ONTOLOGY REPORT - ANNOTATIONS
Term: regulation of T cell differentiation
Accession: GO:0045580
browse the term
Definition: Any process that modulates the frequency, rate or extent of T cell differentiation.
Comment: Note that immunologists typically use the word 'development' to refer to cells of B or T cell lineages undergoing the process that GO describes as 'cell differentiation'.
Synonyms: exact_synonym: regulation of T lymphocyte differentiation
related_synonym: regulation of T cell development
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Abl1
ABL proto-oncogene 1, non-receptor tyrosine kinase
involved_in
ISO
(PMID:21690296)
RGD
PMID:21690296
NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065
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Ada
adenosine deaminase
acts_upstream_of_or_within
ISO
MGI:2155977 (PMID:7670465)
RGD
PMID:7670465
NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088
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Braf
B-Raf proto-oncogene, serine/threonine kinase
acts_upstream_of_or_within
ISO
MGI:1857579 (PMID:18228248)
RGD
PMID:18228248
NCBI chr 4:68,375,484...68,510,652
Ensembl chr 4:68,384,649...68,510,463
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Card11
caspase recruitment domain family, member 11
acts_upstream_of_or_within
ISO
MGI:3039682 (PMID:12867038)
RGD
PMID:12867038
NCBI chr12:13,621,140...13,758,115
Ensembl chr12:13,621,087...13,758,112
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Ccr2
C-C motif chemokine receptor 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:28507030)
UniProt RGD
PMID:28507030
GO_REF:0000024
NCBI chr 8:123,734,465...123,742,483
Ensembl chr 8:123,734,430...123,742,100
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Crtam
cytotoxic and regulatory T cell molecule
involved_in
ISO
(PMID:24687959)
RGD
PMID:24687959
NCBI chr 8:41,340,117...41,377,381
Ensembl chr 8:41,340,837...41,377,343
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Cyp26b1
cytochrome P450, family 26, subfamily b, polypeptide 1
acts_upstream_of_or_within
ISO
MGI:3764691 (PMID:23991089)
RGD
PMID:23991089
NCBI chr 4:117,041,808...117,058,628
Ensembl chr 4:117,041,808...117,058,628
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Dux4
double homeobox 4
acts_upstream_of_or_within
ISO
(PMID:17911620)
RGD
PMID:17911620
NCBI chr16:1,558,430...1,570,045
Ensembl chr16:1,558,766...1,568,565
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Fas
Fas cell surface death receptor
acts_upstream_of_or_within
ISO
MGI:1856334 (PMID:6610701)
RGD
PMID:6610701
NCBI chr 1:231,798,963...231,832,591
Ensembl chr 1:231,798,960...231,832,591
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Il15
interleukin 15
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2136897 (PMID:10704459)
Ensembl RGD
PMID:10704459
GO_REF:0000107
NCBI chr19:25,640,025...25,706,818
Ensembl chr19:25,640,251...25,706,820
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Mettl3
methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit
involved_in
ISO
(PMID:28792938)
RGD
PMID:28792938
NCBI chr15:25,002,505...25,014,097
Ensembl chr15:25,003,172...25,014,041
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Prelid1
PRELI domain containing 1
involved_in
ISO
(PMID:18945965)
RGD
PMID:18945965
NCBI chr17:9,305,349...9,308,389
Ensembl chr17:9,305,361...9,308,407
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Rag1
recombination activating 1
acts_upstream_of_or_within
ISO
MGI:1353616 (PMID:18684012)
RGD
PMID:18684012
NCBI chr 3:87,917,061...87,928,158
Ensembl chr 3:87,917,004...87,928,291
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RT1-DOa
RT1 class II, locus DOa
acts_upstream_of_or_within
ISO
MGI:2386294 (PMID:11069069)
RGD
PMID:11069069
NCBI chr20:4,753,587...4,756,590
Ensembl chr20:4,753,598...4,756,577
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Slc46a2
solute carrier family 46, member 2
acts_upstream_of_or_within
ISO
MGI:97848 (PMID:18684012)
RGD
PMID:18684012
NCBI chr 5:74,800,226...74,808,128
Ensembl chr 5:74,800,226...74,808,128
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Tbx21
T-box transcription factor 21
involved_in
ISO
(PMID:21690296)
RGD
PMID:21690296
NCBI chr10:82,082,322...82,098,831
Ensembl chr10:82,082,322...82,098,831
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Gli3
GLI family zinc finger 3
involved_in
ISO
(PMID:19667090)
RGD
PMID:19667090
NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
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Ihh
Indian hedgehog signaling molecule
involved_in
ISO
(PMID:19109233)
RGD
PMID:19109233
NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532
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Shh
sonic hedgehog signaling molecule
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:10981962)
Ensembl RGD
PMID:10981962
GO_REF:0000107
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
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Cbfb
core-binding factor subunit beta
involved_in
ISO
(PMID:18258917)
RGD
PMID:18258917
NCBI chr19:33,049,162...33,092,752
Ensembl chr19:33,049,172...33,092,751
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Hmgb1
high mobility group box 1
involved_in
ISO
(PMID:22473704)
RGD
PMID:22473704
NCBI chr12:5,972,950...5,979,658
Ensembl chr12:5,901,586...5,978,565 Ensembl chr16:5,901,586...5,978,565
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Runx1
RUNX family transcription factor 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:18258917)
UniProt RGD
PMID:18258917
GO_REF:0000024
NCBI chr11:31,839,880...32,074,427
Ensembl chr11:31,843,764...32,074,542
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Runx3
RUNX family transcription factor 3
involved_in
ISO
(PMID:18258917)
RGD
PMID:18258917
NCBI chr 5:147,360,587...147,419,161
Ensembl chr 5:147,360,994...147,419,156
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Slc4a2
solute carrier family 4 member 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:24515893)
UniProt RGD
PMID:24515893
GO_REF:0000024
NCBI chr 4:10,736,419...10,754,407
Ensembl chr 4:10,736,425...10,752,965
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Socs1
suppressor of cytokine signaling 1
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:24880459) GO_REF:0000024
Ensembl RGD UniProt
PMID:24880459
GO_REF:0000024 GO_REF:0000107
NCBI chr10:4,882,651...4,884,342
Ensembl chr10:4,882,560...4,884,383
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Zbtb7b
