Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:cellular respiration
go back to main search page
Accession:GO:0045333 term browser browse the term
Definition:The enzymatic release of energy from inorganic and organic compounds (especially carbohydrates and fats) which either requires oxygen (aerobic respiration) or does not (anaerobic respiration).
Synonyms:exact_synonym: oxidative metabolic process;   oxidative metabolism
 broad_synonym: respiration
 xref: Wikipedia:Cellular_respiration


show annotations for term's descendants           Sort by:
 
cellular respiration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2 associated X, apoptosis regulator ISO RGD PMID:12460673 RGD:628373 NCBI chrNW_004936664:2,968,103...2,973,652 JBrowse link
G LOC101967907 protoheme IX farnesyltransferase, mitochondrial involved_in ISO (PMID:10767350) HGNC-UCL PMID:10767350 NCBI chrNW_004936724:783,591...905,625 JBrowse link
G LOC101969421 cytochrome P450 1A2 acts_upstream_of_or_within ISO (MGI:73448|PMID:7761462) MGI PMID:7761462 MGI:73448 NCBI chrNW_004936471:33,704,616...33,709,455 JBrowse link
G Lyrm7 LYR motif containing 7 involved_in ISO (PMID:23168492) UniProt PMID:23168492 NCBI chrNW_004936647:3,812,284...3,837,754 JBrowse link
G Mtln mitoregulin involved_in ISO (MGI:6393021|PMID:31296841) UniProt PMID:31296841 MGI:6393021 NCBI chrNW_004943304:685...1,449 JBrowse link
G Ndufs1 NADH:ubiquinone oxidoreductase core subunit S1 involved_in ISO (PMID:15186778), (PMID:16478720) UniProt PMID:15186778 PMID:16478720 NCBI chrNW_004936631:2,503,353...2,538,957 JBrowse link
G Ndufs4 NADH:ubiquinone oxidoreductase subunit S4 involved_in ISO (PMID:16478720) UniProt PMID:16478720 NCBI chrNW_004936480:13,829,093...13,932,202 JBrowse link
G Nfatc3 nuclear factor of activated T cells 3 acts_upstream_of_or_within ISO (MGI:2665260|PMID:12750314) MGI PMID:12750314 MGI:2665260 NCBI chrNW_004936475:18,462,424...18,557,832 JBrowse link
G Nfatc4 nuclear factor of activated T cells 4 acts_upstream_of_or_within ISO (MGI:2665260|PMID:12750314) MGI PMID:12750314 MGI:2665260 NCBI chrNW_004936722:178,866...187,847 JBrowse link
G Nr4a3 nuclear receptor subfamily 4 group A member 3 involved_in ISO (MGI:5645208|PMID:18325999) UniProt PMID:18325999 MGI:5645208 NCBI chrNW_004936524:8,252,321...8,290,747 JBrowse link
G Sdhaf4 succinate dehydrogenase complex assembly factor 4 involved_in ISO (PMID:24954416)
(MGI:5605436|PMID:24954416)
UniProt PMID:24954416 MGI:5605436 NCBI chrNW_004936618:2,451,717...2,461,676 JBrowse link
G Slc25a13 solute carrier family 25 member 13 involved_in ISO (PMID:12851387) UniProt PMID:12851387 NCBI chrNW_004936585:4,061,297...4,215,912 JBrowse link
G Slc25a25 solute carrier family 25 member 25 acts_upstream_of_or_within ISO (MGI:4947900|PMID:21296886) MGI PMID:21296886 MGI:4947900 NCBI chrNW_004936487:15,661,133...15,696,267 JBrowse link
aerobic respiration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adsl adenylosuccinate lyase ISO RGD PMID:3777158 RGD:1598765 NCBI chrNW_004936492:1,423,780...1,440,825 JBrowse link
G Atp5f1d ATP synthase F1 subunit delta involved_in ISO (PMID:29478781) UniProt PMID:29478781 NCBI chrNW_004936588:612,255...614,894 JBrowse link
G Bloc1s1 biogenesis of lysosomal organelles complex 1 subunit 1 involved_in ISO (PMID:22309213) UniProt PMID:22309213 NCBI chrNW_004936646:186,422...190,870 JBrowse link
G Cat catalase acts_upstream_of_or_within ISO (MGI:3050704|PMID:15178682) MGI PMID:15178682 MGI:3050704 NCBI chrNW_004936533:3,601,270...3,637,128 JBrowse link
G Fxn frataxin acts_upstream_of_or_within ISO (MGI:3611157|PMID:16278235)
(MGI:2158372|PMID:9405681)
MGI PMID:9405681 PMID:16278235 MGI:2158372 MGI:3611157 NCBI chrNW_004936503:5,323,206...5,343,228 JBrowse link
G LOC101967907 protoheme IX farnesyltransferase, mitochondrial acts_upstream_of_or_within ISO (MGI:3640032|PMID:16782876) MGI PMID:16782876 MGI:3640032 NCBI chrNW_004936724:783,591...905,625 JBrowse link
G Mdh2 malate dehydrogenase 2 involved_in ISO (PMID:27989324) UniProt PMID:27989324 NCBI chrNW_004936543:2,194,074...2,208,626 JBrowse link
