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ONTOLOGY REPORT - ANNOTATIONS

Term:phagocytic vesicle
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Accession:GO:0045335 term browser browse the term
Definition:A membrane-bounded intracellular vesicle that arises from the ingestion of particulate material by phagocytosis.
Synonyms:exact_synonym: phagosome
 xref: Wikipedia:Phagosome
 never_in_taxon: NCBITaxon:4751 ! Fungi


show annotations for term's descendants           Sort by:
phagocytic vesicle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA1 ATP binding cassette subfamily A member 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:246,144,277...246,278,492
Ensembl chr 1:246,144,277...246,278,492 		JBrowse link
G ACTG1 actin gamma 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr12:1,320,355...1,323,219
Ensembl chr12:1,313,641...1,323,217 		JBrowse link
G AMBRA1 autophagy and beclin 1 regulator 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:15,935,354...16,119,082
Ensembl chr 2:15,935,375...16,119,079 		JBrowse link
G ANXA11 annexin A11 located_in IEA Ensembl GO_REF:0000107 NCBI chr14:81,835,205...81,879,565
Ensembl chr14:81,835,194...81,879,372 		JBrowse link
G APPL1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 located_in IEA UniProt GO_REF:0000044 NCBI chr13:39,089,157...39,124,969
Ensembl chr13:39,089,077...39,129,781 		JBrowse link
G APPL2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 located_in IEA UniProt GO_REF:0000044 NCBI chr 5:79,356,046...79,412,235
Ensembl chr 5:79,356,067...79,412,235 		JBrowse link
G ATG14 autophagy related 14 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:184,701,020...184,743,752
Ensembl chr 1:184,686,142...184,743,706 		JBrowse link
G ATP6V1A ATPase H+ transporting V1 subunit A located_in IEA TreeGrafter GO_REF:0000118 NCBI chr13:146,128,664...146,165,269
Ensembl chr13:146,121,759...146,192,442 		JBrowse link
G BECN1 beclin 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr12:20,041,914...20,054,249
Ensembl chr12:20,041,956...20,054,373 		JBrowse link
G CAPG capping actin protein, gelsolin like located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chr 3:59,335,483...59,366,855
Ensembl chr 3:59,339,966...59,366,846 		JBrowse link
G CDC42 cell division cycle 42 located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:80,035,034...80,089,243
Ensembl chr 6:80,035,123...80,089,233 		JBrowse link
G CDC42EP2 CDC42 effector protein 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:6,897,497...6,904,040
Ensembl chr 2:6,895,847...6,904,040 		JBrowse link
G CDC42EP4 CDC42 effector protein 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr12:7,637,797...7,660,189
Ensembl chr12:7,638,085...7,660,186 		JBrowse link
G CLCN3 chloride voltage-gated channel 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr14:20,037,628...20,127,160
Ensembl chr14:20,026,685...20,127,155 		JBrowse link
G CORO1A coronin 1A located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:18,336,813...18,342,381
Ensembl chr 3:18,336,898...18,342,396 		JBrowse link
G CTSS cathepsin S located_in IEA Ensembl
UniProt		 GO_REF:0000044 GO_REF:0000107 NCBI chr 4:98,415,273...98,442,952
Ensembl chr 4:98,417,883...98,442,950 		JBrowse link
G DNAJC27 DnaJ heat shock protein family (Hsp40) member C27 located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 3:113,816,718...113,857,117
Ensembl chr 3:113,816,772...113,857,113 		JBrowse link
