ONTOLOGY REPORT - ANNOTATIONS
Term: endothelial cell differentiation
Accession: GO:0045446
browse the term
Definition: The process in which a mesodermal, bone marrow or neural crest cell acquires specialized features of an endothelial cell, a thin flattened cell. A layer of such cells lines the inside surfaces of body cavities, blood vessels, and lymph vessels, making up the endothelium.
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Barx1
BARX homeobox 1
acts_upstream_of_or_within
ISO
(MGI:3577819|PMID:15809042)
RGD
PMID:15809042
MGI:3577819
NCBI chr17:15,990,412...15,993,887
Ensembl chr17:15,990,412...15,993,887
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Cxcr4
C-X-C motif chemokine receptor 4
IMP
RGD
PMID:24955809
RGD:11352686
NCBI chr13:40,077,976...40,081,883
Ensembl chr13:40,077,976...40,081,883
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Fstl1
follistatin-like 1
involved_in
ISO ISS
(MGI:4457221|PMID:20054002) GO_REF:0000024
RGD UniProt
PMID:20054002
GO_REF:0000024 MGI:4457221
NCBI chr11:62,895,391...62,948,581
Ensembl chr11:62,779,783...62,948,677
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Fzd1
frizzled class receptor 1
acts_upstream_of_or_within
ISO
MGI:103124 (MGI:3577819|PMID:15809042)
RGD
PMID:15809042
MGI:3577819
NCBI chr 4:29,310,303...29,314,701
Ensembl chr 4:29,310,091...29,312,643 Ensembl chr 4:29,310,091...29,312,643
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Fzd2
frizzled class receptor 2
acts_upstream_of_or_within involved_in
ISO IEA
MGI:103124 (MGI:3577819|PMID:15809042) GO_REF:0000107
RGD Ensembl
PMID:15809042
GO_REF:0000107 MGI:3577819
NCBI chr10:87,561,866...87,563,776
Ensembl chr10:87,561,326...87,565,334
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Fzd4
frizzled class receptor 4
acts_upstream_of_or_within
ISO
(MGI:5468198|PMID:23217714)
RGD
PMID:23217714
MGI:5468198
NCBI chr 1:143,280,065...143,288,799
Ensembl chr 1:143,280,065...143,285,724
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Hoxb5
homeo box B5
acts_upstream_of_or_within
ISO
(MGI:2670246|PMID:12897140)
RGD
PMID:12897140
MGI:2670246
NCBI chr10:81,269,372...81,271,580
Ensembl chr10:81,269,372...81,271,580
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Kdm6b
lysine demethylase 6B
involved_in
ISO
(MGI:5574281|PMID:23856522)
RGD
PMID:23856522
MGI:5574281
NCBI chr10:54,120,716...54,142,212
Ensembl chr10:54,121,848...54,130,794
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Kdr
kinase insert domain receptor
involved_in acts_upstream_of_or_within
IBA ISO
PMID:21873635 (MGI:2670246|PMID:12897140), (MGI:5543371|PMID:18772315)
RGD
PMID:12897140 PMID:18772315 PMID:21873635
MGI:2670246 MGI:5543371 , RGD:13792537
NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
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Mesp1
mesoderm posterior bHLH transcription factor 1
involved_in
ISO
(PMID:18297060)
RGD
PMID:18297060
NCBI chr 1:133,738,357...133,739,875
Ensembl chr 1:133,738,357...133,739,875
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Ndp
norrin cystine knot growth factor NDP
acts_upstream_of_or_within
ISO
(MGI:5468198|PMID:23217714)
RGD
PMID:23217714
MGI:5468198
NCBI chr X:5,796,487...5,820,934
Ensembl chr X:5,796,487...5,820,934
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Notch4
notch receptor 4
IDA
RGD
PMID:10964583
RGD:1304484
NCBI chr20:4,160,362...4,184,466
Ensembl chr20:4,160,445...4,184,465
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Ptn
pleiotrophin
IEP
RGD
PMID:20830586
RGD:9686141
NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456
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S1pr1
sphingosine-1-phosphate receptor 1
IEP
RGD
PMID:7959012
RGD:61573
NCBI chr 2:203,624,752...203,629,110
Ensembl chr 2:203,621,587...203,629,681
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Setsip
SET like protein
involved_in
ISO
(PMID:22869753)
RGD
PMID:22869753
NCBI chr19:53,561,262...53,562,780
Ensembl chr19:53,561,190...53,563,819
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Vhl
von Hippel-Lindau tumor suppressor
acts_upstream_of
ISO
MGI:2136645|MGI:3608931 (MGI:5618205|PMID:25186293)
RGD
PMID:25186293
MGI:5618205
NCBI chr 4:146,772,483...146,779,376
Ensembl chr 4:146,772,468...146,779,377
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Hey1
hes-related family bHLH transcription factor with YRPW motif 1
involved_in
ISO
UniProtKB:Q9QUS4 (MGI:3040159|PMID:15107403)
RGD
PMID:15107403
MGI:3040159
NCBI chr 2:93,096,706...93,100,316
Ensembl chr 2:93,095,498...93,100,312
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Hey2
