Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:photoreceptor cell maintenance
go back to main search page
Accession:GO:0045494 term browser browse the term
Definition:Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light.


show annotations for term's descendants           Sort by:
 
photoreceptor cell maintenance term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca4 ATP binding cassette subfamily A member 4 ISO MGI:1857860 (MGI:2136674|PMID:11431429) RGD PMID:11431429 MGI:2136674 NCBI chr 2:225,645,539...225,783,288
Ensembl chr 2:225,645,568...225,783,287
JBrowse link
G Adgrv1 adhesion G protein-coupled receptor V1 ISO (PMID:14740321) RGD PMID:14740321 NCBI chr 2:8,926,843...9,504,455
Ensembl chr 2:8,926,850...9,504,134
JBrowse link
G Atp1b2 ATPase Na+/K+ transporting subunit beta 2 IEA
ISO
GO_REF:0000107
(MGI:69165|PMID:7525597)
Ensembl
RGD
PMID:7525597 GO_REF:0000107, MGI:69165 NCBI chr10:56,205,622...56,211,879
Ensembl chr10:56,205,625...56,211,891
JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 ISO (PMID:17980398) RGD PMID:17980398 NCBI chr 1:220,146,084...220,165,545
Ensembl chr 1:220,147,327...220,165,678
JBrowse link
G Bbs10 Bardet-Biedl syndrome 10 ISO (PMID:17980398) RGD PMID:17980398 NCBI chr 7:54,030,229...54,034,354
Ensembl chr 7:54,031,316...54,034,350
JBrowse link
G Bbs12 Bardet-Biedl syndrome 12 IBA
ISO
PMID:21873635
MGI:5444297 (MGI:5444069|PMID:22958920), (MGI:5462139|PMID:22869374)
RGD PMID:22869374, PMID:22958920, PMID:21873635 MGI:5444069, MGI:5462139, RGD:13792537 NCBI chr 2:124,048,513...124,057,026
Ensembl chr 2:124,054,282...124,056,795
JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 ISO MGI:3521669 (MGI:3512844|PMID:15539463) RGD PMID:15539463 MGI:3512844 NCBI chr19:11,385,921...11,421,523
Ensembl chr19:11,386,024...11,421,498
JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 ISO MGI:2384917|MGI:3045473|MGI:3055492 (MGI:3717936|PMID:17591906), (MGI:3784949|PMID:16794820), (MGI:4940001|PMID:20398886), (MGI:4949555|PMID:21444805), (MGI:5525015|PMID:23943788) RGD PMID:16794820, PMID:17591906, PMID:20398886, PMID:21444805, PMID:23943788 MGI:3717936, MGI:3784949, MGI:4940001, MGI:4949555, MGI:5525015 NCBI chr 8:64,115,005...64,154,432
Ensembl chr 8:64,121,392...64,154,396
JBrowse link
G Bsg basigin (Ok blood group) ISO
ISS
(PMID:25957687)
(MGI:6436439|PMID:25957687)
GO_REF:0000024
RGD
UniProt
PMID:25957687 GO_REF:0000024, MGI:6436439 NCBI chr 7:12,875,536...12,882,753
Ensembl chr 7:12,875,537...12,882,753
JBrowse link
G Cdh23 cadherin-related 23 ISO
IEA
(PMID:16679490)
GO_REF:0000107
RGD
Ensembl
PMID:16679490 GO_REF:0000107 NCBI chr20:29,857,018...30,263,758
Ensembl chr20:29,857,637...29,990,111
JBrowse link
G Cdhr1 cadherin-related family member 1 ISO (PMID:20805371)
MGI:3046299 (MGI:2154844|PMID:11738025)
RGD PMID:11738025, PMID:20805371 MGI:2154844 NCBI chr16:14,328,161...14,348,049
Ensembl chr16:14,328,160...14,348,046
JBrowse link
G Cep290 centrosomal protein 290 ISO MGI:2143311|MGI:3624136 (MGI:5525015|PMID:23943788) RGD PMID:23943788 MGI:5525015 NCBI chr 7:40,217,269...40,306,327
Ensembl chr 7:40,217,269...40,306,327
JBrowse link
G Cib2 calcium and integrin binding family member 2 ISS
ISO
GO_REF:0000024
(MGI:5487486|PMID:23023331)
UniProt
RGD
PMID:23023331 GO_REF:0000024, MGI:5487486 NCBI chr 8:59,123,078...59,139,946
Ensembl chr 8:59,123,079...59,139,946
JBrowse link
G Clcn3 chloride voltage-gated channel 3 ISO MGI:2183297 (MGI:2182197|PMID:11182090) RGD PMID:11182090 MGI:2182197 NCBI chr16:32,448,821...32,520,649
Ensembl chr16:32,449,116...32,519,148
JBrowse link
