PMID:19179616), (PMID:20869849) (MGI:4462766|PMID:20489143)
RGD
PMID:19179616 PMID:20489143 PMID:20869849
MGI:4462766
NCBI chr 9:72,822,661...72,995,748
Ensembl chr 9:72,823,350...72,996,049
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Cd109
CD109 molecule
acts_upstream_of_or_within
ISO
MGI:5443927 (PMID:22490868)
RGD
PMID:22490868
NCBI chr 8:79,454,480...79,569,195
Ensembl chr 8:79,454,480...79,569,194
G
Errfi1
ERBB receptor feedback inhibitor 1
involved_in
ISS IEA IBA ISO
GO_REF:0000024 GO_REF:0000118 GO_REF:0000033 GO_REF:0000107 (MGI:3629275|PMID:16648858)
UniProt TreeGrafter GO_Central Ensembl RGD
PMID:16648858
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:3629275
NCBI chr 5:161,323,981...161,337,289
Ensembl chr 5:161,323,998...161,337,282
G
Grhl1
grainyhead-like transcription factor 1
acts_upstream_of_or_within
ISO
MGI:3778923 (PMID:24586629)
RGD
PMID:24586629
NCBI chr 6:41,207,325...41,257,516
Ensembl chr 6:41,207,348...41,254,301
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Krt36
keratin 36
involved_in
ISO
(MGI:50776|PMID:1385239)
RGD
PMID:1385239
MGI:50776
NCBI chr10:85,036,379...85,040,003
Ensembl chr10:85,036,594...85,039,959
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Krt84
keratin 84
involved_in
ISO
(MGI:50776|PMID:1385239)
RGD
PMID:1385239
MGI:50776
NCBI chr 7:132,649,064...132,656,885
Ensembl chr 7:132,649,061...132,656,874
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Rock1
Rho-associated coiled-coil containing protein kinase 1
involved_in
ISO IEA
(PMID:19997641) GO_REF:0000107
RGD Ensembl
PMID:19997641
GO_REF:0000107
NCBI chr18:1,114,532...1,236,345
Ensembl chr18:1,115,905...1,235,571
G
Rock2
Rho-associated coiled-coil containing protein kinase 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:19997641)
Ensembl RGD
PMID:19997641
GO_REF:0000107
NCBI chr 6:39,679,116...39,774,033
Ensembl chr 6:39,679,082...39,774,031
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Sgpp1
sphingosine-1-phosphate phosphatase 1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:5503267|PMID:23637227)
UniProt Ensembl RGD
PMID:23637227
GO_REF:0000024 GO_REF:0000107 MGI:5503267
NCBI chr 6:94,425,339...94,446,534
Ensembl chr 6:94,425,339...94,446,534
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Tnk2
tyrosine kinase, non-receptor, 2
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
NCBI chr11:68,114,725...68,154,254
Ensembl chr11:68,114,726...68,154,009
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Zfp36
zinc finger protein 36
involved_in
ISS ISO
GO_REF:0000024 (PMID:27182009)
UniProt RGD
PMID:27182009
GO_REF:0000024
NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564
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Zfp36l1
zinc finger protein 36, C3H type-like 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:27182009)
UniProt RGD
PMID:27182009
GO_REF:0000024
NCBI chr 6:98,930,705...98,935,748
Ensembl chr 6:98,930,718...98,935,748
G
Bmpr1a
bone morphogenetic protein receptor type 1A
acts_upstream_of_or_within
ISO
MGI:95522 (PMID:16943278)
RGD
PMID:16943278
NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
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Fgfr1
Fibroblast growth factor receptor 1
acts_upstream_of_or_within
ISO
MGI:1338938 (PMID:16943278)
RGD
PMID:16943278
NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350
G
Cdkn1b
cyclin-dependent kinase inhibitor 1B
acts_upstream_of_or_within
ISO
MGI:104564 (PMID:9784491)
RGD
PMID:9784491
NCBI chr 4:167,760,067...167,765,177
Ensembl chr 4:167,760,181...167,764,982
G
Cdkn1c
cyclin-dependent kinase inhibitor 1C
acts_upstream_of_or_within
ISO
MGI:104565 (PMID:9784491)
RGD
PMID:9784491
NCBI chr 1:198,655,394...198,658,097
Ensembl chr 1:198,655,407...198,658,048
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Foxp1
forkhead box P1
acts_upstream_of_or_within
ISO
MGI:1344405|MGI:1921373 (PMID:22675208)
RGD
PMID:22675208
NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258
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Foxp4
forkhead box P4
acts_upstream_of_or_within
ISO
MGI:1344405|MGI:1914004 (PMID:22675208)
RGD
PMID:22675208
NCBI chr 9:13,058,506...13,115,406
Ensembl chr 9:13,058,476...13,114,879
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Ikzf3
IKAROS family zinc finger 3
involved_in
ISO
(MGI:87362|PMID:9155026)
RGD
PMID:9155026
MGI:87362
NCBI chr10:83,460,564...83,553,591
Ensembl chr10:83,465,745...83,553,591
G
Ndfip1
Nedd4 family interacting protein 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3695433 (PMID:17137798)
Ensembl RGD
PMID:17137798
GO_REF:0000107
NCBI chr18:30,265,808...30,316,068
Ensembl chr18:30,250,613...30,322,311
G
Rnf41
ring finger protein 41
acts_upstream_of_or_within
ISO
(PMID:18495327)
RGD
PMID:18495327
NCBI chr 7:838,160...876,869
Ensembl chr 7:838,203...865,511
G
Ankle1
ankyrin repeat and LEM domain containing 1
involved_in
ISO
(MGI:5800654|PMID:27010503)
RGD
PMID:27010503
MGI:5800654
NCBI chr16:18,076,413...18,082,356
Ensembl chr16:18,076,492...18,083,729
G
Qki
QKI, KH domain containing RNA binding
involved_in
IEA ISO
GO_REF:0000107 (PMID:27029405)
Ensembl RGD
PMID:27029405
GO_REF:0000107
NCBI chr 1:50,387,716...50,501,568
Ensembl chr 1:50,387,698...50,498,831
G
Tal1
TAL bHLH transcription factor 1, erythroid differentiation factor
acts_upstream_of_or_within
ISO
MGI:1858004|MGI:2450743 (PMID:17644741)
RGD
PMID:17644741
NCBI chr 5:128,586,776...128,600,976
Ensembl chr 5:128,587,701...128,600,976
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Cnot4
CCR4-NOT transcription complex, subunit 4
involved_in
ISO
(PMID:26575292)
RGD
PMID:26575292
NCBI chr 4:63,712,770...63,814,355
Ensembl chr 4:63,712,770...63,814,360
G
Eif6
eukaryotic translation initiation factor 6
involved_in
ISS ISO
GO_REF:0000024 (MGI:5780495|PMID:26391622)
UniProt RGD
PMID:26391622
GO_REF:0000024 MGI:5780495
NCBI chr 3:144,325,038...144,331,396
Ensembl chr 3:144,325,036...144,331,401
G
L3mbtl1
L3MBTL histone methyl-lysine binding protein 1
involved_in
ISO
(PMID:18474616)
RGD
PMID:18474616
NCBI chr 3:151,597,903...151,633,657
Ensembl chr 3:151,602,980...151,631,233
G
Lox
lysyl oxidase
acts_upstream_of_or_within
ISO
MGI:2657016 (PMID:21665949)
RGD
PMID:21665949
NCBI chr18:45,964,544...45,977,431
Ensembl chr18:45,967,343...46,041,477
G
Mef2c
myocyte enhancer factor 2C
involved_in
ISS ISO
GO_REF:0000024 (MGI:3844189|PMID:19211936)
UniProt RGD
PMID:19211936
GO_REF:0000024 MGI:3844189
NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
G
Prmt1
protein arginine methyltransferase 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:26575292)
UniProt RGD
PMID:26575292
GO_REF:0000024
NCBI chr 1:95,458,853...95,468,176
Ensembl chr 1:95,458,850...95,468,345
G
Rbm15
RNA binding motif protein 15
involved_in
ISO
(PMID:26575292)
RGD
PMID:26575292
NCBI chr 2:194,945,974...194,954,498
Ensembl chr 2:194,945,974...194,954,703
G
Gna11
G protein subunit alpha 11
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2682213 (PMID:15322542)
Ensembl RGD
PMID:15322542
GO_REF:0000107
NCBI chr 7:8,163,520...8,177,863
Ensembl chr 7:8,162,750...8,179,812
G
Gnaq
G protein subunit alpha q
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2681766 (PMID:15322542)
Ensembl RGD
PMID:15322542
GO_REF:0000107
NCBI chr 1:213,425,631...213,671,947
Ensembl chr 1:213,424,465...213,667,672
G
Bcl6
BCL6, transcription repressor
acts_upstream_of_or_within
ISO
MGI:2158436 (PMID:15240675)
RGD
PMID:15240675
NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389
G
Fzd1
frizzled class receptor 1
involved_in
ISO
(PMID:20039315)
RGD
PMID:20039315
NCBI chr 4:29,310,303...29,314,701
Ensembl chr 4:29,310,091...29,312,643 Ensembl chr 4:29,310,091...29,312,643
G
Mir21
microRNA 21
IMP
RGD
PMID:27798620
RGD:41404703
NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348
G
Pdgfra
platelet derived growth factor receptor alpha
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:21596750) GO_REF:0000024
Ensembl RGD UniProt
PMID:21596750
GO_REF:0000024 GO_REF:0000107
NCBI chr14:33,005,838...33,054,347
Ensembl chr14:33,005,839...33,054,335
G
Slc4a11
solute carrier family 4 member 11
involved_in
ISO
(MGI:6695689|PMID:33247189)
RGD
PMID:33247189
MGI:6695689
NCBI chr 3:117,900,223...117,912,787
Ensembl chr 3:117,900,223...117,912,674
G
Wnt3
Wnt family member 3
involved_in
ISO
(PMID:20039315)
RGD
PMID:20039315
NCBI chr10:88,680,198...88,724,170
Ensembl chr10:88,680,248...88,724,099
G
Wnt9b
Wnt family member 9B
acts_upstream_of_or_within
ISO