hes-related family bHLH transcription factor with YRPW motif 2
involved_in
ISO
UniProtKB:Q9WV93 (MGI:3040159|PMID:15107403)
RGD
PMID:15107403
MGI:3040159
NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
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Notch1
notch receptor 1
involved_in
ISO
(MGI:3040159|PMID:15107403)
RGD
PMID:15107403
MGI:3040159
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
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Tmem100
transmembrane protein 100
acts_upstream_of_or_within
ISO
MGI:5432904|MGI:5432905 (MGI:5432418|PMID:22783020)
RGD
PMID:22783020
MGI:5432418
NCBI chr10:74,854,779...74,861,147
Ensembl chr10:74,854,468...74,862,941
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Rbpj
recombination signal binding protein for immunoglobulin kappa J region
involved_in
ISO
(MGI:3056004|PMID:15466160)
RGD
PMID:15466160
MGI:3056004
NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353
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Ccm2
CCM2 scaffold protein
acts_upstream_of_or_within
ISO
MGI:3512761 (MGI:3837878|PMID:19151727)
RGD
PMID:19151727
MGI:3837878
NCBI chr14:81,418,418...81,464,114
Ensembl chr14:81,418,236...81,464,116
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Hey1
hes-related family bHLH transcription factor with YRPW motif 1
acts_upstream_of_or_within
ISO
MGI:1341884 (MGI:3040159|PMID:15107403)
RGD
PMID:15107403
MGI:3040159
NCBI chr 2:93,096,706...93,100,316
Ensembl chr 2:93,095,498...93,100,312
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Hey2
hes-related family bHLH transcription factor with YRPW motif 2
acts_upstream_of_or_within
ISO
MGI:1341800 (MGI:3040159|PMID:15107403)
RGD
PMID:15107403
MGI:3040159
NCBI chr 1:26,822,131...26,832,218
Ensembl chr 1:26,822,131...26,832,218
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Kdr
kinase insert domain receptor
acts_upstream_of_or_within involved_in
ISO IEA
MGI:3530468 (MGI:3529425|PMID:15644447) GO_REF:0000107
RGD Ensembl
PMID:15644447
GO_REF:0000107 MGI:3529425
NCBI chr14:32,217,871...32,261,018
Ensembl chr14:32,217,871...32,261,018
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Lipa
lipase A, lysosomal acid type
acts_upstream_of_or_within involved_in
ISO IEA
MGI:6364606 (MGI:6510385|PMID:33357458) GO_REF:0000107
RGD Ensembl
PMID:33357458
GO_REF:0000107 MGI:6510385
NCBI chr 1:232,024,351...232,167,329
Ensembl chr 1:232,024,356...232,057,633
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Prox1
prospero homeobox 1
acts_upstream_of_or_within
ISO
MGI:2386336 (MGI:2177970|PMID:11927535)
RGD
PMID:11927535
MGI:2177970
NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
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Rbpj
recombination signal binding protein for immunoglobulin kappa J region
involved_in
ISO
UniProtKB:P52800 (MGI:3056004|PMID:15466160)
RGD
PMID:15466160
MGI:3056004
NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353
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Notch1
notch receptor 1
involved_in
ISO
(MGI:4837019|PMID:20890042)
RGD
PMID:20890042
MGI:4837019
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
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Nrg1
neuregulin 1
involved_in
ISO IEA
(PMID:17336907) GO_REF:0000107
RGD Ensembl
PMID:17336907
GO_REF:0000107
NCBI chr16:59,250,658...60,303,024
Ensembl chr16:59,250,854...60,296,884
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Smad4
SMAD family member 4
involved_in
IEA ISO
GO_REF:0000107 (MGI:4946551|PMID:21330551)
Ensembl RGD
PMID:21330551
GO_REF:0000107 MGI:4946551
NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438
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Sox17
SRY-box transcription factor 17
acts_upstream_of_or_within
ISO
MGI:103559 (MGI:3716256|PMID:17610846)
RGD
PMID:17610846
MGI:3716256
NCBI chr 5:15,016,660...15,022,228
Ensembl chr 5:15,016,731...15,022,228
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Sox18
SRY-box transcription factor 18
acts_upstream_of_or_within
ISO
MGI:107543 (MGI:3716256|PMID:17610846)
RGD
PMID:17610846
MGI:3716256
NCBI chr 3:168,785,488...168,787,290
Ensembl chr 3:168,785,490...168,787,290
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Acvr1
activin A receptor type 1
involved_in
ISO
(PMID:19506109)
RGD
PMID:19506109
NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241
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Ccm2
CCM2 scaffold protein
acts_upstream_of_or_within
ISO
MGI:1924696|MGI:3512761 (MGI:3837878|PMID:19151727)
RGD
PMID:19151727
MGI:3837878
NCBI chr14:81,418,418...81,464,114
Ensembl chr14:81,418,236...81,464,116