G Mtfr1 mitochondrial fission regulator 1 involved_in ISO (MGI:5320275|PMID:20568109) UniProt PMID:20568109 MGI:5320275 NCBI chrNW_004936496:8,171,020...8,223,712 JBrowse link
G Mtfr2 mitochondrial fission regulator 2 involved_in ISO (MGI:5320275|PMID:20568109) UniProt PMID:20568109 MGI:5320275 NCBI chrNW_004936560:3,656,639...3,670,923 JBrowse link
G Oxa1l OXA1L mitochondrial inner membrane protein involved_in ISO (PMID:7991568) UniProt PMID:7991568 NCBI chrNW_004936722:1,524,116...1,528,659 JBrowse link
G Pank2 pantothenate kinase 2 acts_upstream_of_or_within ISO (MGI:5461110|PMID:22983956) MGI PMID:22983956 MGI:5461110 NCBI chrNW_004936485:14,785,050...14,804,258 JBrowse link
G Sirt3 sirtuin 3 involved_in ISO (PMID:22309213) UniProt PMID:22309213 NCBI chrNW_004936888:63,131...78,536 JBrowse link
G Ucn urocortin ISO negative regulation RGD PMID:11597609 RGD:5508185 NCBI chrNW_004936493:5,258,574...5,260,692 JBrowse link
glycerophosphate shuttle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gpd1 glycerol-3-phosphate dehydrogenase 1 acts_upstream_of_or_within ISO (MGI:1927687|PMID:11147825) MGI PMID:11147825 MGI:1927687 NCBI chrNW_004936512:7,762,325...7,770,007 JBrowse link
malate-aspartate shuttle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc1a3 solute carrier family 1 member 3 ISO RGD PMID:15242733 RGD:1642939 NCBI chrNW_004936518:5,216,343...5,291,107 JBrowse link
G Slc25a12 solute carrier family 25 member 12 acts_upstream_of_or_within
involved_in
ISO (MGI:3708219|PMID:17213189)
(PMID:11566871)
RGD
MGI
UniProt
PMID:11566871 PMID:17213189 PMID:19764902 MGI:3708219 RGD:13628741 NCBI chrNW_004936509:1,994,082...2,077,731 JBrowse link
G Slc25a13 solute carrier family 25 member 13 involved_in
acts_upstream_of_or_within
ISO (PMID:11566871)
(MGI:3708219|PMID:17213189)
UniProt
MGI
PMID:11566871 PMID:17213189 MGI:3708219 NCBI chrNW_004936585:4,061,297...4,215,912 JBrowse link
mitochondrial ATP synthesis coupled electron transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bid BH3 interacting domain death agonist acts_upstream_of_or_within ISO (MGI:5662300|PMID:26219591) MGI PMID:26219591 MGI:5662300 NCBI chrNW_004936807:708,340...750,127 JBrowse link
G Coq7 coenzyme Q7, hydroxylase acts_upstream_of_or_within ISO (MGI:3820177|PMID:18635541) MGI PMID:18635541 MGI:3820177 NCBI chrNW_004936501:5,035,986...5,043,864 JBrowse link
G Dguok deoxyguanosine kinase ISO RGD PMID:30404003 RGD:15039296 NCBI chrNW_004936556:226,643...263,517 JBrowse link
G LOC101966578 cytochrome c oxidase assembly factor 6 homolog involved_in ISO (PMID:24549041), (PMID:25959673) UniProt PMID:24549041 PMID:25959673 NCBI chrNW_004936484:17,812,157...17,815,837 JBrowse link
G Mtch2 mitochondrial carrier 2 acts_upstream_of_or_within ISO (MGI:5662300|PMID:26219591) MGI PMID:26219591 MGI:5662300 NCBI chrNW_004936562:1,622,341...1,644,191 JBrowse link
G Ndufa12 NADH:ubiquinone oxidoreductase subunit A12 involved_in ISO (PMID:24746669) CAFA PMID:24746669 NCBI chrNW_004936507:11,254,729...11,256,395 JBrowse link
G Ndufb6 NADH:ubiquinone oxidoreductase subunit B6 involved_in ISO (PMID:24746669) CAFA PMID:24746669 NCBI chrNW_004936524:1,231,744...1,243,783 JBrowse link
G Ndufs2 NADH:ubiquinone oxidoreductase core subunit S2 involved_in ISO (PMID:24746669) CAFA PMID:24746669 NCBI chrNW_004936903:503,633...514,235 JBrowse link
G Ndufv1 NADH:ubiquinone oxidoreductase core subunit V1 involved_in ISO (PMID:24746669) CAFA PMID:24746669 NCBI chrNW_004936599:2,169,434...2,173,090 JBrowse link
G Ndufv3 NADH:ubiquinone oxidoreductase subunit V3 involved_in ISO (PMID:24746669) CAFA PMID:24746669 NCBI chrNW_004936500:1,102,724...1,113,856 JBrowse link
G Snca synuclein alpha acts_upstream_of_or_within ISO (MGI:3607411|PMID:16260631) MGI PMID:16260631 MGI:3607411 NCBI chrNW_004936685:2,077,017...2,175,298 JBrowse link
G Tafazzin tafazzin, phospholipid-lysophospholipid transacylase involved_in ISO (PMID:15304507) BHF-UCL PMID:15304507 NCBI chrNW_004936809:1,160,265...1,168,956 JBrowse link
