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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular respiration
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Accession:GO:0045333 term browser browse the term
Definition:The enzymatic release of energy from inorganic and organic compounds (especially carbohydrates and fats) which either requires oxygen (aerobic respiration) or does not (anaerobic respiration).
Synonyms:exact_synonym: oxidative metabolic process;   oxidative metabolism
 broad_synonym: respiration
 xref: Wikipedia:Cellular_respiration


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cellular respiration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAX BCL2 associated X, apoptosis regulator ISO RGD PMID:12460673 RGD:628373 NCBI chr 1:107,423,388...107,426,464
Ensembl chr 1:107,422,424...107,426,464
JBrowse link
G COQ10A coenzyme Q10A involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:580,022...583,264
Ensembl chr10:552,720...582,829
JBrowse link
G COQ10B coenzyme Q10B involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr37:6,984,886...7,005,572
Ensembl chr37:6,984,935...7,005,406
JBrowse link
G COX10 cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:37,853,495...37,982,228
Ensembl chr 5:37,852,875...37,982,243
JBrowse link
G CYP1A2 cytochrome P450 family 1 subfamily A member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:73448|PMID:7761462) Ensembl
MGI
PMID:7761462 GO_REF:0000107 MGI:73448 NCBI chr30:37,818,400...37,824,192
Ensembl chr30:37,799,140...37,824,135
JBrowse link
G LYRM7 LYR motif containing 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:19,560,143...19,585,350
Ensembl chr11:19,560,250...19,584,881
JBrowse link
G MTLN mitoregulin involved_in ISO (MGI:6393021|PMID:31296841) UniProt PMID:31296841 MGI:6393021
G MTLN mitoregulin involved_in IEA Ensembl GO_REF:0000107 Ensembl chr17:35,142,133...35,142,303 JBrowse link
G NDUFS1 NADH:ubiquinone oxidoreductase core subunit S1 involved_in ISO (PMID:15186778), (PMID:16478720) UniProt PMID:15186778 PMID:16478720 NCBI chr37:14,680,908...14,713,838
Ensembl chr37:14,683,083...14,713,754
JBrowse link
G NDUFS4 NADH:ubiquinone oxidoreductase subunit S4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:61,613,580...61,727,219
Ensembl chr 4:61,613,589...61,727,205
JBrowse link
G NFATC3 nuclear factor of activated T cells 3 acts_upstream_of_or_within ISO (MGI:2665260|PMID:12750314) MGI PMID:12750314 MGI:2665260 NCBI chr 5:81,294,656...81,434,256
Ensembl chr 5:81,296,214...81,434,250
JBrowse link
G NFATC4 nuclear factor of activated T cells 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2665260|PMID:12750314) Ensembl
MGI
PMID:12750314 GO_REF:0000107 MGI:2665260 NCBI chr 8:4,337,098...4,346,409
Ensembl chr 8:4,336,450...4,346,100
JBrowse link
G NR4A3 nuclear receptor subfamily 4 group A member 3 involved_in ISO (MGI:5645208|PMID:18325999) UniProt PMID:18325999 MGI:5645208 NCBI chr11:56,806,506...56,846,997
Ensembl chr11:56,812,804...56,847,689
JBrowse link
G SDHAF4 succinate dehydrogenase complex assembly factor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:33,080,545...33,089,944
Ensembl chr12:33,069,013...33,089,930
JBrowse link
G SLC25A13 solute carrier family 25 member 13 involved_in ISO (PMID:12851387) UniProt PMID:12851387 NCBI chr14:21,295,651...21,481,767
Ensembl chr14:21,296,512...21,482,236
JBrowse link
G SLC25A25 solute carrier family 25 member 25 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4947900|PMID:21296886) Ensembl
MGI
PMID:21296886 GO_REF:0000107 MGI:4947900 NCBI chr 9:55,358,348...55,394,624
Ensembl chr 9:55,360,043...55,394,519
JBrowse link
aerobic respiration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADSL adenylosuccinate lyase ISO RGD PMID:3777158 RGD:1598765 NCBI chr10:24,813,854...24,832,115 JBrowse link
G ATP5F1D ATP synthase F1 subunit delta involved_in ISO (PMID:29478781) UniProt PMID:29478781 NCBI chr20:57,547,575...57,550,110
Ensembl chr20:57,547,371...57,549,722
JBrowse link