MGI:3526437 (PMID:16054034)
RGD
PMID:16054034
NCBI chr10:88,635,330...88,657,035
Ensembl chr10:88,635,331...88,657,035
G
Bmp4
bone morphogenetic protein 4
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1347470 (PMID:17881493)
Ensembl RGD
PMID:17881493
GO_REF:0000107
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Fat4
FAT atypical cadherin 4
acts_upstream_of_or_within
ISO
(PMID:23974041)
RGD
PMID:23974041
NCBI chr 2:121,927,266...122,056,700
Ensembl chr 2:121,927,942...122,056,707
G
Lif
LIF, interleukin 6 family cytokine
involved_in
ISO
(PMID:20624457)
RGD
PMID:20624457
NCBI chr14:79,131,049...79,140,486
Ensembl chr14:79,134,574...79,140,482
G
Pax2
paired box 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:3704067|PMID:17314325)
UniProt RGD
PMID:17314325
GO_REF:0000024 MGI:3704067
NCBI chr 1:243,616,509...243,697,454
Ensembl chr 1:243,616,606...243,695,321
G
Pax8
paired box 8
involved_in
ISS ISO
GO_REF:0000024 (MGI:3704067|PMID:17314325)
UniProt RGD
PMID:17314325
GO_REF:0000024 MGI:3704067
NCBI chr 3:7,185,721...7,242,363
Ensembl chr 3:7,185,723...7,242,363
G
Wwtr1
WW domain containing transcription regulator 1
acts_upstream_of_or_within
ISO
MGI:103262 (PMID:23974041)
RGD
PMID:23974041
NCBI chr 2:141,651,159...141,766,919
Ensembl chr 2:141,648,108...141,766,968
G
Yap1
Yes1 associated transcriptional regulator
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1917649 (PMID:23974041)
Ensembl RGD
PMID:23974041
GO_REF:0000107
NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010
G
Sfrp1
secreted frizzled-related protein 1
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:P97299 (MGI:5448935|PMID:22290867)
Ensembl RGD
PMID:22290867
GO_REF:0000107 MGI:5448935
NCBI chr16:68,575,763...68,614,180
Ensembl chr16:68,575,763...68,614,286
G
Sfrp2
secreted frizzled-related protein 2
involved_in
ISO
UniProtKB:Q8C4U3 (MGI:5448935|PMID:22290867)
RGD
PMID:22290867
MGI:5448935
NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063
G
Foxp1
forkhead box P1
involved_in
ISO
(PMID:15286807)
RGD
PMID:15286807
NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258
G
Akirin2
akirin 2
involved_in
ISO
(PMID:25686036), (PMID:28327665) (MGI:6304812|PMID:30801883)
RGD
PMID:25686036 PMID:28327665 PMID:30801883
MGI:6304812
NCBI chr 5:49,108,231...49,122,566
Ensembl chr 5:49,108,220...49,122,568
G
Camk1
calcium/calmodulin-dependent protein kinase I
involved_in
ISS ISO
GO_REF:0000024 (PMID:11114197)
UniProt RGD
PMID:11114197
GO_REF:0000024
NCBI chr 4:146,481,196...146,492,039
Ensembl chr 4:146,481,196...146,492,081
G
Ccnt2
cyclin T2
involved_in
ISO
(PMID:16331689)
RGD
PMID:16331689
NCBI chr13:39,251,573...39,293,172
Ensembl chr13:39,251,573...39,292,019
G
Cdk9
cyclin-dependent kinase 9
involved_in
ISO IEA
(PMID:12037670) GO_REF:0000107
RGD Ensembl
PMID:12037670
GO_REF:0000107
NCBI chr 3:15,996,467...16,001,315
Ensembl chr 3:15,996,468...16,002,410
G
Igf2
insulin-like growth factor 2
involved_in
ISS IEA IBA ISO
GO_REF:0000024 GO_REF:0000118 GO_REF:0000033 (MGI:5908341|PMID:16901893)
UniProt TreeGrafter GO_Central RGD
PMID:16901893
GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 MGI:5908341
NCBI chr 1:197,814,409...197,831,802
Ensembl chr 1:197,814,410...197,823,018
G
Megf10
multiple EGF-like domains 10
involved_in
ISO
(PMID:22101682)
RGD
PMID:22101682
NCBI chr18:50,605,231...50,755,441
Ensembl chr18:50,605,656...50,754,456
G
Or10j5
olfactory receptor family 10 subfamily J member 5
involved_in
ISO
(MGI:4415650|PMID:19922870)
RGD
PMID:19922870
MGI:4415650
NCBI chr13:85,430,655...85,431,584
Ensembl chr13:85,424,254...85,432,107
G
Supt6h
SPT6 homolog, histone chaperone and transcription elongation factor
involved_in
ISO
(MGI:5484727|PMID:23503590)
RGD
PMID:23503590
MGI:5484727
NCBI chr10:63,103,920...63,140,780
Ensembl chr10:63,103,921...63,140,780
G
Csf3r
colony stimulating factor 3 receptor
acts_upstream_of_or_within
ISO
MGI:97858 (PMID:23136256)
RGD
PMID:23136256
NCBI chr 5:138,298,605...138,318,224
Ensembl chr 5:138,301,506...138,317,881
G
Fas
Fas cell surface death receptor
acts_upstream_of_or_within
ISO
MGI:1856334 (PMID:9697835)
RGD
PMID:9697835
NCBI chr 1:231,798,963...231,832,591
Ensembl chr 1:231,798,960...231,832,591
G
Mafb
MAF bZIP transcription factor B
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:148,998,111...149,000,031
Ensembl chr 3:148,998,122...149,000,031
G
Rarg
retinoic acid receptor, gamma
acts_upstream_of_or_within
ISO
MGI:1339755 (PMID:23136256)
RGD
PMID:23136256
NCBI chr 7:133,367,833...133,390,301
Ensembl chr 7:133,367,833...133,390,177
G
Rnf41
ring finger protein 41
acts_upstream_of_or_within
ISO
(PMID:18495327)
RGD
PMID:18495327
NCBI chr 7:838,160...876,869
Ensembl chr 7:838,203...865,511
G
Tal1
TAL bHLH transcription factor 1, erythroid differentiation factor
acts_upstream_of_or_within
ISO
MGI:1858004|MGI:2450743 (PMID:16763211)
RGD
PMID:16763211
NCBI chr 5:128,586,776...128,600,976
Ensembl chr 5:128,587,701...128,600,976
G
Ndfip1
Nedd4 family interacting protein 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3695433 (PMID:17137798)
Ensembl RGD
PMID:17137798
GO_REF:0000107
NCBI chr18:30,265,808...30,316,068
Ensembl chr18:30,250,613...30,322,311
G
Ankle1
ankyrin repeat and LEM domain containing 1
involved_in
ISO
(MGI:5800654|PMID:27010503)
RGD
PMID:27010503
MGI:5800654
NCBI chr16:18,076,413...18,082,356
Ensembl chr16:18,076,492...18,083,729
G
Spi1
Spi-1 proto-oncogene
involved_in
ISO
(MGI:6508505|PMID:25252941)
RGD
PMID:25252941
MGI:6508505
NCBI chr 3:77,059,744...77,093,730
Ensembl chr 3:77,073,012...77,092,393
G
Capn3
calpain 3
involved_in
IEA ISO
GO_REF:0000107 (MGI:5306562|PMID:20139084)
Ensembl RGD
PMID:20139084
GO_REF:0000107 MGI:5306562
NCBI chr 3:107,407,518...107,457,858
Ensembl chr 3:107,407,850...107,457,858
G
Cd53
Cd53 molecule
NOT|involved_in
ISO
(MGI:5526919|PMID:22847234)
RGD
PMID:22847234
MGI:5526919
NCBI chr 2:194,352,139...194,399,668
Ensembl chr 2:194,352,139...194,399,657
G
Flot2
flotillin 2
involved_in
ISO IBA IEA
(PMID:25105415) GO_REF:0000033 GO_REF:0000118 GO_REF:0000107 (MGI:5634873|PMID:25105415)
RGD GO_Central TreeGrafter Ensembl
PMID:25105415
GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 MGI:5634873
NCBI chr10:62,926,047...62,947,759
Ensembl chr10:62,920,665...62,947,756
G
Klhl41
kelch-like family member 41
involved_in
ISS IBA ISO
GO_REF:0000024 GO_REF:0000033 (MGI:5487520|PMID:21368295)
UniProt GO_Central RGD
PMID:21368295
GO_REF:0000024 GO_REF:0000033 MGI:5487520
NCBI chr 3:54,434,291...54,447,415
Ensembl chr 3:54,434,234...54,449,222
G
Myocd
myocardin
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:12640126)
Ensembl RGD
PMID:12640126
GO_REF:0000107
NCBI chr10:49,833,219...49,928,806
Ensembl chr10:49,836,641...49,927,627
G
Trip4
thyroid hormone receptor interactor 4
involved_in
ISO
(MGI:5779448|PMID:27008887)
RGD
PMID:27008887
MGI:5779448
NCBI chr 8:66,351,861...66,439,679
Ensembl chr 8:66,353,248...66,439,774
G
Zfp36l1
zinc finger protein 36, C3H type-like 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:5784987|PMID:17889962)
UniProt RGD
PMID:17889962
GO_REF:0000024 MGI:5784987
NCBI chr 6:98,930,705...98,935,748
Ensembl chr 6:98,930,718...98,935,748
G
Fosl2
FOS like 2, AP-1 transcription factor subunit
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3757560 (PMID:31135379)
Ensembl RGD
PMID:31135379
GO_REF:0000107
NCBI chr 6:24,297,898...24,319,219
Ensembl chr 6:24,300,956...24,320,034
G
Dmpk
DM1 protein kinase
involved_in
ISO
(MGI:3806406|PMID:18729234)
RGD
PMID:18729234
MGI:3806406
NCBI chr 1:78,730,255...78,740,585
Ensembl chr 1:78,730,275...78,740,593
G
Fbxo22
F-box protein 22
acts_upstream_of_or_within
ISO
(PMID:19319192)
RGD
PMID:19319192
NCBI chr 8:55,579,906...55,595,981
Ensembl chr 8:55,579,891...55,596,148
G
Hdac5
histone deacetylase 5
involved_in
ISO
(MGI:3712602|PMID:17468767)
RGD
PMID:17468767
MGI:3712602
NCBI chr10:87,152,978...87,187,921
Ensembl chr10:87,152,978...87,188,235
G
Rbm24
RNA binding motif protein 24
involved_in
ISO
(MGI:4999688|PMID:20977548)
RGD
PMID:20977548
MGI:4999688
NCBI chr17:18,275,681...18,288,231
Ensembl chr17:18,275,688...18,288,102
G
Rbm38
RNA binding motif protein 38
involved_in
ISO
(MGI:4438547|PMID:19817877)
RGD
PMID:19817877
MGI:4438547
NCBI chr 3:161,801,577...161,814,381
Ensembl chr 3:161,801,577...161,814,381
G
Sik1
salt-inducible kinase 1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:3712602|PMID:17468767)
UniProt Ensembl RGD
PMID:17468767
GO_REF:0000024 GO_REF:0000107 MGI:3712602
NCBI chr20:9,949,407...9,959,036