mitochondrial ATP synthesis coupled proton transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5f1a ATP synthase F1 subunit alpha involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936517:743,036...752,836 JBrowse link
G Atp5f1b ATP synthase F1 subunit beta involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936646:951,236...958,907 JBrowse link
G Atp5f1c ATP synthase F1 subunit gamma involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936484:7,016,049...7,031,060 JBrowse link
G Atp5f1d ATP synthase F1 subunit delta involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936588:612,255...614,894 JBrowse link
G Atp5f1e ATP synthase F1 subunit epsilon involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936530:1,509,605...1,513,033 JBrowse link
G Atp5me ATP synthase membrane subunit e involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936477:22,416,505...22,417,543 JBrowse link
G Atp5mf ATP synthase membrane subunit f involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936750:1,716,752...1,725,700 JBrowse link
G Atp5mg ATP synthase membrane subunit g involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936542:3,453,287...3,461,125 JBrowse link
G Atp5pb ATP synthase peripheral stalk-membrane subunit b involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936690:120,572...135,509 JBrowse link
G Atp5pd ATP synthase peripheral stalk subunit d involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936594:354,416...359,415 JBrowse link
G Atp5pf ATP synthase peripheral stalk subunit F6 involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chrNW_004936640:1,916,711...1,924,823 JBrowse link
G Atp5po ATP synthase peripheral stalk subunit OSCP involved_in ISO (PMID:15850986) UniProt PMID:15850986 NCBI chrNW_004936500:8,444,681...8,454,694 JBrowse link
G Stoml2 stomatin like 2 involved_in ISO (PMID:21746876)
(MGI:3849358|PMID:19360003), (MGI:5438519|PMID:23028053)
UniProt PMID:19360003 PMID:21746876 PMID:23028053 MGI:3849358 MGI:5438519 NCBI chrNW_004936524:3,129,149...3,132,405 JBrowse link
mitochondrial electron transport, cytochrome c to oxygen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afg1l AFG1 like ATPase involved_in ISO (PMID:27323408) UniProt PMID:27323408 NCBI chrNW_004936564:4,553,758...4,755,126 JBrowse link
G LOC101956526 cytochrome c oxidase subunit 4 isoform 2, mitochondrial involved_in ISO (PMID:11311561) UniProt PMID:11311561 NCBI chrNW_004936485:18,631,826...18,637,675 JBrowse link
mitochondrial electron transport, NADH to ubiquinone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdnf brain derived neurotrophic factor ISO RGD PMID:15341590 RGD:1358393 NCBI chrNW_004936540:5,530,081...5,582,765 JBrowse link
G Coq9 coenzyme Q9 acts_upstream_of_or_within ISO (MGI:5468078|PMID:23255162) MGI PMID:23255162 MGI:5468078 NCBI chrNW_004936475:9,502,638...9,517,601 JBrowse link
G Dld dihydrolipoamide dehydrogenase acts_upstream_of_or_within ISO (MGI:3622835|PMID:15009635) MGI PMID:15009635 MGI:3622835 NCBI chrNW_004936479:16,247,230...16,271,597 JBrowse link
G Ndufa10 NADH:ubiquinone oxidoreductase subunit A10 acts_upstream_of_or_within ISO (MGI:5568152|PMID:24652937) MGI PMID:24652937 MGI:5568152 NCBI chrNW_004936745:1,436,257...1,471,785 JBrowse link
G Ndufs1 NADH:ubiquinone oxidoreductase core subunit S1 involved_in ISO (PMID:31557978) UniProt PMID:31557978 NCBI chrNW_004936631:2,503,353...2,538,957 JBrowse link
G Ndufs2 NADH:ubiquinone oxidoreductase core subunit S2 involved_in ISO (PMID:30922174) UniProt PMID:30922174 RGD:42722001 NCBI chrNW_004936903:503,633...514,235 JBrowse link
G Ndufs3 NADH:ubiquinone oxidoreductase core subunit S3 involved_in ISO (PMID:14729820), (PMID:30140060)
(MGI:6391555|PMID:31916679), (MGI:6505357|PMID:33148885)
UniProt PMID:14729820 PMID:30140060 PMID:31916679 PMID:33148885 MGI:6391555 MGI:6505357 NCBI chrNW_004936562:1,667,780...1,674,670 JBrowse link
G Ndufs7 NADH:ubiquinone oxidoreductase core subunit S7 involved_in ISO (PMID:17275378) UniProt PMID:17275378 NCBI chrNW_004936588:715,093...720,035 JBrowse link
