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ONTOLOGY REPORT - ANNOTATIONS


Term:photoreceptor cell maintenance
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Accession:GO:0045494 term browser browse the term
Definition:Any process preventing the degeneration of the photoreceptor, a specialized cell type that is sensitive to light.



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photoreceptor cell maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca4 ATP binding cassette subfamily A member 4 acts_upstream_of_or_within ISO MGI:1857860 (MGI:2136674|PMID:11431429) RGD PMID:11431429 MGI:2136674 NCBI chr 2:210,164,813...210,302,069
Ensembl chr 2:210,164,813...210,302,069
JBrowse link
G Adgrv1 adhesion G protein-coupled receptor V1 involved_in ISO (PMID:14740321) RGD PMID:14740321 NCBI chr 2:11,331,434...11,911,713
Ensembl chr 2:11,331,442...11,911,688
JBrowse link
G Atp1b2 ATPase Na+/K+ transporting subunit beta 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:69165|PMID:7525597)
Ensembl
RGD
PMID:7525597 GO_REF:0000107 MGI:69165 NCBI chr10:54,318,698...54,324,933
Ensembl chr10:54,318,701...54,324,933
JBrowse link
G Bbs1 Bardet-Biedl syndrome 1 involved_in ISO (PMID:17980398) RGD PMID:17980398 NCBI chr 1:202,184,812...202,204,118
Ensembl chr 1:202,186,125...202,204,086
JBrowse link
G Bbs10 Bardet-Biedl syndrome 10 involved_in ISO (PMID:17980398) RGD PMID:17980398 NCBI chr 7:46,751,028...46,754,132
Ensembl chr 7:46,750,993...46,754,141
JBrowse link
G Bbs12 Bardet-Biedl syndrome 12 acts_upstream_of_or_within
involved_in
ISO
IBA
MGI:5444297 (MGI:5444069|PMID:22958920), (MGI:5462139|PMID:22869374)
PMID:21873635
RGD PMID:22869374 PMID:22958920 PMID:21873635 MGI:5444069 MGI:5462139, RGD:13792537 NCBI chr 2:120,203,396...120,221,024
Ensembl chr 2:120,203,428...120,219,255
JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within ISO MGI:3521669 (MGI:3512844|PMID:15539463) RGD PMID:15539463 MGI:3512844 NCBI chr19:10,909,653...10,944,998
Ensembl chr19:10,909,619...10,944,993
JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 acts_upstream_of_or_within ISO MGI:2384917|MGI:3045473|MGI:3055492 (MGI:3717936|PMID:17591906), (MGI:3784949|PMID:16794820), (MGI:4940001|PMID:20398886), (MGI:4949555|PMID:21444805), (MGI:5525015|PMID:23943788) RGD PMID:16794820 PMID:17591906 PMID:20398886 PMID:21444805 PMID:23943788 MGI:3717936 MGI:3784949 MGI:4940001 MGI:4949555 MGI:5525015 NCBI chr 8:59,731,912...59,765,408
Ensembl chr 8:59,731,912...59,765,607
JBrowse link
G Bsg basigin (Ok blood group) involved_in ISO
ISS
(PMID:25957687)
GO_REF:0000024
(MGI:6436439|PMID:25957687)
RGD
UniProt
PMID:25957687 GO_REF:0000024 MGI:6436439 NCBI chr 7:9,993,170...10,000,387
Ensembl chr 7:9,993,170...10,000,387
JBrowse link
G Cdh23 cadherin-related 23 involved_in ISO
IEA
(PMID:16679490)
GO_REF:0000107
RGD
Ensembl
PMID:16679490 GO_REF:0000107 NCBI chr20:28,240,643...28,622,490
Ensembl chr20:28,240,645...28,622,419
JBrowse link
G Cdhr1 cadherin-related family member 1 involved_in
acts_upstream_of_or_within