G BLOC1S1 biogenesis of lysosomal organelles complex 1 subunit 1 involved_in ISO (PMID:22309213) UniProt PMID:22309213 NCBI chr10:116,993...120,244 JBrowse link
G CAT catalase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3050704|PMID:15178682) Ensembl
MGI
PMID:15178682 GO_REF:0000107 MGI:3050704 NCBI chr18:33,383,005...33,422,447
Ensembl chr18:33,383,005...33,422,447
JBrowse link
G COX10 cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3640032|PMID:16782876) Ensembl
MGI
PMID:16782876 GO_REF:0000107 MGI:3640032 NCBI chr 5:37,853,495...37,982,228
Ensembl chr 5:37,852,875...37,982,243
JBrowse link
G FXN frataxin acts_upstream_of_or_within ISO (MGI:2158372|PMID:9405681)
(MGI:3611157|PMID:16278235)
MGI PMID:9405681 PMID:16278235 MGI:2158372 MGI:3611157 NCBI chr 1:88,288,566...88,311,228
Ensembl chr 1:88,288,566...88,311,228
JBrowse link
G MDH2 malate dehydrogenase 2 involved_in ISO (PMID:27989324) UniProt PMID:27989324 NCBI chr 6:7,389,266...7,405,311 JBrowse link
G MT-CO1 mitochondrially encoded cytochrome c oxidase I involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr MT:5,349...6,893
Ensembl chr MT:5,349...6,893
JBrowse link
G MT-CO3 mitochondrially encoded cytochrome c oxidase III involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr MT:8,644...9,427
Ensembl chr MT:8,644...9,427
JBrowse link
G MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr MT:2,747...3,702
Ensembl chr MT:2,747...3,703
JBrowse link
G MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr MT:10,201...11,578
Ensembl chr MT:10,201...11,578
JBrowse link
G MTFR1 mitochondrial fission regulator 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr29:15,314,955...15,390,776
Ensembl chr29:15,315,069...15,389,458
JBrowse link
G MTFR1L mitochondrial fission regulator 1 like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:74,116,837...74,133,414
Ensembl chr 2:74,117,649...74,132,758
JBrowse link
G MTFR2 mitochondrial fission regulator 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:28,830,818...28,844,875
Ensembl chr 1:28,830,867...28,844,710
JBrowse link
G NDUFS7 NADH:ubiquinone oxidoreductase core subunit S7 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:57,443,264...57,448,892
Ensembl chr20:57,443,258...57,448,825
JBrowse link
G NDUFS8 NADH:ubiquinone oxidoreductase core subunit S8 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:49,796,558...49,800,805
Ensembl chr18:49,796,560...49,799,979
JBrowse link
G OXA1L OXA1L mitochondrial inner membrane protein involved_in ISO (PMID:7991568) UniProt PMID:7991568 NCBI chr 8:3,108,669...3,132,337
Ensembl chr 8:3,108,757...3,132,334
JBrowse link
G PANK2 pantothenate kinase 2 acts_upstream_of_or_within ISO (MGI:5461110|PMID:22983956) MGI PMID:22983956 MGI:5461110 NCBI chr24:17,461,406...17,475,248
Ensembl chr24:17,463,447...17,490,360
JBrowse link
G SDHB succinate dehydrogenase complex iron sulfur subunit B involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:81,158,291...81,190,110
Ensembl chr 2:81,158,291...81,190,109
JBrowse link
G SIRT3 sirtuin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:25,369,183...25,388,126
Ensembl chr18:25,369,382...25,388,118
JBrowse link
G UCN urocortin ISO negative regulation RGD PMID:11597609 RGD:5508185 NCBI chr17:21,278,512...21,280,404
Ensembl chr17:21,278,932...21,279,312
JBrowse link
G UQCRH ubiquinol-cytochrome c reductase hinge protein involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:14,082,954...14,092,690 JBrowse link
ATP synthesis coupled electron transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MT-CO2 mitochondrially encoded cytochrome c oxidase II involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr MT:7,034...7,717
Ensembl chr MT:7,034...7,717
JBrowse link
G ND4L NADH dehydrogenase subunit 4L involved_in IEA InterPro GO_REF:0000002 NCBI chr MT:9,911...10,207
Ensembl chr MT:9,911...10,207
JBrowse link
G NDUFA7 NADH:ubiquinone oxidoreductase subunit A7 involved_in IEA InterPro GO_REF:0000002 NCBI chr20:52,892,784...52,902,007 JBrowse link