G Ndufs8 NADH:ubiquinone oxidoreductase core subunit S8 involved_in ISO (PMID:22499348) UniProt PMID:22499348 NCBI chrNW_004936599:2,081,493...2,085,635 JBrowse link
G Ndufv2 NADH:ubiquinone oxidoreductase core subunit V2 involved_in ISO (PMID:12754703) UniProt PMID:12754703 NCBI chrNW_004936670:2,742,553...2,772,697 JBrowse link
mitochondrial electron transport, succinate to ubiquinone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sdhaf2 succinate dehydrogenase complex assembly factor 2 involved_in ISO (PMID:19628817) UniProt PMID:19628817 NCBI chrNW_004936581:1,607,741...1,628,347 JBrowse link
mitochondrial electron transport, ubiquinol to cytochrome c term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101956274 cytochrome b-c1 complex subunit 1, mitochondrial acts_upstream_of_or_within ISO (MGI:3640022|PMID:16782889) MGI PMID:16782889 MGI:3640022 NCBI chrNW_004936529:385,942...396,196 JBrowse link
G LOC101965457 ubiquinol-cytochrome-c reductase complex assembly factor 3 involved_in ISO (PMID:25008109) UniProt PMID:25008109 NCBI chrNW_004936581:590,503...591,225 JBrowse link
negative regulation of cellular respiration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flcn folliculin involved_in ISO (MGI:5463828|PMID:23150719) UniProt PMID:23150719 MGI:5463828 NCBI chrNW_004936741:881,150...901,296 JBrowse link
G Trap1 TNF receptor associated protein 1 involved_in ISO (PMID:23564345) UniProt PMID:23564345 NCBI chrNW_004936694:667,687...704,994 JBrowse link
negative regulation of mitochondrial electron transport, NADH to ubiquinone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnajc15 DnaJ heat shock protein family (Hsp40) member C15 acts_upstream_of_or_within ISO (MGI:5529421|PMID:23530063) MGI PMID:23530063 MGI:5529421 NCBI chrNW_004936747:800,070...864,299 JBrowse link
negative regulation of oxidative phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in ISO (MGI:3778600|PMID:18178581), (MGI:5554485|PMID:24234654) UniProt PMID:18178581 PMID:24234654 MGI:3778600 MGI:5554485 NCBI chrNW_004936599:3,033,854...3,046,364 JBrowse link
G Apoc3 apolipoprotein C3 ISO RGD PMID:11177239 RGD:1599177 NCBI chrNW_004936542:2,106,927...2,108,412 JBrowse link
G Mlxipl MLX interacting protein like involved_in ISO (PMID:19995986) BHF-UCL PMID:19995986 NCBI chrNW_004936543:2,839,105...2,856,997 JBrowse link
G Pde12 phosphodiesterase 12 involved_in ISO (PMID:21666256) UniProt PMID:21666256 NCBI chrNW_004936473:7,894,026...7,897,844 JBrowse link
G Pde2a phosphodiesterase 2A involved_in ISO (MGI:5294502|PMID:21724846) UniProt PMID:21724846 MGI:5294502 NCBI chrNW_004936498:1,856,256...1,944,405 JBrowse link
G Ppif peptidylprolyl isomerase F involved_in ISO (MGI:5487522|PMID:21281446) UniProt PMID:21281446 MGI:5487522 NCBI chrNW_004936521:404,574...411,381 JBrowse link
G Rhoa ras homolog family member A involved_in ISO (MGI:5640904|PMID:25398325) CACAO PMID:25398325 MGI:5640904 NCBI chrNW_004936529:1,000,050...1,045,655 JBrowse link
G Tnf tumor necrosis factor ISO RGD PMID:8903396 RGD:14995471 NCBI chrNW_004936727:1,936,066...1,937,766 JBrowse link
oxidative phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak2 adenylate kinase 2 ISO RGD PMID:18423391 RGD:5147997 NCBI chrNW_004936474:15,887,014...15,908,522 JBrowse link
G Chchd10 coiled-coil-helix-coiled-coil-helix domain containing 10 involved_in ISO (PMID:20888800) BHF-UCL PMID:20888800 NCBI chrNW_004936619:1,323,247...1,325,520 JBrowse link
G CUNH2orf69 chromosome unknown C2orf69 homolog involved_in ISO (PMID:33945503) UniProt PMID:33945503 NCBI chrNW_004936825:936,690...948,102 JBrowse link
G Fxn frataxin acts_upstream_of_or_within ISO (MGI:3708076|PMID:17404227)
(MGI:3611157|PMID:16278235)
MGI PMID:16278235 PMID:17404227 MGI:3611157 MGI:3708076 NCBI chrNW_004936503:5,323,206...5,343,228 JBrowse link
G LOC101971854 surfeit locus protein 1 involved_in ISO (PMID:20888800) BHF-UCL PMID:20888800 NCBI chrNW_004936669:3,527,741...3,532,087 JBrowse link
