Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:pole plasm
go back to main search page
Accession:GO:0045495 term browser browse the term
Definition:Differentiated cytoplasm associated with a pole (animal, vegetal, anterior, or posterior) of an oocyte, egg or early embryo.
Synonyms:exact_synonym: polar plasm
 narrow_synonym: germ plasm


show annotations for term's descendants           Sort by:
 
pole plasm term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wdr77 WD repeat domain 77 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:208,577,292...208,587,263
Ensembl chr 2:208,420,309...208,587,260
Ensembl chr 2:208,420,309...208,587,260
JBrowse link
P granule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07042226.1 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr  X:150,660,743...150,666,309 JBrowse link
G Carhsp1 calcium regulated heat stable protein 1 located_in ISS
ISO
GO_REF:0000024
(MGI:5320273|PMID:21078874)
UniProt
RGD
PMID:21078874 GO_REF:0000024 MGI:5320273 NCBI chr10:7,041,510...7,055,107
Ensembl chr10:7,041,510...7,055,101
JBrowse link
G Ddx3 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  Y:1,217,800...1,238,454
Ensembl chr  Y:1,217,800...1,238,420
JBrowse link
G Ddx3x DEAD-box helicase 3, X-linked is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:10,400,363...10,414,010
Ensembl chr  X:10,400,366...10,413,995
JBrowse link
G Ddx3y DEAD-box helicase 3, Y-linked is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:105,408,179...105,411,348
Ensembl chr13:105,408,179...105,411,348
JBrowse link
G Ddx4 DEAD-box helicase 4 is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:44,447,610...44,504,263
Ensembl chr 2:44,447,573...44,504,354
JBrowse link
G Helz helicase with zinc finger is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:95,767,754...95,911,025
Ensembl chr10:95,770,154...95,906,927
JBrowse link
G Henmt1 HEN methyltransferase 1 located_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 2:211,740,571...211,753,718 JBrowse link
G LOC687679 similar to small nuclear ribonucleoprotein polypeptide G is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:91,588,215...91,588,629
Ensembl chr 4:118,167,294...118,174,842
Ensembl chr 1:118,167,294...118,174,842
JBrowse link
G Mael maelstrom spermatogenic transposon silencer located_in
is_active_in
ISO
IBA
(MGI:3655410|PMID:16787967), (MGI:3813746|PMID:18694567)
PMID:21873635
RGD PMID:16787967 PMID:18694567, PMID:21873635 MGI:3655410 MGI:3813746, RGD:13792537 NCBI chr13:84,412,569...84,452,140
Ensembl chr13:84,383,670...84,452,181
JBrowse link
G Mov10 Mov10 RISC complex RNA helicase is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:207,277,088...207,301,245
Ensembl chr 2:207,278,161...207,300,854
JBrowse link
G Mov10l1 Mov10 like RISC complex RNA helicase 1 located_in
is_active_in
ISO
IBA
(MGI:4457283|PMID:20534472)
PMID:21873635
RGD PMID:20534472, PMID:21873635 MGI:4457283, RGD:13792537 NCBI chr 7:129,973,391...130,039,306
Ensembl chr 7:129,973,480...130,037,344
JBrowse link
G Piwil2 piwi-like RNA-mediated gene silencing 2 located_in ISO (MGI:3815367|PMID:18922463), (MGI:4443217|PMID:20439430) RGD PMID:18922463 PMID:20439430 MGI:3815367 MGI:4443217 NCBI chr15:52,037,693...52,116,277
Ensembl chr15:52,037,693...52,116,001
JBrowse link
G Piwil4 piwi-like RNA-mediated gene silencing 4 located_in ISS
ISO
GO_REF:0000024
(MGI:3815367|PMID:18922463)
UniProt
RGD
PMID:18922463 GO_REF:0000024 MGI:3815367 NCBI chr 8:13,208,774...13,251,970
Ensembl chr 8:13,208,774...13,251,812
JBrowse link
G Snrpg small nuclear ribonucleoprotein polypeptide G is_active_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:118,167,267...118,174,846
Ensembl chr 4:118,167,294...118,174,842
JBrowse link
G Tdrd1 tudor domain containing 1 located_in ISO (MGI:3691397|PMID:17038506), (MGI:4356231|PMID:19465913), (MGI:4443217|PMID:20439430) RGD PMID:17038506 PMID:19465913 PMID:20439430 MGI:3691397 MGI:4356231 MGI:4443217 NCBI chr 1:277,639,670...277,685,236
Ensembl chr 1:277,641,512...277,685,257
JBrowse link