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Gpx1
glutathione peroxidase 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2158814 (MGI:3698597|PMID:16373599)
Ensembl RGD
PMID:16373599
GO_REF:0000107 MGI:3698597
NCBI chr 8:109,026,905...109,028,031
Ensembl chr 8:109,026,905...109,028,024
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Heg1
heart development protein with EGF-like domains 1
acts_upstream_of_or_within
ISO
MGI:2384924 (MGI:3837878|PMID:19151727)
RGD
PMID:19151727
MGI:3837878
NCBI chr11:67,006,954...67,095,020
Ensembl chr11:66,957,190...67,095,051
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Ubiad1
UbiA prenyltransferase domain containing 1
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr 5:158,856,582...158,880,490
Ensembl chr 5:158,868,672...158,880,271
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Vezf1
vascular endothelial zinc finger 1
acts_upstream_of_or_within
ISO
MGI:3583268 (MGI:3581991|PMID:15882861)
RGD
PMID:15882861
MGI:3581991
NCBI chr10:72,859,669...72,876,111
Ensembl chr10:72,859,877...72,876,111
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Hoxa13
homeo box A13
acts_upstream_of_or_within
ISO
MGI:2152356 (MGI:3797428|PMID:18483557)
RGD
PMID:18483557
MGI:3797428
NCBI chr 4:81,358,956...81,361,091
Ensembl chr 4:81,358,956...81,361,091
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Arhgef26
Rho guanine nucleotide exchange factor 26
acts_upstream_of_or_within
ISO
MGI:5500046 (MGI:5486234|PMID:23372835)
RGD
PMID:23372835
MGI:5486234
NCBI chr 2:146,740,336...146,850,918
Ensembl chr 2:146,739,631...146,850,819
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Clic4
chloride intracellular channel 4
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3838012 (MGI:3837628|PMID:19197003)
Ensembl RGD
PMID:19197003
GO_REF:0000107 MGI:3837628
NCBI chr 5:147,456,819...147,513,278
Ensembl chr 5:147,453,712...147,513,452
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Cnmd
chondromodulin
acts_upstream_of_or_within
ISO
(MGI:2656472|PMID:12714610)
RGD
PMID:12714610
MGI:2656472
NCBI chr15:55,041,548...55,066,297
Ensembl chr15:55,041,561...55,066,297
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Col18a1
collagen type XVIII alpha 1 chain
acts_upstream_of_or_within
ISO
(MGI:3046127|PMID:15188432)
RGD
PMID:15188432
MGI:3046127
NCBI chr20:11,474,104...11,582,593
Ensembl chr20:11,474,104...11,582,593
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Heg1
heart development protein with EGF-like domains 1
acts_upstream_of_or_within
ISO
MGI:3838392 (MGI:3837878|PMID:19151727)
RGD
PMID:19151727
MGI:3837878
NCBI chr11:67,006,954...67,095,020
Ensembl chr11:66,957,190...67,095,051
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Hoxa13
homeo box A13
acts_upstream_of_or_within
ISO
MGI:2152356 (MGI:3797428|PMID:18483557)
RGD
PMID:18483557
MGI:3797428
NCBI chr 4:81,358,956...81,361,091
Ensembl chr 4:81,358,956...81,361,091
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Id1
inhibitor of DNA binding 1
acts_upstream_of_or_within
ISO
MGI:2679939 (MGI:3759000|PMID:17717145)
RGD
PMID:17717145
MGI:3759000
NCBI chr 3:141,210,666...141,212,420
Ensembl chr 3:141,211,267...141,212,419
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Ift88
intraflagellar transport 88
acts_upstream_of_or_within
ISO
MGI:2157527 (MGI:4940123|PMID:21285373)
RGD
PMID:21285373
MGI:4940123
NCBI chr15:31,573,325...31,666,068
Ensembl chr15:31,573,376...31,672,147
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Met
MET proto-oncogene, receptor tyrosine kinase
involved_in
ISO IEA
(PMID:14500721) GO_REF:0000107
RGD Ensembl
PMID:14500721
GO_REF:0000107
NCBI chr 4:45,790,456...45,898,139
Ensembl chr 4:45,790,791...45,897,876
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Notch4
notch receptor 4
IDA
RGD
PMID:10964583
RGD:1304484
NCBI chr20:4,160,362...4,184,466
Ensembl chr20:4,160,445...4,184,465
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Pecam1
platelet and endothelial cell adhesion molecule 1
acts_upstream_of_or_within
ISO
MGI:2677448 (MGI:3723364|PMID:17563397)
RGD
PMID:17563397
MGI:3723364
NCBI chr10:91,590,521...91,652,279
Ensembl chr10:91,590,521...91,652,116
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Plod3
procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
acts_upstream_of_or_within
ISO
MGI:3620600|MGI:3620601 (MGI:3618677|PMID:16467571)
RGD
PMID:16467571
MGI:3618677
NCBI chr12:19,676,384...19,686,945
Ensembl chr12:19,676,386...19,686,960
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Stc1
stanniocalcin 1
involved_in
ISO
(PMID:14500721)