Ensembl chr20:9,947,396...9,958,991
G
Lgals9
galectin 9
involved_in
ISO
(MGI:5491117|PMID:23408620)
RGD
PMID:23408620
MGI:5491117
NCBI chr10:63,907,018...63,930,224
Ensembl chr10:63,907,018...63,930,045
G
Prdm1
PR/SET domain 1
involved_in
ISO
(MGI:5779429|PMID:27102484)
RGD
PMID:27102484
MGI:5779429
NCBI chr20:47,959,858...47,981,488
Ensembl chr20:47,959,858...47,981,488
G
Zfp683
zinc finger protein 683
involved_in
ISO
(MGI:5779429|PMID:27102484)
RGD
PMID:27102484
MGI:5779429
NCBI chr 5:146,277,972...146,285,856
Ensembl chr 5:146,278,978...146,285,000
G
Zfp683
zinc finger protein 683
involved_in
ISO
(MGI:5437828|PMID:22885984)
RGD
PMID:22885984
MGI:5437828
NCBI chr 5:146,277,972...146,285,856
Ensembl chr 5:146,278,978...146,285,000
G
Ctnnb1
catenin beta 1
involved_in
ISO IEA
(MGI:3822373|PMID:19112489) GO_REF:0000107
RGD Ensembl
PMID:19112489
GO_REF:0000107 MGI:3822373
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
G
Gata3
GATA binding protein 3
involved_in
ISO
(MGI:3822373|PMID:19112489)
RGD
PMID:19112489
MGI:3822373
NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
G
Bmpr1a
bone morphogenetic protein receptor type 1A
NOT|involved_in
ISO
(MGI:3040576|PMID:15073157)
RGD
PMID:15073157
MGI:3040576
NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
G
Bmpr1a
bone morphogenetic protein receptor type 1A
NOT|involved_in
ISO
(MGI:3040576|PMID:15073157)
RGD
PMID:15073157
MGI:3040576
NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
G
Anxa2
annexin A2
involved_in
ISO IEA
(MGI:5469743|PMID:23415230) GO_REF:0000107
RGD Ensembl
PMID:23415230
GO_REF:0000107 MGI:5469743
NCBI chr 8:70,105,268...70,141,663
Ensembl chr 8:70,105,253...70,141,658
G
Ascl1
achaete-scute family bHLH transcription factor 1
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:1857470 (PMID:20144606), (PMID:22991444)
GO_Central RGD
PMID:20144606 PMID:22991444
GO_REF:0000033
NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993
G
Ascl2
achaete-scute family bHLH transcription factor 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:198,148,999...198,151,406
Ensembl chr 1:198,148,999...198,151,406
G
Bhlhe40
basic helix-loop-helix family, member e40
involved_in
IBA IEA
GO_REF:0000033 GO_REF:0000118
GO_Central TreeGrafter
GO_REF:0000033 GO_REF:0000118
NCBI chr 4:141,618,453...141,624,154
Ensembl chr 4:141,618,476...141,624,774
G
Bhlhe41
basic helix-loop-helix family, member e41
involved_in
IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr 4:178,834,264...178,838,618
Ensembl chr 4:178,834,271...178,838,468
G
Bmal1
basic helix-loop-helix ARNT like 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:5553036|PMID:24268780)
UniProt RGD
PMID:24268780
GO_REF:0000024 MGI:5553036
NCBI chr 1:167,331,756...167,430,235
Ensembl chr 1:167,331,633...167,430,231
G
Chd7
chromodomain helicase DNA binding protein 7
acts_upstream_of_or_within
ISO
MGI:3707678 (PMID:19279158)
RGD
PMID:19279158
NCBI chr 5:21,812,007...21,995,358
Ensembl chr 5:21,812,070...21,995,358
G
Dicer1
dicer 1 ribonuclease III
acts_upstream_of_or_within
ISO
(PMID:18184563)
RGD
PMID:18184563
NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
G
Dll1
delta like canonical Notch ligand 1
involved_in acts_upstream_of_or_within
ISS ISO IEA
GO_REF:0000024 MGI:1861919 (PMID:19389377) (MGI:3823133|PMID:18997111) GO_REF:0000107
UniProt RGD Ensembl
PMID:18997111 PMID:19389377
GO_REF:0000024 GO_REF:0000107 MGI:3823133
NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
G
Dll4
delta like canonical Notch ligand 4
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3056400 (PMID:19389377)
Ensembl RGD
PMID:19389377
GO_REF:0000107
NCBI chr 3:106,317,114...106,327,004
Ensembl chr 3:106,316,986...106,326,931
G
Dock7
dedicator of cytokinesis 7
involved_in
ISO
(MGI:5447899|PMID:22842144)
RGD
PMID:22842144
MGI:5447899
NCBI chr 5:113,599,371...113,782,871
Ensembl chr 5:113,600,198...113,782,813
G
Ezh2
enhancer of zeste 2 polycomb repressive complex 2 subunit
acts_upstream_of_or_within
ISO
MGI:2661097 (PMID:20798045)
RGD
PMID:20798045
NCBI chr 4:76,624,399...76,687,362
Ensembl chr 4:76,624,399...76,687,362
G
Ferd3l
Fer3-like bHLH transcription factor
acts_upstream_of_or_within
ISO
MGI:4460989 (PMID:20460368)
RGD
PMID:20460368
NCBI chr 6:50,645,379...50,646,268
Ensembl chr 6:50,645,379...50,646,268
G
Fezf1
Fez family zinc finger 1
involved_in
ISO
UniProtKB:Q9VQ56 (MGI:5905549|PMID:20152183)
RGD
PMID:20152183
MGI:5905549
NCBI chr 4:51,762,751...51,766,078
Ensembl chr 4:51,762,751...51,766,078
G
Fezf2
Fez family zinc finger 2
involved_in
ISO
UniProtKB:Q9VQ56 (MGI:5905549|PMID:20152183)
RGD
PMID:20152183
MGI:5905549
NCBI chr15:12,768,614...12,777,554
Ensembl chr15:12,773,762...12,777,554
G
Fxr1
FMR1 autosomal homolog 1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:5904238|PMID:28204491)
UniProt Ensembl RGD
PMID:28204491
GO_REF:0000024 GO_REF:0000107 MGI:5904238
NCBI chr 2:116,884,167...116,937,590
Ensembl chr 2:116,884,248...116,937,590
G
Helt
helt bHLH transcription factor
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr16:45,991,227...45,993,045
Ensembl chr16:45,991,227...45,992,960
G
Hes1
hes family bHLH transcription factor 1
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:104876|MGI:104877 (PMID:10804175), (PMID:19050759)
GO_Central RGD
PMID:10804175 PMID:19050759
GO_REF:0000033
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
G
Hes2
hes family bHLH transcription factor 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:162,667,190...162,668,235
Ensembl chr 5:162,667,190...162,668,235
G
Hes3
hes family bHLH transcription factor 3
involved_in acts_upstream_of_or_within
IEA ISO IBA
GO_REF:0000118 MGI:104853|MGI:104876 (PMID:19050759) GO_REF:0000033
TreeGrafter RGD GO_Central
PMID:19050759
GO_REF:0000033 GO_REF:0000118
NCBI chr 5:162,793,611...162,799,578
Ensembl chr 5:162,794,367...162,796,261
G
Hes5
hes family bHLH transcription factor 5
involved_in acts_upstream_of_or_within
ISS ISO IBA
GO_REF:0000024 MGI:104853|MGI:104877 (PMID:10804175), (PMID:19050759) GO_REF:0000033
UniProt RGD GO_Central
PMID:10804175 PMID:19050759
GO_REF:0000024 GO_REF:0000033
NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001
G
Hes6
hes family bHLH transcription factor 6
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 9:92,001,849...92,003,562
Ensembl chr 9:92,001,841...92,003,559
G
Hes7
hes family bHLH transcription factor 7
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:53,824,124...53,828,934
Ensembl chr10:53,825,574...53,828,097
G
Hey1
hes-related family bHLH transcription factor with YRPW motif 1
involved_in
IEA
GO_REF:0000118
TreeGrafter
GO_REF:0000118
NCBI chr 2:93,096,605...93,100,316
Ensembl chr 2:93,095,498...93,100,312
G
Hey2
hes-related family bHLH transcription factor with YRPW motif 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
G
Heyl
hes-related family bHLH transcription factor with YRPW motif-like
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:135,508,160...135,525,152
Ensembl chr 5:135,508,160...135,525,152
G
Hltf
helicase-like transcription factor
involved_in
ISO
(MGI:5469743|PMID:23415230)
RGD
PMID:23415230
MGI:5469743
NCBI chr 2:102,549,724...102,609,492
Ensembl chr 2:102,549,724...102,609,327
G
Hmgb2
high mobility group box 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:5568800|PMID:24391977)
AgBase RGD
PMID:24391977
GO_REF:0000024 MGI:5568800
NCBI chr16:32,710,651...32,713,230
Ensembl chr16:32,710,658...32,713,140
G
Hmgb2l1
high mobility group box 2-like 1
involved_in
ISS
GO_REF:0000024
AgBase
GO_REF:0000024
NCBI chr11:47,252,583...47,253,646
Ensembl chr11:47,252,569...47,253,669
G
Hmgb2l2
high mobility group box 2 like 2
involved_in
ISS
GO_REF:0000024
AgBase
GO_REF:0000024
NCBI chr14:69,045,590...69,046,623
Ensembl chr14:69,045,641...69,046,640
G
Hoxb3
homeo box B3
acts_upstream_of_or_within
ISO
(PMID:21320481)
RGD
PMID:21320481
NCBI chr10:81,258,739...81,314,134
Ensembl chr10:81,299,357...81,313,107
G
Il1b
interleukin 1 beta
involved_in
IGI
PMID:20018408
ARUK-UCL
PMID:20018408
RGD:9491804
NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
G
Jade2
jade family PHD finger 2
acts_upstream_of_or_within
ISO
MGI:1196256 (PMID:25018020)
RGD
PMID:25018020
NCBI chr10:36,075,239...36,124,210
Ensembl chr10:36,078,917...36,116,984
G
Kdm1a
lysine demethylase 1A
acts_upstream_of_or_within
ISO
MGI:1924151 (PMID:25018020)
RGD
PMID:25018020
NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319
G
Nf2
NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor
