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ONTOLOGY REPORT - ANNOTATIONS


Term:farnesyl diphosphate biosynthetic process
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Accession:GO:0045337 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of farnesyl diphosphate.
Synonyms:exact_synonym: farnesyl diphosphate anabolism;   farnesyl diphosphate biosynthesis;   farnesyl diphosphate formation;   farnesyl diphosphate synthesis
 xref: MetaCyc:PWY-5123



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farnesyl diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fdps farnesyl diphosphate synthase involved_in IDA
IEA
IBA
GO_REF:0000041
PMID:21873635
UniProt
RGD
PMID:8188698 PMID:21873635 GO_REF:0000041, RGD:2316305, RGD:13792537 NCBI chr 2:174,497,402...174,507,031
Ensembl chr 2:174,486,665...174,507,776
JBrowse link
G Ggps1 geranylgeranyl diphosphate synthase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr17:51,263,262...51,282,471
Ensembl chr17:51,263,263...51,276,220
JBrowse link
farnesyl diphosphate biosynthetic process, mevalonate pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmgcs1 3-hydroxy-3-methylglutaryl-CoA synthase 1 involved_in IBA
IEA
PMID:21873635
GO_REF:0000002
InterPro PMID:21873635 GO_REF:0000002, RGD:13792537 NCBI chr 2:51,649,368...51,667,100
Ensembl chr 2:51,649,497...51,667,100
JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:185,875,609...185,903,505
Ensembl chr 2:185,875,616...185,902,130
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20091
    metabolic process 12359
      cellular metabolic process 10396
        cellular biosynthetic process 6140
          isoprenoid biosynthetic process 42
            terpenoid biosynthetic process 18
              farnesyl diphosphate biosynthetic process 4
                farnesyl diphosphate biosynthetic process, mevalonate pathway 2
Path 2
Term Annotations click to browse term
  biological_process 20091
    metabolic process 12359
      primary metabolic process 11118
        lipid metabolic process 1454
          cellular lipid metabolic process 1062
            isoprenoid metabolic process 126
              terpenoid metabolic process 97
                terpenoid biosynthetic process 18
                  farnesyl diphosphate biosynthetic process 4
                    farnesyl diphosphate biosynthetic process, mevalonate pathway 2
paths to the root