RGD
PMID:14500721
NCBI chr15:44,299,591...44,311,695
Ensembl chr15:44,299,621...44,310,264
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Tnmd
tenomodulin
acts_upstream_of_or_within
ISO
(MGI:2656472|PMID:12714610)
RGD
PMID:12714610
MGI:2656472
NCBI chr X:97,057,137...97,072,634
Ensembl chr X:97,057,137...97,072,634
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Dll1
delta like canonical Notch ligand 1
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:5466218|PMID:22282195) GO_REF:0000024
Ensembl RGD UniProt
PMID:22282195
GO_REF:0000024 GO_REF:0000107 MGI:5466218
NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
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Agt
angiotensinogen
acts_upstream_of_or_within
ISO
MGI:2136636 (MGI:2385816|PMID:9734405)
RGD
PMID:9734405
MGI:2385816
NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
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Cldn1
claudin 1
IMP
RGD
PMID:22733753
RGD:11341802
NCBI chr11:74,421,569...74,436,728
Ensembl chr11:74,421,569...74,436,724
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Dmd
dystrophin
acts_upstream_of_or_within
ISO
MGI:1856328 (MGI:3612931|PMID:12673830)
RGD
PMID:12673830
MGI:3612931
NCBI chr X:47,272,324...49,504,219
Ensembl chr X:47,272,331...49,504,207
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Hapln2
hyaluronan and proteoglycan link protein 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:4437572 (MGI:4437139|PMID:20181608)
Ensembl RGD
PMID:20181608
GO_REF:0000107 MGI:4437139
NCBI chr 2:173,488,909...173,496,824
Ensembl chr 2:173,491,160...173,496,588
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Ren
renin
NOT|acts_upstream_of_or_within
ISO
MGI:2136642 (MGI:1351364|PMID:10617578)
RGD
PMID:10617578
MGI:1351364
NCBI chr13:44,796,260...44,807,491
Ensembl chr13:44,796,091...44,807,489
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Cldn5
claudin 5
involved_in
ISO
(PMID:24280217)
RGD
PMID:24280217
NCBI chr11:82,212,822...82,214,248
Ensembl chr11:82,211,475...82,214,992
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Ednra
endothelin receptor type A
involved_in
ISO
(MGI:6437578|PMID:27026367)
RGD
PMID:27026367
MGI:6437578
NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
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Ednrb
endothelin receptor type B
involved_in
ISO
(MGI:6437578|PMID:27026367)
RGD
PMID:27026367
MGI:6437578
NCBI chr15:80,640,839...80,672,115
Ensembl chr15:80,643,043...80,672,115
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Ezr
ezrin
involved_in
ISO
UniProtKB:P26038|UniProtKB:P35241 (PMID:23264465)
RGD
PMID:23264465
NCBI chr 1:46,967,961...47,011,505
Ensembl chr 1:46,967,658...47,011,505
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F2rl1
F2R like trypsin receptor 1
involved_in
ISO
(PMID:20826780)
RGD
PMID:20826780
NCBI chr 2:26,772,274...26,785,226
Ensembl chr 2:26,772,278...26,785,226
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Hpse
heparanase
involved_in
ISO IEA
(MGI:6437578|PMID:27026367) GO_REF:0000107
RGD Ensembl
PMID:27026367
GO_REF:0000107 MGI:6437578
NCBI chr14:8,896,593...8,937,011
Ensembl chr14:8,896,593...8,937,010
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Icam1
intercellular adhesion molecule 1
involved_in
ISO
UniProtKB:Q96S97 (PMID:23264465)
RGD
PMID:23264465
NCBI chr 8:19,553,063...19,565,438
Ensembl chr 8:19,553,645...19,565,438
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Marveld2
MARVEL domain containing 2
involved_in
ISO
(PMID:23073616)
RGD
PMID:23073616
NCBI chr 2:31,742,652...31,764,150
Ensembl chr 2:31,657,220...31,764,150
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Msn
moesin
involved_in
ISO
UniProtKB:P15311|UniProtKB:P35241 (PMID:23264465)
RGD
PMID:23264465
NCBI chr X:60,996,043...61,064,011
Ensembl chr X:60,995,951...61,065,628
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Myadm
myeloid-associated differentiation marker
involved_in
ISO IEA
(PMID:23264465) GO_REF:0000107
RGD Ensembl
PMID:23264465
GO_REF:0000107
NCBI chr 1:65,864,180...65,874,701
Ensembl chr 1:65,864,173...65,874,035
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Pde2a
phosphodiesterase 2A
involved_in
IDA
PMID:20139324
UniProt
PMID:20139324
RGD:8553884
NCBI chr 1:155,823,590...155,915,434
Ensembl chr 1:155,813,180...155,915,434
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Pde4d
phosphodiesterase 4D
involved_in
IDA
PMID:20139324
UniProt
PMID:20139324
RGD:8553884
NCBI chr 2:40,014,933...41,529,190
Ensembl chr 2:40,019,933...41,525,884
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Pecam1
