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ONTOLOGY REPORT - ANNOTATIONS


Term:photoreceptor cell maintenance
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Accession:GO:0045494 term browser browse the term
Definition:Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light.



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photoreceptor cell maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca4 ATP binding cassette subfamily A member 4 acts_upstream_of_or_within ISO MGI:1857860 (MGI:2136674|PMID:11431429) RGD PMID:11431429 MGI:2136674 NCBI chr 2:210,164,813...210,302,069
Ensembl chr 2:210,164,813...210,302,069
JBrowse link
G Adgrv1 adhesion G protein-coupled receptor V1 involved_in ISO (PMID:14740321) RGD PMID:14740321 NCBI chr 2:11,331,434...11,911,713
Ensembl chr 2:11,331,442...11,911,688
JBrowse link
G Atp1b2 ATPase Na+/K+ transporting subunit beta 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:69165|PMID:7525597)
Ensembl
RGD
PMID:7525597 GO_REF:0000107 MGI:69165 NCBI chr10:54,318,698...54,324,933
Ensembl chr10:54,318,701...54,324,933
JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 involved_in ISO (PMID:17980398) RGD PMID:17980398 NCBI chr 1:202,184,812...202,204,118
Ensembl chr 1:202,186,125...202,204,086
JBrowse link
G Bbs10 Bardet-Biedl syndrome 10 involved_in ISO (PMID:17980398) RGD PMID:17980398 NCBI chr 7:46,751,028...46,754,132
Ensembl chr 7:46,750,993...46,754,141
JBrowse link
G Bbs12 Bardet-Biedl syndrome 12 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:5444297 (MGI:5444069|PMID:22958920), (MGI:5462139|PMID:22869374)
RGD PMID:22869374 PMID:22958920 PMID:21873635 MGI:5444069 MGI:5462139, RGD:13792537 NCBI chr 2:120,203,396...120,221,024 JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within ISO MGI:3521669 (MGI:3512844|PMID:15539463) RGD PMID:15539463 MGI:3512844 NCBI chr19:10,909,653...10,944,998
Ensembl chr19:10,909,619...10,944,993
JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO MGI:2384917|MGI:3045473|MGI:3055492 (MGI:3717936|PMID:17591906), (MGI:3784949|PMID:16794820), (MGI:4940001|PMID:20398886), (MGI:4949555|PMID:21444805), (MGI:5525015|PMID:23943788) RGD PMID:16794820 PMID:17591906 PMID:20398886 PMID:21444805 PMID:23943788 MGI:3717936 MGI:3784949 MGI:4940001 MGI:4949555 MGI:5525015 NCBI chr 8:59,731,912...59,765,408
Ensembl chr 8:59,731,912...59,765,607
JBrowse link
G Bsg basigin (Ok blood group) involved_in ISO
ISS
(PMID:25957687)
(MGI:6436439|PMID:25957687)
GO_REF:0000024
RGD
UniProt
PMID:25957687 GO_REF:0000024 MGI:6436439 NCBI chr 7:9,993,170...10,000,387
Ensembl chr 7:9,993,170...10,000,387
JBrowse link
G Cdh23 cadherin-related 23 involved_in ISO
IEA
(PMID:16679490)
GO_REF:0000107
RGD
Ensembl
PMID:16679490 GO_REF:0000107 NCBI chr20:28,240,643...28,622,490
Ensembl chr20:28,240,645...28,622,419
JBrowse link
G Cdhr1 cadherin-related family member 1 involved_in
acts_upstream_of_or_within
ISO (PMID:20805371)
MGI:3046299 (MGI:2154844|PMID:11738025)
RGD PMID:11738025 PMID:20805371 MGI:2154844 NCBI chr16:12,843,436...12,863,321