G Msh2 mutS homolog 2 acts_upstream_of_or_within ISO (MGI:3640229|PMID:16805809) MGI PMID:16805809 MGI:3640229 NCBI chrNW_004936508:4,943,987...5,013,356 JBrowse link
G Nipsnap2 nipsnap homolog 2 involved_in ISO (PMID:20888800) BHF-UCL PMID:20888800 NCBI chrNW_004936543:7,928,250...7,957,436 JBrowse link
G Tefm transcription elongation factor, mitochondrial involved_in ISO (PMID:21278163) UniProt PMID:21278163 NCBI chrNW_004936538:2,803,195...2,812,939 JBrowse link
plasma membrane ATP synthesis coupled electron transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101966578 cytochrome c oxidase assembly factor 6 homolog involved_in ISO (PMID:26160915) UniProt PMID:26160915 NCBI chrNW_004936484:17,812,157...17,815,837 JBrowse link
positive regulation of cellular respiration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chchd4 coiled-coil-helix-coiled-coil-helix domain containing 4 acts_upstream_of_or_within ISO (MGI:5516376|PMID:24101517) MGI PMID:24101517 MGI:5516376 NCBI chrNW_004936602:93,126...99,695 JBrowse link
G Ifnar1 interferon alpha and beta receptor subunit 1 involved_in ISO (PMID:25930096) ARUK-UCL PMID:25930096 NCBI chrNW_004936500:8,953,809...8,975,261 JBrowse link
G Ifng interferon gamma involved_in ISO (MGI:6304699|PMID:29061364) ARUK-UCL PMID:29061364 MGI:6304699 NCBI chrNW_004936545:6,139,130...6,144,543 JBrowse link
G Ifnlr1 interferon lambda receptor 1 involved_in ISO (PMID:25930096) ARUK-UCL PMID:25930096 NCBI chrNW_004936474:9,209,815...9,220,670 JBrowse link
G Il10rb interleukin 10 receptor subunit beta involved_in ISO (PMID:25930096) ARUK-UCL PMID:25930096 NCBI chrNW_004936500:9,033,077...9,057,465 JBrowse link
G Mfn2 mitofusin 2 ISO mitochondrial function RGD PMID:25147362 RGD:13204807 NCBI chrNW_004936474:767,754...795,258 JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:22842522 RGD:7207891 NCBI chrNW_004936470:20,480,844...20,485,955 JBrowse link
G Opn3 opsin 3 involved_in ISO (MGI:6392469|PMID:32040503) UniProt PMID:32040503 MGI:6392469 NCBI chrNW_004936526:8,833,495...8,876,631 JBrowse link
G Ppargc1a PPARG coactivator 1 alpha involved_in ISO (MGI:5463828|PMID:23150719) UniProt PMID:23150719 MGI:5463828 NCBI chrNW_004936477:4,881,230...5,488,208 JBrowse link
G Prelid1 PRELI domain containing 1 involved_in ISO (PMID:21364629), (PMID:23931759) UniProt PMID:21364629 PMID:23931759 NCBI chrNW_004936597:1,580,849...1,584,445 JBrowse link
positive regulation of mitochondrial ATP synthesis coupled electron transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnb1 cyclin B1 involved_in ISO (PMID:24746669) CAFA PMID:24746669 NCBI chrNW_004936480:400,287...407,677 JBrowse link
G Cdk1 cyclin dependent kinase 1 involved_in ISO (PMID:24746669) CAFA PMID:24746669 NCBI chrNW_004936614:2,300,682...2,313,611 JBrowse link
G Chchd2 coiled-coil-helix-coiled-coil-helix domain containing 2 involved_in ISO (PMID:28589937) FlyBase PMID:28589937 NCBI chrNW_004936543:7,860,432...7,864,050 JBrowse link
positive regulation of mitochondrial electron transport, NADH to ubiquinone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Iscu iron-sulfur cluster assembly enzyme involved_in ISO (PMID:20436681) ARUK-UCL PMID:20436681 NCBI chrNW_004936769:492,024...498,587 JBrowse link
G Park7 Parkinsonism associated deglycase involved_in ISO (PMID:19822128)
(MGI:5582165|PMID:19822128)
ParkinsonsUK-UCL PMID:19822128 MGI:5582165 NCBI chrNW_004936623:2,422,780...2,436,817 JBrowse link
G Pink1 PTEN induced kinase 1 acts_upstream_of_or_within ISO (MGI:5568152|PMID:24652937) MGI PMID:24652937 MGI:5568152 NCBI chrNW_004936474:6,574,471...6,589,478 JBrowse link
positive regulation of oxidative phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gadd45gip1 GADD45G interacting protein 1 acts_upstream_of_or_within ISO (MGI:5648685|PMID:25883318) MGI PMID:25883318 MGI:5648685 NCBI chrNW_004936659:2,008,025...2,010,052 JBrowse link
G Lexm lymphocyte expansion molecule acts_upstream_of_or_within ISO (MGI:5648685|PMID:25883318) MGI PMID:25883318 MGI:5648685 NCBI chrNW_004936522:6,456,423...6,479,654 JBrowse link