platelet and endothelial cell adhesion molecule 1
involved_in
ISO
(PMID:7589563)
RGD
PMID:7589563
NCBI chr10:91,590,521...91,652,279
Ensembl chr10:91,590,521...91,652,116
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Ppp1r16b
protein phosphatase 1, regulatory subunit 16B
involved_in acts_upstream_of_or_within
ISO IBA
(PMID:18586956) (MGI:5604907|PMID:21907835) PMID:21873635
RGD
PMID:18586956 PMID:21907835 PMID:21873635
MGI:5604907 , RGD:13792537
NCBI chr 3:147,323,652...147,419,658
Ensembl chr 3:147,324,126...147,418,937
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Rap1a
RAP1A, member of RAS oncogene family
involved_in
ISO ISS
(PMID:21840392) GO_REF:0000024
RGD UniProt
PMID:21840392
GO_REF:0000024
NCBI chr 2:193,208,631...193,286,513
Ensembl chr 2:193,208,635...193,286,501
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Rap1b
RAP1B, member of RAS oncogene family
involved_in
ISO ISS
(PMID:21840392) GO_REF:0000024
RGD UniProt
PMID:21840392
GO_REF:0000024
NCBI chr 7:53,423,039...53,456,388
Ensembl chr 7:53,423,130...53,456,370
G
Rapgef1
Rap guanine nucleotide exchange factor 1
involved_in
ISO
(PMID:21840392)
RGD
PMID:21840392
NCBI chr 3:12,898,349...13,016,234
Ensembl chr 3:12,898,266...13,013,984
G
Rapgef2
Rap guanine nucleotide exchange factor 2
involved_in
ISS ISO
GO_REF:0000024 (PMID:21840392)
UniProt RGD
PMID:21840392
GO_REF:0000024
NCBI chr 2:164,207,513...164,322,157
Ensembl chr 2:164,207,513...164,244,247
G
Rapgef3
Rap guanine nucleotide exchange factor 3
involved_in
ISO ISS
(PMID:21840392) GO_REF:0000024
RGD UniProt
PMID:21840392
GO_REF:0000024
NCBI chr 7:128,875,772...128,898,203
Ensembl chr 7:128,875,773...128,898,521
G
Rdx
radixin
involved_in
ISO
UniProtKB:P15311|UniProtKB:P26038 (PMID:23264465)
RGD
PMID:23264465
NCBI chr 8:52,379,494...52,437,673
Ensembl chr 8:52,379,494...52,437,678
G
Robo4
roundabout guidance receptor 4
involved_in
ISO IEA
(PMID:30455415) GO_REF:0000107
RGD Ensembl
PMID:30455415
GO_REF:0000107
NCBI chr 8:37,119,966...37,133,887
Ensembl chr 8:37,119,988...37,132,519
G
Sox18
SRY-box transcription factor 18
involved_in
ISO
(PMID:18065521)
RGD
PMID:18065521
NCBI chr 3:168,785,488...168,787,290
Ensembl chr 3:168,785,490...168,787,290
G
Abcb1b
ATP-binding cassette, subfamily B (MDR/TAP), member 1B
IMP
RGD
PMID:16850390
RGD:1598561
NCBI chr 4:25,242,761...25,325,194
Ensembl chr 4:25,242,798...25,325,199
G
Cldn3
claudin 3
involved_in
ISO
(MGI:6368952|PMID:12734665)
RGD
PMID:12734665
MGI:6368952
NCBI chr12:21,708,538...21,710,010
Ensembl chr12:21,708,398...21,711,001
G
Foxp3
forkhead box P3
IEP
RGD
PMID:31027862
RGD:38549575
NCBI chr X:14,908,494...14,924,994
Ensembl chr X:14,908,494...14,923,838
G
Afdn
afadin, adherens junction formation factor
involved_in
ISO
(PMID:23885123)
RGD
PMID:23885123
NCBI chr 1:53,884,711...54,034,216
Ensembl chr 1:53,905,373...54,034,216
G
Cldn1
claudin 1
IMP
RGD
PMID:22684624
RGD:11341733
NCBI chr11:74,421,569...74,436,728
Ensembl chr11:74,421,569...74,436,724
G
F11r
F11 receptor
involved_in
ISO IBA
UniProtKB:Q9Y3L5 (PMID:23885123) PMID:21873635
RGD
PMID:23885123 PMID:21873635
RGD:13792537
NCBI chr13:83,873,797...83,897,388
Ensembl chr13:83,873,797...83,897,402
G
Fasn
fatty acid synthase
acts_upstream_of_or_within
ISO
MGI:3765070 (MGI:5630041|PMID:25565205)
RGD
PMID:25565205
MGI:5630041
NCBI chr10:106,072,093...106,090,259
Ensembl chr10:106,072,091...106,090,261
G
Icam1
intercellular adhesion molecule 1
IMP
RGD
PMID:10201790
RGD:11520782
NCBI chr 8:19,553,063...19,565,438
Ensembl chr 8:19,553,645...19,565,438
G
Mir874
microRNA 874
acts_upstream_of_or_within
ISO
(MGI:5551666|PMID:24462679)
RGD
PMID:24462679
MGI:5551666
NCBI chr17:6,620,649...6,620,724
Ensembl chr17:6,620,649...6,620,724
G
Myd88
MYD88, innate immune signal transduction adaptor
acts_upstream_of_or_within
ISO
MGI:2385681 (MGI:5306517|PMID:22155109)
RGD
PMID:22155109
MGI:5306517
NCBI chr 8:119,074,439...119,078,508
Ensembl chr 8:119,074,437...119,079,415
G
Ptprs
protein tyrosine phosphatase, receptor type, S
acts_upstream_of_or_within
ISO
MGI:2158734 (MGI:5550154|PMID:24385580)
RGD
PMID:24385580
MGI:5550154
NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947
G
Rab1a
RAB1A, member RAS oncogene family
NOT|involved_in
ISO
(PMID:23885123)
RGD
PMID:23885123
NCBI chr14:94,422,219...94,448,799
Ensembl chr14:94,415,275...94,448,248
G
Rab1b
RAB1B, member RAS oncogene family
NOT|involved_in
ISO
(PMID:23885123)
RGD
PMID:23885123
NCBI chr 1:202,405,759...202,413,850
Ensembl chr 1:202,405,759...202,413,868
G
Rap2b
RAP2B, member of RAS oncogene family
NOT|involved_in
ISO
(PMID:23885123)
RGD
PMID:23885123
