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ONTOLOGY REPORT - ANNOTATIONS

Term:photoreceptor cell maintenance
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Accession:GO:0045494 term browser browse the term
Definition:Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light.


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photoreceptor cell maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca4 ATP binding cassette subfamily A member 4 acts_upstream_of_or_within ISO MGI:1857860 (PMID:11431429) RGD PMID:11431429 NCBI chr 2:212,849,470...212,986,730
Ensembl chr 2:210,164,813...210,302,069 		JBrowse link
G Adgrv1 adhesion G protein-coupled receptor V1 involved_in ISO
IEA		 (PMID:14740321)
GO_REF:0000107		 RGD
Ensembl		 PMID:14740321 GO_REF:0000107 NCBI chr 2:13,067,149...13,647,407
Ensembl chr 2:11,331,442...11,911,688 		JBrowse link
G Arap1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:28324111), (PMID:35758026)		 Ensembl
RGD		 PMID:28324111 PMID:35758026 GO_REF:0000107 NCBI chr 1:165,160,701...165,226,219
Ensembl chr 1:155,748,652...155,814,184 		JBrowse link
G Atp1b2 ATPase Na+/K+ transporting subunit beta 2 acts_upstream_of_or_within ISO (PMID:7525597) RGD PMID:7525597 NCBI chr10:54,817,473...54,823,708
Ensembl chr10:54,318,701...54,324,933 		JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 involved_in ISO
IEA		 (PMID:17980398)
GO_REF:0000107		 RGD
Ensembl		 PMID:17980398 GO_REF:0000107 NCBI chr 1:211,614,195...211,633,504
Ensembl chr 1:202,186,125...202,204,086 		JBrowse link
G Bbs10 Bardet-Biedl syndrome 10 involved_in ISO
IEA		 (PMID:17980398)
GO_REF:0000107		 RGD
Ensembl		 PMID:17980398 GO_REF:0000107 NCBI chr 7:46,751,028...46,754,132
Ensembl chr 7:46,750,993...46,754,141 		JBrowse link
G Bbs12 Bardet-Biedl syndrome 12 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO		 GO_REF:0000033
GO_REF:0000107
MGI:5444297 (PMID:22869374), (PMID:22958920)		 GO_Central
Ensembl
RGD		 PMID:22869374 PMID:22958920 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:120,203,396...120,221,024
Ensembl chr 2:120,203,428...120,219,255 		JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within ISO
IEA		 MGI:3521669 (PMID:15539463)
GO_REF:0000107		 RGD
Ensembl		 PMID:15539463 GO_REF:0000107 NCBI chr19:10,909,653...10,944,998
Ensembl chr19:10,909,619...10,944,993 		JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO
IEA		 MGI:2384917|MGI:3045473|MGI:3055492 (PMID:16794820), (PMID:17591906), (PMID:20398886), (PMID:21444805), (PMID:23943788)
GO_REF:0000107		 RGD
Ensembl		 PMID:16794820 PMID:17591906 PMID:20398886 PMID:21444805 PMID:23943788 GO_REF:0000107 NCBI chr 8:68,627,739...68,661,232
Ensembl chr 8:59,731,912...59,765,607 		JBrowse link
G Bsg basigin involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:25957687)		 UniProt
Ensembl
RGD		 PMID:25957687 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:10,643,788...10,651,005
Ensembl chr 7:9,993,170...10,000,387 		JBrowse link
G Cdh23 cadherin-related 23 involved_in ISO
IEA		 (PMID:16679490)
GO_REF:0000107		 RGD
Ensembl		 PMID:16679490 GO_REF:0000107 NCBI chr20:28,783,124...29,165,624