acts_upstream_of_or_within
ISO
MGI:1926955 (PMID:25433207)
RGD
PMID:25433207
NCBI chr14:79,627,399...79,710,709
Ensembl chr14:79,627,399...79,710,667
G
Nos1
nitric oxide synthase 1
involved_in
ISO
(MGI:5619742|PMID:21960957)
RGD
PMID:21960957
MGI:5619742
NCBI chr12:38,615,111...38,795,492
Ensembl chr12:38,626,714...38,710,945
G
Notch1
notch receptor 1
acts_upstream_of_or_within
ISO
MGI:1857230 (PMID:9102301)
RGD
PMID:9102301
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Pax6
paired box 6
acts_upstream_of_or_within
IMP ISO
MGI:3521718 (PMID:15548580)
RGD
PMID:15548580 PMID:16164600
RGD:1601222
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
G
Per2
period circadian regulator 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:5553036|PMID:24268780)
UniProt RGD
PMID:24268780
GO_REF:0000024 MGI:5553036
NCBI chr 9:92,007,289...92,049,551
Ensembl chr 9:92,007,296...92,049,459
G
Pou4f1
POU class 4 homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2387665 (PMID:19877281)
Ensembl RGD
PMID:19877281
GO_REF:0000107
NCBI chr15:81,253,714...81,260,057
Ensembl chr15:81,257,781...81,259,728
G
Prune1
prune exopolyphosphatase 1
involved_in
ISO
(PMID:28334956)
RGD
PMID:28334956
NCBI chr 2:182,830,575...182,859,972
Ensembl chr 2:182,830,578...182,859,336
G
S100a10
S100 calcium binding protein A10
involved_in
ISO
(MGI:5469743|PMID:23415230)
RGD
PMID:23415230
MGI:5469743
NCBI chr 2:179,221,012...179,229,659
Ensembl chr 2:179,220,887...179,229,661
G
Sox2
SRY-box transcription factor 2
acts_upstream_of_or_within
ISO
MGI:102780|MGI:109344|MGI:1915344|MGI:88192 (PMID:22513373)
RGD
PMID:22513373
NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338
G
Wnt3
Wnt family member 3
involved_in
ISO
(PMID:25640183)
RGD
PMID:25640183
NCBI chr10:88,680,198...88,724,170
Ensembl chr10:88,680,248...88,724,099
G
Yap1
Yes1 associated transcriptional regulator
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:25433207) GO_REF:0000107
RGD Ensembl
PMID:25433207
GO_REF:0000107
NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010
G
Ythdf2
YTH N6-methyladenosine RNA binding protein F2
involved_in
ISO
(PMID:32169943) (MGI:6316439|PMID:29855337)
RGD
PMID:29855337 PMID:32169943
MGI:6316439
NCBI chr 5:144,381,426...144,407,126
Ensembl chr 5:144,381,431...144,408,144
G
Zfp335
zinc finger protein 335
acts_upstream_of_or_within
ISO
MGI:5470136 (PMID:23178126)
RGD
PMID:23178126
NCBI chr 3:153,618,587...153,648,213
Ensembl chr 3:153,627,467...153,647,054
G
Alk
ALK receptor tyrosine kinase
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 6:22,879,653...23,599,636
Ensembl chr 6:22,880,625...23,598,034
G
Atn1
atrophin 1
IMP
RGD
PMID:12812981
RGD:1304391
NCBI chr 4:157,554,287...157,568,092
Ensembl chr 4:157,551,276...157,568,132
G
Atoh1
atonal bHLH transcription factor 1
acts_upstream_of_or_within
ISO
(PMID:14757642)
RGD
PMID:14757642
NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154
G
Barhl2
BarH-like homeobox 2
TAS
RGD
PMID:9698441
RGD:632026
NCBI chr14:3,340,465...3,345,362
Ensembl chr14:3,340,465...3,345,353
G
Bcl11b
BCL11 transcription factor B
acts_upstream_of_or_within
ISO
(PMID:21752992)
RGD
PMID:21752992
NCBI chr 6:126,834,531...126,927,720
Ensembl chr 6:126,834,531...126,928,224
G
Bdnf
brain-derived neurotrophic factor
involved_in
IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central
GO_REF:0000033 GO_REF:0000118
NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
G
Bin1
bridging integrator 1
involved_in
IEA ISS ISO
GO_REF:0000107 GO_REF:0000024 (PMID:10412034)
Ensembl Alzheimers_University_of_Toronto RGD
PMID:10412034
GO_REF:0000024 GO_REF:0000107
NCBI chr18:24,009,731...24,067,267
Ensembl chr18:24,009,653...24,067,263
G
Casz1
castor zinc finger 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:159,243,965...159,393,935
Ensembl chr 5:159,243,995...159,393,400
G
Ccnd2
cyclin D2
IEP
RGD
PMID:8028782
RGD:2289187
NCBI chr 4:159,966,883...159,989,261
Ensembl chr 4:159,962,363...159,989,495
G
Cdon
cell adhesion associated, oncogene regulated
acts_upstream_of_or_within
ISO
MGI:2653120 (PMID:16648472)
RGD
PMID:16648472
NCBI chr 8:33,775,123...33,861,635
Ensembl chr 8:33,806,183...33,859,033
G
Dicer1
dicer 1 ribonuclease III
acts_upstream_of_or_within
ISO
MGI:3641051 (PMID:17761882), (PMID:18997113)
RGD
PMID:17761882 PMID:18997113
NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
G
Dpysl2
dihydropyrimidinase-like 2
IMP
RGD
PMID:18218617
RGD:2316246
NCBI chr15:41,005,551...41,111,724
Ensembl chr15:41,005,551...41,111,829
G
Efna3
ephrin A3
IDA
RGD
PMID:10954848
RGD:634739
NCBI chr 2:174,729,192...174,738,111
Ensembl chr 2:174,729,764...174,738,736
G
Eya1
EYA transcriptional coactivator and phosphatase 1
acts_upstream_of_or_within
ISO
MGI:102780|MGI:107754|MGI:1339708|MGI:2150426|MGI:98364 (PMID:15496442), (PMID:22513373)
RGD
PMID:15496442 PMID:22513373
NCBI chr 5:4,863,501...5,101,483
Ensembl chr 5:4,955,543...5,101,483
G
Fgf20
fibroblast growth factor 20
involved_in
ISO
(MGI:5424107|PMID:22235191)
RGD
PMID:22235191
MGI:5424107
NCBI chr16:52,030,549...52,038,201
Ensembl chr16:52,010,194...52,038,204
G
Hes1
hes family bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:104876 (PMID:10804175)
RGD
PMID:10804175
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
G
Hes5
hes family bHLH transcription factor 5
acts_upstream_of_or_within
ISO
MGI:104853 (PMID:10804175)
RGD
PMID:10804175
NCBI chr 5:165,522,138...165,523,684
Ensembl chr 5:165,522,234...165,523,001
G
Id2
inhibitor of DNA binding 2
acts_upstream_of_negative_effect
ISS ISO
GO_REF:0000024 (MGI:4821067|PMID:17681138)
UniProt RGD
PMID:17681138
GO_REF:0000024 MGI:4821067
NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400
G
Ltk
leukocyte receptor tyrosine kinase
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:106,734,675...106,741,552
Ensembl chr 3:106,734,676...106,743,369
G
Mapk8
mitogen-activated protein kinase 8
IMP
RGD
PMID:24388750
RGD:10047173
NCBI chr16:8,638,897...8,721,960
Ensembl chr16:8,638,924...8,721,981
G
Mettl14
methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit
involved_in
ISO
(MGI:6390707|PMID:31340148)
RGD
PMID:31340148
MGI:6390707
NCBI chr 2:211,530,598...211,546,845
Ensembl chr 2:211,530,602...211,546,821
G
Mir9-3
microRNA 9-3
acts_upstream_of_or_within
ISO
MGI:2676911|MGI:3619442 (PMID:18842901)
RGD
PMID:18842901
NCBI chr 1:133,440,049...133,440,138
G
Mosmo
modulator of smoothened
involved_in
ISO
(MGI:6111022|PMID:29290584)
RGD
PMID:29290584
MGI:6111022
NCBI chr 1:175,217,680...175,288,521
Ensembl chr 1:175,217,545...175,288,334
G
Neurod1
neuronal differentiation 1
acts_upstream_of_or_within
ISO
MGI:102780|MGI:107754|MGI:109344 (PMID:22513373)
RGD
PMID:22513373
NCBI chr 3:64,359,554...64,363,526
Ensembl chr 3:64,359,395...64,363,649
G
Neurog1
neurogenin 1
acts_upstream_of_or_within
ISO
MGI:102780|MGI:109344|MGI:1339708 (PMID:22513373)
RGD
PMID:22513373
NCBI chr17:8,362,878...8,364,397
Ensembl chr17:8,362,821...8,364,571
G
Nf1
neurofibromin 1
IMP
RGD
PMID:18218617
RGD:2316246
NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658
G
Ngf
nerve growth factor
involved_in acts_upstream_of_or_within
IEA ISO IBA
GO_REF:0000118 (PMID:16516892) GO_REF:0000033
TreeGrafter RGD GO_Central
PMID:16516892
GO_REF:0000033 GO_REF:0000118
NCBI chr 2:189,901,058...189,954,452
Ensembl chr 2:189,901,058...189,954,452
G
Nlgn1
neuroligin 1
involved_in
ISO IEA ISS
(MGI:3694190|PMID:10892652) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:10892652
GO_REF:0000024 GO_REF:0000107 MGI:3694190
NCBI chr 2:108,256,236...109,181,530
Ensembl chr 2:108,257,824...109,002,464
G
Nrep
neuronal regeneration related protein
involved_in
IMP IBA
GO_REF:0000033
GO_Central RGD
PMID:15485502
GO_REF:0000033, RGD:1540387
NCBI chr18:25,017,069...25,046,593
Ensembl chr18:25,017,083...25,046,591
G
Ntf3
neurotrophin 3
involved_in
IBA IEA
GO_REF:0000033 GO_REF:0000118
GO_Central TreeGrafter
GO_REF:0000033 GO_REF:0000118
NCBI chr 4:158,914,984...158,984,453
Ensembl chr 4:158,914,957...158,984,596
G
Ntf4
neurotrophin 4
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:95,893,560...95,896,391
Ensembl chr 1:95,893,457...95,897,243
G
Numb
NUMB, endocytic adaptor protein
IMP
RGD
PMID:8805372
RGD:2302415
NCBI chr 6:103,431,400...103,553,422
Ensembl chr 6:103,431,400...103,553,354
G
Pax6
paired box 6
acts_upstream_of_or_within
IDA ISO
MGI:3521718 (PMID:15548580)
RGD
PMID:15548580 PMID:11880342
RGD:729590
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
G
Rock1
Rho-associated coiled-coil containing protein kinase 1