NCBI chr 2:145,599,714...145,600,265
Ensembl chr 2:145,599,116...145,603,069
G
Rap2c
RAP2C, member of RAS oncogene family
involved_in
ISO
UniProtKB:Q9Y624 (PMID:23885123)
RGD
PMID:23885123
NCBI chr X:130,504,554...130,517,671
Ensembl chr X:130,504,698...130,518,328
G
Rapgef2
Rap guanine nucleotide exchange factor 2
involved_in
ISO
(PMID:23885123)
RGD
PMID:23885123
NCBI chr 2:164,207,513...164,322,157
Ensembl chr 2:164,207,513...164,244,247
G
Rapgef6
Rap guanine nucleotide exchange factor 6
NOT|involved_in
ISO
(PMID:23885123)
RGD
PMID:23885123
NCBI chr10:38,655,854...38,824,227
Ensembl chr10:38,655,867...38,823,211
G
Tjp1
tight junction protein 1
involved_in
ISO IBA
(PMID:23885123) PMID:21873635
RGD
PMID:23885123 PMID:21873635
RGD:13792537
NCBI chr 1:118,849,838...119,094,492
Ensembl chr 1:118,849,838...119,094,432
G
Tjp2
tight junction protein 2
involved_in
ISO IBA
(PMID:23885123) PMID:21873635
RGD
PMID:23885123 PMID:21873635
RGD:13792537
NCBI chr 1:221,709,745...221,838,383
Ensembl chr 1:221,709,745...221,838,295
G
Tjp3
tight junction protein 3
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 7:8,427,650...8,446,279
Ensembl chr 7:8,432,811...8,446,279
G
Acvr2b
activin A receptor type 2B
involved_in
ISO
(MGI:4436974|PMID:19903896)
RGD
PMID:19903896
MGI:4436974
NCBI chr 8:119,138,901...119,178,477
Ensembl chr 8:119,138,812...119,170,458
G
Acvrl1
activin A receptor like type 1
involved_in
ISO
(PMID:19903896) (MGI:4436974|PMID:19903896)
RGD
PMID:19903896
MGI:4436974
NCBI chr 7:132,239,200...132,256,592
Ensembl chr 7:132,239,729...132,256,591
G
Bmpr2
bone morphogenetic protein receptor type 2
involved_in
ISO
(MGI:4436974|PMID:19903896)
RGD
PMID:19903896
MGI:4436974
NCBI chr 9:61,192,718...61,307,280
Ensembl chr 9:61,190,566...61,301,809
G
Prox1
prospero homeobox 1
involved_in acts_upstream_of_or_within
ISO
(PMID:12198161) MGI:2182767|MGI:3609548 (MGI:3820329|PMID:19056883)
RGD
PMID:12198161 PMID:19056883
MGI:3820329
NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
G
Sox18
SRY-box transcription factor 18
acts_upstream_of_or_within
ISO
MGI:2178809 (MGI:3828192|PMID:18931657)
RGD
PMID:18931657
MGI:3828192
NCBI chr 3:168,785,488...168,787,290
Ensembl chr 3:168,785,490...168,787,290
G
Tie1
tyrosine kinase with immunoglobulin-like and EGF-like domains 1
acts_upstream_of_or_within
ISO
(MGI:4439415|PMID:20223757)
RGD
PMID:20223757
MGI:4439415
NCBI chr 5:132,000,013...132,019,658
Ensembl chr 5:132,000,015...132,019,592
G
Nr2f2
nuclear receptor subfamily 2, group F, member 2
involved_in
ISO
(PMID:18815287)
RGD
PMID:18815287
NCBI chr 1:124,008,282...124,022,521
Ensembl chr 1:124,009,181...124,022,031
G
Pdpn
podoplanin
involved_in
ISS ISO
GO_REF:0000024 (MGI:4453945|PMID:20110424)
UniProt RGD
PMID:20110424
GO_REF:0000024 MGI:4453945
NCBI chr 5:155,601,691...155,635,656
Ensembl chr 5:155,601,691...155,635,656
G
Prox1
prospero homeobox 1
involved_in
ISO
(PMID:18815287)
RGD
PMID:18815287
NCBI chr13:101,669,184...101,719,804
Ensembl chr13:101,669,184...101,711,183
G
Foxj2
forkhead box J2
involved_in
ISO
(PMID:24792364)
RGD
PMID:24792364
NCBI chr 4:156,047,043...156,073,540
Ensembl chr 4:156,046,969...156,073,518
G
Acvrl1
activin A receptor like type 1
involved_in
ISO
(MGI:4830635|PMID:20406889)
RGD
PMID:20406889
MGI:4830635
NCBI chr 7:132,239,200...132,256,592
Ensembl chr 7:132,239,729...132,256,591
G
Id1
inhibitor of DNA binding 1
IMP
RGD
PMID:20830586
RGD:9686141
NCBI chr 3:141,210,666...141,212,420
Ensembl chr 3:141,211,267...141,212,419
G
Jag1
jagged canonical Notch ligand 1
involved_in
IEA ISO
GO_REF:0000107 (MGI:5661129|PMID:25535084)
Ensembl RGD
PMID:25535084
GO_REF:0000107 MGI:5661129
NCBI chr 3:124,406,794...124,442,220
Ensembl chr 3:124,406,794...124,442,209
G
Mir1
microRNA 1
involved_in
ISO
(PMID:23939491)
RGD
PMID:23939491
NCBI chr18:1,887,537...1,887,623
G
Mir1b
microRNA 1b
involved_in
ISO
(PMID:23939491)
RGD
PMID:23939491
NCBI chr 3:167,487,117...167,487,201
Ensembl chr 3:167,487,117...167,487,201
G
Notch4
notch receptor 4
involved_in
ISO
(MGI:1934537|PMID:11344305)
RGD
PMID:11344305
MGI:1934537
NCBI chr20:4,160,362...4,184,466
Ensembl chr20:4,160,445...4,184,465
G
Tgfbr1
transforming growth factor, beta receptor 1
IMP
RGD
PMID:17450384
RGD:2302022
NCBI chr 5:61,653,773...61,710,777
Ensembl chr 5:61,653,233...61,710,777
G
Vhl
von Hippel-Lindau tumor suppressor
acts_upstream_of_or_within
ISO
MGI:2136645|MGI:3608931 (MGI:5618205|PMID:25186293)
RGD
PMID:25186293
MGI:5618205
NCBI chr 4:146,772,483...146,779,376
Ensembl chr 4:146,772,468...146,779,377
G
Xdh
xanthine dehydrogenase
involved_in
IEA ISO
GO_REF:0000107 (PMID:18386220)