G Cln8 CLN8, transmembrane ER and ERGIC protein ISO MGI:1856959 (MGI:1096072|PMID:9151333), (MGI:3695117|PMID:15565184) RGD PMID:9151333, PMID:15565184 MGI:1096072, MGI:3695117 NCBI chr16:79,828,321...79,838,212
Ensembl chr16:79,828,324...79,838,212
JBrowse link
G Clrn1 clarin 1 ISO
IEA
(PMID:15521980)
GO_REF:0000107
RGD
Ensembl
PMID:15521980 GO_REF:0000107 NCBI chr 2:149,049,925...149,088,787
Ensembl chr 2:149,049,925...149,088,787
JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 ISO MGI:3527896 (MGI:3527312|PMID:15634774) RGD PMID:15634774 MGI:3527312 NCBI chr19:10,142,440...10,206,618
Ensembl chr19:10,142,496...10,206,681
JBrowse link
G Crb1 crumbs cell polarity complex component 1 ISO (MGI:3696487|PMID:17234588), (MGI:5608935|PMID:25147295) RGD PMID:17234588, PMID:25147295 MGI:3696487, MGI:5608935 NCBI chr13:56,270,519...56,462,893
Ensembl chr13:56,270,781...56,462,834
JBrowse link
G Crocc ciliary rootlet coiled-coil, rootletin ISO MGI:3580447 (MGI:3580205|PMID:15870283) RGD PMID:15870283 MGI:3580205 NCBI chr 5:159,540,453...159,583,194
Ensembl chr 5:159,540,421...159,583,049
JBrowse link
G Dram2 DNA-damage regulated autophagy modulator 2 ISO
ISS
(PMID:25983245)
(MGI:5705208|PMID:25983245)
GO_REF:0000024
RGD
UniProt
PMID:25983245 GO_REF:0000024, MGI:5705208 NCBI chr 2:209,160,901...209,189,641
Ensembl chr 2:209,161,047...209,188,622
JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor ISO MGI:1932102 (MGI:3699047|PMID:17145777) RGD PMID:17145777 MGI:3699047 NCBI chr16:8,734,028...8,804,610
Ensembl chr16:8,734,035...8,804,610
JBrowse link
G Esrrb estrogen-related receptor beta ISS
ISO
GO_REF:0000024
(MGI:4457950|PMID:20534447)
UniProt
RGD
PMID:20534447 GO_REF:0000024, MGI:4457950 NCBI chr 6:110,360,940...110,458,406
Ensembl chr 6:110,410,141...110,455,906
JBrowse link
G Iqcb1 IQ motif containing B1 ISO (PMID:15723066) RGD PMID:15723066 NCBI chr11:66,824,059...66,878,585
Ensembl chr11:66,824,065...66,878,551
JBrowse link
G Lca5 lebercilin LCA5 ISS
ISO
GO_REF:0000024
(MGI:5050784|PMID:21606596)
UniProt
RGD
PMID:21606596 GO_REF:0000024, MGI:5050784 NCBI chr 8:90,926,309...90,984,271
Ensembl chr 8:90,926,311...90,984,224
JBrowse link
G Mak male germ cell-associated kinase ISS
ISO
GO_REF:0000024
MGI:2179972 (MGI:5298333|PMID:21148103)
UniProt
RGD
PMID:21148103 GO_REF:0000024, MGI:5298333 NCBI chr17:21,531,651...21,567,742
Ensembl chr17:21,521,505...21,568,440
JBrowse link
G Map1a microtubule-associated protein 1A ISO MGI:109571|MGI:2651573 (MGI:5489838|PMID:22323461) RGD PMID:22323461 MGI:5489838 NCBI chr 3:113,251,918...113,272,193
Ensembl chr 3:113,251,778...113,272,186
JBrowse link
G Mdm1 Mdm1 nuclear protein ISO MGI:2664155 (MGI:3822263|PMID:18805803) RGD PMID:18805803 MGI:3822263 NCBI chr 7:61,165,652...61,200,865
Ensembl chr 7:61,165,640...61,200,879
JBrowse link
G Mkks McKusick-Kaufman syndrome ISO MGI:3526444|MGI:3608879 (MGI:3581923|PMID:15772095), (MGI:3607949|PMID:16170314) RGD PMID:15772095, PMID:16170314 MGI:3581923, MGI:3607949 NCBI chr 3:129,866,542...129,885,213
Ensembl chr 3:129,866,545...129,884,810
JBrowse link
G Nphp3 nephrocystin 3 ISO (PMID:12872122) RGD PMID:12872122 NCBI chr 8:112,526,553...112,575,745
Ensembl chr 8:112,526,553...112,575,745
JBrowse link
G Nphp4 nephrocystin 4 ISO MGI:3032515 (MGI:4867588|PMID:21078623) RGD PMID:21078623 MGI:4867588 NCBI chr 5:169,647,581...169,744,662
Ensembl chr 5:169,659,188...169,744,660
JBrowse link
G Nxnl1 nucleoredoxin-like 1 ISO (PMID:25957687)
(MGI:6436439|PMID:25957687)
RGD PMID:25957687 MGI:6436439 NCBI chr16:19,992,211...19,996,815
Ensembl chr16:19,992,984...19,996,836
JBrowse link
G Nxnl2 nucleoredoxin-like 2 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:14,053,896...14,058,642