involved_in
ISO IEA
UniProtKB:O60890 (PMID:27160703) GO_REF:0000107
RGD Ensembl
PMID:27160703
GO_REF:0000107
NCBI chr18:1,114,532...1,236,345
Ensembl chr18:1,115,905...1,235,571
G
S1pr5
sphingosine-1-phosphate receptor 5
IEP
RGD
PMID:12617946
RGD:1299278
NCBI chr 8:19,786,676...19,791,862
Ensembl chr 8:19,786,663...19,791,795
G
Six1
SIX homeobox 1
acts_upstream_of_or_within
ISO
MGI:107754|MGI:109344|MGI:1339708|MGI:2655195|MGI:98364 (PMID:15496442), (PMID:22513373)
RGD
PMID:15496442 PMID:22513373
NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975
G
Tfap2a
transcription factor AP-2 alpha
acts_upstream_of_or_within
ISO
MGI:1888387 (PMID:10842061)
RGD
PMID:10842061
NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507
G
Timp2
TIMP metallopeptidase inhibitor 2
acts_upstream_of_or_within
ISO
(PMID:15901773)
RGD
PMID:15901773
NCBI chr10:103,541,199...103,590,611
Ensembl chr10:103,531,505...103,590,611
G
Wdr62
WD repeat domain 62
IMP
RGD
PMID:24388750
RGD:10047173
NCBI chr 1:85,491,531...85,530,643
Ensembl chr 1:85,491,533...85,530,637
G
Ywhag
tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma
involved_in
ISS ISO
GO_REF:0000024 (PMID:11824616)
UniProt RGD
PMID:11824616
GO_REF:0000024
NCBI chr12:20,744,500...20,772,828
Ensembl chr12:20,744,535...20,772,827
G
Zfhx2
zinc finger homeobox 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr15:28,533,155...28,565,667
Ensembl chr15:28,533,156...28,565,128
G
Zfhx3
zinc finger homeobox 3
involved_in
IEP IBA
GO_REF:0000033
GO_Central RGD
PMID:16251211
GO_REF:0000033, RGD:1625359
NCBI chr19:36,257,196...36,886,104
Ensembl chr19:36,630,254...36,881,771
G
Lrrk2
leucine-rich repeat kinase 2
involved_in
ISO
(PMID:21168496)
RGD
PMID:21168496
NCBI chr 7:122,826,696...122,987,711
Ensembl chr 7:122,826,696...122,987,703
G
Mir132
microRNA 132
acts_upstream_of_or_within
ISO
MGI:2676888 (PMID:21059906)
RGD
PMID:21059906
NCBI chr10:60,023,696...60,023,796
Ensembl chr10:60,023,696...60,023,796
G
Mir212
microRNA 212
acts_upstream_of_or_within
ISO
MGI:2676817 (PMID:21059906)
RGD
PMID:21059906
NCBI chr10:60,023,403...60,023,513
Ensembl chr10:60,023,403...60,023,513
G
Rac1
Rac family small GTPase 1
acts_upstream_of_or_within
ISO
MGI:2180784 (PMID:23258346)
RGD
PMID:23258346
NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
G
Rac3
Rac family small GTPase 3
acts_upstream_of_or_within
ISO
MGI:97845 (PMID:23258346)
RGD
PMID:23258346
NCBI chr10:106,002,808...106,005,243
Ensembl chr10:105,993,087...106,005,260
G
Prdm1
PR/SET domain 1
involved_in
ISO
(MGI:5779429|PMID:27102484)
RGD
PMID:27102484
MGI:5779429
NCBI chr20:47,959,858...47,981,488
Ensembl chr20:47,959,858...47,981,488
G
Zfp683
zinc finger protein 683
involved_in
ISO
(MGI:5779429|PMID:27102484)
RGD
PMID:27102484
MGI:5779429
NCBI chr 5:146,277,972...146,285,856
Ensembl chr 5:146,278,978...146,285,000
G
Cebpb
CCAAT/enhancer binding protein beta
involved_in
IDA
PMID:15308669
UniProt
PMID:15308669
RGD:1599801
NCBI chr 3:156,398,035...156,399,466
Ensembl chr 3:156,397,052...156,399,473
G
Dspp
dentin sialophosphoprotein
involved_in
IDA
PMID:15308669
UniProt
PMID:15308669
RGD:1599801
NCBI chr14:5,565,562...5,571,669
Ensembl chr14:5,565,629...5,571,672
G
Nfe2l1
NFE2 like bZIP transcription factor 1
involved_in
ISO
(PMID:15308669)
RGD
PMID:15308669
NCBI chr10:81,796,055...81,812,926
Ensembl chr10:81,800,366...81,832,318
G
Dicer1
dicer 1 ribonuclease III
acts_upstream_of_or_within
ISO
(PMID:20223197)
RGD
PMID:20223197
NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
G
Dusp15
dual specificity phosphatase 15
involved_in
ISO IEA
(MGI:5897548|PMID:22792334) GO_REF:0000107
RGD Ensembl
PMID:22792334
GO_REF:0000107 MGI:5897548
NCBI chr 3:141,408,495...141,419,137
Ensembl chr 3:141,408,498...141,418,999
G
Opalin
oligodendrocytic myelin paranodal and inner loop protein
involved_in
ISO
(MGI:6307357|PMID:30837646)
RGD
PMID:30837646
MGI:6307357
NCBI chr 1:239,891,137...239,909,388
Ensembl chr 1:239,891,142...239,908,788
G
Slc45a3
solute carrier family 45, member 3
involved_in
ISO
(MGI:5464987|PMID:22521588)
RGD
PMID:22521588
MGI:5464987
NCBI chr13:43,407,293...43,427,588
Ensembl chr13:43,407,293...43,427,588
G
Sox1
SRY-box transcription factor 1
involved_in
ISO
(MGI:4414895|PMID:19723505)
RGD
PMID:19723505
MGI:4414895
NCBI chr16:77,135,577...77,139,592
Ensembl chr16:77,137,584...77,138,762
G
Tcf7l2
transcription factor 7 like 2
acts_upstream_of_or_within
ISO
(PMID:19503085)
RGD
PMID:19503085
NCBI chr 1:254,785,956...254,978,967
Ensembl chr 1:254,786,091...254,978,967
G
Tnfrsf21
TNF receptor superfamily member 21
involved_in
ISS ISO
GO_REF:0000024 (MGI:5545972|PMID:21725297)
UniProt RGD
PMID:21725297
GO_REF:0000024 MGI:5545972
NCBI chr 9:17,879,156...17,954,085
Ensembl chr 9:17,879,156...17,954,085
G
Wdr1
WD repeat domain 1
acts_upstream_of_or_within
IDA
PMID:20631256
MGI
PMID:20631256
RGD:8693352
NCBI chr14:72,258,032...72,291,768
Ensembl chr14:72,257,956...72,291,766
G
Apc
APC regulator of WNT signaling pathway
acts_upstream_of_or_within
ISO
MGI:1857966 (PMID:15802266)
RGD
PMID:15802266
NCBI chr18:25,828,558...25,925,511
Ensembl chr18:25,864,222...25,922,696
G
Atf4
activating transcription factor 4
involved_in
ISS ISO
GO_REF:0000024 (MGI:3040115|PMID:15109498) (PMID:15109498)
UniProt RGD
PMID:15109498
GO_REF:0000024 MGI:3040115
NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446
G
Ctnnb1
catenin beta 1
acts_upstream_of_or_within
ISO
MGI:2148567|MGI:3044412 (PMID:15576404), (PMID:15802266)
RGD
PMID:15576404 PMID:15802266
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
G
Ddx5
DEAD-box helicase 5
involved_in
ISO
(MGI:5315698|PMID:17960593)
RGD
PMID:17960593
MGI:5315698
NCBI chr10:91,723,508...91,732,210
Ensembl chr10:91,723,508...91,732,283
G
Esrra
estrogen related receptor, alpha
IMP
RGD
PMID:11381083
RGD:1625633
NCBI chr 1:204,104,100...204,114,182
Ensembl chr 1:204,104,101...204,114,268
G
Fzd1
frizzled class receptor 1
IEP
RGD
PMID:1334084
RGD:61590
NCBI chr 4:29,310,303...29,314,701
Ensembl chr 4:29,310,091...29,312,643 Ensembl chr 4:29,310,091...29,312,643
G
Gli1
GLI family zinc finger 1
involved_in
ISO
(MGI:5429486|PMID:22493482)
RGD
PMID:22493482
MGI:5429486
NCBI chr 7:63,156,926...63,169,579
Ensembl chr 7:63,156,926...63,169,251
G
Gsk3b
glycogen synthase kinase 3 beta
IMP
RGD
PMID:28731198
RGD:13792731
NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
G
Hemgn
hemogen
involved_in
IDA IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central RGD
PMID:11161722
GO_REF:0000033 GO_REF:0000118, RGD:632552
NCBI chr 5:60,679,633...60,698,597
Ensembl chr 5:60,679,633...60,698,669
G
Mir188
microRNA 188
acts_upstream_of_or_within
ISO
(PMID:25751060)
RGD
PMID:25751060
NCBI chr X:15,247,715...15,247,794
Ensembl chr X:15,247,715...15,247,794
G
Nell1
neural EGFL like 1
involved_in
IMP IEA IBA
GO_REF:0000118 GO_REF:0000033
TreeGrafter GO_Central RGD
PMID:12235118
GO_REF:0000033 GO_REF:0000118, RGD:633405
NCBI chr 1:99,709,305...100,573,872
Ensembl chr 1:99,709,793...100,573,860
G
Prkaca
protein kinase cAMP-activated catalytic subunit alpha
involved_in
ISO IEA
(PMID:19949837) GO_REF:0000107
RGD Ensembl
PMID:19949837
GO_REF:0000107
NCBI chr19:24,155,081...24,178,430
Ensembl chr19:24,155,090...24,178,430
G
Ptk2
protein tyrosine kinase 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:16927379)
UniProt RGD
PMID:16927379
GO_REF:0000024
NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783
G
Rassf2
Ras association domain family member 2
acts_upstream_of_or_within
ISO
MGI:5314787 (PMID:22227519)
RGD
PMID:22227519
NCBI chr 3:119,244,288...119,280,462
Ensembl chr 3:119,245,821...119,280,431
G
Rest
RE1-silencing transcription factor
involved_in
ISS ISO
GO_REF:0000024 (MGI:5641106|PMID:25838543)
UniProt RGD
PMID:25838543
GO_REF:0000024 MGI:5641106
NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354
G
Runx2
RUNX family transcription factor 2
acts_upstream_of_or_within
TAS ISO
(PMID:21628588)
RGD
PMID:21628588 PMID:9651525
RGD:69800
NCBI chr 9:16,167,504...16,492,826
Ensembl chr 9:16,167,482...16,492,167
G
Smoc1
SPARC related modular calcium binding 1
involved_in
ISO
(PMID:20359165)
RGD
PMID:20359165
NCBI chr 6:100,701,330...100,897,441
Ensembl chr 6:100,701,346...100,862,699
G
Snai2
snail family transcriptional repressor 2
involved_in
ISO
(PMID:19756381), (PMID:21182836)
RGD
PMID:19756381 PMID:21182836
NCBI chr11:86,182,788...86,186,203
Ensembl chr11:86,181,909...86,186,200
G
Tcirg1
T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3