ISO (PMID:20805371)
MGI:3046299 (MGI:2154844|PMID:11738025)
RGD PMID:11738025 PMID:20805371 MGI:2154844 NCBI chr16:12,843,436...12,863,321
Ensembl chr16:12,843,437...12,863,396
JBrowse link
G Cep290 centrosomal protein 290 acts_upstream_of_or_within ISO MGI:2143311|MGI:3624136 (MGI:5525015|PMID:23943788) RGD PMID:23943788 MGI:5525015 NCBI chr 7:35,310,071...35,399,392
Ensembl chr 7:35,310,199...35,399,392
JBrowse link
G Cib2 calcium and integrin binding family member 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5487486|PMID:23023331)
UniProt
RGD
PMID:23023331 GO_REF:0000024 MGI:5487486 NCBI chr 8:54,930,265...54,947,157 JBrowse link
G Clcn3 chloride voltage-gated channel 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2183297 (MGI:2182197|PMID:11182090)
Ensembl
RGD
PMID:11182090 GO_REF:0000107 MGI:2182197 NCBI chr16:29,127,419...29,200,133
Ensembl chr16:29,127,419...29,200,119
JBrowse link
G Cln8 CLN8, transmembrane ER and ERGIC protein acts_upstream_of_or_within ISO MGI:1856959 (MGI:1096072|PMID:9151333), (MGI:3695117|PMID:15565184) RGD PMID:9151333 PMID:15565184 MGI:1096072 MGI:3695117 NCBI chr16:74,749,662...74,759,553
Ensembl chr16:74,749,662...74,759,774
JBrowse link
G Clrn1 clarin 1 involved_in ISO
IEA
(PMID:15521980)
GO_REF:0000107
RGD
Ensembl
PMID:15521980 GO_REF:0000107 NCBI chr 2:143,084,030...143,130,948
Ensembl chr 2:143,084,030...143,130,948
JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 acts_upstream_of_or_within ISO MGI:3527896 (MGI:3527312|PMID:15634774) RGD PMID:15634774 MGI:3527312 NCBI chr19:9,726,595...9,791,111
Ensembl chr19:9,726,595...9,791,173
JBrowse link
G Crb1 crumbs cell polarity complex component 1 acts_upstream_of_or_within ISO (MGI:3696487|PMID:17234588), (MGI:5608935|PMID:25147295) RGD PMID:17234588 PMID:25147295 MGI:3696487 MGI:5608935 NCBI chr13:50,801,484...50,989,261
Ensembl chr13:50,800,959...50,989,261
JBrowse link
G Crb2 crumbs cell polarity complex component 2 involved_in ISO (MGI:5461109|PMID:23001562) RGD PMID:23001562 MGI:5461109 NCBI chr 3:21,542,138...21,564,876
Ensembl chr 3:21,542,221...21,563,294
JBrowse link
G Crocc ciliary rootlet coiled-coil, rootletin acts_upstream_of_or_within ISO MGI:3580447 (MGI:3580205|PMID:15870283) RGD PMID:15870283 MGI:3580205 NCBI chr 5:153,320,962...153,363,734
Ensembl chr 5:153,320,962...153,363,578
JBrowse link
G Dram2 DNA damage regulated autophagy modulator 2 involved_in ISO
ISS
IBA
(PMID:25983245)
GO_REF:0000024
(MGI:5705208|PMID:25983245)
PMID:21873635
RGD
UniProt
PMID:25983245 PMID:21873635 GO_REF:0000024 MGI:5705208, RGD:13792537 NCBI chr 2:194,035,624...194,064,415
Ensembl chr 2:194,035,818...194,063,403
JBrowse link
G Ercc6 ERCC excision repair 6, chromatin remodeling factor acts_upstream_of_or_within ISO MGI:1932102 (MGI:3699047|PMID:17145777) RGD PMID:17145777 MGI:3699047 NCBI chr16:7,764,983...7,835,587
Ensembl chr16:7,765,013...7,835,587
JBrowse link
G Esrrb estrogen-related receptor beta involved_in ISS
ISO
GO_REF:0000024
(MGI:4457950|PMID:20534447)
UniProt
RGD
PMID:20534447 GO_REF:0000024 MGI:4457950 NCBI chr 6:106,007,662...106,163,136