G LOC101972576 valosin containing protein involved_in ISO (PMID:23498975) ParkinsonsUK-UCL PMID:23498975 NCBI chrNW_004936524:3,085,959...3,102,461 JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:18414044 RGD:10059611 NCBI chrNW_004936470:20,480,844...20,485,955 JBrowse link
G Myog myogenin ISO RGD PMID:10225962 RGD:9686132 NCBI chrNW_004936567:1,507,042...1,509,814 JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator involved_in ISO (PMID:30451898) UniProt PMID:30451898 NCBI chrNW_004936501:11,998,064...11,999,431 JBrowse link
regulation of aerobic respiration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in ISO (MGI:3759354|PMID:17828264) UniProt PMID:17828264 MGI:3759354 NCBI chrNW_004936599:3,033,854...3,046,364 JBrowse link
G Akt1 AKT serine/threonine kinase 1 ISO RGD PMID:24601882 RGD:39128160 NCBI chrNW_004936621:620,163...639,115 JBrowse link
G Bnip3 BCL2 interacting protein 3 involved_in ISO (MGI:3796473|PMID:18281291) ParkinsonsUK-UCL PMID:18281291 MGI:3796473 NCBI chrNW_004936486:18,449,371...18,460,435 JBrowse link
G Cbfa2t3 CBFA2/RUNX1 partner transcriptional co-repressor 3 involved_in ISO (PMID:23840896) UniProt PMID:23840896 NCBI chrNW_004936641:857,483...875,527 JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in ISO (MGI:3796473|PMID:18281291) ParkinsonsUK-UCL PMID:18281291 MGI:3796473 NCBI chrNW_004936495:5,770,988...5,816,157 JBrowse link
G Ide insulin degrading enzyme involved_in ISO (PMID:23525105) ARUK-UCL PMID:23525105 NCBI chrNW_004936601:2,230,477...2,318,562 JBrowse link
G LOC101972576 valosin containing protein involved_in ISO (PMID:23498975) ParkinsonsUK-UCL PMID:23498975 NCBI chrNW_004936524:3,085,959...3,102,461 JBrowse link
G Nop53 NOP53 ribosome biogenesis factor involved_in ISO (PMID:24556985) UniProt PMID:24556985 NCBI chrNW_004936664:1,334,487...1,343,867 JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 involved_in ISO (PMID:29364879), (PMID:29452640)
(MGI:6148506|PMID:29323231)
UniProt PMID:29323231 PMID:29364879 PMID:29452640 MGI:6148506 NCBI chrNW_004936646:1,422,844...1,427,929 JBrowse link
G Trpv4 transient receptor potential cation channel subfamily V member 4 involved_in ISO (MGI:5440106|PMID:23021218) UniProt PMID:23021218 MGI:5440106 NCBI chrNW_004936769:1,424,526...1,447,547 JBrowse link
regulation of cellular respiration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cisd1 CDGSH iron sulfur domain 1 acts_upstream_of_or_within ISO (MGI:3703929|PMID:17376863) MGI PMID:17376863 MGI:3703929 NCBI chrNW_004936614:4,706,463...4,723,756 JBrowse link
G Noa1 nitric oxide associated 1 involved_in ISO (PMID:19103604)
(MGI:5292654|PMID:21118999)
UniProt PMID:19103604 PMID:21118999 MGI:5292654 NCBI chrNW_004936482:19,057,360...19,073,031 JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha acts_upstream_of_or_within ISO (MGI:5582991|PMID:24691033) MGI PMID:24691033 MGI:5582991 NCBI chrNW_004936566:3,924,013...3,951,052 JBrowse link
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO (MGI:3689653|PMID:16966381), (MGI:4881376|PMID:20691904) UniProt PMID:16966381 PMID:20691904 MGI:3689653 MGI:4881376 NCBI chrNW_004936491:1,989,429...2,032,430 JBrowse link
G Prdm16 PR/SET domain 16 involved_in ISO (MGI:3770355|PMID:17618855), (MGI:4365360|PMID:18483224) UniProt PMID:17618855 PMID:18483224 MGI:3770355 MGI:4365360 NCBI chrNW_004936737:400,819...446,768 JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha ISO RGD PMID:12562968 RGD:1580676 NCBI chrNW_004936659:2,750,015...2,765,914 JBrowse link
G Slc25a23 solute carrier family 25 member 23 acts_upstream_of_or_within ISO (MGI:5490167|PMID:23344948) MGI PMID:23344948 MGI:5490167 NCBI chrNW_004936588:3,792,760...3,804,788 JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (MGI:5829115|PMID:28069950) MGI PMID:28069950 MGI:5829115 NCBI chrNW_004936529:264,535...266,451 JBrowse link
regulation of mitochondrial ATP synthesis coupled proton transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atpsckmt ATP synthase c subunit lysine N-methyltransferase involved_in ISO (PMID:30530489)