acts_upstream_of_or_within
ISO
MGI:1856973 (PMID:22351931)
RGD
PMID:22351931
NCBI chr 1:201,127,034...201,138,787
Ensembl chr 1:201,127,034...201,138,742
G
Ucma
upper zone of growth plate and cartilage matrix associated
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr17:73,293,977...73,303,709
Ensembl chr17:73,293,978...73,303,611
G
Notch2
notch receptor 2
involved_in
ISO IEA ISS
(PMID:29149593) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:29149593
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:185,610,594...185,744,088
Ensembl chr 2:185,610,589...185,744,088
G
Siglec15
sialic acid binding Ig-like lectin 15
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:1277211 (PMID:22451653)
GO_Central RGD
PMID:22451653
GO_REF:0000033
NCBI chr18:71,506,416...71,521,894
Ensembl chr18:71,505,399...71,521,881
G
Tyrobp
transmembrane immune signaling adaptor Tyrobp
acts_upstream_of_or_within
ISO
MGI:3646642 (PMID:22451653)
RGD
PMID:22451653
NCBI chr 1:85,672,931...85,676,856
Ensembl chr 1:85,672,994...85,676,848
G
Adam10
ADAM metallopeptidase domain 10
NAS
RGD
PMID:10423016
RGD:631800
NCBI chr 8:71,346,008...71,477,889
Ensembl chr 8:71,345,837...71,477,889
G
Apc
APC regulator of WNT signaling pathway
acts_upstream_of_or_within
ISO
MGI:1857966 (PMID:15802266)
RGD
PMID:15802266
NCBI chr18:25,828,558...25,925,511
Ensembl chr18:25,864,222...25,922,696
G
Cebpb
CCAAT/enhancer binding protein beta
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:3849531|PMID:19440205)
UniProt Ensembl RGD
PMID:19440205
GO_REF:0000024 GO_REF:0000107 MGI:3849531
NCBI chr 3:156,398,035...156,399,466
Ensembl chr 3:156,397,052...156,399,473
G
Ctnnb1
catenin beta 1
acts_upstream_of_or_within
ISO
MGI:2148567 (PMID:15802266)
RGD
PMID:15802266
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
G
Esrra
estrogen related receptor, alpha
IMP
RGD
PMID:12193582
RGD:625668
NCBI chr 1:204,104,100...204,114,182
Ensembl chr 1:204,104,101...204,114,268
G
Fgfr3
fibroblast growth factor receptor 3
acts_upstream_of_or_within
ISO
MGI:2135670 (PMID:20053668)
RGD
PMID:20053668
NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341
G
Fshb
follicle stimulating hormone subunit beta
acts_upstream_of_or_within
ISO
MGI:1857434 (PMID:16630814)
RGD
PMID:16630814
NCBI chr 3:93,548,560...93,552,370
Ensembl chr 3:93,548,560...93,552,370
G
Fshr
follicle stimulating hormone receptor
acts_upstream_of_or_within
ISO
MGI:2384087 (PMID:16630814)
RGD
PMID:16630814
NCBI chr 6:5,198,825...5,406,785
Ensembl chr 6:5,198,825...5,406,785
G
Mitf
melanocyte inducing transcription factor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1856085|MGI:98511 (PMID:11930005)
Ensembl RGD
PMID:11930005
GO_REF:0000107
NCBI chr 4:130,409,020...130,621,145
Ensembl chr 4:130,409,217...130,621,145
G
Mtor
mechanistic target of rapamycin kinase
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:3849531|PMID:19440205)
UniProt Ensembl RGD
PMID:19440205
GO_REF:0000024 GO_REF:0000107 MGI:3849531
NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
G
Prxl2a
peroxiredoxin like 2A
involved_in
ISO IEA
(PMID:19951071) GO_REF:0000107
RGD Ensembl
PMID:19951071
GO_REF:0000107
NCBI chr16:16,866,601...16,886,378
Ensembl chr16:16,866,603...16,886,433
G
Rassf2
Ras association domain family member 2
acts_upstream_of_or_within
ISO
MGI:5314787 (PMID:22227519)
RGD
PMID:22227519
NCBI chr 3:119,244,288...119,280,462
Ensembl chr 3:119,245,821...119,280,431
G
Tfe3
transcription factor binding to IGHM enhancer 3
acts_upstream_of_or_within
ISO
MGI:104554 (PMID:11930005)
RGD
PMID:11930005
NCBI chr X:14,729,547...14,742,830
Ensembl chr X:14,729,550...14,742,571
G
Tnf
tumor necrosis factor
acts_upstream_of_or_within
ISO
(PMID:12490655)
RGD
PMID:12490655
NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
G
Tnfsf11
TNF superfamily member 11
acts_upstream_of_or_within
ISO
(PMID:12490655), (PMID:23395171)
RGD
PMID:12490655 PMID:23395171
NCBI chr15:53,673,850...53,705,325
Ensembl chr15:53,673,877...53,705,445
G
Ubash3b
ubiquitin associated and SH3 domain containing, B
involved_in
ISO IBA
(MGI:5619442|PMID:23149425) GO_REF:0000033
RGD GO_Central
PMID:23149425
GO_REF:0000033 MGI:5619442
NCBI chr 8:41,385,419...41,532,248
Ensembl chr 8:41,388,341...41,532,201
G
Zbtb7a
zinc finger and BTB domain containing 7a
IDA
RGD
PMID:10477728
RGD:633299
NCBI chr 7:8,561,015...8,578,243
Ensembl chr 7:8,563,779...8,576,539
G
Ajap1
adherens junctions associated protein 1
involved_in
ISO
(PMID:14595118)
RGD
PMID:14595118
NCBI chr 5:163,907,846...164,021,004
Ensembl chr 5:163,907,847...164,020,317
G
Foxn1
forkhead box N1
involved_in
ISO
(MGI:5554515|PMID:24184560)
RGD
PMID:24184560
MGI:5554515
NCBI chr10:63,251,400...63,273,710
Ensembl chr10:63,251,400...63,273,710
G
Tox
thymocyte selection-associated high mobility group box
involved_in
ISO
(MGI:3773459|PMID:18195075)
RGD
PMID:18195075
MGI:3773459
NCBI chr 5:19,874,994...20,171,272
Ensembl chr 5:19,874,467...20,171,272
G
Gata1
GATA binding protein 1
acts_upstream_of_or_within
ISO
MGI:95662 (PMID:14504093)
RGD
PMID:14504093
NCBI chr X:14,529,706...14,537,530
Ensembl chr X:14,529,702...14,537,530
G
Gata2
GATA binding protein 2
acts_upstream_of_or_within
ISO
MGI:95661 (PMID:14504093)
RGD
PMID:14504093
NCBI chr 4:120,654,205...120,667,763
Ensembl chr 4:120,658,986...120,667,761
G
Kdm1a
lysine demethylase 1A
involved_in
ISO
(MGI:5284774|PMID:17707228)
RGD
PMID:17707228
MGI:5284774
NCBI chr 5:148,782,976...148,838,319
Ensembl chr 5:148,782,976...148,838,319
G
Flcn
folliculin
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:3774414 (PMID:22709692)
UniProt RGD
PMID:22709692
GO_REF:0000024
NCBI chr10:44,588,621...44,607,808
Ensembl chr10:44,588,624...44,607,769
G
Fnip1
folliculin interacting protein 1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:5445116 (PMID:22709692)
UniProt RGD
PMID:22709692
GO_REF:0000024
NCBI chr10:38,567,728...38,650,824
Ensembl chr10:38,567,729...38,650,824
G
Sos1
SOS Ras/Rac guanine nucleotide exchange factor 1
acts_upstream_of_or_within
ISO
MGI:98355 (PMID:24043312)
RGD
PMID:24043312
NCBI chr 6:14,533,870...14,613,348
Ensembl chr 6:14,533,360...14,611,107
G
Sos2
SOS Ras/Rho guanine nucleotide exchange factor 2
acts_upstream_of_or_within
ISO
MGI:98355 (PMID:24043312)
RGD
PMID:24043312
NCBI chr 6:88,042,966...88,156,140
Ensembl chr 6:88,042,966...88,156,692
G
Cd28
Cd28 molecule
acts_upstream_of_or_within
ISO
MGI:96756|MGI:98725 (PMID:21245484)
RGD
PMID:21245484
NCBI chr 9:62,166,324...62,194,674
Ensembl chr 9:62,166,192...62,194,685
G
Dicer1
dicer 1 ribonuclease III
acts_upstream_of_or_within
ISO
(PMID:18725527)
RGD
PMID:18725527
NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
G
Drosha
drosha ribonuclease III
acts_upstream_of_or_within
ISO
(PMID:18725527)
RGD
PMID:18725527
NCBI chr 2:61,864,886...61,976,688
Ensembl chr 2:61,864,970...61,976,688
G
Fanca
FA complementation group A
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:2674094 (PMID:24501220)
GO_Central RGD
PMID:24501220
GO_REF:0000033
NCBI chr19:51,304,126...51,362,586
Ensembl chr19:51,304,021...51,362,527
G
Fancd2
FA complementation group D2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2673422 (PMID:24501220)
Ensembl RGD
PMID:24501220
GO_REF:0000107
NCBI chr 4:146,679,014...146,743,422
Ensembl chr 4:146,679,179...146,743,412
G
Kat2a
lysine acetyltransferase 2A
involved_in
ISO
(MGI:5926326|PMID:28424240)
RGD
PMID:28424240
MGI:5926326
NCBI chr10:85,632,216...85,640,561
Ensembl chr10:85,632,216...85,640,166
G
Lck
LCK proto-oncogene, Src family tyrosine kinase
acts_upstream_of_or_within
ISO
MGI:88327 (PMID:21245484)
RGD
PMID:21245484
NCBI chr 5:141,888,318...141,916,945
Ensembl chr 5:141,888,326...141,903,794
G
Sh2b3
SH2B adaptor protein 3
IMP
RGD
PMID:25776069
RGD:13442483
NCBI chr12:34,731,934...34,753,617
Ensembl chr12:34,731,911...34,753,616
G
Tgfb1
transforming growth factor, beta 1
acts_upstream_of_or_within
ISO
MGI:88327 (PMID:21245484)
RGD
PMID:21245484
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
G
Ddx17
DEAD-box helicase 17
involved_in
ISO
(PMID:17011493)
RGD
PMID:17011493
NCBI chr 7:111,091,127...111,109,353
Ensembl chr 7:111,089,445...111,109,193
G
Ddx5
DEAD-box helicase 5
involved_in
ISO
(MGI:5315343|PMID:17011493)
RGD
PMID:17011493
MGI:5315343
NCBI chr10:91,723,508...91,732,210
Ensembl chr10:91,723,508...91,732,283
G
Klhl41
kelch-like family member 41
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:22562206)
GO_Central RGD
PMID:22562206
GO_REF:0000033
NCBI chr 3:54,434,291...54,447,415