G EVL Enah/Vasp-like located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chr 7:120,911,814...121,056,556
Ensembl chr 7:120,911,648...121,056,555 		JBrowse link
G FLNB filamin B located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chr13:39,789,259...39,938,751
Ensembl chr13:39,789,739...39,938,746 		JBrowse link
G FMNL1 formin like 1 located_in ISO (MGI:5426775|PMID:21148482) UniProt PMID:21148482 MGI:5426775 NCBI chr12:18,198,764...18,225,621
Ensembl chr12:18,198,769...18,225,365 		JBrowse link
G GP91-PHOX NADPH oxidase heavy chain subunit located_in ISO (MGI:5468041|PMID:23303671) ParkinsonsUK-UCL PMID:23303671 MGI:5468041 NCBI chr  X:33,654,656...33,678,346
Ensembl chr  X:33,643,648...33,680,580 		JBrowse link
G GSN gelsolin located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:261,295,711...261,372,848
Ensembl chr 1:261,307,008...261,372,848 		JBrowse link
G HAVCR1 hepatitis A virus cellular receptor 1 ISO RGD PMID:18414680 RGD:2316597 NCBI chr16:66,162,318...66,208,868 JBrowse link
G KIF16B kinesin family member 16B located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chr17:24,882,139...25,188,990
Ensembl chr17:24,882,142...25,186,703 		JBrowse link
G KIF5B kinesin family member 5B located_in IEA Ensembl GO_REF:0000107 NCBI chr10:42,637,105...42,693,551
Ensembl chr10:42,637,109...42,693,491 		JBrowse link
G LAMP1 lysosomal associated membrane protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr11:78,600,818...78,617,587
Ensembl chr11:78,600,713...78,617,615 		JBrowse link
G LOC110259471 macrophage-expressed gene 1 protein-like located_in ISO (MGI:6208630|PMID:26402460) UniProt PMID:26402460 MGI:6208630 NCBI chr 2:12,472,927...12,475,116 JBrowse link
G MTOR mechanistic target of rapamycin kinase located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:71,286,989...71,412,913
Ensembl chr 6:71,286,989...71,412,888 		JBrowse link
G MYH9 myosin heavy chain 9 located_in ISO RGD PMID:19117932 RGD:6902913 NCBI chr 5:11,365,603...11,456,475
Ensembl chr 5:11,360,660...11,456,472 		JBrowse link
G MYO1C myosin IC located_in IEA Ensembl GO_REF:0000107 NCBI chr12:47,691,252...47,715,670
Ensembl chr12:47,691,256...47,718,337 		JBrowse link
G NOD1 nucleotide binding oligomerization domain containing 1 located_in ISO (MGI:6414746|PMID:31649195) UniProt PMID:31649195 MGI:6414746 NCBI chr18:42,464,667...42,509,135
Ensembl chr18:42,432,050...42,512,264 		JBrowse link
G NOD2 nucleotide binding oligomerization domain containing 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:34,132,127...34,167,446
Ensembl chr 6:34,130,938...34,177,534 		JBrowse link
G PIK3C3 phosphatidylinositol 3-kinase catalytic subunit type 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:125,890,598...126,038,753
Ensembl chr 6:125,890,712...126,043,157 		JBrowse link
G PLD4 phospholipase D family member 4 located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118
G PRPF38B pre-mRNA processing factor 38B located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:111,338,988...111,347,505
Ensembl chr 4:111,233,281...111,347,501 		JBrowse link
G PRPS2 phosphoribosyl pyrophosphate synthetase 2 located_in IEA UniProt GO_REF:0000044 NCBI chr  X:9,505,034...9,531,044
Ensembl chr  X:9,503,953...9,530,086 		JBrowse link
G RAB11A RAB11A, member RAS oncogene family located_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000044 GO_REF:0000107 NCBI chr 1:163,858,254...163,887,741
Ensembl chr 1:163,858,123...163,891,527 		JBrowse link