zinc finger and BTB domain containing 7B
involved_in
ISO
(PMID:22730529), (PMID:24880459)
RGD
PMID:22730529 PMID:24880459
NCBI chr 2:174,795,831...174,811,980
Ensembl chr 2:174,797,453...174,814,236
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Lilrb4
leukocyte immunoglobulin like receptor B4
involved_in
ISO
(PMID:16493035)
RGD
PMID:16493035
NCBI chr 1:69,805,020...69,810,628
Ensembl chr 1:69,805,250...69,810,660
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Bmp4
bone morphogenetic protein 4
involved_in
IEA ISS ISO
GO_REF:0000107 GO_REF:0000024 (PMID:12421925)
Ensembl UniProt RGD
PMID:12421925
GO_REF:0000024 GO_REF:0000107
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
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Cdkn2a
cyclin-dependent kinase inhibitor 2A
involved_in
ISO
(PMID:15964995)
RGD
PMID:15964995
NCBI chr 5:103,984,949...103,992,143
Ensembl chr 5:103,984,949...104,003,149
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Clec4g
C-type lectin domain family 4, member G
acts_upstream_of_or_within
ISO
MGI:5510586 (PMID:23487419)
RGD
PMID:23487419
NCBI chr12:1,780,370...1,785,027
Ensembl chr12:1,780,371...1,784,985
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Erbb2
erb-b2 receptor tyrosine kinase 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:16230479)
Ensembl RGD
PMID:16230479
GO_REF:0000107
NCBI chr10:83,411,197...83,435,078
Ensembl chr10:83,411,313...83,435,078
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Ihh
Indian hedgehog signaling molecule
involved_in
ISO
(PMID:19109233)
RGD
PMID:19109233
NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532
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Tmem131l
transmembrane 131 like
involved_in
ISO
(PMID:23690469)
RGD
PMID:23690469
NCBI chr 2:169,257,659...169,391,773
Ensembl chr 2:169,258,289...169,391,711
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Fgl2
fibrinogen-like 2
acts_upstream_of_or_within
ISO
MGI:3582343 (PMID:29341118)
RGD
PMID:29341118
NCBI chr 4:13,710,566...13,716,207
Ensembl chr 4:13,710,575...13,716,207
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Ifnl1
interferon, lambda 1
involved_in
ISO
(PMID:19346497)
RGD
PMID:19346497
NCBI chr 1:83,798,651...83,800,297
Ensembl chr 1:83,798,703...83,800,235
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Ptpn2
protein tyrosine phosphatase, non-receptor type 2
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:22080863) GO_REF:0000107
UniProt RGD Ensembl
PMID:22080863
GO_REF:0000024 GO_REF:0000107
NCBI chr18:61,229,012...61,294,662
Ensembl chr18:61,229,014...61,294,627
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Cd44
CD44 molecule
involved_in
ISO
(PMID:25065622)
RGD
PMID:25065622
NCBI chr 3:89,155,850...89,244,615
Ensembl chr 3:89,157,058...89,244,620
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Ctla4
cytotoxic T-lymphocyte-associated protein 4
involved_in
ISO IBA
(PMID:18641304) GO_REF:0000033
RGD GO_Central
PMID:18641304
GO_REF:0000033
NCBI chr 9:62,318,874...62,325,978
Ensembl chr 9:62,319,312...62,324,963
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Hspb1
heat shock protein family B (small) member 1
IMP
RGD
PMID:30287503
RGD:38549580
NCBI chr12:20,794,014...20,795,675
Ensembl chr12:20,794,028...20,795,743
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Irf1
interferon regulatory factor 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:18641303)
UniProt RGD
PMID:18641303
GO_REF:0000024
NCBI chr10:37,917,155...37,924,166
Ensembl chr10:37,916,670...37,924,166
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Lag3
lymphocyte activating 3
involved_in
ISS ISO
GO_REF:0000024 (PMID:15485628)
UniProt RGD
PMID:15485628
GO_REF:0000024
NCBI chr 4:157,712,665...157,722,229
Ensembl chr 4:157,712,667...157,720,404
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Mdk
midkine
involved_in
ISO IEA ISS
(PMID:22323540) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:22323540
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:77,901,134...77,903,997
Ensembl chr 3:77,901,158...77,903,130
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Mir21
microRNA 21
involved_in
ISO
RNAcentral:URS0000338542_9606 (PMID:22387553)
RGD
PMID:22387553
NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348
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Mir30b
microRNA 30b
involved_in
ISO
RNAcentral:URS000039ED8D_9606 (PMID:22387553)
RGD
PMID:22387553
NCBI chr 7:100,132,589...100,132,675
Ensembl chr 7:100,132,589...100,132,675
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Tnfsf4
TNF superfamily member 4
involved_in
ISO
(PMID:18713990)
RGD
PMID:18713990
NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788
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Tug1
taurine up-regulated 1
IMP
RGD
PMID:30287503
RGD:38549580
NCBI chr14:78,519,894...78,526,927
Ensembl chr14:78,522,506...78,526,927
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Cd74
CD74 molecule
acts_upstream_of_or_within
ISO
MGI:1927205 (PMID:7679955)
RGD
PMID:7679955
NCBI chr18:54,256,757...54,266,003
Ensembl chr18:54,256,778...54,266,003
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Dtx1
deltex E3 ubiquitin ligase 1
acts_upstream_of_or_within
ISO
(PMID:12794108)
RGD
PMID:12794108
NCBI chr12:35,849,647...35,880,835
Ensembl chr12:35,849,617...35,880,838
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Ifnb1
interferon beta 1
involved_in
ISO
(PMID:20554961)
RGD
PMID:20554961
NCBI chr 5:103,020,758...103,021,595
Ensembl chr 5:103,020,969...103,021,523
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Ifnl1
interferon, lambda 1
involved_in
ISO
(PMID:19346497)
RGD
PMID:19346497
NCBI chr 1:83,798,651...83,800,297
Ensembl chr 1:83,798,703...83,800,235
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Nrarp
Notch-regulated ankyrin repeat protein
acts_upstream_of_or_within
ISO
(PMID:12794108)
RGD
PMID:12794108
NCBI chr 3:7,992,582...7,995,136
Ensembl chr 3:7,992,552...7,995,133
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Prdx2
peroxiredoxin 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2668456 (PMID:16290204)
Ensembl RGD
PMID:16290204
GO_REF:0000107
NCBI chr19:23,180,927...23,186,217
Ensembl chr19:23,180,930...23,186,194
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Bmp4
bone morphogenetic protein 4
involved_in
ISO
(PMID:12421925)
RGD
PMID:12421925
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