Ensembl chr17:14,053,896...14,058,642
JBrowse link
G Pcdh15 protocadherin related 15 ISO (PMID:11398101) RGD PMID:11398101 NCBI chr20:14,952,213...15,334,745
Ensembl chr20:14,952,213...15,334,745
JBrowse link
G Pde6a phosphodiesterase 6A ISO MGI:4867884 (MGI:5587955|PMID:22183357) RGD PMID:22183357 MGI:5587955 NCBI chr18:56,544,652...56,617,480
Ensembl chr18:56,544,652...56,617,480
JBrowse link
G Prom1 prominin 1 ISO
IBA
(PMID:18654668)
PMID:21873635
RGD PMID:18654668, PMID:21873635 RGD:13792537 NCBI chr14:71,532,321...71,637,400
Ensembl chr14:71,533,063...71,637,417
JBrowse link
G Rho rhodopsin IEA
ISO
GO_REF:0000107
MGI:5609882 (MGI:5587955|PMID:22183357)
Ensembl
RGD
PMID:22183357 GO_REF:0000107, MGI:5587955 NCBI chr 4:147,832,136...147,837,298
Ensembl chr 4:147,832,136...147,837,298
JBrowse link
G Rp1 RP1, axonemal microtubule associated ISO (MGI:3604930|PMID:16126734) RGD PMID:16126734 MGI:3604930 NCBI chr 5:15,005,028...15,060,508
Ensembl chr 5:15,043,955...15,060,508
JBrowse link
G Rp1l1 RP1 like 1 ISO (PMID:23281133)
(MGI:4353917|PMID:19657028)
RGD PMID:19657028, PMID:23281133 MGI:4353917 NCBI chr15:47,344,380...47,384,461
Ensembl chr15:47,373,120...47,383,508
JBrowse link
G Slc2a1 solute carrier family 2 member 1 ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:138,154,677...138,182,897
Ensembl chr 5:138,154,673...138,182,897
JBrowse link
G Spata7 spermatogenesis associated 7 IEA
ISO
IBA
ISS
GO_REF:0000107
(MGI:5608598|PMID:25398945)
PMID:21873635
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:25398945, PMID:21873635 GO_REF:0000024, GO_REF:0000107, MGI:5608598, RGD:13792537 NCBI chr 6:122,603,248...122,648,718
Ensembl chr 6:122,603,269...122,648,699
JBrowse link
G Tub TUB bipartite transcription factor ISO MGI:1857081 (MGI:1352376|PMID:10629044) RGD PMID:10629044 MGI:1352376 NCBI chr 1:173,550,929...173,629,550
Ensembl chr 1:173,607,101...173,625,550
JBrowse link
G Tulp1 TUB like protein 1 ISO MGI:1857081|MGI:1859921|MGI:4867883 (MGI:1352266|PMID:10607826), (MGI:2388540|PMID:10549638), (MGI:3717940|PMID:17525220), (MGI:4397555|PMID:19218615), (MGI:5587955|PMID:22183357) RGD PMID:10549638, PMID:10607826, PMID:17525220, PMID:19218615, PMID:22183357 MGI:1352266, MGI:2388540, MGI:3717940, MGI:4397555, MGI:5587955 NCBI chr20:7,931,673...7,943,601
Ensembl chr20:7,931,674...7,943,575
JBrowse link
G Ush1c USH1 protein network component harmonin ISO (PMID:11398101) RGD PMID:11398101 NCBI chr 1:102,207,096...102,256,779
Ensembl chr 1:102,207,096...102,255,459
JBrowse link
G Ush1g USH1 protein network component sans ISO (PMID:11398101) RGD PMID:11398101 NCBI chr10:103,866,566...103,873,416
Ensembl chr10:103,869,377...103,873,246
JBrowse link
G Ush2a usherin ISO (PMID:10090909)
MGI:3702040 (MGI:3700725|PMID:17360538)
RGD PMID:10090909, PMID:17360538 MGI:3700725 NCBI chr13:106,750,738...107,434,195
Ensembl chr13:106,751,625...107,427,329
JBrowse link
G Usp45 ubiquitin specific peptidase 45 ISO (MGI:6383248|PMID:30573563) RGD PMID:30573563 MGI:6383248 NCBI chr 5:35,916,763...35,984,525
Ensembl chr 5:35,916,804...35,984,524
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20020
    multicellular organismal process 9047
      photoreceptor cell maintenance 46
Path 2
Term Annotations click to browse term
  biological_process 20020
    biological regulation 13769
      regulation of biological quality 4280
        homeostatic process 2076
          multicellular organismal homeostasis 552
            tissue homeostasis 283
              retina homeostasis 77
                photoreceptor cell maintenance 46
paths to the root

NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.