Ensembl chr16:12,843,437...12,863,396
JBrowse link
G Cep290 centrosomal protein 290 acts_upstream_of_or_within ISO MGI:2143311|MGI:3624136 (MGI:5525015|PMID:23943788) RGD PMID:23943788 MGI:5525015 NCBI chr 7:35,310,071...35,399,392
Ensembl chr 7:35,310,199...35,399,392
JBrowse link
G Cib2 calcium and integrin binding family member 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5487486|PMID:23023331)
UniProt
RGD
PMID:23023331 GO_REF:0000024 MGI:5487486 NCBI chr 8:54,930,265...54,947,157 JBrowse link
G Clcn3 chloride voltage-gated channel 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2183297 (MGI:2182197|PMID:11182090)
Ensembl
RGD
PMID:11182090 GO_REF:0000107 MGI:2182197 NCBI chr16:29,127,419...29,200,133
Ensembl chr16:29,127,419...29,200,119
JBrowse link
G Cln8 CLN8, transmembrane ER and ERGIC protein acts_upstream_of_or_within ISO MGI:1856959 (MGI:1096072|PMID:9151333), (MGI:3695117|PMID:15565184) RGD PMID:9151333 PMID:15565184 MGI:1096072 MGI:3695117 NCBI chr16:74,749,662...74,759,553
Ensembl chr16:74,749,662...74,759,774
JBrowse link
G Clrn1 clarin 1 involved_in ISO
IEA
(PMID:15521980)
GO_REF:0000107
RGD
Ensembl
PMID:15521980 GO_REF:0000107 NCBI chr 2:143,084,030...143,130,948
Ensembl chr 2:143,084,030...143,130,948
JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 acts_upstream_of_or_within ISO MGI:3527896 (MGI:3527312|PMID:15634774) RGD PMID:15634774 MGI:3527312 NCBI chr19:9,726,595...9,791,111
Ensembl chr19:9,726,595...9,791,173
JBrowse link
G Crb1 crumbs cell polarity complex component 1 acts_upstream_of_or_within ISO (MGI:3696487|PMID:17234588), (MGI:5608935|PMID:25147295) RGD PMID:17234588 PMID:25147295 MGI:3696487 MGI:5608935 NCBI chr13:50,801,484...50,989,261
Ensembl chr13:50,800,959...50,989,261
JBrowse link
G Crb2 crumbs cell polarity complex component 2 involved_in ISO (MGI:5461109|PMID:23001562) RGD PMID:23001562 MGI:5461109 NCBI chr 3:21,542,138...21,564,876
Ensembl chr 3:21,542,221...21,563,294
JBrowse link
G Crocc ciliary rootlet coiled-coil, rootletin acts_upstream_of_or_within ISO MGI:3580447 (MGI:3580205|PMID:15870283) RGD PMID:15870283 MGI:3580205 NCBI chr 5:153,320,962...153,363,734
Ensembl chr 5:153,320,962...153,363,578
JBrowse link
G Dram2 DNA-damage regulated autophagy modulator 2 involved_in ISO
IBA
ISS
(PMID:25983245)
PMID:21873635
(MGI:5705208|PMID:25983245)
GO_REF:0000024
RGD
UniProt
PMID:25983245 PMID:21873635 GO_REF:0000024 MGI:5705208, RGD:13792537 NCBI chr 2:194,035,624...194,064,415
Ensembl chr 2:194,035,818...194,063,403
JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor acts_upstream_of_or_within ISO MGI:1932102 (MGI:3699047|PMID:17145777) RGD PMID:17145777 MGI:3699047 NCBI chr16:7,764,983...7,835,587
Ensembl chr16:7,765,013...7,835,587
JBrowse link
G Esrrb estrogen-related receptor beta involved_in ISS
ISO
GO_REF:0000024
(MGI:4457950|PMID:20534447)
UniProt
RGD
PMID:20534447 GO_REF:0000024 MGI:4457950 NCBI chr 6:106,007,662...106,163,136
Ensembl chr 6:106,008,095...106,160,791
JBrowse link