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Foxj1
forkhead box J1
involved_in
IEA ISO
GO_REF:0000107 (PMID:16339515)
Ensembl RGD
PMID:16339515
GO_REF:0000107
NCBI chr10:101,566,299...101,570,370
Ensembl chr10:101,566,304...101,570,237
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Ihh
Indian hedgehog signaling molecule
involved_in
ISO
(PMID:19109233)
RGD
PMID:19109233
NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532
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Nfkbid
NFKB inhibitor delta
acts_upstream_of_or_within
ISO
(PMID:11931770)
RGD
PMID:11931770
NCBI chr 1:85,679,353...85,690,415
Ensembl chr 1:85,680,861...85,690,447
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Rag2
recombination activating 2
IMP
RGD
PMID:30206106
RGD:38508903
NCBI chr 3:87,902,373...87,910,227
Ensembl chr 3:87,902,238...87,911,066
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Shh
sonic hedgehog signaling molecule
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:10981962)
Ensembl RGD
PMID:10981962
GO_REF:0000107
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
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Zc3h8
zinc finger CCCH type containing 8
involved_in
ISO
(PMID:12153508)
RGD
PMID:12153508
NCBI chr 3:116,176,779...116,193,752
Ensembl chr 3:116,176,798...116,193,787
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Ascl2
achaete-scute family bHLH transcription factor 2
involved_in
ISO
(PMID:24463518)
RGD
PMID:24463518
NCBI chr 1:198,148,999...198,151,406
Ensembl chr 1:198,148,999...198,151,406
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Il4r
interleukin 4 receptor
acts_upstream_of_or_within
ISO
MGI:96109 (PMID:16424184)
RGD
PMID:16424184
NCBI chr 1:180,115,061...180,139,981
Ensembl chr 1:180,115,120...180,139,980
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Jak3
Janus kinase 3
involved_in
ISS ISO
GO_REF:0000024 (PMID:16020505)
BHF-UCL RGD
PMID:16020505
GO_REF:0000024
NCBI chr16:18,386,330...18,398,542
Ensembl chr16:18,386,405...18,398,536
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Tnfsf4
TNF superfamily member 4
involved_in
ISO
(PMID:9670042)
RGD
PMID:9670042
NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788
G
Ascl2
achaete-scute family bHLH transcription factor 2
involved_in
ISO
(PMID:24463518)
RGD
PMID:24463518
NCBI chr 1:198,148,999...198,151,406
Ensembl chr 1:198,148,999...198,151,406
G
Foxp3
forkhead box P3
involved_in
ISO
(PMID:23169781)
RGD
PMID:23169781
NCBI chr X:14,908,494...14,924,994
Ensembl chr X:14,908,494...14,923,838
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Il2
interleukin 2
involved_in
ISO
RNAcentral:URS000039ED8D_10090 (PMID:25642768)
RGD
PMID:25642768
NCBI chr 2:120,004,862...120,009,566
Ensembl chr 2:120,004,862...120,009,566
G
Il4
interleukin 4
acts_upstream_of_or_within
ISO
(PMID:18792410)
RGD
PMID:18792410
NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750
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Pf4
platelet factor 4
IDA
RGD
PMID:24986443
RGD:329901907
NCBI chr14:17,298,304...17,299,220
Ensembl chr14:17,298,308...17,299,365
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Rc3h1
ring finger and CCCH-type domains 1
involved_in
ISO
(PMID:25282160)
RGD
PMID:25282160
NCBI chr13:73,174,075...73,245,762
Ensembl chr13:73,173,946...73,238,839
G
Rc3h2
ring finger and CCCH-type domains 2
involved_in
ISO
(PMID:25282160)
RGD
PMID:25282160
NCBI chr 3:21,121,531...21,186,711
Ensembl chr 3:21,110,679...21,179,933
G
Smad7
SMAD family member 7
involved_in
IEA ISO
GO_REF:0000107 (PMID:25642768)
Ensembl RGD
PMID:25642768
GO_REF:0000107
NCBI chr18:68,988,429...69,016,774
Ensembl chr18:68,988,429...69,016,765
G
Tbx21
T-box transcription factor 21
involved_in
ISO
(PMID:21151104)
RGD
PMID:21151104
NCBI chr10:82,082,322...82,098,831
Ensembl chr10:82,082,322...82,098,831
G
Zbtb7b
zinc finger and BTB domain containing 7B
acts_upstream_of_or_within
ISO
MGI:3530739 (PMID:23034280)
RGD
PMID:23034280
NCBI chr 2:174,795,831...174,811,980
Ensembl chr 2:174,797,453...174,814,236
G
Zc3h12a
zinc finger CCCH type containing 12A
involved_in
ISS ISO
GO_REF:0000024 (PMID:25282160)
UniProt RGD
PMID:25282160
GO_REF:0000024
NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351
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Cd69
Cd69 molecule
involved_in
ISO
(PMID:24752896)
RGD
PMID:24752896
NCBI chr 4:162,725,446...162,733,364
Ensembl chr 4:162,725,446...162,733,542
G
Jak3
Janus kinase 3
involved_in
ISO IEA
(PMID:20696842) GO_REF:0000107
RGD Ensembl
PMID:20696842
GO_REF:0000107
NCBI chr16:18,386,330...18,398,542
Ensembl chr16:18,386,405...18,398,536
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Lgals1
galectin 1
involved_in
ISO IEA
(PMID:24752896) GO_REF:0000107
RGD Ensembl
PMID:24752896
GO_REF:0000107
NCBI chr 7:110,485,239...110,488,345
Ensembl chr 7:110,481,392...110,488,345
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Loxl3
lysyl oxidase-like 3
involved_in
ISO
(PMID:28065600)
RGD
PMID:28065600
NCBI chr 4:115,540,640...115,556,958
Ensembl chr 4:115,540,685...115,557,466
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Stat5a
signal transducer and activator of transcription 5A
involved_in
ISO IEA
(PMID:20696842) GO_REF:0000107
RGD Ensembl
PMID:20696842
GO_REF:0000107
NCBI chr10:85,785,537...85,809,869
Ensembl chr10:85,785,537...85,809,866
G
Tbx21
T-box transcription factor 21
involved_in
ISO
(PMID:21151104)
RGD
PMID:21151104
NCBI chr10:82,082,322...82,098,831
Ensembl chr10:82,082,322...82,098,831
G
Tnfsf18
TNF superfamily member 18
involved_in
ISO
(PMID:24107315)
RGD
PMID:24107315
NCBI chr13:73,833,478...73,907,249
Ensembl chr13:73,831,252...73,843,169
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Anxa1
annexin A1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:17008549)
UniProt Ensembl RGD
PMID:17008549
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:217,861,175...217,877,205
Ensembl chr 1:217,861,175...217,877,343
G
Ascl2
achaete-scute family bHLH transcription factor 2
involved_in
ISO
(PMID:24463518)
RGD
PMID:24463518
NCBI chr 1:198,148,999...198,151,406
Ensembl chr 1:198,148,999...198,151,406
G
Bcl6
BCL6, transcription repressor
acts_upstream_of_or_within
ISO
MGI:96559 (PMID:12594267)
RGD
PMID:12594267
NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389
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Hlx
H2.0-like homeobox
acts_upstream_of_or_within
ISO
MGI:105367|MGI:2182089 (PMID:16424184)
RGD
PMID:16424184
NCBI chr13:96,280,335...96,285,750