Ensembl chr 6:106,008,095...106,160,791
JBrowse link
G Iqcb1 IQ motif containing B1 involved_in ISO (PMID:15723066) RGD PMID:15723066 NCBI chr11:63,905,595...63,960,141
Ensembl chr11:63,905,590...63,960,093
JBrowse link
G Lca5 lebercilin LCA5 acts_upstream_of_or_within ISS
ISO
GO_REF:0000024
(MGI:5050784|PMID:21606596)
UniProt
RGD
PMID:21606596 GO_REF:0000024 MGI:5050784 NCBI chr 8:84,307,696...84,375,025
Ensembl chr 8:84,317,659...84,374,956
JBrowse link
G Mak male germ cell-associated kinase involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2179972 (MGI:5298333|PMID:21148103)
UniProt
RGD
PMID:21148103 GO_REF:0000024 MGI:5298333 NCBI chr17:23,683,674...23,731,125
Ensembl chr17:23,693,878...23,730,001
JBrowse link
G Map1a microtubule-associated protein 1A acts_upstream_of_or_within ISO MGI:109571|MGI:2651573 (MGI:5489838|PMID:22323461) RGD PMID:22323461 MGI:5489838 NCBI chr 3:108,263,217...108,283,936
Ensembl chr 3:108,263,151...108,282,899
JBrowse link
G Mdm1 Mdm1 nuclear protein acts_upstream_of_or_within ISO MGI:2664155 (MGI:3822263|PMID:18805803) RGD PMID:18805803 MGI:3822263 NCBI chr 7:53,729,603...53,766,034
Ensembl chr 7:53,729,610...53,766,034
JBrowse link
G Mkks MKKS centrosomal shuttling protein acts_upstream_of_or_within ISO MGI:3526444|MGI:3608879 (MGI:3581923|PMID:15772095), (MGI:3607949|PMID:16170314) RGD PMID:15772095 PMID:16170314 MGI:3581923 MGI:3607949 NCBI chr 3:124,201,877...124,221,142
Ensembl chr 3:124,201,877...124,220,162
JBrowse link
G Nphp3 nephrocystin 3 involved_in ISO (PMID:12872122) RGD PMID:12872122 NCBI chr 8:104,621,908...104,662,383
Ensembl chr 8:104,621,864...104,662,383
JBrowse link
G Nphp4 nephrocystin 4 acts_upstream_of_or_within ISO MGI:3032515 (MGI:4867588|PMID:21078623) RGD PMID:21078623 MGI:4867588 NCBI chr 5:162,986,157...163,073,708
Ensembl chr 5:162,988,370...163,073,706
JBrowse link
G Nxnl1 nucleoredoxin-like 1 involved_in ISO (PMID:25957687)
(MGI:6436439|PMID:25957687)
RGD PMID:25957687 MGI:6436439 NCBI chr16:18,270,604...18,279,797
Ensembl chr16:18,262,688...18,279,987
JBrowse link
G Nxnl2 nucleoredoxin-like 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:14,031,151...14,035,897
Ensembl chr17:14,031,153...14,036,189
JBrowse link
G Pcdh15 protocadherin related 15 involved_in ISO (PMID:11398101) RGD PMID:11398101 NCBI chr20:13,997,094...15,496,446
Ensembl chr20:13,963,565...15,494,719
JBrowse link
G Pde6a phosphodiesterase 6A acts_upstream_of_or_within ISO MGI:4867884 (MGI:5587955|PMID:22183357) RGD PMID:22183357 MGI:5587955 NCBI chr18:54,676,863...54,749,644
Ensembl chr18:54,676,863...54,748,816
JBrowse link
G Prom1 prominin 1 involved_in IBA
ISO
PMID:21873635
(PMID:18654668)
RGD PMID:18654668 PMID:21873635 RGD:13792537 NCBI chr14:66,989,545...67,094,534
Ensembl chr14:66,990,160...67,094,527
JBrowse link
G Rho rhodopsin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:6508517|PMID:32312889)
MGI:5609882 (MGI:5587955|PMID:22183357)
Ensembl
RGD
PMID:22183357 PMID:32312889 GO_REF:0000107 MGI:5587955 MGI:6508517 NCBI chr 4:148,975,597...148,988,693