G RAB11B RAB11B, member RAS oncogene family located_in ISO (PMID:21255211) UniProt PMID:21255211 NCBI chr 2:70,884,457...70,896,169
Ensembl chr 2:70,884,462...70,896,172 		JBrowse link
G RAB11FIP5 RAB11 family interacting protein 5 located_in
is_active_in		 IEA
IBA		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:69,656,660...69,699,542
Ensembl chr 3:69,657,696...69,699,541 		JBrowse link
G RAB12 RAB12, member RAS oncogene family located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chr 6:99,216,225...99,244,627
Ensembl chr 6:99,216,228...99,244,868 		JBrowse link
G RAB14 RAB14, member RAS oncogene family located_in
is_active_in		 ISS
IBA
IEA		 UniProt
GO_Central
Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000044 GO_REF:0000107 NCBI chr 1:261,228,112...261,256,913
Ensembl chr 1:261,229,535...261,256,791 		JBrowse link
G RAB20 RAB20, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chr11:77,167,052...77,188,893
Ensembl chr11:77,167,059...77,188,898 		JBrowse link
G RAB22A RAB22A, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chr17:58,514,985...58,572,421
Ensembl chr17:58,514,985...58,572,421 		JBrowse link
G RAB23 RAB23, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chr 7:28,632,065...28,658,958
Ensembl chr 7:28,632,082...28,658,952 		JBrowse link
G RAB29 RAB29, member RAS oncogene family located_in IEA TreeGrafter GO_REF:0000118 NCBI chr 9:66,448,854...66,458,766
Ensembl chr 9:66,448,953...66,458,724 		JBrowse link
G RAB31 RAB31, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:98,278,644...98,385,857
Ensembl chr 6:98,278,647...98,385,795 		JBrowse link
G RAB32 RAB32, member RAS oncogene family located_in ISS
IEA		 UniProt
TreeGrafter
Ensembl		 GO_REF:0000024 GO_REF:0000044 GO_REF:0000107 GO_REF:0000118 NCBI chr 1:19,076,301...19,097,647
Ensembl chr 1:19,075,271...19,097,870 		JBrowse link
G RAB34 RAB34, member RAS oncogene family located_in
is_active_in		 IEA
IBA
ISS		 Ensembl
GO_Central
TreeGrafter
UniProt		 GO_REF:0000024 GO_REF:0000033 GO_REF:0000044 GO_REF:0000107 GO_REF:0000118 NCBI chr12:44,951,989...44,956,458
Ensembl chr12:44,951,210...44,956,119 		JBrowse link
G RAB38 RAB38, member RAS oncogene family located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:21,577,083...21,640,637
Ensembl chr 9:21,577,033...21,640,115 		JBrowse link
G RAB39A RAB39A, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:36,341,339...36,403,690
Ensembl chr 9:36,341,339...36,403,654 		JBrowse link
G RAB43 RAB43, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chr13:71,564,250...71,596,318
Ensembl chr13:71,562,350...71,596,249 		JBrowse link
G RAB5A RAB5A, member RAS oncogene family located_in IEA
ISS		 Ensembl
UniProt		 GO_REF:0000024 GO_REF:0000107 NCBI chr13:6,905,302...6,940,165
Ensembl chr13:6,905,390...6,941,423 		JBrowse link
G RAB7A RAB7A, member RAS oncogene family located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr13:71,777,422...71,886,758
Ensembl chr13:71,777,424...71,852,694 		JBrowse link
G RAB7B RAB7B, member RAS oncogene family located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr 9:66,635,636...66,666,034
Ensembl chr 9:66,635,638...66,666,036 		JBrowse link
G RAB8A RAB8A, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:61,430,680...61,450,351
Ensembl chr 2:61,429,523...61,450,413 		JBrowse link
G RAB8B RAB8B, member RAS oncogene family located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:108,772,851...108,840,222