Ensembl chr13:96,280,339...96,285,750
G
Socs5
suppressor of cytokine signaling 5
involved_in
ISO
(PMID:12242343)
RGD
PMID:12242343
NCBI chr 6:7,481,039...7,512,644
Ensembl chr 6:7,481,095...7,514,834
G
Zfp35
zinc finger protein 35
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr18:15,268,852...15,284,334
Ensembl chr18:15,268,814...15,285,088
G
Rc3h1
ring finger and CCCH-type domains 1
acts_upstream_of_or_within
ISO
MGI:3581675 (PMID:15917799)
RGD
PMID:15917799
NCBI chr13:73,174,075...73,245,762
Ensembl chr13:73,173,946...73,238,839
G
Ada
adenosine deaminase
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857117 (PMID:11067867), (PMID:12163459), (PMID:16670300)
Ensembl RGD
PMID:11067867 PMID:12163459 PMID:16670300
GO_REF:0000107
NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088
G
Gli3
GLI family zinc finger 3
involved_in
ISO
(PMID:15855276)
RGD
PMID:15855276
NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
G
Ihh
Indian hedgehog signaling molecule
involved_in
ISO
(PMID:19109233)
RGD
PMID:19109233
NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532
G
Itpkb
inositol-trisphosphate 3-kinase B
acts_upstream_of_or_within
ISO
MGI:3039799 (PMID:15064401)
RGD
PMID:15064401
NCBI chr13:92,069,160...92,164,281
Ensembl chr13:92,069,216...92,162,004
G
Nkap
NFKB activating protein
involved_in
ISO ISS
(PMID:19409814) GO_REF:0000024
RGD UniProt
PMID:19409814
GO_REF:0000024
NCBI chr X:116,373,031...116,392,677
Ensembl chr X:116,372,839...116,394,945
G
Pnp
purine nucleoside phosphorylase
acts_upstream_of_or_within
ISO
(PMID:16964310)
RGD
PMID:16964310
NCBI chr15:24,170,607...24,178,269
Ensembl chr15:24,170,602...24,203,986
G
Rhoa
ras homolog family member A
involved_in
ISO
(PMID:25398325)
RGD
PMID:25398325
NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
G
Shh
sonic hedgehog signaling molecule
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:14764698) GO_REF:0000024
Ensembl RGD UniProt
PMID:14764698
GO_REF:0000024 GO_REF:0000107
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Syk
spleen associated tyrosine kinase
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:99613 (PMID:9275205)
Ensembl RGD
PMID:9275205
GO_REF:0000107
NCBI chr17:12,604,615...12,678,437
Ensembl chr17:12,604,619...12,661,410
G
Zap70
zeta chain of T cell receptor associated protein kinase 70
acts_upstream_of_or_within
ISO
MGI:2677447|MGI:3526403|MGI:99515 (PMID:7630421), (PMID:9208839), (PMID:9275205)
RGD
PMID:7630421 PMID:9208839 PMID:9275205
NCBI chr 9:38,989,750...39,011,701
Ensembl chr 9:38,989,750...39,011,700
G
Cd83
CD83 molecule
acts_upstream_of_or_within
ISO
MGI:3055293 (PMID:15322158)
RGD
PMID:15322158
NCBI chr17:20,887,309...20,907,009
Ensembl chr17:20,887,309...20,907,083
G
Foxp3
forkhead box P3
acts_upstream_of_or_within
ISO
(PMID:17028180)
RGD
PMID:17028180
NCBI chr X:14,908,494...14,924,994
Ensembl chr X:14,908,494...14,923,838
G
Nckap1l
NCK associated protein 1 like
involved_in
ISS ISO
GO_REF:0000024 (PMID:19015308)
UniProt RGD
PMID:19015308
GO_REF:0000024
NCBI chr 7:134,577,470...134,622,928
Ensembl chr 7:134,577,482...134,622,934
G
Sash3
SAM and SH3 domain containing 3
acts_upstream_of_or_within
ISO
MGI:3716944 (PMID:16227612)
RGD
PMID:16227612
NCBI chr X:127,326,815...127,341,521
Ensembl chr X:127,326,859...127,341,519
G
Socs1
suppressor of cytokine signaling 1
involved_in
IEA ISO ISS
GO_REF:0000107 (PMID:24880459) GO_REF:0000024
Ensembl RGD UniProt
PMID:24880459
GO_REF:0000024 GO_REF:0000107
NCBI chr10:4,882,651...4,884,342
Ensembl chr10:4,882,560...4,884,383
G
Tnfsf4
TNF superfamily member 4
involved_in
ISO
(PMID:20639485)
RGD
PMID:20639485
NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788
G
Zbtb7b
zinc finger and BTB domain containing 7B
involved_in
ISO
(PMID:24880459)
RGD
PMID:24880459
NCBI chr 2:174,795,831...174,811,980
Ensembl chr 2:174,797,453...174,814,236
G
Foxp3
forkhead box P3
acts_upstream_of_or_within
ISO
MGI:1857034|MGI:2654936|MGI:3696705 (PMID:12612578), (PMID:16275384), (PMID:16301745), (PMID:18573908)
RGD
PMID:12612578 PMID:16275384 PMID:16301745 PMID:18573908
NCBI chr X:14,908,494...14,924,994
Ensembl chr X:14,908,494...14,923,838
G
Gimap5
GTPase, IMAP family member 5
IMP
RGD
PMID:15778366
RGD:2303772
NCBI chr 4:77,693,417...77,701,025
Ensembl chr 4:77,687,564...77,703,086
G
Il2rg
interleukin 2 receptor subunit gamma
acts_upstream_of_or_within
ISO
MGI:1857455 (PMID:16227984)
RGD
PMID:16227984
NCBI chr X:66,395,330...66,399,026
Ensembl chr X:66,392,542...66,399,823
G
Klhl25
kelch-like family member 25
involved_in
ISO ISS
(PMID:34491895) GO_REF:0000024
RGD UniProt
PMID:34491895
GO_REF:0000024
NCBI chr 1:129,724,894...129,750,142
Ensembl chr 1:129,722,026...129,750,227
G
RT1-Da
RT1 class II, locus Da
involved_in
ISO
(PMID:28467828)
RGD
PMID:28467828
NCBI chr20:4,513,464...4,518,457
Ensembl chr20:4,512,911...4,518,455
G
RT1-Db1
RT1 class II, locus Db1
involved_in
ISO
(PMID:28467828)
RGD
PMID:28467828
NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258
G
Ifng
interferon gamma
involved_in
ISO
(PMID:20209097)
RGD
PMID:20209097
NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375
G
Lgals9
galectin 9
involved_in
ISO
(PMID:20209097)
RGD
PMID:20209097
NCBI chr10:63,907,018...63,930,224
Ensembl chr10:63,907,018...63,930,045
G
Cbfb
core-binding factor subunit beta
involved_in
ISO
(PMID:18258917)
RGD
PMID:18258917
NCBI chr19:33,049,162...33,092,752
Ensembl chr19:33,049,172...33,092,751
G
Lilrb4
leukocyte immunoglobulin like receptor B4
involved_in
ISO
(PMID:18420485)
RGD
PMID:18420485
NCBI chr 1:69,805,020...69,810,628
Ensembl chr 1:69,805,250...69,810,660
G
Nckap1l
NCK associated protein 1 like
involved_in
ISS ISO
GO_REF:0000024 (PMID:19015308)
UniProt RGD
PMID:19015308
GO_REF:0000024
NCBI chr 7:134,577,470...134,622,928
Ensembl chr 7:134,577,482...134,622,934
G
Runx1
RUNX family transcription factor 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:18258917)
UniProt RGD
PMID:18258917
GO_REF:0000024
NCBI chr11:31,839,880...32,074,427
Ensembl chr11:31,843,764...32,074,542
G
Runx3
RUNX family transcription factor 3
involved_in
ISO
(PMID:18258917)
RGD
PMID:18258917
NCBI chr 5:147,360,587...147,419,161
Ensembl chr 5:147,360,994...147,419,156
G
Sart1
spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP
involved_in
ISO
(PMID:10209962)
RGD
PMID:10209962
NCBI chr 1:202,690,472...202,699,136
Ensembl chr 1:202,690,459...202,699,136
G
Tnfsf9
TNF superfamily member 9
involved_in
IDA IBA
GO_REF:0000033
GO_Central RGD