G Iqcb1 IQ motif containing B1 involved_in ISO (PMID:15723066) RGD PMID:15723066 NCBI chr11:63,905,595...63,960,141
Ensembl chr11:63,905,590...63,960,093
JBrowse link
G Lca5 lebercilin LCA5 acts_upstream_of_or_within ISS
ISO
GO_REF:0000024
(MGI:5050784|PMID:21606596)
UniProt
RGD
PMID:21606596 GO_REF:0000024 MGI:5050784 NCBI chr 8:84,307,696...84,375,025
Ensembl chr 8:84,317,659...84,374,956
JBrowse link
G LOC689412 similar to CG4025-PA involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:60,414,565...60,415,271
Ensembl chr13:60,414,565...60,415,271
JBrowse link
G Mak male germ cell-associated kinase involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2179972 (MGI:5298333|PMID:21148103)
UniProt
RGD
PMID:21148103 GO_REF:0000024 MGI:5298333 NCBI chr17:23,683,674...23,731,125
Ensembl chr17:23,693,878...23,730,001
JBrowse link
G Map1a microtubule-associated protein 1A acts_upstream_of_or_within ISO MGI:109571|MGI:2651573 (MGI:5489838|PMID:22323461) RGD PMID:22323461 MGI:5489838 NCBI chr 3:108,263,217...108,283,936
Ensembl chr 3:108,263,151...108,282,899
JBrowse link
G Mdm1 Mdm1 nuclear protein acts_upstream_of_or_within ISO MGI:2664155 (MGI:3822263|PMID:18805803) RGD PMID:18805803 MGI:3822263 NCBI chr 7:53,729,603...53,766,034
Ensembl chr 7:53,729,610...53,766,034
JBrowse link
G Mkks MKKS centrosomal shuttling protein acts_upstream_of_or_within ISO MGI:3526444|MGI:3608879 (MGI:3581923|PMID:15772095), (MGI:3607949|PMID:16170314) RGD PMID:15772095 PMID:16170314 MGI:3581923 MGI:3607949 NCBI chr 3:124,201,877...124,221,142
Ensembl chr 3:124,201,877...124,220,162
JBrowse link
G Nphp3 nephrocystin 3 involved_in ISO (PMID:12872122) RGD PMID:12872122 NCBI chr 8:104,621,908...104,662,383
Ensembl chr 8:104,621,864...104,662,383
JBrowse link
G Nphp4 nephrocystin 4 acts_upstream_of_or_within ISO MGI:3032515 (MGI:4867588|PMID:21078623) RGD PMID:21078623 MGI:4867588 NCBI chr 5:162,986,157...163,073,708
Ensembl chr 5:162,988,370...163,073,706
JBrowse link
G Nxnl1 nucleoredoxin-like 1 involved_in ISO (PMID:25957687)
(MGI:6436439|PMID:25957687)
RGD PMID:25957687 MGI:6436439 NCBI chr16:18,270,604...18,279,797
Ensembl chr16:18,262,688...18,279,987
JBrowse link
G Nxnl2 nucleoredoxin-like 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:14,031,151...14,035,897
Ensembl chr17:14,031,153...14,036,189
JBrowse link
G Pcdh15 protocadherin related 15 involved_in ISO (PMID:11398101) RGD PMID:11398101 NCBI chr20:13,997,094...15,496,446
Ensembl chr20:13,963,565...15,494,719
JBrowse link
G Pde6a phosphodiesterase 6A acts_upstream_of_or_within ISO MGI:4867884 (MGI:5587955|PMID:22183357) RGD PMID:22183357 MGI:5587955 NCBI chr18:54,676,863...54,749,644
Ensembl chr18:54,676,863...54,748,816
JBrowse link
G Prom1 prominin 1 involved_in IBA
ISO
PMID:21873635
(PMID:18654668)
RGD PMID:18654668 PMID:21873635 RGD:13792537 NCBI chr14:66,989,545...67,094,534
Ensembl chr14:66,990,160...67,094,527
JBrowse link
G Rho rhodopsin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5609882 (MGI:5587955|PMID:22183357)
(MGI:6508517|PMID:32312889)
Ensembl
RGD