Ensembl chr 1:108,772,851...108,840,227 		JBrowse link
G RAB9A RAB9A, member RAS oncogene family located_in
is_active_in		 IEA
IBA		 Ensembl
TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:10,328,085...10,349,399
Ensembl chr  X:10,293,757...10,349,387 		JBrowse link
G RAB9B RAB9B, member RAS oncogene family located_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chr  X:84,721,269...84,733,000
Ensembl chr  X:84,721,274...84,732,990 		JBrowse link
G RAP1A RAP1A, member of RAS oncogene family ISO RGD PMID:18832707 RGD:9835043 NCBI chr 4:108,675,537...108,750,952
Ensembl chr 4:108,676,685...108,743,368 		JBrowse link
G SCIMP SLP adaptor and CSK interacting membrane protein located_in IEA Ensembl GO_REF:0000107 NCBI chr12:51,772,635...51,794,107
Ensembl chr12:51,773,448...51,794,104 		JBrowse link
G SLAMF1 signaling lymphocytic activation molecule family member 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:89,870,359...89,907,114
Ensembl chr 4:89,870,539...89,908,231 		JBrowse link
G SNX3 sorting nexin 3 located_in IEA UniProt GO_REF:0000044 NCBI chr 1:74,306,450...74,349,735
Ensembl chr 1:74,306,455...74,349,335 		JBrowse link
G SRGAP2 SLIT-ROBO Rho GTPase activating protein 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:66,838,062...67,117,315
Ensembl chr 9:66,838,123...67,117,315 		JBrowse link
G STX11 syntaxin 11 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chr 1:21,127,871...21,170,321
Ensembl chr 1:21,127,564...21,159,694 		JBrowse link
G STX12 syntaxin 12 located_in IEA Ensembl GO_REF:0000107 NCBI chr 6:84,918,827...84,960,235
Ensembl chr 6:84,918,678...84,960,720 		JBrowse link
G STX4 syntaxin 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr 3:17,422,266...17,431,377
Ensembl chr 3:17,416,842...17,431,053 		JBrowse link
G STX6 syntaxin 6 located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:122,533,737...122,580,631
Ensembl chr 9:122,529,727...122,580,608 		JBrowse link
G STX8 syntaxin 8 located_in IEA Ensembl GO_REF:0000107 NCBI chr12:54,296,988...54,544,668
Ensembl chr12:54,296,995...54,544,646 		JBrowse link
G STXBP1 syntaxin binding protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:268,116,124...268,205,805
Ensembl chr 1:268,116,120...268,205,778 		JBrowse link
G STXBP2 syntaxin binding protein 2 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chr 2:71,504,575...71,513,446
Ensembl chr 2:71,504,569...71,513,422 		JBrowse link
G STXBP3 syntaxin binding protein 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:111,234,154...111,294,067
Ensembl chr 4:111,233,991...111,293,964 		JBrowse link
G STXBP4 syntaxin binding protein 4 located_in IEA Ensembl GO_REF:0000107 NCBI chr12:31,277,116...31,478,828
Ensembl chr12:31,277,487...31,472,792 		JBrowse link
G SYT11 synaptotagmin 11 located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:94,139,345...94,163,091
Ensembl chr 4:94,139,347...94,163,049 		JBrowse link
G TCIRG1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:4,844,627...4,860,562
Ensembl chr 2:4,844,637...4,860,498 		JBrowse link
G TLR7 toll like receptor 7 located_in IEA UniProt GO_REF:0000044 NCBI chr  X:9,573,178...9,576,987 JBrowse link
G TLR9 toll like receptor 9 located_in IEA UniProt GO_REF:0000044 NCBI chr13:34,353,444...34,370,990
Ensembl chr13:34,349,609...34,357,673 		JBrowse link
G UVRAG UV radiation resistance associated located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:10,088,779...10,370,857
Ensembl chr 9:10,088,798...10,370,855 		JBrowse link