PMID:19187795
GO_REF:0000033, RGD:2317344
NCBI chr 9:1,944,017...1,946,351
Ensembl chr 9:1,944,017...1,946,345
G
Gimap5
GTPase, IMAP family member 5
IMP
RGD
PMID:11859104
RGD:625608
NCBI chr 4:77,693,417...77,701,025
Ensembl chr 4:77,687,564...77,703,086
G
Lck
LCK proto-oncogene, Src family tyrosine kinase
acts_upstream_of_or_within
ISO
MGI:1857211 (PMID:7807014)
RGD
PMID:7807014
NCBI chr 5:141,888,318...141,916,945
Ensembl chr 5:141,888,326...141,903,794
G
Lef1
lymphoid enhancer binding factor 1
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:23562159) GO_REF:0000107
UniProt RGD Ensembl
PMID:23562159
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794
G
Nckap1l
NCK associated protein 1 like
involved_in
ISS ISO
GO_REF:0000024 (PMID:19015308)
UniProt RGD
PMID:19015308
GO_REF:0000024
NCBI chr 7:134,577,470...134,622,928
Ensembl chr 7:134,577,482...134,622,934
G
Ptprc
protein tyrosine phosphatase, receptor type, C
acts_upstream_of_or_within
ISO
MGI:2181288 (PMID:7807014)
RGD
PMID:7807014
NCBI chr13:49,596,193...49,708,283
Ensembl chr13:49,596,193...49,708,692
G
Sox13
SRY-box transcription factor 13
involved_in
ISO
(PMID:23562159)
RGD
PMID:23562159
NCBI chr13:44,831,097...44,875,522
Ensembl chr13:44,831,085...44,875,762
G
Sox4
SRY-box transcription factor 4
involved_in
ISO
(PMID:23562159)
RGD
PMID:23562159
NCBI chr17:35,667,809...35,672,515
Ensembl chr17:35,667,537...35,673,665
G
Stat5a
signal transducer and activator of transcription 5A
acts_upstream_of_or_within
ISO
MGI:103035 (PMID:15294943)
RGD
PMID:15294943
NCBI chr10:85,785,537...85,809,869
Ensembl chr10:85,785,537...85,809,866
G
Stat5b
signal transducer and activator of transcription 5B
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:103036 (PMID:15294943)
Ensembl RGD
PMID:15294943
GO_REF:0000107
NCBI chr10:85,704,841...85,775,856
Ensembl chr10:85,705,670...85,775,668
G
Syk
spleen associated tyrosine kinase
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857421|MGI:2384078 (PMID:7477352), (PMID:8790395)
Ensembl RGD
PMID:7477352 PMID:8790395
GO_REF:0000107
NCBI chr17:12,604,615...12,678,437
Ensembl chr17:12,604,619...12,661,410
G
Cd46
CD46 molecule
involved_in
ISO
(PMID:12540904)
RGD
PMID:12540904
NCBI chr13:106,575,586...106,606,325
Ensembl chr13:106,574,858...106,660,445
G
Il23a
interleukin 23 subunit alpha
involved_in
ISO
(PMID:14688363)
RGD
PMID:14688363
NCBI chr 7:721,809...723,923
Ensembl chr 7:721,809...723,923
G
Pck1
phosphoenolpyruvate carboxykinase 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:29230018)
UniProt RGD
PMID:29230018
GO_REF:0000024
NCBI chr 3:161,930,256...161,936,205
Ensembl chr 3:161,930,256...161,936,191
G
RT1-Da
RT1 class II, locus Da
involved_in
ISO
(PMID:27591323)
RGD
PMID:27591323
NCBI chr20:4,513,464...4,518,457
Ensembl chr20:4,512,911...4,518,455
G
RT1-Db1
RT1 class II, locus Db1
involved_in
ISO
(PMID:27591323)
RGD
PMID:27591323
NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258
G
Tnfsf4
TNF superfamily member 4
involved_in
ISO
(PMID:18713990)
RGD
PMID:18713990
NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788
G
Ap3b1
adaptor related protein complex 3 subunit beta 1
acts_upstream_of_or_within
ISO
MGI:1856989 (PMID:14557411)
RGD
PMID:14557411
NCBI chr 2:25,600,069...25,800,937
Ensembl chr 2:25,600,040...25,800,935
G
Ap3d1
adaptor related protein complex 3 subunit delta 1
acts_upstream_of_or_within
ISO
MGI:1856083 (PMID:14557411)
RGD
PMID:14557411
NCBI chr 7:8,970,249...9,005,651
Ensembl chr 7:8,970,291...9,005,643
G
Cd1d1
CD1d1 molecule
acts_upstream_of_or_within
ISO
MGI:2180711|MGI:2180713 (PMID:10201995), (PMID:9133426)
RGD
PMID:9133426 PMID:10201995
NCBI chr 2:172,423,582...172,427,089
Ensembl chr 2:172,423,582...172,427,089
G
Tgfbr2
transforming growth factor, beta receptor 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2183502|MGI:2386448 (PMID:16973387)
Ensembl RGD
PMID:16973387
GO_REF:0000107
NCBI chr 8:115,794,537...115,883,615
Ensembl chr 8:115,794,537...115,883,228
G
Zbtb1
zinc finger and BTB domain containing 1
involved_in
ISO
(PMID:22753936)
RGD
PMID:22753936
NCBI chr 6:95,096,838...95,125,811
Ensembl chr 6:95,096,387...95,118,996
G
Ambra1
autophagy and beclin 1 regulator 1
involved_in
ISO
(PMID:30513302)
RGD
PMID:30513302
NCBI chr 3:77,700,936...77,890,221
Ensembl chr 3:77,700,936...77,890,221
G
Bcl6
BCL6, transcription repressor
involved_in
ISO
(PMID:20935202), (PMID:22387553)
RGD
PMID:20935202 PMID:22387553
NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389
G
Btn2a2
butyrophilin, subfamily 2, member A2
acts_upstream_of_or_within
ISO
(PMID:23589618)
RGD
PMID:23589618
NCBI chr17:41,620,807...41,632,621
Ensembl chr17:41,620,839...41,632,618
G
Carmil2
capping protein regulator and myosin 1 linker 2
acts_upstream_of_or_within
ISO
MGI:4462559|MGI:5547539 (PMID:23793062)
RGD
PMID:23793062
NCBI chr19:33,571,255...33,586,783
Ensembl chr19:33,574,257...33,586,965
G
Cd46
CD46 molecule
involved_in
ISO
(PMID:12540904)
RGD
PMID:12540904
NCBI chr13:106,575,586...106,606,325
Ensembl chr13:106,574,858...106,660,445
G
Dusp10
dual specificity phosphatase 10
involved_in
ISO
(PMID:22387553)
RGD
PMID:22387553
NCBI chr13:95,613,716...95,651,716
Ensembl chr13:95,614,292...95,651,716
G
Foxo3
forkhead box O3
involved_in
ISO
(PMID:30513302)
RGD
PMID:30513302
NCBI chr20:45,669,708...45,764,606
Ensembl chr20:45,672,995...45,764,561
G
Foxp3
forkhead box P3
involved_in acts_upstream_of_or_within
ISO
(PMID:30513302) MGI:2654936 (PMID:12522256), (PMID:15100250), (PMID:15780990), (PMID:16769892), (PMID:17028180)
RGD
PMID:12522256 PMID:15100250 PMID:15780990 PMID:16769892 PMID:17028180 PMID:30513302 More...
NCBI chr X:14,908,494...14,924,994
Ensembl chr X:14,908,494...14,923,838
G
Il2
interleukin 2
IDA
RGD
PMID:6233372
RGD:1600097
NCBI chr 2:120,004,862...120,009,566
Ensembl chr 2:120,004,862...120,009,566
G
Il4i1
interleukin 4 induced 1
involved_in
ISO
(PMID:25778793)
RGD
PMID:25778793
NCBI chr 1:95,299,457...95,324,564
Ensembl chr 1:95,295,601...95,324,562
G
Kat5
lysine acetyltransferase 5
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:24835996) GO_REF:0000107
UniProt RGD Ensembl
PMID:24835996
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:202,895,751...202,903,178
Ensembl chr 1:202,895,751...202,903,458
G
Lgals9
galectin 9
involved_in
ISO
(PMID:25065622)
RGD
PMID:25065622
NCBI chr10:63,907,018...63,930,224
Ensembl chr10:63,907,018...63,930,045
G
Lilrb4
leukocyte immunoglobulin like receptor B4
involved_in
ISO