G NDUFS1 NADH:ubiquinone oxidoreductase core subunit S1 involved_in IEA InterPro GO_REF:0000002 NCBI chr37:14,680,908...14,713,838
Ensembl chr37:14,683,083...14,713,754
JBrowse link
glycerophosphate shuttle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GPD1 glycerol-3-phosphate dehydrogenase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1927687|PMID:11147825) Ensembl
MGI
PMID:11147825 GO_REF:0000107 MGI:1927687 NCBI chr27:4,614,878...4,622,013
Ensembl chr27:4,614,864...4,621,922
JBrowse link
malate-aspartate shuttle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLC1A3 solute carrier family 1 member 3 ISO RGD PMID:15242733 RGD:1642939 NCBI chr 4:71,936,128...72,014,119
Ensembl chr 4:71,936,126...72,014,173
JBrowse link
G SLC25A12 solute carrier family 25 member 12 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
(PMID:21873635)
(MGI:3708219|PMID:17213189)
GO_Central
MGI
RGD
Ensembl
PMID:17213189 PMID:19764902 PMID:21873635 GO_REF:0000107 MGI:3708219 RGD:13628741 NCBI chr36:16,185,011...16,391,080
Ensembl chr36:16,185,649...16,483,016
JBrowse link
G SLC25A13 solute carrier family 25 member 13 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3708219|PMID:17213189)
GO_Central
MGI
PMID:17213189 PMID:21873635 MGI:3708219 NCBI chr14:21,295,651...21,481,767
Ensembl chr14:21,296,512...21,482,236
JBrowse link
G SLC25A18 solute carrier family 25 member 18 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr27:45,196,172...45,221,751
Ensembl chr27:45,196,670...45,221,297
JBrowse link
mitochondrial ATP synthesis coupled electron transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BID BH3 interacting domain death agonist acts_upstream_of_or_within ISO (MGI:5662300|PMID:26219591) MGI PMID:26219591 MGI:5662300 NCBI chr27:45,344,304...45,355,735
Ensembl chr27:45,337,145...45,384,059
JBrowse link
G COA6 cytochrome c oxidase assembly factor 6 involved_in ISO (PMID:24549041), (PMID:25959673) UniProt PMID:24549041 PMID:25959673 NCBI chr 4:5,447,252...5,454,500
Ensembl chr 4:5,447,249...5,454,456
JBrowse link
G COQ7 coenzyme Q7, hydroxylase acts_upstream_of_or_within ISO (MGI:3820177|PMID:18635541) MGI PMID:18635541 MGI:3820177 NCBI chr 6:25,912,936...25,922,123
Ensembl chr 6:25,912,954...25,929,655
JBrowse link
G DGUOK deoxyguanosine kinase ISO RGD PMID:30404003 RGD:15039296 NCBI chr17:49,107,085...49,139,366
Ensembl chr17:49,104,546...49,168,782
JBrowse link
G LOC100684565 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6 pseudogene involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr22:3,525,991...3,526,519 JBrowse link
G MTCH2 mitochondrial carrier 2 acts_upstream_of_or_within ISO (MGI:5662300|PMID:26219591) MGI PMID:26219591 MGI:5662300 NCBI chr18:42,023,484...42,045,331
Ensembl chr18:42,023,511...42,044,060
JBrowse link
G NDUFA12 NADH:ubiquinone oxidoreductase subunit A12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:34,971,944...34,996,458
Ensembl chr15:34,954,364...34,996,409
JBrowse link
G NDUFB6 NADH:ubiquinone oxidoreductase subunit B6 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:49,821,998...49,833,624
Ensembl chr22:3,526,115...3,526,501
JBrowse link
G NDUFS2 NADH:ubiquinone oxidoreductase core subunit S2 involved_in ISO (PMID:24746669) CAFA PMID:24746669 NCBI chr38:21,271,603...21,281,140
Ensembl chr38:21,271,675...21,285,279
JBrowse link
G NDUFV1 NADH:ubiquinone oxidoreductase core subunit V1 involved_in ISO (PMID:24746669) CAFA PMID:24746669 NCBI chr18:49,882,844...49,888,448
Ensembl chr18:49,882,907...49,888,434
JBrowse link
G NDUFV3 NADH:ubiquinone oxidoreductase subunit V3 involved_in ISO (PMID:24746669) CAFA PMID:24746669 NCBI chr31:37,118,201...37,131,035
Ensembl chr31:37,118,247...37,130,810
JBrowse link
G SNCA synuclein alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3607411|PMID:16260631) Ensembl
MGI
PMID:16260631 GO_REF:0000107 MGI:3607411 NCBI chr32:12,915,871...13,079,338
Ensembl chr32:12,916,215...13,060,383
JBrowse link
G TAFAZZIN tafazzin, phospholipid-lysophospholipid transacylase involved_in ISO (PMID:15304507) BHF-UCL PMID:15304507 NCBI chr  X:122,111,608...122,125,714