G VAMP3 vesicle associated membrane protein 3 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chr 6:68,473,921...68,482,438 JBrowse link
G VAMP4 vesicle associated membrane protein 4 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chr 9:114,138,350...114,174,996
Ensembl chr 9:114,138,330...114,174,979 		JBrowse link
G VAMP7 vesicle associated membrane protein 7 located_in ISO (MGI:3799611|PMID:15470500) UniProt PMID:15470500 MGI:3799611 NCBI chr  X:125,863,266...125,917,232
Ensembl chr  X:125,863,292...125,917,225 		JBrowse link
G VAMP8 vesicle associated membrane protein 8 located_in ISO (PMID:19144319) MGI PMID:19144319 NCBI chr 3:59,187,900...59,193,165
Ensembl chr 3:59,185,735...59,193,128 		JBrowse link
G VIM vimentin located_in IEA Ensembl GO_REF:0000107 NCBI chr10:43,516,441...43,526,172
Ensembl chr10:43,517,307...43,526,170 		JBrowse link
G VPS26B VPS26, retromer complex component B located_in IEA Ensembl GO_REF:0000107 NCBI chr 9:60,786,192...60,802,507
Ensembl chr 9:60,785,998...60,805,193 		JBrowse link
G WAS WASP actin nucleation promoting factor located_in IEA Ensembl GO_REF:0000107 NCBI chr  X:42,774,597...42,793,055
Ensembl chr  X:42,774,588...42,793,055 		JBrowse link
G ZDHHC5 zinc finger DHHC-type palmitoyltransferase 5 located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:13,250,967...13,276,517
Ensembl chr 2:13,250,970...13,276,114 		JBrowse link
G ZYX zyxin located_in IEA Ensembl GO_REF:0000107 NCBI chr18:6,861,072...6,870,256
Ensembl chr18:6,861,077...6,870,265 		JBrowse link
early phagosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APPL1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr13:39,089,157...39,124,969
Ensembl chr13:39,089,077...39,129,781 		JBrowse link
G APPL2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 located_in ISO (MGI:6271154|PMID:25568335) UniProt PMID:25568335 MGI:6271154 NCBI chr 5:79,356,046...79,412,235
Ensembl chr 5:79,356,067...79,412,235 		JBrowse link
G PLA2G5 phospholipase A2 group V located_in ISO (MGI:3639848|PMID:16407308) UniProt PMID:16407308 MGI:3639848 NCBI chr 6:78,365,697...78,376,383
Ensembl chr 6:78,302,062...78,376,220 		JBrowse link
G PRPS2 phosphoribosyl pyrophosphate synthetase 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr  X:9,505,034...9,531,044
Ensembl chr  X:9,503,953...9,530,086 		JBrowse link
G RAB5A RAB5A, member RAS oncogene family located_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr13:6,905,302...6,940,165
Ensembl chr13:6,905,390...6,941,423 		JBrowse link
G SLC9A9 solute carrier family 9 member A9 located_in IEA Ensembl GO_REF:0000107 NCBI chr13:83,962,613...84,636,878
Ensembl chr13:83,962,618...84,502,327 		JBrowse link
G SNX3 sorting nexin 3 located_in IEA Ensembl GO_REF:0000107 NCBI chr 1:74,306,450...74,349,735
Ensembl chr 1:74,306,455...74,349,335 		JBrowse link
G SYK spleen associated tyrosine kinase located_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr14:2,103,706...2,160,886
Ensembl chr14:2,056,670...2,161,171 		JBrowse link
G SYT11 synaptotagmin 11 located_in IEA Ensembl GO_REF:0000107 NCBI chr 4:94,139,345...94,163,091
Ensembl chr 4:94,139,347...94,163,049 		JBrowse link
G SYT7 synaptotagmin 7 located_in ISO (MGI:3690533|PMID:16982801) UniProt PMID:16982801 MGI:3690533 NCBI chr 2:9,947,962...10,012,713
Ensembl chr 2:9,947,925...10,012,496 		JBrowse link
G TLR7 toll like receptor 7 located_in ISO (MGI:3776596|PMID:18305481) UniProt PMID:18305481 MGI:3776596 NCBI chr  X:9,573,178...9,576,987 JBrowse link