G Tdrd6 tudor domain containing 6 located_in ISO (MGI:3604923|PMID:16093322), (MGI:3695528|PMID:17141210) RGD PMID:16093322 PMID:17141210 MGI:3604923 MGI:3695528 NCBI chr 9:19,917,613...19,932,888
Ensembl chr 9:19,917,603...19,932,920
JBrowse link
G Tdrd7 tudor domain containing 7 located_in ISO (MGI:3695528|PMID:17141210) RGD PMID:17141210 MGI:3695528 NCBI chr 5:61,557,909...61,631,719
Ensembl chr 5:61,564,864...61,631,710
JBrowse link
pi-body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asz1 ankyrin repeat, SAM and basic leucine zipper domain containing 1 located_in
is_active_in
ISO
IBA
(MGI:4356194|PMID:19730684)
PMID:21873635
RGD PMID:19730684, PMID:21873635 MGI:4356194, RGD:13792537 NCBI chr 4:45,358,574...45,414,177
Ensembl chr 4:45,358,574...45,414,177
JBrowse link
G Ddx4 DEAD-box helicase 4 located_in ISS
ISO
GO_REF:0000024
(MGI:4417983|PMID:20011505), (MGI:4443217|PMID:20439430), (MGI:5446593|PMID:22792342)
UniProt
RGD
PMID:20011505 PMID:20439430 PMID:22792342 GO_REF:0000024 MGI:4417983 MGI:4443217 MGI:5446593 NCBI chr 2:44,447,610...44,504,263
Ensembl chr 2:44,447,573...44,504,354
JBrowse link
G Mov10l1 Mov10 like RISC complex RNA helicase 1 located_in ISO (MGI:5470328|PMID:23166510) RGD PMID:23166510 MGI:5470328 NCBI chr 7:129,973,391...130,039,306
Ensembl chr 7:129,973,480...130,037,344
JBrowse link
G Piwil2 piwi-like RNA-mediated gene silencing 2 located_in ISO (MGI:4356194|PMID:19730684), (MGI:4417983|PMID:20011505), (MGI:4418580|PMID:20059948) RGD PMID:19730684 PMID:20011505 PMID:20059948 MGI:4356194 MGI:4417983 MGI:4418580 NCBI chr15:52,037,693...52,116,277
Ensembl chr15:52,037,693...52,116,001
JBrowse link
G Tdrd1 tudor domain containing 1 located_in ISO (MGI:4417983|PMID:20011505), (MGI:4418580|PMID:20059948), (MGI:4820495|PMID:19861488) RGD PMID:19861488 PMID:20011505 PMID:20059948 MGI:4417983 MGI:4418580 MGI:4820495 NCBI chr 1:277,639,670...277,685,236
Ensembl chr 1:277,641,512...277,685,257
JBrowse link
G Tdrd5 tudor domain containing 5 located_in ISS
ISO
IEA
GO_REF:0000024
(MGI:4946318|PMID:21383078)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:21383078 GO_REF:0000024 GO_REF:0000107 MGI:4946318 NCBI chr13:73,872,637...73,922,640
Ensembl chr13:73,872,621...73,921,969
JBrowse link
G Tdrkh tudor and KH domain containing located_in ISO (MGI:5494327|PMID:23714778) RGD PMID:23714778 MGI:5494327 NCBI chr 2:195,649,813...195,674,217
Ensembl chr 2:195,651,930...195,674,616
JBrowse link
piP-body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx4 DEAD-box helicase 4 located_in ISS
ISO
GO_REF:0000024
(MGI:4417983|PMID:20011505)
UniProt
RGD
PMID:20011505 GO_REF:0000024 MGI:4417983 NCBI chr 2:44,447,610...44,504,263
Ensembl chr 2:44,447,573...44,504,354
JBrowse link
G Mael maelstrom spermatogenic transposon silencer located_in ISO (MGI:4417983|PMID:20011505) RGD PMID:20011505 MGI:4417983 NCBI chr13:84,412,569...84,452,140
Ensembl chr13:84,383,670...84,452,181
JBrowse link
G Piwil4 piwi-like RNA-mediated gene silencing 4 located_in ISS
ISO
GO_REF:0000024
(MGI:4417983|PMID:20011505), (MGI:4418580|PMID:20059948)
UniProt
RGD
PMID:20011505 PMID:20059948 GO_REF:0000024 MGI:4417983 MGI:4418580 NCBI chr 8:13,208,774...13,251,970
Ensembl chr 8:13,208,774...13,251,812
JBrowse link
G Tdrd9 tudor domain containing 9 located_in ISS
ISO
GO_REF:0000024
(MGI:4417983|PMID:20011505), (MGI:4418580|PMID:20059948)
UniProt
RGD
PMID:20011505 PMID:20059948 GO_REF:0000024 MGI:4417983 MGI:4418580 NCBI chr 6:136,536,636...136,650,481
Ensembl chr 6:136,536,736...136,649,859
JBrowse link
G Tdrkh tudor and KH domain containing located_in ISO (MGI:5494327|PMID:23714778) RGD PMID:23714778 MGI:5494327 NCBI chr 2:195,649,813...195,674,217
Ensembl chr 2:195,651,930...195,674,616
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20131
    cellular anatomical entity 19832
      cytoplasm 11415
        pole plasm 23
          germ plasm + 22
Path 2
Term Annotations click to browse term
  cellular_component 20131
    cellular anatomical entity 19832
      intracellular anatomical structure 14432
        cytoplasm 11415
          pole plasm 23
            germ plasm + 22
paths to the root