Ensembl chr20:28,240,645...28,622,419 		JBrowse link
G Cdhr1 cadherin-related family member 1 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:20805371)
GO_REF:0000107
MGI:3046299 (PMID:11738025)		 RGD
Ensembl		 PMID:11738025 PMID:20805371 GO_REF:0000107 NCBI chr16:12,863,696...12,883,579
Ensembl chr16:12,843,437...12,863,396 		JBrowse link
G Cep290 centrosomal protein 290 acts_upstream_of_or_within ISO MGI:2143311|MGI:3624136 (PMID:23943788) RGD PMID:23943788 NCBI chr 7:37,196,765...37,285,955
Ensembl chr 7:35,310,199...35,399,392 		JBrowse link
G Cib2 calcium and integrin binding family member 2 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:23023331)		 UniProt
Ensembl
RGD		 PMID:23023331 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:63,826,410...63,843,301 JBrowse link
G Clcn3 chloride voltage-gated channel 3 acts_upstream_of_or_within ISO MGI:2183297 (PMID:11182090) RGD PMID:11182090 NCBI chr16:34,138,004...34,210,984
Ensembl chr16:29,127,419...29,200,119 		JBrowse link
G Cln8 CLN8, transmembrane ER and ERGIC protein acts_upstream_of_or_within ISO
IEA		 MGI:1856959 (PMID:15565184), (PMID:9151333)
GO_REF:0000107		 RGD
Ensembl		 PMID:9151333 PMID:15565184 GO_REF:0000107 NCBI chr16:81,451,941...81,462,046
Ensembl chr16:74,749,662...74,759,774 		JBrowse link
G Clrn1 clarin 1 involved_in ISO
IEA		 (PMID:15521980)
GO_REF:0000107		 RGD
Ensembl		 PMID:15521980 GO_REF:0000107 NCBI chr 2:145,233,941...145,280,855
Ensembl chr 2:143,084,030...143,130,948 		JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 acts_upstream_of_or_within ISO
IEA		 MGI:3527896 (PMID:15634774)
GO_REF:0000107		 RGD
Ensembl		 PMID:15634774 GO_REF:0000107 NCBI chr19:9,732,646...9,798,864
Ensembl chr19:9,726,595...9,791,173 		JBrowse link
G Crb1 crumbs cell polarity complex component 1 acts_upstream_of_or_within ISO
IEA		 (PMID:17234588), (PMID:25147295)
GO_REF:0000107		 RGD
Ensembl		 PMID:17234588 PMID:25147295 GO_REF:0000107 NCBI chr13:53,352,932...53,540,019
Ensembl chr13:50,800,959...50,989,261 		JBrowse link
G Crb2 crumbs cell polarity complex component 2 involved_in ISO (PMID:23001562) RGD PMID:23001562 NCBI chr 3:21,542,138...21,564,876
Ensembl chr 3:21,542,221...21,563,294 		JBrowse link
G Crocc ciliary rootlet coiled-coil, rootletin acts_upstream_of_or_within ISO
IEA		 MGI:3580447 (PMID:15870283)
GO_REF:0000107		 RGD
Ensembl		 PMID:15870283 GO_REF:0000107 NCBI chr 5:153,320,962...153,363,734
Ensembl chr 5:153,320,962...153,363,578 		JBrowse link
G Dram2 DNA damage regulated autophagy modulator 2 involved_in
acts_upstream_of_or_within		 ISO
IEA
IBA
ISS		 (PMID:25983245)
GO_REF:0000107
(PMID:37691820)
GO_REF:0000033
GO_REF:0000024		 RGD
Ensembl
GO_Central
UniProt		 PMID:25983245 PMID:37691820 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:194,035,624...194,064,415
Ensembl chr 2:194,035,818...194,063,403 		JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor acts_upstream_of_or_within ISO
IEA		 MGI:1932102 (PMID:17145777)
GO_REF:0000107		 RGD
Ensembl		 PMID:17145777 GO_REF:0000107 NCBI chr16:7,771,311...7,841,895
Ensembl chr16:7,765,013...7,835,587 		JBrowse link
G Esrrb estrogen-related receptor beta involved_in ISS
ISO		 GO_REF:0000024