Ensembl RGD
PMID:18386220
GO_REF:0000107
NCBI chr 6:21,530,463...21,592,172
Ensembl chr 6:21,530,113...21,592,268
G
Zeb1
zinc finger E-box binding homeobox 1
involved_in
ISO IEA
(PMID:23765923) GO_REF:0000107
RGD Ensembl
PMID:23765923
GO_REF:0000107
NCBI chr17:51,948,948...52,116,018
Ensembl chr17:51,948,948...52,115,214
G
S1pr3
sphingosine-1-phosphate receptor 3
involved_in
ISO
(PMID:24851274)
RGD
PMID:24851274
NCBI chr17:13,781,050...13,794,408
Ensembl chr17:13,781,050...13,794,505
G
Vegfa
vascular endothelial growth factor A
involved_in
ISO IEA
(PMID:20048167) GO_REF:0000107
RGD Ensembl
PMID:20048167
GO_REF:0000107
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
G
Dll1
delta like canonical Notch ligand 1
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:3847069|PMID:19144989) GO_REF:0000024
Ensembl RGD UniProt
PMID:19144989
GO_REF:0000024 GO_REF:0000107 MGI:3847069
NCBI chr 1:56,312,062...56,320,177
Ensembl chr 1:56,312,066...56,320,179
G
Mir34a
microRNA 34a
involved_in
ISO
(PMID:24792364)
RGD
PMID:24792364
NCBI chr 5:160,533,002...160,533,103
Ensembl chr 5:160,533,002...160,533,103
G
Acvrl1
activin A receptor like type 1
involved_in
ISO
(MGI:4830635|PMID:20406889)
RGD
PMID:20406889
MGI:4830635
NCBI chr 7:132,239,200...132,256,592
Ensembl chr 7:132,239,729...132,256,591
G
Atoh8
atonal bHLH transcription factor 8
involved_in
ISO
(PMID:24463812)
RGD
PMID:24463812
NCBI chr 4:104,259,992...104,292,168
Ensembl chr 4:104,259,992...104,292,168
G
Bmp4
bone morphogenetic protein 4
involved_in
IEA ISO
GO_REF:0000107 (MGI:4830635|PMID:20406889)
Ensembl RGD
PMID:20406889
GO_REF:0000107 MGI:4830635
NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306
G
Bmp6
bone morphogenetic protein 6
involved_in
ISO
(MGI:4830635|PMID:20406889)
RGD
PMID:20406889
MGI:4830635
NCBI chr17:26,318,121...26,469,034
Ensembl chr17:26,318,569...26,470,365
G
Btg1
BTG anti-proliferation factor 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:15033446)
UniProt RGD
PMID:15033446
GO_REF:0000024
NCBI chr 7:31,341,391...31,343,649
Ensembl chr 7:31,341,027...31,343,649
G
Ctnnb1
catenin beta 1
acts_upstream_of_or_within involved_in
ISO IEA
MGI:2148567 (MGI:3773938|PMID:18231602) GO_REF:0000107
RGD Ensembl
PMID:18231602
GO_REF:0000107 MGI:3773938
NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
G
Etv2
ETS variant transcription factor 2
acts_upstream_of_or_within
ISO
(MGI:4415813|PMID:18462699)
RGD
PMID:18462699
MGI:4415813
NCBI chr 1:85,890,562...85,894,025
Ensembl chr 1:85,890,559...85,893,431
G
Gdf2
growth differentiation factor 2
involved_in
ISO
(MGI:4830635|PMID:20406889)
RGD
PMID:20406889
MGI:4830635
NCBI chr16:9,255,430...9,261,429
Ensembl chr16:9,255,430...9,261,429
G
Mir150
microRNA 150
involved_in
ISO
(PMID:23765923)
RGD
PMID:23765923
NCBI chr 1:95,605,024...95,605,108
Ensembl chr 1:95,605,024...95,605,108
G
Mir181a2
microRNA 181a-2
involved_in
ISO
RNAcentral:URS0000241987_9606|RNAcentral:URS00003DA300_9606 (PMID:22232059)
RGD
PMID:22232059
NCBI chr 3:22,615,845...22,615,961
Ensembl chr 3:22,615,845...22,615,961
G
Mir181b1
microRNA 181b-1
involved_in
ISO
RNAcentral:URS0000229622_9606|RNAcentral:URS0000605E00_9606 (PMID:22232059)
RGD
PMID:22232059
NCBI chr13:49,485,688...49,485,797
Ensembl chr13:49,485,688...49,485,797
G
Mir181b2
microRNA 181b-2
involved_in
ISO
RNAcentral:URS0000229622_9606 (PMID:22232059)
RGD
PMID:22232059
NCBI chr 3:22,616,948...22,617,035
Ensembl chr 3:22,616,948...22,617,035
G
Mir200c
microRNA 200c
involved_in
ISO
(PMID:23765923)
RGD
PMID:23765923
NCBI chr 4:157,523,679...157,523,747
G
Mir21
microRNA 21
involved_in
ISO
(PMID:24356956)
RGD
PMID:24356956
NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348
G
Mir99b
microRNA 99b
involved_in
ISO
RNAcentral:URS00001C308D_9606|RNAcentral:URS00002C10B3_9606 (PMID:22232059)
RGD
PMID:22232059
NCBI chr 1:58,677,015...58,677,084
Ensembl chr 1:58,677,011...58,677,090
G
Notch1
notch receptor 1
IMP
RGD
PMID:19109527
RGD:2325303
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
G
Tmem100
transmembrane protein 100
involved_in
ISO
(MGI:5432418|PMID:22783020)
RGD
PMID:22783020
MGI:5432418
NCBI chr10:74,854,779...74,861,147
Ensembl chr10:74,854,468...74,862,941
G
Vezf1
vascular endothelial zinc finger 1
involved_in
ISO
(PMID:27538588)
RGD
PMID:27538588
NCBI chr10:72,859,669...72,876,111
Ensembl chr10:72,859,877...72,876,111
G
Add1
adducin 1
involved_in
ISO IEA IBA
(PMID:25978380) (MGI:5796260|PMID:25978380) GO_REF:0000107 PMID:21873635
RGD Ensembl
PMID:25978380 PMID:21873635
GO_REF:0000107 MGI:5796260 , RGD:13792537
NCBI chr14:76,108,643...76,167,267
Ensembl chr14:76,108,654...76,167,182