(PMID:20935202), (PMID:22387553)
RGD
PMID:20935202 PMID:22387553
NCBI chr 1:69,805,020...69,810,628
Ensembl chr 1:69,805,250...69,810,660
G
Mir214
microRNA 214
IMP
RGD
PMID:30287503
RGD:38549580
NCBI chr13:74,588,374...74,588,481
Ensembl chr13:74,588,372...74,588,481
G
RT1-M3-1
RT1 class Ib, locus M3, gene 1
involved_in
ISO
(PMID:20448110)
RGD
PMID:20448110
NCBI chr20:1,323,976...1,328,126
Ensembl chr20:1,287,521...1,328,117
G
Socs1
suppressor of cytokine signaling 1
involved_in
ISO IEA
(PMID:22387553) GO_REF:0000107
RGD Ensembl
PMID:22387553
GO_REF:0000107
NCBI chr10:4,882,651...4,884,342
Ensembl chr10:4,882,560...4,884,383
G
Sox12
SRY-box transcription factor 12
involved_in
ISO
(PMID:30190287)
RGD
PMID:30190287
NCBI chr 3:140,859,499...140,860,518
Ensembl chr 3:140,856,579...140,860,975
G
Tgfb1
transforming growth factor, beta 1
involved_in
ISO
(PMID:25065622)
RGD
PMID:25065622
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
G
Vsir
V-set immunoregulatory receptor
involved_in
ISO
(PMID:24691993)
RGD
PMID:24691993
NCBI chr20:28,281,582...28,307,262
Ensembl chr20:28,281,596...28,303,878
G
Ada
adenosine deaminase
acts_upstream_of_or_within
ISO
MGI:1857117|MGI:2683027 (PMID:7731963), (PMID:9478961)
RGD
PMID:7731963 PMID:9478961
NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088
G
Bad
BCL2-associated agonist of cell death
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3029528 (PMID:12431371)
Ensembl RGD
PMID:12431371
GO_REF:0000107
NCBI chr 1:204,133,502...204,142,829
Ensembl chr 1:204,131,501...204,142,823
G
Cd27
CD27 molecule
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 4:158,030,700...158,035,862
Ensembl chr 4:158,030,703...158,035,592
G
Cd74
CD74 molecule
acts_upstream_of_or_within
ISO
MGI:1927205|MGI:1927530 (PMID:7679955), (PMID:8598040), (PMID:9432982)
RGD
PMID:7679955 PMID:8598040 PMID:9432982
NCBI chr18:54,256,757...54,266,003
Ensembl chr18:54,256,778...54,266,003
G
Cyld
CYLD lysine 63 deubiquitinase
acts_upstream_of_or_within
ISO
MGI:3664438 (PMID:16501569)
RGD
PMID:16501569
NCBI chr19:18,310,632...18,373,696
Ensembl chr19:18,314,019...18,373,658
G
Gata3
GATA binding protein 3
involved_in
ISO
(PMID:20696860)
RGD
PMID:20696860
NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
G
Il12a
interleukin 12A
acts_upstream_of_or_within
ISO
MGI:1916927 (PMID:22968459)
RGD
PMID:22968459
NCBI chr 2:152,965,769...152,973,035
Ensembl chr 2:152,965,769...152,972,734
G
Il1rl2
interleukin 1 receptor-like 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:22968459)
Ensembl RGD
PMID:22968459
GO_REF:0000107
NCBI chr 9:42,591,658...42,639,351
Ensembl chr 9:42,591,934...42,636,667
G
Il2
interleukin 2
IDA
RGD
PMID:9352365
RGD:1600138
NCBI chr 2:120,004,862...120,009,566
Ensembl chr 2:120,004,862...120,009,566
G
Il2ra
interleukin 2 receptor subunit alpha
IMP
RGD
PMID:9352365
RGD:1600138
NCBI chr17:66,849,974...66,898,665
Ensembl chr17:66,849,974...66,898,697
G
Il36b
interleukin 36, beta
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:96539 (PMID:22968459)
GO_Central RGD
PMID:22968459
GO_REF:0000033
NCBI chr 3:7,024,881...7,030,388
Ensembl chr 3:7,021,973...7,031,619
G
Il4
interleukin 4
involved_in
ISO
(PMID:20554961)
RGD
PMID:20554961
NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750
G
Il7
interleukin 7
involved_in acts_upstream_of_or_within
IEA ISO ISS
GO_REF:0000107 (PMID:12431371) GO_REF:0000024
Ensembl RGD UniProt
PMID:12431371
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:94,235,219...94,280,075
Ensembl chr 2:94,234,766...94,280,075
G
Mdk
midkine
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:28183532) GO_REF:0000107
UniProt RGD Ensembl
PMID:28183532
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:77,901,134...77,903,997
Ensembl chr 3:77,901,158...77,903,130
G
Pik3r6
phosphoinositide-3-kinase, regulatory subunit 6
involved_in
ISO
(PMID:12707323)
RGD
PMID:12707323
NCBI chr10:53,203,930...53,255,229
Ensembl chr10:53,205,496...53,255,243
G
Ptprc
protein tyrosine phosphatase, receptor type, C
acts_upstream_of_or_within
ISO
MGI:1857277 (PMID:8666928)
RGD
PMID:8666928
NCBI chr13:49,596,193...49,708,283
Ensembl chr13:49,596,193...49,708,692
G
Rag1
recombination activating 1
involved_in
ISO
(PMID:1547488)
RGD
PMID:1547488
NCBI chr 3:87,917,061...87,928,158
Ensembl chr 3:87,917,004...87,928,291
G
Rhoh
ras homolog family member H
involved_in
ISO
(PMID:22850876)
RGD
PMID:22850876
NCBI chr14:42,341,135...42,371,971
Ensembl chr14:42,337,751...42,386,369
G
RT1-Ba
RT1 class II, locus Ba
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:8598041)
Ensembl RGD
PMID:8598041
GO_REF:0000107
NCBI chr20:4,575,134...4,579,727
Ensembl chr20:4,575,134...4,579,744
G
RT1-DMa
RT1 class II, locus DMa
acts_upstream_of_or_within
ISO
MGI:1861933|MGI:2384509|MGI:2652160 (PMID:8598040), (PMID:8598041), (PMID:8638109), (PMID:9432982)
RGD
PMID:8598040 PMID:8598041 PMID:8638109 PMID:9432982
NCBI chr20:4,707,028...4,710,432
Ensembl chr20:4,707,028...4,710,432
G
Wnt10b
Wnt family member 10B
acts_upstream_of_or_within
ISO
(PMID:19723499)
RGD
PMID:19723499
NCBI chr 7:129,922,088...129,927,892
Ensembl chr 7:129,922,088...129,927,892
G
Xbp1
X-box binding protein 1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:11460154)
UniProt Ensembl RGD
PMID:11460154
GO_REF:0000024 GO_REF:0000107
NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
G
Zap70
zeta chain of T cell receptor associated protein kinase 70
acts_upstream_of_or_within
ISO
(PMID:7630421) MGI:2677447|MGI:3526403 (PMID:9208839)
RGD
PMID:7630421 PMID:9208839
NCBI chr 9:38,989,750...39,011,701
Ensembl chr 9:38,989,750...39,011,700
G
Zbtb1
zinc finger and BTB domain containing 1
involved_in
ISO
(PMID:22201126)
RGD
PMID:22201126
NCBI chr 6:95,096,838...95,125,811
Ensembl chr 6:95,096,387...95,118,996
G
Zmiz1
zinc finger, MIZ-type containing 1
involved_in
ISO
(PMID:26522984)
RGD
PMID:26522984
NCBI chr16:1,027,083...1,232,616
Ensembl chr16:1,027,325...1,232,597
G
Ada
adenosine deaminase
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857117|MGI:2683027 (PMID:11067867), (PMID:11435465), (PMID:12163459), (PMID:16670300)
Ensembl RGD
PMID:11067867 PMID:11435465 PMID:12163459 PMID:16670300
GO_REF:0000107
NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088
G
Adam8
ADAM metallopeptidase domain 8
involved_in
ISO
(PMID:20856819)
RGD
PMID:20856819
NCBI chr 1:194,776,559...194,789,330
Ensembl chr 1:194,770,060...194,788,801
G
Egr3
early growth response 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:21737317)
