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ONTOLOGY REPORT - ANNOTATIONS


Term:pole plasm
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Accession:GO:0045495 term browser browse the term
Definition:Differentiated cytoplasm associated with a pole (animal, vegetal, anterior, or posterior) of an oocyte, egg or early embryo.
Synonyms:exact_synonym: polar plasm
 narrow_synonym: germ plasm
 never_in_taxon: NCBITaxon:4751 ! Fungi



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P granule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07042226.1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr  X:144,806,986...144,812,552 JBrowse link
G Carhsp1 calcium regulated heat stable protein 1 located_in ISS
ISO
GO_REF:0000024
(MGI:5320273|PMID:21078874)
UniProt
RGD
PMID:21078874 GO_REF:0000024 MGI:5320273 NCBI chr10:6,946,036...6,960,556
Ensembl chr10:6,946,959...7,020,019
JBrowse link
G Ddx3 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  Y:1,115,095...1,135,754
Ensembl chr  Y:1,116,309...1,135,706
JBrowse link
G Ddx3x DEAD-box helicase 3, X-linked is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:9,479,532...9,493,455
Ensembl chr  X:9,479,532...9,493,168
JBrowse link
G Ddx3y DEAD-box helicase 3, Y-linked is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:98,520,538...98,523,707
Ensembl chr13:98,520,201...98,524,176
JBrowse link
G Ddx4 DEAD-box helicase 4 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:44,227,946...44,282,867
Ensembl chr 2:44,227,946...44,282,723
JBrowse link
G Helz helicase with zinc finger is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:92,479,403...92,645,234
Ensembl chr10:92,501,518...92,638,383
JBrowse link
G Henmt1 HEN methyltransferase 1 located_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 2:196,585,732...196,603,700
Ensembl chr 2:196,586,797...196,599,738
JBrowse link
G LOC687679 similar to small nuclear ribonucleoprotein polypeptide G is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:87,982,659...87,983,067
Ensembl chr 1:87,982,626...87,983,118
JBrowse link
G Mael maelstrom spermatogenic transposon silencer located_in
is_active_in
ISO
IBA
(MGI:3655410|PMID:16787967), (MGI:3813746|PMID:18694567)
PMID:21873635
RGD PMID:16787967 PMID:18694567 PMID:21873635 MGI:3655410 MGI:3813746, RGD:13792537 NCBI chr13:78,457,073...78,496,657
Ensembl chr13:78,457,073...78,496,657
JBrowse link
G Mov10 Mov10 RISC complex RNA helicase is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:192,292,041...192,315,142
Ensembl chr 2:192,293,470...192,315,083
JBrowse link
G Mov10l1 Mov10 like RISC complex RNA helicase 1 located_in
is_active_in
ISO
IBA
(MGI:4457283|PMID:20534472)
PMID:21873635
RGD PMID:20534472 PMID:21873635 MGI:4457283, RGD:13792537 NCBI chr 7:120,070,171...120,135,406
Ensembl chr 7:120,070,135...120,134,765
JBrowse link
G Piwil1 piwi-like RNA-mediated gene silencing 1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:27,949,743...27,970,645
Ensembl chr12:27,949,744...27,970,580
JBrowse link
G Piwil2 piwi-like RNA-mediated gene silencing 2 located_in
is_active_in
ISO
IBA
(MGI:3815367|PMID:18922463), (MGI:4443217|PMID:20439430)
PMID:21873635
RGD PMID:18922463 PMID:20439430 PMID:21873635 MGI:3815367 MGI:4443217, RGD:13792537 NCBI chr15:45,431,402...45,498,034
Ensembl chr15:45,431,703...45,497,702
JBrowse link
G Piwil4 piwi-like RNA-mediated gene silencing 4 located_in
is_active_in
ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(MGI:3815367|PMID:18922463)
UniProt
RGD
PMID:18922463 PMID:21873635 GO_REF:0000024 MGI:3815367, RGD:13792537 NCBI chr 8:11,536,520...11,579,883
Ensembl chr 8:11,536,520...11,579,761
JBrowse link
G Snrpg small nuclear ribonucleoprotein polypeptide G is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:118,812,278...118,819,827
Ensembl chr 4:118,812,252...118,819,826
JBrowse link
G Tdrd1 tudor domain containing 1 located_in
is_active_in
ISO
IBA
(MGI:3691397|PMID:17038506), (MGI:4356231|PMID:19465913), (MGI:4443217|PMID:20439430)
PMID:21873635
RGD PMID:17038506 PMID:19465913 PMID:20439430 PMID:21873635 MGI:3691397 MGI:4356231 MGI:4443217, RGD:13792537 NCBI chr 1:255,871,939...255,919,222
Ensembl chr 1:255,875,887...255,915,871
JBrowse link
G Tdrd15 tudor domain containing 15 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:30,741,956...30,818,500
Ensembl chr 6:30,741,086...30,767,049
JBrowse link
G Tdrd5 tudor domain containing 5 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:68,394,180...68,447,745