(MGI:6277238|PMID:30530489)
UniProt PMID:30530489 MGI:6277238 NCBI chrNW_004936643:2,339,073...2,354,780 JBrowse link
G Dnajc30 DnaJ heat shock protein family (Hsp40) member C30 involved_in ISO (MGI:6245118|PMID:30318146) UniProt PMID:30318146 MGI:6245118 NCBI chrNW_004936543:2,895,771...2,897,761 JBrowse link
regulation of oxidative phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISO (MGI:5500881|PMID:23604518) UniProt PMID:23604518 MGI:5500881 NCBI chrNW_004936809:615,133...634,618 JBrowse link
G Ak4 adenylate kinase 4 involved_in ISO (PMID:26980435) UniProt PMID:26980435 NCBI chrNW_004936692:2,593,409...2,654,583 JBrowse link
G Atp7a ATPase copper transporting alpha acts_upstream_of_or_within ISO (MGI:78039|PMID:8550574) MGI PMID:8550574 MGI:78039 NCBI chrNW_004936683:2,874,022...2,936,214 JBrowse link
G LOC101958099 cytochrome c oxidase subunit 7A-related protein, mitochondrial involved_in ISO (MGI:5607399|PMID:23857330) UniProt PMID:23857330 MGI:5607399 NCBI chrNW_004936508:9,279,974...9,287,279 JBrowse link
G LOC101975274 ubiquinol-cytochrome-c reductase complex assembly factor 2 involved_in ISO (PMID:22363741)
(MGI:5520038|PMID:22363741)
UniProt PMID:22363741 MGI:5520038 NCBI chrNW_004936476:25,241,426...25,254,057 JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:22629444 RGD:7240532 NCBI chrNW_004936470:20,480,844...20,485,955 JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO (PMID:20871098) ParkinsonsUK-UCL PMID:20871098 NCBI chrNW_004936474:6,574,471...6,589,478 JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 involved_in ISO (PMID:29364879), (PMID:29452640)
(MGI:6148506|PMID:29323231)
UniProt PMID:29323231 PMID:29364879 PMID:29452640 MGI:6148506 NCBI chrNW_004936646:1,422,844...1,427,929 JBrowse link
G Slc25a23 solute carrier family 25 member 23 acts_upstream_of_or_within ISO (MGI:5490167|PMID:23344948) MGI PMID:23344948 MGI:5490167 NCBI chrNW_004936588:3,792,760...3,804,788 JBrowse link
G Slc25a33 solute carrier family 25 member 33 involved_in ISO (PMID:20453889) UniProt PMID:20453889 NCBI chrNW_004936623:3,585,372...3,603,515 JBrowse link
respiratory electron transport chain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Coq7 coenzyme Q7, hydroxylase acts_upstream_of_or_within ISO (MGI:2154595|PMID:11585841), (MGI:4359329|PMID:19478076) MGI PMID:11585841 PMID:19478076 MGI:2154595 MGI:4359329 NCBI chrNW_004936501:5,035,986...5,043,864 JBrowse link
G Etfrf1 electron transfer flavoprotein regulatory factor 1 involved_in ISO (PMID:27499296) UniProt PMID:27499296 NCBI chrNW_004936548:2,114,271...2,123,187 JBrowse link
G Gba glucosylceramidase beta acts_upstream_of_or_within ISO (MGI:5501380|PMID:23707074) MGI PMID:23707074 MGI:5501380 NCBI chrNW_004936580:4,715,869...4,720,752 JBrowse link
G LOC101957084 plectin involved_in ISO (MGI:5660667|PMID:26019234) MGI PMID:26019234 MGI:5660667 NCBI chrNW_004936470:8,194,124...8,252,139 JBrowse link
G LOC101958033 uncharacterized LOC101958033 acts_upstream_of_or_within ISO (MGI:5299279|PMID:21824519) MGI PMID:21824519 MGI:5299279 NCBI chrNW_004936653:3,268,229...3,543,173 JBrowse link
G LOC101959727 cytochrome b-c1 complex subunit Rieske, mitochondrial involved_in ISO (PMID:31883641) UniProt PMID:31883641 NCBI chrNW_004936570:6,044,969...6,051,046 JBrowse link
G LOC101962609 protein SCO2 homolog, mitochondrial acts_upstream_of_or_within ISO (MGI:4412318|PMID:19837698) MGI PMID:19837698 MGI:4412318 NCBI chrNW_004936629:318,581...320,804 JBrowse link
G Mybbp1a MYB binding protein 1a acts_upstream_of_or_within ISO (MGI:3032469|PMID:14744933) MGI PMID:14744933 MGI:3032469 NCBI chrNW_004936677:1,095,022...1,108,545 JBrowse link
G Ndufa5 NADH:ubiquinone oxidoreductase subunit A5 acts_upstream_of_or_within ISO (MGI:5548237|PMID:24154540) MGI PMID:24154540 MGI:5548237 NCBI chrNW_004936605:1,915,246...1,928,853 JBrowse link
G Ndufs4 NADH:ubiquinone oxidoreductase subunit S4 acts_upstream_of_or_within ISO (MGI:6277626|PMID:30391276) MGI PMID:30391276 MGI:6277626 NCBI chrNW_004936480:13,829,093...13,932,202 JBrowse link