Ensembl RGD
PMID:21737317
GO_REF:0000107
NCBI chr15:45,150,335...45,156,052
Ensembl chr15:45,150,567...45,154,627
G
Ihh
Indian hedgehog signaling molecule
involved_in
ISO
(PMID:19109233)
RGD
PMID:19109233
NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532
G
Il2rg
interleukin 2 receptor subunit gamma
acts_upstream_of_or_within
ISO
MGI:1857455|MGI:2429736 (PMID:9252128), (PMID:9916699)
RGD
PMID:9252128 PMID:9916699
NCBI chr X:66,395,330...66,399,026
Ensembl chr X:66,392,542...66,399,823
G
Il7r
interleukin 7 receptor
acts_upstream_of_or_within
ISO
MGI:1857198 (PMID:9215626)
RGD
PMID:9215626
NCBI chr 2:58,452,393...58,477,757
Ensembl chr 2:58,454,217...58,477,757
G
Rasgrp1
RAS guanyl releasing protein 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:11017103)
Ensembl RGD
PMID:11017103
GO_REF:0000107
NCBI chr 3:104,168,549...104,230,107
Ensembl chr 3:104,170,013...104,230,056
G
Shh
sonic hedgehog signaling molecule
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:19109233) GO_REF:0000107
UniProt RGD Ensembl
PMID:19109233
GO_REF:0000024 GO_REF:0000107
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Vnn1
vanin 1
involved_in
ISO
(PMID:8934567)
RGD
PMID:8934567
NCBI chr 1:21,537,084...21,547,395
Ensembl chr 1:21,537,094...21,547,395
G
Anxa1
annexin A1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:17008549)
UniProt Ensembl RGD
PMID:17008549
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:217,861,175...217,877,205
Ensembl chr 1:217,861,175...217,877,343
G
Ccl19
C-C motif chemokine ligand 19
involved_in
ISO
(PMID:15845453)
RGD
PMID:15845453
NCBI chr 5:56,963,364...56,965,308
Ensembl chr 5:56,963,364...56,965,308
G
Hlx
H2.0-like homeobox
acts_upstream_of_or_within
ISO
MGI:105367|MGI:2182089 (PMID:16424184)
RGD
PMID:16424184
NCBI chr13:96,280,335...96,285,750
Ensembl chr13:96,280,339...96,285,750
G
Ripk2
receptor-interacting serine-threonine kinase 2
acts_upstream_of_or_within
ISO
MGI:2446070 (PMID:11894097)
RGD
PMID:11894097
NCBI chr 5:29,630,806...29,662,804
Ensembl chr 5:29,631,570...29,662,657
G
Socs5
suppressor of cytokine signaling 5
involved_in
ISO
(PMID:12242343)
RGD
PMID:12242343
NCBI chr 6:7,481,039...7,512,644
Ensembl chr 6:7,481,095...7,514,834
G
Malt1
MALT1 paracaspase
involved_in
ISO
(PMID:25282160)
RGD
PMID:25282160
NCBI chr18:58,942,282...58,996,318
Ensembl chr18:58,942,299...58,994,260
G
Mir326
microRNA 326
acts_upstream_of_or_within
ISO
(PMID:19838199)
RGD
PMID:19838199
NCBI chr 1:153,854,029...153,854,123
Ensembl chr 1:153,854,029...153,854,123
G
Nfkbid
NFKB inhibitor delta
involved_in
ISO
(PMID:25282160)
RGD
PMID:25282160
NCBI chr 1:85,679,353...85,690,415
Ensembl chr 1:85,680,861...85,690,447
G
Nfkbiz
NFKB inhibitor zeta
involved_in
ISO
(PMID:25282160)
RGD
PMID:25282160
NCBI chr11:44,782,676...44,810,722
Ensembl chr11:44,782,676...44,810,723
G
Nlrp3
NLR family, pyrin domain containing 3
involved_in
ISO
(PMID:26098997)
RGD
PMID:26098997
NCBI chr10:44,326,770...44,353,814
Ensembl chr10:44,328,566...44,352,811
G
Brd2
bromodomain containing 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:28262505)
UniProt RGD
PMID:28262505
GO_REF:0000024
NCBI chr20:4,727,078...4,735,389
Ensembl chr20:4,728,151...4,735,388
G
Brd4
bromodomain containing 4
involved_in
ISO
(PMID:28262505)
RGD
PMID:28262505
NCBI chr 7:11,216,446...11,296,029
Ensembl chr 7:11,216,446...11,295,539
G
Ep300
E1A binding protein p300
involved_in
ISO
(PMID:28262505)
RGD
PMID:28262505
NCBI chr 7:113,108,476...113,178,529
Ensembl chr 7:113,106,247...113,136,088 Ensembl chr 7:113,106,247...113,136,088
G
Il23a
interleukin 23 subunit alpha
involved_in
IBA ISO
GO_REF:0000033 (PMID:19501566)
GO_Central RGD
PMID:19501566
GO_REF:0000033
NCBI chr 7:721,809...723,923
Ensembl chr 7:721,809...723,923
G
Opa1
OPA1, mitochondrial dynamin like GTPase
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:36171294) GO_REF:0000107
UniProt RGD Ensembl
PMID:36171294
GO_REF:0000024 GO_REF:0000107
NCBI chr11:71,108,100...71,185,170
Ensembl chr11:71,109,873...71,185,109
G
Il18
interleukin 18
involved_in
IEA ISO
GO_REF:0000107 (PMID:12829194)
Ensembl RGD
PMID:12829194
GO_REF:0000107
NCBI chr 8:50,904,630...50,932,887
Ensembl chr 8:50,906,960...50,932,887
G
Il4r
interleukin 4 receptor
acts_upstream_of_or_within
ISO
MGI:96109 (PMID:16424184)
RGD
PMID:16424184
NCBI chr 1:180,115,061...180,139,981
Ensembl chr 1:180,115,120...180,139,980
G
Il6
interleukin 6
acts_upstream_of_or_within
ISO
(PMID:12594267)
RGD
PMID:12594267
NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
G
Nlrp3
NLR family, pyrin domain containing 3
involved_in
ISO
(PMID:26098997)
RGD
PMID:26098997
NCBI chr10:44,326,770...44,353,814
Ensembl chr10:44,328,566...44,352,811
G
Prkcz
protein kinase C, zeta
involved_in
ISS ISO
GO_REF:0000024 (PMID:15987782)
UniProt RGD
PMID:15987782
GO_REF:0000024
NCBI chr 5:165,817,786...165,930,386
Ensembl chr 5:165,819,466...165,930,367
G
Rara
retinoic acid receptor, alpha
involved_in
ISO
(PMID:18416830)
RGD
PMID:18416830
NCBI chr10:83,883,490...83,928,932
Ensembl chr10:83,893,384...83,928,142
G
Tnfsf4
TNF superfamily member 4
involved_in
ISO
(PMID:18354165)
RGD
PMID:18354165
NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788
G
Shb
SH2 domain containing adaptor protein B
acts_upstream_of_or_within
ISO
MGI:3721903 (PMID:24645804)
RGD
PMID:24645804
NCBI chr 5:59,678,066...59,785,443
Ensembl chr 5:59,678,216...59,785,538
G
Ankle1
ankyrin repeat and LEM domain containing 1
NOT|involved_in
ISO
(PMID:27010503)
RGD
PMID:27010503
NCBI chr16:18,076,413...18,082,356
Ensembl chr16:18,076,492...18,083,729
G
Sh3rf1
SH3 domain containing ring finger 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:27084103)
UniProt RGD
PMID:27084103
GO_REF:0000024
NCBI chr16:28,735,522...28,901,261
Ensembl chr16:28,735,440...28,901,644
G
Kcnk18
potassium two pore domain channel subfamily K member 18
involved_in
ISS ISO
GO_REF:0000024 (PMID:34702947)
UniProt RGD
PMID:34702947
GO_REF:0000024
NCBI chr 1:258,374,671...258,388,945
Ensembl chr 1:258,374,671...258,388,945
G
Zbtb7b
zinc finger and BTB domain containing 7B
acts_upstream_of_or_within
ISO
MGI:3817628 (PMID:18776904)
RGD
PMID:18776904
NCBI chr 2:174,795,831...174,811,980
Ensembl chr 2:174,797,453...174,814,236
G
Prdm1
PR/SET domain 1
involved_in
ISO
(PMID:27102484)
RGD
PMID:27102484
NCBI chr20:47,959,858...47,981,488
Ensembl chr20:47,959,858...47,981,488
G
Zfp683
zinc finger protein 683
involved_in
ISO
(PMID:27102484)
RGD
PMID:27102484