G
Akap11
A-kinase anchoring protein 11
IMP
RGD
PMID:25188285
RGD:14348953
NCBI chr15:53,911,635...53,956,138
Ensembl chr15:53,911,657...53,941,605
G
Cdc45
cell division cycle 45
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr11:82,185,427...82,210,630
Ensembl chr11:82,185,473...82,210,619
G
Cdh5
cadherin 5
involved_in
ISO
(PMID:23288152)
RGD
PMID:23288152
NCBI chr19:815,415...854,478
Ensembl chr19:815,411...854,368
G
Cldn5
claudin 5
involved_in
ISO
(PMID:23288152)
RGD
PMID:23288152
NCBI chr11:82,212,822...82,214,248
Ensembl chr11:82,211,475...82,214,992
G
Dicer1
dicer 1 ribonuclease III
IMP
RGD
PMID:23239824
RGD:149735901
NCBI chr 6:123,627,529...123,692,278
Ensembl chr 6:123,631,250...123,693,965
G
F11r
F11 receptor
involved_in
ISO
(PMID:26985018)
RGD
PMID:26985018
NCBI chr13:83,873,797...83,897,388
Ensembl chr13:83,873,797...83,897,402
G
Il4
interleukin 4
involved_in
ISO
(PMID:24280217)
RGD
PMID:24280217
NCBI chr10:37,771,203...37,776,750
Ensembl chr10:37,771,203...37,776,750
G
Proc
protein C, inactivator of coagulation factors Va and VIIIa
involved_in
ISO IEA ISS
(PMID:25651845) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:25651845
GO_REF:0000024 GO_REF:0000107
NCBI chr18:23,764,367...23,774,816
Ensembl chr18:23,764,368...23,775,133
G
S1pr2
sphingosine-1-phosphate receptor 2
involved_in
ISO
(PMID:24851274)
RGD
PMID:24851274
NCBI chr 8:19,503,276...19,514,169
Ensembl chr 8:19,502,627...19,523,574
G
Apold1
apolipoprotein L domain containing 1
involved_in
IEP IBA
PMID:21873635
RGD GO_Central
PMID:15102925 PMID:21873635
RGD:1303988 , RGD:13792537
NCBI chr 4:167,768,437...167,825,706
Ensembl chr 4:167,818,271...167,825,706
G
Bmpr1a
bone morphogenetic protein receptor type 1A
NOT|involved_in
ISO
(MGI:4830635|PMID:20406889)
RGD
PMID:20406889
MGI:4830635
NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616
G
Ceacam1
CEA cell adhesion molecule 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:3640069|PMID:16680193)
UniProt RGD
PMID:16680193
GO_REF:0000024 MGI:3640069
NCBI chr 1:81,043,595...81,060,050
Ensembl chr 1:81,043,595...81,059,992
G
Tgfb3
transforming growth factor, beta 3
TAS
RGD
PMID:12183510
RGD:727411
NCBI chr 6:105,704,058...105,726,661
Ensembl chr 6:105,704,236...105,726,564
G
Vegfa
vascular endothelial growth factor A
acts_upstream_of_or_within
ISO
(MGI:5543371|PMID:18772315)
RGD
PMID:18772315
MGI:5543371
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
G
Ikbkb
inhibitor of nuclear factor kappa B kinase subunit beta
involved_in
ISO IEA
(PMID:25816133) GO_REF:0000107
RGD Ensembl
PMID:25816133
GO_REF:0000107
NCBI chr16:69,319,487...69,373,251
Ensembl chr16:69,319,554...69,373,250
G
Il1b
interleukin 1 beta
involved_in
ISO
(PMID:25816133)
RGD
PMID:25816133
NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
G
Plcb1
phospholipase C beta 1
involved_in
IEA ISO
GO_REF:0000107 (MGI:5904576|PMID:27653213)
Ensembl RGD
PMID:27653213
GO_REF:0000107 MGI:5904576
NCBI chr 3:122,059,968...122,772,896
Ensembl chr 3:122,060,031...122,772,869
G
Ppp1r12a
protein phosphatase 1, regulatory subunit 12A
NOT|involved_in
ISO
(PMID:25816133)
RGD
PMID:25816133
NCBI chr 7:43,482,808...43,593,689
Ensembl chr 7:43,482,803...43,593,425
G
Rock1
Rho-associated coiled-coil containing protein kinase 1
involved_in
ISO IEA
UniProtKB:O75116 (PMID:25816133) GO_REF:0000107
RGD Ensembl
PMID:25816133
GO_REF:0000107
NCBI chr18:1,114,532...1,236,345
Ensembl chr18:1,115,905...1,235,571
G
Rock2
Rho-associated coiled-coil containing protein kinase 2
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:Q13464 (PMID:25816133)
Ensembl RGD
PMID:25816133
GO_REF:0000107
NCBI chr 6:39,679,116...39,774,033
Ensembl chr 6:39,679,082...39,774,031
G
Tnf
tumor necrosis factor
involved_in
ISO
(PMID:25816133)
RGD
PMID:25816133
NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
G
Tnfrsf1a
TNF receptor superfamily member 1A
involved_in
ISO
(PMID:25816133)
RGD
PMID:25816133
NCBI chr 4:158,150,815...158,163,592
Ensembl chr 4:158,150,820...158,163,591
G
Vcl
vinculin
involved_in
IEA ISO
GO_REF:0000107 (PMID:26923917)
Ensembl RGD
PMID:26923917
GO_REF:0000107
NCBI chr15:3,265,776...3,355,586
Ensembl chr15:3,265,815...3,355,606
G
Zdhhc21
zinc finger DHHC-type palmitoyltransferase 21
involved_in
ISO
(MGI:5904576|PMID:27653213)
RGD
PMID:27653213
MGI:5904576
NCBI chr 5:97,227,621...97,286,866
Ensembl chr 5:97,229,345...97,286,537
G
Notch1
notch receptor 1
involved_in
ISO
(MGI:4837019|PMID:20890042)
RGD
PMID:20890042
MGI:4837019
NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531
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