PMID:22183357 PMID:32312889 GO_REF:0000107 MGI:5587955 MGI:6508517 NCBI chr 4:148,975,597...148,988,693
Ensembl chr 4:148,980,611...148,985,773
JBrowse link
G Rp1 RP1, axonemal microtubule associated involved_in ISO (MGI:3604930|PMID:16126734) RGD PMID:16126734 MGI:3604930 NCBI chr 5:15,121,104...15,582,363
Ensembl chr 5:15,121,133...15,579,363
JBrowse link
G Rp1l1 RP1 like 1 involved_in ISO (PMID:23281133)
(MGI:4353917|PMID:19657028)
RGD PMID:19657028 PMID:23281133 MGI:4353917 NCBI chr15:38,259,595...38,271,269
Ensembl chr15:38,259,928...38,270,316
JBrowse link
G Slc2a1 solute carrier family 2 member 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:132,717,196...132,745,416
Ensembl chr 5:132,717,196...132,745,416
JBrowse link
G Spata7 spermatogenesis associated 7 involved_in IBA
ISO
IEA
ISS
PMID:21873635
(MGI:5608598|PMID:25398945)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:25398945 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:5608598, RGD:13792537 NCBI chr 6:117,879,828...117,925,284
Ensembl chr 6:117,879,823...117,925,284
JBrowse link
G Tub TUB bipartite transcription factor acts_upstream_of_or_within ISO MGI:1857081 (MGI:1352376|PMID:10629044) RGD PMID:10629044 MGI:1352376 NCBI chr 1:163,008,198...163,030,958
Ensembl chr 1:162,951,931...163,026,812
JBrowse link
G Tulp1 TUB like protein 1 involved_in
acts_upstream_of_or_within
ISO (MGI:4397555|PMID:19218615)
MGI:1857081|MGI:1859921|MGI:4867883 (MGI:1352266|PMID:10607826), (MGI:2388540|PMID:10549638), (MGI:3717940|PMID:17525220), (MGI:5587955|PMID:22183357)
RGD PMID:10549638 PMID:10607826 PMID:17525220 PMID:19218615 PMID:22183357 MGI:1352266 MGI:2388540 MGI:3717940 MGI:4397555 MGI:5587955 NCBI chr20:6,412,170...6,424,312
Ensembl chr20:6,412,171...6,424,073
JBrowse link
G Ush1c USH1 protein network component harmonin involved_in ISO (PMID:11398101) RGD PMID:11398101 NCBI chr 1:96,695,303...96,743,671
Ensembl chr 1:96,695,307...96,743,671
JBrowse link
G Ush1g USH1 protein network component sans involved_in ISO (PMID:11398101) RGD PMID:11398101 NCBI chr10:100,559,721...100,563,590
Ensembl chr10:100,557,629...100,563,590
JBrowse link
G Ush2a usherin involved_in
acts_upstream_of_or_within
ISO (PMID:10090909)
MGI:3702040 (MGI:3700725|PMID:17360538)
RGD PMID:10090909 PMID:17360538 MGI:3700725 NCBI chr13:99,837,445...100,503,935
Ensembl chr13:99,837,445...100,503,922
JBrowse link
G Usp45 ubiquitin specific peptidase 45 involved_in ISO (MGI:6383248|PMID:30573563) RGD PMID:30573563 MGI:6383248 NCBI chr 5:35,318,621...35,392,090
Ensembl chr 5:35,318,635...35,389,420
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19504
    multicellular organismal process 8834
      photoreceptor cell maintenance 48
Path 2
Term Annotations click to browse term
  biological_process 19504
    biological regulation 13513
      regulation of biological quality 4156
        homeostatic process 1995
          multicellular organismal homeostasis 564
            tissue homeostasis 295
              retina homeostasis 81
                photoreceptor cell maintenance 48
paths to the root