Ensembl chr 3:54,434,234...54,449,222
G
Nr1d2
nuclear receptor subfamily 1, group D, member 2
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:5526938|PMID:15623503)
UniProt Ensembl RGD
PMID:15623503
GO_REF:0000024 GO_REF:0000107 MGI:5526938
NCBI chr15:7,524,257...7,550,553
Ensembl chr15:7,524,257...7,550,553
G
Rbfox1
RNA binding fox-1 homolog 1
acts_upstream_of_or_within
ISO
(PMID:23349951)
RGD
PMID:23349951
NCBI chr10:8,152,198...10,248,120
Ensembl chr10:8,152,198...9,686,659
G
Six1
SIX homeobox 1
involved_in
ISO
(MGI:4836102|PMID:20696153)
RGD
PMID:20696153
MGI:4836102
NCBI chr 6:91,746,739...91,751,975
Ensembl chr 6:91,746,739...91,751,975
G
Uqcc2
ubiquinol-cytochrome c reductase complex assembly factor 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:5520038|PMID:22363741)
UniProt RGD
PMID:22363741
GO_REF:0000024 MGI:5520038
NCBI chr20:5,202,837...5,214,541
Ensembl chr20:5,202,837...5,214,164
G
Fbxo22
F-box protein 22
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:19319192)
GO_Central RGD
PMID:19319192
GO_REF:0000033
NCBI chr 8:55,579,906...55,595,981
Ensembl chr 8:55,579,891...55,596,148
G
Hdac4
histone deacetylase 4
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1333784|MGI:1931221 (PMID:17786239)
Ensembl RGD
PMID:17786239
GO_REF:0000107
NCBI chr 9:92,503,467...92,750,164
Ensembl chr 9:92,507,611...92,750,164
G
Hdac5
histone deacetylase 5
acts_upstream_of_or_within
ISO
MGI:1931221|MGI:3036234 (PMID:17786239)
RGD
PMID:17786239
NCBI chr10:87,152,978...87,187,921
Ensembl chr10:87,152,978...87,188,235
G
Hdac9
histone deacetylase 9
acts_upstream_of_or_within
ISO
MGI:1333784|MGI:3036284 (PMID:17786239)
RGD
PMID:17786239
NCBI chr 6:50,762,074...51,624,311
Ensembl chr 6:50,763,590...51,625,333
G
Naca
nascent polypeptide associated complex subunit alpha
involved_in
ISO
(MGI:4867362|PMID:21071677)
RGD
PMID:21071677
MGI:4867362
NCBI chr 7:468,862...481,992
Ensembl chr 7:469,723...481,992
G
Hdac4
histone deacetylase 4
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1333784|MGI:1931221 (PMID:17786239)
Ensembl RGD
PMID:17786239
GO_REF:0000107
NCBI chr 9:92,503,467...92,750,164
Ensembl chr 9:92,507,611...92,750,164
G
Hdac5
histone deacetylase 5
acts_upstream_of_or_within
ISO
MGI:1931221|MGI:3036234 (PMID:17786239)
RGD
PMID:17786239
NCBI chr10:87,152,978...87,187,921
Ensembl chr10:87,152,978...87,188,235
G
Hdac9
histone deacetylase 9
acts_upstream_of_or_within
ISO
MGI:1333784|MGI:3036284 (PMID:17786239)
RGD
PMID:17786239
NCBI chr 6:50,762,074...51,624,311
Ensembl chr 6:50,763,590...51,625,333
G
Nln
neurolysin
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:4125183 (PMID:24719333)
Ensembl RGD
PMID:24719333
GO_REF:0000107
NCBI chr 2:35,133,634...35,232,927
Ensembl chr 2:35,134,145...35,232,914
G
Bmp4
bone morphogenetic protein 4
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1347470 (PMID:17881493)
Ensembl RGD
PMID:17881493
GO_REF:0000107
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Enpp3
ectonucleotide pyrophosphatase/phosphodiesterase 3
NAS
RGD
PMID:9642040
RGD:1299488
NCBI chr 1:20,563,700...20,635,044
Ensembl chr 1:20,563,697...20,635,041
G
Fgfr2
fibroblast growth factor receptor 2
acts_upstream_of_or_within
ISO
MGI:3629660 (PMID:16989802)
RGD
PMID:16989802
NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626
G
Myocd
myocardin
IMP
RGD
PMID:12756293
RGD:1299358
NCBI chr10:49,833,219...49,928,806
Ensembl chr10:49,836,641...49,927,627
G
Zeb1
zinc finger E-box binding homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:16824956)
Ensembl RGD
PMID:16824956
GO_REF:0000107
NCBI chr17:51,948,948...52,116,018
Ensembl chr17:51,948,948...52,115,214
G
Tcp11
t-complex 11
involved_in
ISS IBA IEA ISO
GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 (MGI:1097498|PMID:9322250), (MGI:5816449|PMID:9820206)
UniProt GO_Central TreeGrafter RGD
PMID:9322250 PMID:9820206
GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 MGI:1097498 MGI:5816449
NCBI chr20:6,126,267...6,138,408
Ensembl chr20:6,126,269...6,136,055
G
Tcp11x2
t-complex 11 family, X-linked 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr X:98,591,191...98,640,800
Ensembl chr X:98,591,189...98,640,763
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Dicer1
dicer 1 ribonuclease III
acts_upstream_of_or_within
ISO
MGI:3589287 (PMID:15713842)
RGD
PMID:15713842
NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
G
Kdm3a
lysine demethylase 3A
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:17938240)
Ensembl RGD
PMID:17938240
GO_REF:0000107
NCBI chr 4:103,630,907...103,675,073
Ensembl chr 4:103,630,908...103,675,073
G
Kdm4c
lysine demethylase 4C
acts_upstream_of_or_within
ISO
(PMID:17938240)
RGD
PMID:17938240
NCBI chr 5:88,100,710...88,306,821
Ensembl chr 5:88,100,733...88,306,818
G
Mir146a
microRNA 146a
involved_in
ISO
(PMID:29384235)
RGD
PMID:29384235
NCBI chr10:27,848,516...27,848,610
Ensembl chr10:27,848,516...27,848,610
G
Mir295-1
microRNA 295-1
involved_in
ISO
(PMID:21490602)
RGD
PMID:21490602
NCBI chr 1:65,962,566...65,962,646
Ensembl chr 1:65,962,566...65,962,646
G
Nsun2
NOP2/Sun RNA methyltransferase 2
involved_in
ISO
(MGI:5304206|PMID:22144916)
RGD
PMID:22144916
MGI:5304206
NCBI chr 1:33,662,139...33,685,887
Ensembl chr 1:33,662,139...33,685,862
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Ociad1
OCIA domain containing 1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000104 (MGI:5908327|PMID:23972987)
UniProt RGD
PMID:23972987
GO_REF:0000024 GO_REF:0000104 MGI:5908327
NCBI chr14:34,897,851...34,915,291
Ensembl chr14:34,897,847...34,915,286
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Prdm4
PR/SET domain 4
involved_in
IMP
PMID:23048031
ParkinsonsUK-UCL
PMID:23048031
RGD:10054084
NCBI chr 7:17,953,832...17,980,489
Ensembl chr 7:17,954,019...17,980,489
G
Smyd5
SMYD family member 5
involved_in
ISO
(PMID:28951459) (MGI:6103640|PMID:28951459), (MGI:6709288|PMID:28250819)
RGD
PMID:28250819 PMID:28951459
MGI:6103640 MGI:6709288
NCBI chr 4:117,969,615...117,984,082
Ensembl chr 4:117,969,626...117,984,347
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Tead2
TEA domain transcription factor 2
acts_upstream_of_or_within
ISO
(PMID:21385842)
RGD
PMID:21385842
NCBI chr 1:95,702,366...95,719,186
Ensembl chr 1:95,703,005...95,719,186
G
Tgfbr2
transforming growth factor, beta receptor 2
involved_in
IEA ISO
GO_REF:0000107 (PMID:21490602)
Ensembl RGD
PMID:21490602
GO_REF:0000107
NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228
G
Abl1
ABL proto-oncogene 1, non-receptor tyrosine kinase
involved_in
ISO
(MGI:5142352|PMID:21690296)
RGD
PMID:21690296
MGI:5142352
NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065
G
Ada
adenosine deaminase
acts_upstream_of_or_within
ISO
MGI:2155977 (PMID:7670465)
RGD
PMID:7670465
NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088
G
Braf
B-Raf proto-oncogene, serine/threonine kinase
acts_upstream_of_or_within
ISO
MGI:1857579 (PMID:18228248)
RGD
PMID:18228248
NCBI chr 4:68,375,484...68,510,652
Ensembl chr 4:68,384,649...68,510,463
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Card11
caspase recruitment domain family, member 11
acts_upstream_of_or_within
ISO
MGI:3039682 (PMID:12867038)
RGD
PMID:12867038
NCBI chr12:13,621,140...13,758,115
Ensembl chr12:13,621,087...13,758,112
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Ccr2
C-C motif chemokine receptor 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:5926947|PMID:28507030)
UniProt RGD
PMID:28507030
GO_REF:0000024 MGI:5926947
NCBI chr 8:123,734,465...123,742,483
Ensembl chr 8:123,734,430...123,742,100
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Crtam
cytotoxic and regulatory T cell molecule
involved_in
ISO
(MGI:5581366|PMID:24687959)
RGD
PMID:24687959
MGI:5581366
NCBI chr 8:41,340,117...41,377,381
Ensembl chr 8:41,340,837...41,377,343
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Cyp26b1
cytochrome P450, family 26, subfamily b, polypeptide 1
acts_upstream_of_or_within
ISO
MGI:3764691 (PMID:23991089)
RGD
PMID:23991089
NCBI chr 4:117,041,808...117,058,628
Ensembl chr 4:117,041,808...117,058,628
G
Dux4
double homeobox 4
acts_upstream_of_or_within
ISO
(PMID:17911620)
RGD
PMID:17911620
NCBI chr16:1,558,430...1,570,045
Ensembl chr16:1,558,766...1,568,565
G
Fas
Fas cell surface death receptor
acts_upstream_of_or_within
ISO
MGI:1856334 (PMID:6610701)
RGD
PMID:6610701
NCBI chr 1:231,798,963...231,832,591
Ensembl chr 1:231,798,960...231,832,591
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Il15
interleukin 15