Ensembl chr13:68,394,061...68,441,319
JBrowse link
G Tdrd6 tudor domain containing 6 located_in
is_active_in
ISO
IBA
(MGI:3604923|PMID:16093322), (MGI:3695528|PMID:17141210)
PMID:21873635
RGD PMID:16093322 PMID:17141210 PMID:21873635 MGI:3604923 MGI:3695528, RGD:13792537 NCBI chr 9:17,344,033...17,359,348
Ensembl chr 9:17,344,026...17,359,344
JBrowse link
G Tdrd7 tudor domain containing 7 located_in
is_active_in
ISO
IBA
(MGI:3695528|PMID:17141210)
PMID:21873635
RGD PMID:17141210 PMID:21873635 MGI:3695528, RGD:13792537 NCBI chr 5:60,238,742...60,312,548
Ensembl chr 5:60,238,678...60,312,544
JBrowse link
G Tdrkh tudor and KH domain containing is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:182,049,175...182,071,516
Ensembl chr 2:182,049,215...182,070,755
JBrowse link
pi-body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asz1 ankyrin repeat, SAM and basic leucine zipper domain containing 1 located_in
is_active_in
ISO
IBA
(MGI:4356194|PMID:19730684)
PMID:21873635
RGD PMID:19730684 PMID:21873635 MGI:4356194, RGD:13792537 NCBI chr 4:46,400,485...46,456,085
Ensembl chr 4:46,400,485...46,456,085
JBrowse link
G Ddx4 DEAD-box helicase 4 located_in ISS
ISO
GO_REF:0000024
(MGI:4417983|PMID:20011505), (MGI:4443217|PMID:20439430), (MGI:5446593|PMID:22792342)
UniProt
RGD
PMID:20011505 PMID:20439430 PMID:22792342 GO_REF:0000024 MGI:4417983 MGI:4443217 MGI:5446593 NCBI chr 2:44,227,946...44,282,867
Ensembl chr 2:44,227,946...44,282,723
JBrowse link
G Mov10l1 Mov10 like RISC complex RNA helicase 1 located_in ISO (MGI:5470328|PMID:23166510) RGD PMID:23166510 MGI:5470328 NCBI chr 7:120,070,171...120,135,406
Ensembl chr 7:120,070,135...120,134,765
JBrowse link
G Piwil2 piwi-like RNA-mediated gene silencing 2 located_in ISO (MGI:4356194|PMID:19730684), (MGI:4417983|PMID:20011505), (MGI:4418580|PMID:20059948) RGD PMID:19730684 PMID:20011505 PMID:20059948 MGI:4356194 MGI:4417983 MGI:4418580 NCBI chr15:45,431,402...45,498,034
Ensembl chr15:45,431,703...45,497,702
JBrowse link
G Tdrd1 tudor domain containing 1 located_in ISO (MGI:4417983|PMID:20011505), (MGI:4418580|PMID:20059948), (MGI:4820495|PMID:19861488) RGD PMID:19861488 PMID:20011505 PMID:20059948 MGI:4417983 MGI:4418580 MGI:4820495 NCBI chr 1:255,871,939...255,919,222
Ensembl chr 1:255,875,887...255,915,871
JBrowse link
G Tdrd5 tudor domain containing 5 located_in ISS
ISO
IEA
GO_REF:0000024
(MGI:4946318|PMID:21383078)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:21383078 GO_REF:0000024 GO_REF:0000107 MGI:4946318 NCBI chr13:68,394,180...68,447,745
Ensembl chr13:68,394,061...68,441,319
JBrowse link
G Tdrkh tudor and KH domain containing located_in ISO (MGI:5494327|PMID:23714778) RGD PMID:23714778 MGI:5494327 NCBI chr 2:182,049,175...182,071,516
Ensembl chr 2:182,049,215...182,070,755
JBrowse link
piP-body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx4 DEAD-box helicase 4 located_in ISS
ISO
GO_REF:0000024
(MGI:4417983|PMID:20011505)
UniProt
RGD
PMID:20011505 GO_REF:0000024 MGI:4417983 NCBI chr 2:44,227,946...44,282,867
Ensembl chr 2:44,227,946...44,282,723
JBrowse link
G Mael maelstrom spermatogenic transposon silencer located_in ISO (MGI:4417983|PMID:20011505) RGD PMID:20011505 MGI:4417983 NCBI chr13:78,457,073...78,496,657
Ensembl chr13:78,457,073...78,496,657
JBrowse link
G Piwil4 piwi-like RNA-mediated gene silencing 4 located_in ISS
ISO
GO_REF:0000024
(MGI:4417983|PMID:20011505), (MGI:4418580|PMID:20059948)
UniProt
RGD
PMID:20011505 PMID:20059948 GO_REF:0000024 MGI:4417983 MGI:4418580 NCBI chr 8:11,536,520...11,579,883
Ensembl chr 8:11,536,520...11,579,761
JBrowse link
G Tdrd9 tudor domain containing 9 located_in ISS
ISO
GO_REF:0000024
(MGI:4417983|PMID:20011505), (MGI:4418580|PMID:20059948)
UniProt
RGD
PMID:20011505 PMID:20059948 GO_REF:0000024 MGI:4417983 MGI:4418580 NCBI chr 6:131,029,644...131,145,076
Ensembl chr 6:131,029,652...131,144,651
JBrowse link
G Tdrkh tudor and KH domain containing located_in ISO (MGI:5494327|PMID:23714778) RGD PMID:23714778 MGI:5494327 NCBI chr 2:182,049,175...182,071,516
Ensembl chr 2:182,049,215...182,070,755
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20174
    cellular anatomical entity 19912
      cytoplasm 11572
        pole plasm 24
          germ plasm + 24
Path 2
Term Annotations click to browse term
  cellular_component 20174
    cellular anatomical entity 19912
      intracellular anatomical structure 14757
        cytoplasm 11572
          pole plasm 24
            germ plasm + 24
paths to the root