NCBI chr 5:146,277,972...146,285,856
Ensembl chr 5:146,278,978...146,285,000
G
Egr3
early growth response 3
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:21737317)
Ensembl RGD
PMID:21737317
GO_REF:0000107
NCBI chr15:45,150,335...45,156,052
Ensembl chr15:45,150,567...45,154,627
G
Rorc
RAR-related orphan receptor C
acts_upstream_of_or_within
ISO
(PMID:21737317)
RGD
PMID:21737317
NCBI chr 2:182,009,707...182,034,910
Ensembl chr 2:182,009,286...182,034,907
G
Sox13
SRY-box transcription factor 13
acts_upstream_of_or_within
ISO
(PMID:21737317)
RGD
PMID:21737317
NCBI chr13:44,831,097...44,875,522
Ensembl chr13:44,831,085...44,875,762
G
Tcf7
transcription factor 7
involved_in
ISO
(PMID:23562159)
RGD
PMID:23562159
NCBI chr10:36,423,443...36,454,350
Ensembl chr10:36,423,445...36,453,535
G
Bcl6
BCL6, transcription repressor
acts_upstream_of_or_within
ISO
MGI:2158436 (PMID:15240675)
RGD
PMID:15240675
NCBI chr11:76,854,090...76,877,389
Ensembl chr11:76,854,090...76,877,389
G
Prdm1
PR/SET domain 1
involved_in
ISO
(PMID:27102484)
RGD
PMID:27102484
NCBI chr20:47,959,858...47,981,488
Ensembl chr20:47,959,858...47,981,488
G
Zfp683
zinc finger protein 683
involved_in
ISO
(PMID:27102484)
RGD
PMID:27102484
NCBI chr 5:146,277,972...146,285,856
Ensembl chr 5:146,278,978...146,285,000
G
Foxn1
forkhead box N1
involved_in
ISO
(PMID:24184560)
RGD
PMID:24184560
NCBI chr10:63,251,400...63,273,710
Ensembl chr10:63,251,400...63,273,710
G
Tox
thymocyte selection-associated high mobility group box
involved_in
ISO
(PMID:18195075)
RGD
PMID:18195075
NCBI chr 5:19,874,994...20,171,272
Ensembl chr 5:19,874,467...20,171,272
G
Cd28
Cd28 molecule
acts_upstream_of_or_within
ISO
MGI:96756|MGI:98725 (PMID:21245484)
RGD
PMID:21245484
NCBI chr 9:62,166,324...62,194,674
Ensembl chr 9:62,166,192...62,194,685
G
Dicer1
dicer 1 ribonuclease III
acts_upstream_of_or_within
ISO
(PMID:18725527)
RGD
PMID:18725527
NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
G
Drosha
drosha ribonuclease III
acts_upstream_of_or_within
ISO
(PMID:18725527)
RGD
PMID:18725527
NCBI chr 2:61,864,886...61,976,688
Ensembl chr 2:61,864,970...61,976,688
G
Fanca
FA complementation group A
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:2674094 (PMID:24501220)
GO_Central RGD
PMID:24501220
GO_REF:0000033
NCBI chr19:51,304,126...51,362,586
Ensembl chr19:51,304,021...51,362,527
G
Fancd2
FA complementation group D2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2673422 (PMID:24501220)
Ensembl RGD
PMID:24501220
GO_REF:0000107
NCBI chr 4:146,679,014...146,743,422
Ensembl chr 4:146,679,179...146,743,412
G
Kat2a
lysine acetyltransferase 2A
involved_in
ISO
(PMID:28424240)
RGD
PMID:28424240
NCBI chr10:85,632,216...85,640,561
Ensembl chr10:85,632,216...85,640,166
G
Lck
LCK proto-oncogene, Src family tyrosine kinase
acts_upstream_of_or_within
ISO
MGI:88327 (PMID:21245484)
RGD
PMID:21245484
NCBI chr 5:141,888,318...141,916,945
Ensembl chr 5:141,888,326...141,903,794
G
Sh2b3
SH2B adaptor protein 3
IMP
RGD
PMID:25776069
RGD:13442483
NCBI chr12:34,731,934...34,753,617
Ensembl chr12:34,731,911...34,753,616
G
Tgfb1
transforming growth factor, beta 1
acts_upstream_of_or_within
ISO
MGI:88327 (PMID:21245484)
RGD
PMID:21245484
NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847
G
Ada
adenosine deaminase
IMP
RGD
PMID:3876160
RGD:152995412
NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088
G
Adrm1
ADRM1 26S proteasome ubiquitin receptor
involved_in
ISO
(PMID:21048919)
RGD
PMID:21048919
NCBI chr 3:167,265,435...167,270,197
Ensembl chr 3:167,265,296...167,270,195
G
Ankle1
ankyrin repeat and LEM domain containing 1
NOT|involved_in
ISO
(PMID:27010503)
RGD
PMID:27010503
NCBI chr16:18,076,413...18,082,356
Ensembl chr16:18,076,492...18,083,729
G
Clptm1
CLPTM1 regulator of GABA type A receptor forward trafficking
involved_in
ISO
(PMID:9218588)
RGD
PMID:9218588
NCBI chr 1:79,289,478...79,321,079
Ensembl chr 1:79,289,477...79,321,092
G
Foxn1
forkhead box N1
acts_upstream_of_or_within
ISO
MGI:5297717 (PMID:22072979)
RGD
PMID:22072979
NCBI chr10:63,251,400...63,273,710
Ensembl chr10:63,251,400...63,273,710
G
Lgals9
galectin 9
NOT|involved_in
ISO
(PMID:25065622)
RGD
PMID:25065622
NCBI chr10:63,907,018...63,930,224
Ensembl chr10:63,907,018...63,930,045
G
Sos1
SOS Ras/Rac guanine nucleotide exchange factor 1
acts_upstream_of_or_within
ISO
MGI:98355 (PMID:24043312)
RGD
PMID:24043312
NCBI chr 6:14,533,870...14,613,348
Ensembl chr 6:14,533,360...14,611,107
G
Sos2
SOS Ras/Rho guanine nucleotide exchange factor 2
acts_upstream_of_or_within
ISO
MGI:98354 (PMID:24043312)
RGD
PMID:24043312
NCBI chr 6:88,042,966...88,156,140
Ensembl chr 6:88,042,966...88,156,692
G
Zeb1
zinc finger E-box binding homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857515|MGI:1857799 (PMID:9126927), (PMID:9389660)
Ensembl RGD
PMID:9126927 PMID:9389660
GO_REF:0000107
NCBI chr17:51,948,948...52,116,018
Ensembl chr17:51,948,948...52,115,214
G
Il27
interleukin 27
involved_in
ISO IBA
(PMID:12734330) GO_REF:0000033
RGD GO_Central
PMID:12734330
GO_REF:0000033
NCBI chr 1:181,173,108...181,178,720
Ensembl chr 1:181,173,372...181,178,582
G
Ccl20
C-C motif chemokine ligand 20
NOT|involved_in
ISO
(PMID:19050256)
RGD
PMID:19050256
NCBI chr 9:84,389,031...84,391,629
Ensembl chr 9:84,388,904...84,391,629
G
Ccr6
C-C motif chemokine receptor 6
NOT|involved_in
ISO
(PMID:19050256)
RGD
PMID:19050256
NCBI chr 1:52,474,477...52,508,301
Ensembl chr 1:52,474,168...52,498,603
G
Mir301a
microRNA 301a
acts_upstream_of_or_within
ISO
(PMID:22517757)
RGD
PMID:22517757
NCBI chr10:71,925,336...71,925,435
Ensembl chr10:71,925,336...71,925,435
G
Gata3
GATA binding protein 3
acts_upstream_of_or_within
ISO
MGI:3487291 (PMID:18776904)
RGD
PMID:18776904
NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
G
Il12rb2
interleukin 12 receptor subunit beta 2
NAS
RGD
PMID:10651948
RGD:1331512
NCBI chr 4:96,426,396...96,515,251
Ensembl chr 4:96,426,842...96,515,289
G
RT1-Da
RT1 class II, locus Da
involved_in
ISO
(PMID:15322540)
RGD
PMID:15322540
NCBI chr20:4,513,464...4,518,457
Ensembl chr20:4,512,911...4,518,455
G
RT1-Db1
RT1 class II, locus Db1
involved_in
ISO
(PMID:15322540)
RGD
PMID:15322540
NCBI chr20:4,548,664...4,558,237
Ensembl chr20:4,548,666...4,558,258
G
Zbtb7b
zinc finger and BTB domain containing 7B
acts_upstream_of_or_within
ISO
MGI:3817628 (PMID:18776904)
RGD
PMID:18776904
NCBI chr 2:174,795,831...174,811,980
Ensembl chr 2:174,797,453...174,814,236
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all