G TLR9 toll like receptor 9 located_in ISS UniProt GO_REF:0000024 NCBI chr13:34,353,444...34,370,990
Ensembl chr13:34,349,609...34,357,673 		JBrowse link
G UNC13B unc-13 homolog B located_in ISO (MGI:5467668|PMID:23197834) ParkinsonsUK-UCL PMID:23197834 MGI:5467668 NCBI chr 1:235,918,751...236,158,098
Ensembl chr 1:235,918,747...236,158,098 		JBrowse link
G UNC93B1 unc-93 homolog B1, TLR signaling regulator located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:4,898,414...4,909,833
Ensembl chr 2:4,898,409...4,909,856 		JBrowse link
early phagosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APPL2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 located_in ISO (MGI:6270783|PMID:27219021) UniProt PMID:27219021 MGI:6270783 NCBI chr 5:79,356,046...79,412,235
Ensembl chr 5:79,356,067...79,412,235 		JBrowse link
G RAB31 RAB31, member RAS oncogene family located_in ISO (MGI:6271154|PMID:25568335) UniProt PMID:25568335 MGI:6271154 NCBI chr 6:98,278,644...98,385,857
Ensembl chr 6:98,278,647...98,385,795 		JBrowse link
phagocytic vesicle membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANXA3 annexin A3 located_in ISO (PMID:7526843) UniProt PMID:7526843 NCBI chr 8:73,970,314...73,993,039 JBrowse link
G CLEC4E C-type lectin domain family 4 member E is_active_in ISO (MGI:3796003|PMID:18490740) UniProt PMID:18490740 MGI:3796003 NCBI chr 5:63,219,229...63,228,566 JBrowse link
G CORO1A coronin 1A located_in IEA UniProt GO_REF:0000044 NCBI chr 3:18,336,813...18,342,381
Ensembl chr 3:18,336,898...18,342,396 		JBrowse link
G DMBT1 deleted in malignant brain tumors 1 located_in ISO (PMID:10485905) UniProt PMID:10485905 NCBI chr14:132,154,346...132,231,274 JBrowse link
G HVCN1 hydrogen voltage gated channel 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr14:32,006,837...32,044,165
Ensembl chr14:31,989,170...32,043,744 		JBrowse link
G INPP5B inositol polyphosphate-5-phosphatase B located_in IEA UniProt GO_REF:0000044 NCBI chr 6:93,885,471...93,944,398
Ensembl chr 6:93,885,465...93,944,342 		JBrowse link
G LAMP2 lysosomal associated membrane protein 2 located_in IEA Ensembl GO_REF:0000107 NCBI chr  X:98,586,718...98,623,939
Ensembl chr  X:98,556,710...98,623,940 		JBrowse link
G LOC100513601 patr class I histocompatibility antigen, A-126 alpha chain-like located_in IEA UniProt GO_REF:0000117 NCBI chr 7:22,888,616...22,920,154 JBrowse link
G LOC100622689 patr class I histocompatibility antigen, A-126 alpha chain-like located_in IEA UniProt GO_REF:0000117
G LOC110259471 macrophage-expressed gene 1 protein-like is_active_in ISO (PMID:37347855) UniProt PMID:37347855 NCBI chr 2:12,472,927...12,475,116 JBrowse link
G MPEG1 macrophage expressed 1 located_in IEA UniProt GO_REF:0000044 NCBI chr 2:12,194,303...12,196,594
Ensembl chr 2:12,194,327...12,198,351 		JBrowse link
G OCRL OCRL inositol polyphosphate-5-phosphatase located_in IEA UniProt GO_REF:0000044 NCBI chr  X:106,124,991...106,188,066
Ensembl chr  X:106,135,431...106,190,110 		JBrowse link
G PIKFYVE phosphoinositide kinase, FYVE-type zinc finger containing located_in IEA Ensembl GO_REF:0000107 NCBI chr15:111,372,148...111,468,720
Ensembl chr15:111,372,173...111,467,899 		JBrowse link
G PIP4P1 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central
TreeGrafter
UniProt		 GO_REF:0000033 GO_REF:0000044 GO_REF:0000107 GO_REF:0000118 NCBI chr 7:78,447,323...78,451,761
Ensembl chr 7:78,447,369...78,451,846 		JBrowse link