G Ndufs6 NADH:ubiquinone oxidoreductase subunit S6 acts_upstream_of_or_within ISO (MGI:5319010|PMID:22474353) MGI PMID:22474353 MGI:5319010 NCBI chrNW_004936815:144,994...157,788 JBrowse link
G Pink1 PTEN induced kinase 1 involved_in ISO (MGI:3813389|PMID:18687901) ParkinsonsUK-UCL PMID:18687901 MGI:3813389 NCBI chrNW_004936474:6,574,471...6,589,478 JBrowse link
G Polg2 DNA polymerase gamma 2, accessory subunit acts_upstream_of_or_within ISO (MGI:5465384|PMID:23197651) MGI PMID:23197651 MGI:5465384 NCBI chrNW_004936541:4,988,469...5,004,110 JBrowse link
G Ppargc1a PPARG coactivator 1 alpha acts_upstream_of_or_within ISO (MGI:3032469|PMID:14744933) MGI PMID:14744933 MGI:3032469 NCBI chrNW_004936477:4,881,230...5,488,208 JBrowse link
G Sdha succinate dehydrogenase complex flavoprotein subunit A involved_in ISO (PMID:7550341) RGD
UniProt
PMID:7550341 PMID:16520240 RGD:2306906 NCBI chrNW_004936815:1,148,963...1,167,585 JBrowse link
G Sdhb succinate dehydrogenase complex iron sulfur subunit B ISO RGD PMID:16520240 RGD:2306906 NCBI chrNW_004936474:3,993,224...4,021,359 JBrowse link
G Sod2 superoxide dismutase 2 acts_upstream_of_or_within ISO (MGI:1931647|PMID:11226230), (MGI:4359329|PMID:19478076) MGI PMID:11226230 PMID:19478076 MGI:1931647 MGI:4359329 NCBI chrNW_004936489:11,178,338...11,191,601 JBrowse link
tricarboxylic acid cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aco2 aconitase 2 acts_upstream_of_or_within ISO (PMID:9630632) RGD
MGI
PMID:9630632 PMID:9712727 RGD:2306877 NCBI chrNW_004936492:407,482...452,538 JBrowse link
G Cs citrate synthase ISO RGD PMID:938457 PMID:9712727 RGD:2306828 RGD:2306877 NCBI chrNW_004936646:676,926...704,988 JBrowse link
G Dlst dihydrolipoamide S-succinyltransferase involved_in ISO (PMID:30929736) UniProt PMID:30929736 NCBI chrNW_004936488:4,038,985...4,061,071 JBrowse link
G Fh fumarate hydratase ISO RGD PMID:938457 RGD:2306828 NCBI chrNW_004936526:8,936,096...8,965,155 JBrowse link
G Idh3a isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha involved_in ISO (PMID:2252888) RGD
UniProt
PMID:938457 PMID:2252888 RGD:2306828 NCBI chrNW_004936471:36,823,003...36,842,576 JBrowse link
G Idh3b isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta ISO RGD PMID:938457 RGD:2306828 NCBI chrNW_004936485:16,033,287...16,038,097 JBrowse link
G Idh3g isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma ISO RGD PMID:938457 RGD:2306828 NCBI chrNW_004936809:666,231...675,279 JBrowse link
G Mdh2 malate dehydrogenase 2 ISO RGD PMID:938457 RGD:2306828 NCBI chrNW_004936543:2,194,074...2,208,626 JBrowse link
G Ogdh oxoglutarate dehydrogenase ISO RGD PMID:9712727 RGD:2306877 NCBI chrNW_004936478:19,506,845...19,584,411 JBrowse link
G Ogdhl oxoglutarate dehydrogenase L involved_in ISO PMID:18783430 UniProt PMID:18783430 RGD:42721998 NCBI chrNW_004936728:573,079...599,155 JBrowse link
G Sdhd succinate dehydrogenase complex subunit D involved_in ISO (PMID:9533030) UniProt PMID:9533030 NCBI chrNW_004936612:2,357,336...2,369,204 JBrowse link
G Sucla2 succinate-CoA ligase ADP-forming subunit beta ISO RGD PMID:17403370 RGD:2306915 NCBI chrNW_004936565:1,313,150...1,355,693 JBrowse link
G Suclg1 succinate-CoA ligase GDP/ADP-forming subunit alpha ISO RGD PMID:17403370 RGD:2306915 NCBI chrNW_004936650:3,278,769...3,313,537 JBrowse link
G Suclg2 succinate-CoA ligase GDP-forming subunit beta ISO RGD PMID:17403370 RGD:2306915 NCBI chrNW_004936603:243,113...378,526 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12135
    cellular process 11327
      cellular metabolic process 6989
        generation of precursor metabolites and energy 325
          energy derivation by oxidation of organic compounds 234
            cellular respiration 154
              aerobic respiration + 109
              anaerobic respiration + 0
              negative regulation of cellular respiration + 11
              positive regulation of cellular respiration + 18
              regulation of cellular respiration + 51
              respiratory electron transport chain + 52
paths to the root