Ensembl chr 4:148,980,611...148,985,773
JBrowse link
G Rp1 RP1, axonemal microtubule associated involved_in ISO (MGI:3604930|PMID:16126734) RGD PMID:16126734 MGI:3604930 NCBI chr 5:15,121,104...15,582,363
Ensembl chr 5:15,121,133...15,579,363
JBrowse link
G Rp1l1 RP1 like 1 involved_in ISO (PMID:23281133)
(MGI:4353917|PMID:19657028)
RGD PMID:19657028 PMID:23281133 MGI:4353917 NCBI chr15:38,259,595...38,271,269
Ensembl chr15:38,259,928...38,270,316
JBrowse link
G Slc2a1 solute carrier family 2 member 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 5:132,717,196...132,745,416
Ensembl chr 5:132,717,196...132,745,416
JBrowse link
G Spata7 spermatogenesis associated 7 involved_in IBA
IEA
ISO
ISS
PMID:21873635
GO_REF:0000107
(MGI:5608598|PMID:25398945)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:25398945 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:5608598, RGD:13792537 NCBI chr 6:117,879,828...117,925,284
Ensembl chr 6:117,879,823...117,925,284
JBrowse link
G Tub TUB bipartite transcription factor acts_upstream_of_or_within ISO MGI:1857081 (MGI:1352376|PMID:10629044) RGD PMID:10629044 MGI:1352376 NCBI chr 1:163,008,198...163,030,958
Ensembl chr 1:162,951,931...163,026,812
JBrowse link
G Tulp1 TUB like protein 1 involved_in
acts_upstream_of_or_within
ISO (MGI:4397555|PMID:19218615)
MGI:1857081|MGI:1859921|MGI:4867883 (MGI:1352266|PMID:10607826), (MGI:2388540|PMID:10549638), (MGI:3717940|PMID:17525220), (MGI:5587955|PMID:22183357)
RGD PMID:10549638 PMID:10607826 PMID:17525220 PMID:19218615 PMID:22183357 MGI:1352266 MGI:2388540 MGI:3717940 MGI:4397555 MGI:5587955 NCBI chr20:6,412,170...6,424,312
Ensembl chr20:6,412,171...6,424,073
JBrowse link
G Ush1c USH1 protein network component harmonin involved_in ISO (PMID:11398101) RGD PMID:11398101 NCBI chr 1:96,695,303...96,743,671
Ensembl chr 1:96,695,307...96,743,671
JBrowse link
G Ush1g USH1 protein network component sans involved_in ISO (PMID:11398101) RGD PMID:11398101 NCBI chr10:100,559,721...100,563,590
Ensembl chr10:100,557,629...100,563,590
JBrowse link
G Ush2a usherin involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:10090909)
MGI:3702040 (MGI:3700725|PMID:17360538)
GO_REF:0000107
RGD
Ensembl
PMID:10090909 PMID:17360538 GO_REF:0000107 MGI:3700725 NCBI chr13:99,837,445...100,503,935
Ensembl chr13:99,837,445...100,503,922
JBrowse link
G Usp45 ubiquitin specific peptidase 45 involved_in ISO (MGI:6383248|PMID:30573563) RGD PMID:30573563 MGI:6383248 NCBI chr 5:35,318,621...35,392,090
Ensembl chr 5:35,318,635...35,389,420
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19874
    multicellular organismal process 9240
      photoreceptor cell maintenance 47
Path 2
Term Annotations click to browse term
  biological_process 19874
    multicellular organismal process 9240
      multicellular organismal homeostasis 879
        anatomical structure homeostasis 285
          tissue homeostasis 285
            retina homeostasis 80
              photoreceptor cell maintenance 47
paths to the root