G PIP4P2 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central
TreeGrafter
UniProt		 GO_REF:0000033 GO_REF:0000044 GO_REF:0000107 GO_REF:0000118 NCBI chr 4:45,825,415...45,891,192
Ensembl chr 4:45,826,326...45,892,417 		JBrowse link
G RAB10 RAB10, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chr 3:112,842,190...112,924,188
Ensembl chr 3:112,829,137...112,924,269 		JBrowse link
G RAB17 RAB17, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chr15:137,232,781...137,255,884
Ensembl chr15:137,235,936...137,261,057 		JBrowse link
G RAB22A RAB22A, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chr17:58,514,985...58,572,421
Ensembl chr17:58,514,985...58,572,421 		JBrowse link
G RAB31 RAB31, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chr 6:98,278,644...98,385,857
Ensembl chr 6:98,278,647...98,385,795 		JBrowse link
G RAB32 RAB32, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chr 1:19,076,301...19,097,647
Ensembl chr 1:19,075,271...19,097,870 		JBrowse link
G RAB34 RAB34, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chr12:44,951,989...44,956,458
Ensembl chr12:44,951,210...44,956,119 		JBrowse link
G RAB43 RAB43, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chr13:71,564,250...71,596,318
Ensembl chr13:71,562,350...71,596,249 		JBrowse link
G RAB5A RAB5A, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chr13:6,905,302...6,940,165
Ensembl chr13:6,905,390...6,941,423 		JBrowse link
G RAB7A RAB7A, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chr13:71,777,422...71,886,758
Ensembl chr13:71,777,424...71,852,694 		JBrowse link
G RAB8A RAB8A, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chr 2:61,430,680...61,450,351
Ensembl chr 2:61,429,523...61,450,413 		JBrowse link
G RAB8B RAB8B, member RAS oncogene family located_in IEA UniProt GO_REF:0000044 NCBI chr 1:108,772,851...108,840,222
Ensembl chr 1:108,772,851...108,840,227 		JBrowse link
G RAPGEF1 Rap guanine nucleotide exchange factor 1 ISO RGD PMID:18832707 RGD:9835043 NCBI chr 1:271,494,243...271,624,609
Ensembl chr 1:271,494,248...271,600,920 		JBrowse link
G SLA Src like adaptor located_in IEA UniProt GO_REF:0000117 NCBI chr 4:8,166,829...8,247,396
Ensembl chr 4:8,189,232...8,247,388 		JBrowse link
G SLA-1 MHC class I antigen 1 located_in IEA UniProt GO_REF:0000117 NCBI chr 7:22,824,137...22,920,154 JBrowse link
G SLA-11 MHC class I antigen 11 located_in IEA UniProt GO_REF:0000117 NCBI chr 7:23,005,436...23,010,790 JBrowse link
G SLA-2 MHC class I antigen 2 located_in IEA UniProt GO_REF:0000117 NCBI chr 7:22,916,747...22,959,405 JBrowse link
G SLA-3 MHC class I antigen 3 located_in IEA UniProt GO_REF:0000117 NCBI chr 7:22,938,211...22,942,735 JBrowse link
G SLA-5 MHC class I antigen 5 located_in IEA UniProt GO_REF:0000117 NCBI chr 7:22,851,888...22,854,782 JBrowse link
G SLA-6 MHC class I antigen 6 located_in IEA UniProt GO_REF:0000117 NCBI chr 7:23,645,335...23,649,342 JBrowse link
G SLA-7 MHC class I antigen 7 located_in IEA UniProt GO_REF:0000117 NCBI chr 7:23,634,731...23,638,722 JBrowse link
G SLA-8 MHC class I antigen 8 located_in IEA UniProt GO_REF:0000117 NCBI chr 7:23,622,352...23,625,818 JBrowse link
G SLA-9 MHC class I antigen 9 located_in IEA UniProt GO_REF:0000117
G SLA2 Src like adaptor 2 located_in IEA UniProt GO_REF:0000117 NCBI chr17:39,875,625...39,904,838
Ensembl chr17:39,875,628...39,902,940 		JBrowse link
G SLC11A1 solute carrier family 11 member 1 located_in
is_active_in		 IEA