(PMID:20534447)		 UniProt
RGD		 PMID:20534447 GO_REF:0000024 NCBI chr 6:111,738,662...111,894,087
Ensembl chr 6:106,008,095...106,160,791 		JBrowse link
G Iqcb1 IQ motif containing B1 involved_in ISO
IEA		 (PMID:15723066)
GO_REF:0000107		 RGD
Ensembl		 PMID:15723066 GO_REF:0000107 NCBI chr11:77,410,986...77,465,540
Ensembl chr11:63,905,590...63,960,093 		JBrowse link
G Lca5 lebercilin LCA5 acts_upstream_of_or_within ISS
ISO		 GO_REF:0000024
(PMID:21606596)		 UniProt
RGD		 PMID:21606596 GO_REF:0000024 NCBI chr 8:93,187,735...93,255,060
Ensembl chr 8:84,317,659...84,374,956 		JBrowse link
G Mak male germ cell-associated kinase involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 GO_REF:0000024
(PMID:21148103)
MGI:2179972 (PMID:21148103)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:21148103 GO_REF:0000024 GO_REF:0000107 NCBI chr17:23,889,417...23,936,857
Ensembl chr17:23,693,878...23,730,001 		JBrowse link
G Map1a microtubule-associated protein 1A acts_upstream_of_or_within ISO MGI:109571|MGI:2651573 (PMID:22323461) RGD PMID:22323461 NCBI chr 3:128,716,907...128,736,638
Ensembl chr 3:108,263,151...108,282,899 		JBrowse link
G Mkks MKKS centrosomal shuttling protein acts_upstream_of_or_within ISO
IEA		 MGI:3526444|MGI:3608879 (PMID:15772095), (PMID:16170314)
GO_REF:0000107		 RGD
Ensembl		 PMID:15772095 PMID:16170314 GO_REF:0000107 NCBI chr 3:124,201,877...124,221,142
Ensembl chr 3:124,201,877...124,220,162 		JBrowse link
G Nphp3 nephrocystin 3 involved_in ISO
IEA		 (PMID:12872122)
GO_REF:0000107		 RGD
Ensembl		 PMID:12872122 GO_REF:0000107 NCBI chr 8:113,500,708...113,541,179
Ensembl chr 8:104,621,864...104,662,383 		JBrowse link
G Nphp4 nephrocystin 4 acts_upstream_of_or_within ISO
IEA		 MGI:3032515 (PMID:21078623)
GO_REF:0000107		 RGD
Ensembl		 PMID:21078623 GO_REF:0000107 NCBI chr 5:168,270,522...168,356,393
Ensembl chr 5:162,988,370...163,073,706 		JBrowse link
G Nxnl1 nucleoredoxin-like 1 involved_in ISO
IEA		 (PMID:25957687)
GO_REF:0000002
GO_REF:0000107		 RGD
InterPro
Ensembl		 PMID:25957687 GO_REF:0000002 GO_REF:0000107 NCBI chr16:18,303,454...18,311,510
Ensembl chr16:18,262,688...18,279,987 		JBrowse link
G Nxnl2 nucleoredoxin-like 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:14,031,151...14,035,897
Ensembl chr17:14,031,153...14,036,189 		JBrowse link
G Pcdh15 protocadherin related 15 involved_in ISO (PMID:11398101) RGD PMID:11398101 NCBI chr20:13,996,383...15,495,206
Ensembl chr20:13,963,565...15,494,719 		JBrowse link
G Pde6a phosphodiesterase 6A acts_upstream_of_or_within ISO MGI:4867884 (PMID:22183357) RGD PMID:22183357 NCBI chr18:56,947,249...57,019,015
Ensembl chr18:54,676,863...54,748,816 		JBrowse link
G Prom1 prominin 1 involved_in ISO
IEA
IBA		 (PMID:18654668)
GO_REF:0000107
GO_REF:0000033		 RGD
Ensembl
GO_Central		 PMID:18654668 GO_REF:0000033 GO_REF:0000107 NCBI chr14:71,202,303...71,307,008
Ensembl chr14:66,990,160...67,094,527 		JBrowse link
G Rho rhodopsin acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:5609882 (PMID:22183357)
GO_REF:0000107
(PMID:32312889)		 RGD
Ensembl		 PMID:22183357 PMID:32312889 GO_REF:0000107 NCBI chr 4:150,653,205...150,658,367