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2136897 (PMID:10704459)
Ensembl RGD
PMID:10704459
GO_REF:0000107
NCBI chr19:25,640,025...25,706,818
Ensembl chr19:25,640,251...25,706,820
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Mettl3
methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit
involved_in
ISO
(MGI:6094929|PMID:28792938)
RGD
PMID:28792938
MGI:6094929
NCBI chr15:25,002,505...25,014,097
Ensembl chr15:25,003,172...25,014,041
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Prelid1
PRELI domain containing 1
involved_in
ISO
(PMID:18945965)
RGD
PMID:18945965
NCBI chr17:9,305,349...9,308,389
Ensembl chr17:9,305,361...9,308,407
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Rag1
recombination activating 1
acts_upstream_of_or_within
ISO
MGI:1353616 (PMID:18684012)
RGD
PMID:18684012
NCBI chr 3:87,917,061...87,928,158
Ensembl chr 3:87,917,004...87,928,291
G
RT1-DOa
RT1 class II, locus DOa
acts_upstream_of_or_within
ISO
MGI:2386294 (PMID:11069069)
RGD
PMID:11069069
NCBI chr20:4,753,587...4,756,590
Ensembl chr20:4,753,598...4,756,577
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Slc46a2
solute carrier family 46, member 2
acts_upstream_of_or_within
ISO
MGI:97848 (PMID:18684012)
RGD
PMID:18684012
NCBI chr 5:74,800,226...74,808,128
Ensembl chr 5:74,800,226...74,808,128
G
Tbx21
T-box transcription factor 21
involved_in
ISO
(MGI:5142352|PMID:21690296)
RGD
PMID:21690296
MGI:5142352
NCBI chr10:82,082,322...82,098,831
Ensembl chr10:82,082,322...82,098,831
G
Ada
adenosine deaminase
IMP
RGD
PMID:3876160
RGD:152995412
NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088
G
Adrm1
ADRM1 26S proteasome ubiquitin receptor
involved_in
ISO
(MGI:4849324|PMID:21048919)
RGD
PMID:21048919
MGI:4849324
NCBI chr 3:167,265,435...167,270,197
Ensembl chr 3:167,265,296...167,270,195
G
Ankle1
ankyrin repeat and LEM domain containing 1
NOT|involved_in
ISO
(MGI:5800654|PMID:27010503)
RGD
PMID:27010503
MGI:5800654
NCBI chr16:18,076,413...18,082,356
Ensembl chr16:18,076,492...18,083,729
G
Clptm1
CLPTM1 regulator of GABA type A receptor forward trafficking
involved_in
ISO
(MGI:1095293|PMID:9218588)
RGD
PMID:9218588
MGI:1095293
NCBI chr 1:79,289,478...79,321,079
Ensembl chr 1:79,289,477...79,321,092
G
Foxn1
forkhead box N1
acts_upstream_of_or_within
ISO
MGI:5297717 (PMID:22072979)
RGD
PMID:22072979
NCBI chr10:63,251,400...63,273,710
Ensembl chr10:63,251,400...63,273,710
G
Lgals9
galectin 9
NOT|involved_in
ISO
(MGI:5688819|PMID:25065622)
RGD
PMID:25065622
MGI:5688819
NCBI chr10:63,907,018...63,930,224
Ensembl chr10:63,907,018...63,930,045
G
Sos1
SOS Ras/Rac guanine nucleotide exchange factor 1
acts_upstream_of_or_within
ISO
MGI:98355 (PMID:24043312)
RGD
PMID:24043312
NCBI chr 6:14,533,870...14,613,348
Ensembl chr 6:14,533,360...14,611,107
G
Sos2
SOS Ras/Rho guanine nucleotide exchange factor 2
acts_upstream_of_or_within
ISO
MGI:98354 (PMID:24043312)
RGD
PMID:24043312
NCBI chr 6:88,042,966...88,156,140
Ensembl chr 6:88,042,966...88,156,692
G
Zeb1
zinc finger E-box binding homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857515|MGI:1857799 (PMID:9126927), (PMID:9389660)
Ensembl RGD
PMID:9126927 PMID:9389660
GO_REF:0000107
NCBI chr17:51,948,948...52,116,018
Ensembl chr17:51,948,948...52,115,214
G
Il27
interleukin 27
involved_in
ISO IBA
(PMID:12734330) GO_REF:0000033
RGD GO_Central
PMID:12734330
GO_REF:0000033
NCBI chr 1:181,173,108...181,178,720
Ensembl chr 1:181,173,372...181,178,582
G
Ccl20
C-C motif chemokine ligand 20
NOT|involved_in
ISO
(MGI:3820359|PMID:19050256)
RGD
PMID:19050256
MGI:3820359
NCBI chr 9:84,389,031...84,391,629
Ensembl chr 9:84,388,904...84,391,629
G
Ccr6
C-C motif chemokine receptor 6
NOT|involved_in
ISO
(MGI:3820359|PMID:19050256)
RGD
PMID:19050256
MGI:3820359
NCBI chr 1:52,474,477...52,508,301
Ensembl chr 1:52,474,168...52,498,603
G
Mir301a
microRNA 301a
acts_upstream_of_or_within
ISO
(PMID:22517757)
RGD
PMID:22517757
NCBI chr10:71,925,336...71,925,435
Ensembl chr10:71,925,336...71,925,435
G
Gata3
GATA binding protein 3
acts_upstream_of_or_within
ISO
MGI:3487291 (PMID:18776904)
RGD
PMID:18776904
NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
G
Il12rb2
interleukin 12 receptor subunit beta 2
NAS
RGD
PMID:10651948
RGD:1331512
NCBI chr 4:96,426,396...96,515,251
Ensembl chr 4:96,426,842...96,515,289
G
RT1-Da
RT1 class II, locus Da
involved_in
ISO
(PMID:15322540)
RGD
PMID:15322540
NCBI chr20:4,513,464...4,518,457
Ensembl chr20:4,512,911...4,518,455
G
RT1-Db1
RT1 class II, locus Db1
involved_in
ISO
(PMID:15322540)
RGD
PMID:15322540
NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258
G
Zbtb7b
zinc finger and BTB domain containing 7B
acts_upstream_of_or_within
ISO
MGI:3817628 (PMID:18776904)
RGD
PMID:18776904
NCBI chr 2:174,795,831...174,811,980
Ensembl chr 2:174,797,453...174,814,236
G
Fgf9
fibroblast growth factor 9
acts_upstream_of_or_within
ISO
MGI:2135961 (PMID:17544391)
RGD
PMID:17544391
NCBI chr15:32,208,993...32,254,952
Ensembl chr15:32,210,074...32,253,309
G
Gdpd5
glycerophosphodiester phosphodiesterase domain containing 5
acts_upstream_of_or_within
ISO
MGI:5302017 (PMID:22951639)
RGD
PMID:22951639
NCBI chr 1:153,679,718...153,761,452
Ensembl chr 1:153,679,718...153,761,446
G
Hes1
hes family bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:2149672 (PMID:17015435), (PMID:8543157)
RGD
PMID:8543157 PMID:17015435
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
G
Pax6
paired box 6
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1856155 (PMID:9828088)
Ensembl RGD
PMID:9828088
GO_REF:0000107
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
G
Rbpj
recombination signal binding protein for immunoglobulin kappa J region
acts_upstream_of_or_within
ISO
MGI:3583755 (PMID:17015435)
RGD
PMID:17015435
NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353
G
Serpine2
serpin family E member 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:17409116)
Ensembl RGD
PMID:17409116
GO_REF:0000107
NCBI chr 9:81,124,746...81,188,866
Ensembl chr 9:81,124,804...81,188,826
G
Hes1
hes family bHLH transcription factor 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:104877|MGI:2149672 (PMID:11500373), (PMID:8543157)
Ensembl RGD
PMID:8543157 PMID:11500373
GO_REF:0000107
NCBI chr11:70,705,763...70,708,176
Ensembl chr11:70,705,764...70,708,192
G
Hes3
hes family bHLH transcription factor 3
acts_upstream_of_or_within
ISO
MGI:104853 (PMID:11500373)
RGD
PMID:11500373
NCBI chr 5:162,793,611...162,799,578
Ensembl chr 5:162,794,367...162,796,261
G
Nr2e1
nuclear receptor subfamily 2, group E, member 1
acts_upstream_of_or_within
ISO
MGI:2151350 (PMID:15385616)
RGD
PMID:15385616
NCBI chr20:46,050,134...46,071,257
Ensembl chr20:46,050,414...46,073,949
G
Sox5
SRY-box transcription factor 5
acts_upstream_of_or_within
ISO
(PMID:18215621)
RGD
PMID:18215621
NCBI chr 4:176,781,375...177,736,833
Ensembl chr 4:176,785,892...177,736,852
G
Ascl1
achaete-scute family bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:1857470 (PMID:9876181)
RGD
PMID:9876181
NCBI chr 7:21,903,136...21,906,003
Ensembl chr 7:21,903,126...21,905,993
G
Bmal1
basic helix-loop-helix ARNT like 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:4819446|PMID:20562852)
UniProt RGD
PMID:20562852
GO_REF:0000024 MGI:4819446
NCBI chr 1:167,331,756...167,430,235
Ensembl chr 1:167,331,633...167,430,231
G
Clock
clock circadian regulator
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:4819446|PMID:20562852) GO_REF:0000107
UniProt RGD Ensembl
PMID:20562852
GO_REF:0000024 GO_REF:0000107 MGI:4819446
NCBI chr14:31,908,542...31,992,673
Ensembl chr14:31,908,566...31,990,400
G
Rheb
Ras homolog, mTORC1 binding
involved_in
ISO IEA
(PMID:19258434) GO_REF:0000107
RGD Ensembl
PMID:19258434
GO_REF:0000107
NCBI chr 4:10,278,970...10,320,160
Ensembl chr 4:10,279,370...10,320,160
G
Emp2
epithelial membrane protein 2
involved_in
ISO ISS
(PMID:23334331) GO_REF:0000024
RGD UniProt
PMID:23334331
GO_REF:0000024
NCBI chr10:5,360,073...5,394,734
Ensembl chr10:5,360,073...5,394,733
G
Hey1
hes-related family bHLH transcription factor with YRPW motif 1
involved_in
ISO
UniProtKB:Q9QUS4 (MGI:3040159|PMID:15107403)
RGD
PMID:15107403
MGI:3040159
NCBI chr 2:93,096,605...93,100,316
Ensembl chr 2:93,095,498...93,100,312
G
Hey2
hes-related family bHLH transcription factor with YRPW motif 2
involved_in
ISO
UniProtKB:Q9WV93 (MGI:3040159|PMID:15107403)
RGD
PMID:15107403
MGI:3040159
NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
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