IBA		 Ensembl
GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr15:120,434,100...120,446,396
Ensembl chr15:120,433,952...120,446,396 		JBrowse link
G SLC15A2 solute carrier family 15 member 2 located_in
is_active_in		 IEA
ISO		 (PMID:20406817) Ensembl
UniProt
UniProt		 PMID:20406817 GO_REF:0000044 GO_REF:0000107 NCBI chr13:138,595,942...138,634,473
Ensembl chr13:138,595,958...138,632,675 		JBrowse link
G SLC48A1 solute carrier family 48 member 1 located_in IEA UniProt GO_REF:0000044 NCBI chr 5:78,141,220...78,150,584
Ensembl chr 5:78,141,236...78,150,583 		JBrowse link
G SLC9A9 solute carrier family 9 member A9 located_in IEA Ensembl GO_REF:0000107 NCBI chr13:83,962,613...84,636,878
Ensembl chr13:83,962,618...84,502,327 		JBrowse link
G TCIRG1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 located_in IEA Ensembl GO_REF:0000107 NCBI chr 2:4,844,627...4,860,562
Ensembl chr 2:4,844,637...4,860,498 		JBrowse link
G TLR2 toll like receptor 2 located_in IEA UniProt GO_REF:0000044 NCBI chr 8:75,416,257...75,428,370
Ensembl chr 8:75,411,993...75,428,330 		JBrowse link
G VAMP7 vesicle associated membrane protein 7 located_in IEA UniProt GO_REF:0000044 NCBI chr  X:125,863,266...125,917,232
Ensembl chr  X:125,863,292...125,917,225 		JBrowse link
phagolysosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAM8 ADAM metallopeptidase domain 8 located_in IEA Ensembl GO_REF:0000107 NCBI chr14:141,221,177...141,233,728
Ensembl chr14:141,221,198...141,232,306 		JBrowse link
G PLA2G5 phospholipase A2 group V located_in ISO (MGI:3639848|PMID:16407308) UniProt PMID:16407308 MGI:3639848 NCBI chr 6:78,365,697...78,376,383
Ensembl chr 6:78,302,062...78,376,220 		JBrowse link
phagolysosome membrane term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LAMP1 lysosomal associated membrane protein 1 located_in IEA Ensembl GO_REF:0000107 NCBI chr11:78,600,818...78,617,587
Ensembl chr11:78,600,713...78,617,615 		JBrowse link
G MPEG1 macrophage expressed 1 located_in
is_active_in		 IEA
ISO		 (PMID:31537793) Ensembl
UniProt		 PMID:31537793 GO_REF:0000107 NCBI chr 2:12,194,303...12,196,594
Ensembl chr 2:12,194,327...12,198,351 		JBrowse link
G SLC48A1 solute carrier family 48 member 1 located_in
is_active_in		 IEA
ISO		 (PMID:23395172) Ensembl
MGI		 PMID:23395172 GO_REF:0000107 NCBI chr 5:78,141,220...78,150,584
Ensembl chr 5:78,141,236...78,150,583 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 18700
    cellular anatomical entity 18479
      cytoplasm 10635
        cytoplasmic vesicle 1893
          endocytic vesicle 219
            phagocytic vesicle 124
              clathrin-coated phagocytic vesicle + 0
              early phagosome + 15
              pexophagosome 0
              phagocytic vesicle lumen + 0
              phagocytic vesicle membrane + 47
              phagolysosome + 5
Path 2
Term Annotations click to browse term
  cellular_component 18700
    cellular anatomical entity 18479
      organelle 12432
        membrane-bounded organelle 11419
          vesicle 2127
            intracellular vesicle 1902
              cytoplasmic vesicle 1893
                endocytic vesicle 219
                  phagocytic vesicle 124
                    clathrin-coated phagocytic vesicle + 0
                    early phagosome + 15
                    pexophagosome 0
                    phagocytic vesicle lumen + 0
                    phagocytic vesicle membrane + 47
                    phagolysosome + 5
paths to the root