Ensembl chr 4:148,980,611...148,985,773 		JBrowse link
G Rp1 RP1, axonemal microtubule associated involved_in ISO
IEA		 (PMID:16126734)
GO_REF:0000107		 RGD
Ensembl		 PMID:16126734 GO_REF:0000107 NCBI chr 5:19,918,728...20,380,811
Ensembl chr 5:15,121,133...15,579,363 		JBrowse link
G Rp1l1 RP1 like 1 involved_in ISO
IEA		 (PMID:23281133)
GO_REF:0000107
(PMID:19657028)		 RGD
Ensembl		 PMID:19657028 PMID:23281133 GO_REF:0000107 NCBI chr15:42,435,803...42,447,165
Ensembl chr15:38,259,928...38,270,316 		JBrowse link
G Slc2a1 solute carrier family 2 member 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:25957687)		 UniProt
Ensembl
RGD		 PMID:25957687 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:138,002,522...138,030,742
Ensembl chr 5:132,717,196...132,745,416 		JBrowse link
G Spata7 spermatogenesis associated 7 involved_in IEA
ISO
IBA
ISS		 GO_REF:0000107
(PMID:25398945)
GO_REF:0000033
GO_REF:0000024		 Ensembl
RGD
GO_Central
UniProt		 PMID:25398945 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr 6:123,609,519...123,655,001
Ensembl chr 6:117,879,823...117,925,284 		JBrowse link
G Tub TUB bipartite transcription factor acts_upstream_of_or_within ISO MGI:1857081 (PMID:10629044) RGD PMID:10629044 NCBI chr 1:172,386,772...172,465,791
Ensembl chr 1:162,951,931...163,026,812 		JBrowse link
G Tulp1 TUB like protein 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:1857081|MGI:1859921|MGI:4867883 (PMID:10549638), (PMID:10607826), (PMID:17525220), (PMID:22183357)
GO_REF:0000107
(PMID:19218615)		 RGD
Ensembl		 PMID:10549638 PMID:10607826 PMID:17525220 PMID:19218615 PMID:22183357 GO_REF:0000107 NCBI chr20:6,413,901...6,425,833
Ensembl chr20:6,412,171...6,424,073 		JBrowse link
G Ush1c USH1 protein network component harmonin involved_in ISO
IEA		 (PMID:11398101)
GO_REF:0000107		 RGD
Ensembl		 PMID:11398101 GO_REF:0000107 NCBI chr 1:105,831,719...105,880,082
Ensembl chr 1:96,695,307...96,743,671 		JBrowse link
G Ush1g USH1 protein network component sans involved_in ISO
IEA		 (PMID:11398101)
GO_REF:0000107		 RGD
Ensembl		 PMID:11398101 GO_REF:0000107 NCBI chr10:101,055,923...101,062,753
Ensembl chr10:100,557,629...100,563,590 		JBrowse link
G Ush2a usherin involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:10090909)
GO_REF:0000107
MGI:3702040 (PMID:17360538)		 RGD
Ensembl		 PMID:10090909 PMID:17360538 GO_REF:0000107 NCBI chr13:102,368,783...103,035,230
Ensembl chr13:99,837,445...100,503,922 		JBrowse link
G Usp45 ubiquitin specific peptidase 45 involved_in ISO
IEA		 (PMID:30573563)
GO_REF:0000107		 RGD
Ensembl		 PMID:30573563 GO_REF:0000107 NCBI chr 5:40,115,394...40,188,861
Ensembl chr 5:35,318,635...35,389,420 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20558
    multicellular organismal process 9017
      photoreceptor cell maintenance 47
Path 2
Term Annotations click to browse term
  biological_process 20558
    multicellular organismal process 9017
      multicellular organismal-level homeostasis 973
        anatomical structure homeostasis 298
          tissue homeostasis 298
            retina homeostasis 65
              photoreceptor cell maintenance 47
paths to the root