Ensembl chr  X:122,111,434...122,125,506
JBrowse link
mitochondrial ATP synthesis coupled proton transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP5F1A ATP synthase F1 subunit alpha involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chr 7:45,118,188...45,127,048
Ensembl chr 7:45,117,657...45,127,048
JBrowse link
G ATP5F1B ATP synthase F1 subunit beta involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr10:870,405...876,937
Ensembl chr10:870,392...909,161
JBrowse link
G ATP5F1C ATP synthase F1 subunit gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:28,306,857...28,325,149
Ensembl chr 2:28,306,857...28,325,116
JBrowse link
G ATP5F1D ATP synthase F1 subunit delta involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:57,547,575...57,550,110
Ensembl chr20:57,547,371...57,549,722
JBrowse link
G ATP5F1E ATP synthase F1 subunit epsilon involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:43,770,646...43,772,278
Ensembl chr24:43,772,120...43,772,680
JBrowse link
G ATP5ME ATP synthase membrane subunit e involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chr  X:108,285,208...108,285,423 JBrowse link
G ATP5MG ATP synthase membrane subunit g involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chr 5:15,329,060...15,336,344 JBrowse link
G ATP5PF ATP synthase peripheral stalk subunit F6 involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chr31:21,207,080...21,212,220
Ensembl chr31:21,200,337...21,215,975
JBrowse link
G ATP5PO ATP synthase peripheral stalk subunit OSCP involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr31:28,472,106...28,481,759 JBrowse link
G LOC100688796 ATP synthase F(0) complex subunit B1, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:63,940,486...63,954,982
Ensembl chr 6:40,613,415...40,625,979
Ensembl chr 6:40,613,415...40,625,979
JBrowse link
G LOC102151342 ATP synthase subunit d, mitochondrial-like involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chr 7:66,856,651...66,857,162 JBrowse link
G LOC102151856 ATP synthase subunit f, mitochondrial involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:49,438,852...49,439,253 JBrowse link
G LOC608048 ATP synthase subunit f, mitochondrial-like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:20,074,509...20,074,936 JBrowse link
G MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 involved_in ISO (PMID:12110673) UniProt PMID:12110673 NCBI chr MT:7,964...8,644
Ensembl chr MT:7,964...8,644
JBrowse link
G MT-ATP8 mitochondrially encoded ATP synthase membrane subunit 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr MT:7,803...8,006
Ensembl chr MT:7,803...8,006
JBrowse link
G PTGES3 prostaglandin E synthase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:885,744...903,814
Ensembl chr10:870,392...909,161
JBrowse link
G STOML2 stomatin like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:51,675,963...51,679,313
Ensembl chr11:51,675,963...51,679,199
JBrowse link
mitochondrial electron transport, cytochrome c to oxygen term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFG1L AFG1 like ATPase involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:65,312,922...65,516,207
Ensembl chr12:65,313,140...65,515,992
JBrowse link
G COX4I1 cytochrome c oxidase subunit 4I1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:66,883,730...66,891,734
Ensembl chr 5:66,883,732...66,891,500
JBrowse link
G COX4I2 cytochrome c oxidase subunit 4I2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr24:21,122,033...21,128,368
Ensembl chr24:21,120,213...21,128,320
JBrowse link
G COX5B cytochrome c oxidase subunit 5B involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:44,979,654...44,991,620
Ensembl chr10:44,979,654...44,991,703
JBrowse link
G CYCS cytochrome c, somatic involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:10980192 PMID:21873635 RGD:2300408 NCBI chr14:38,579,446...38,581,983
Ensembl chr14:38,579,446...38,581,983
JBrowse link
G GATC glutamyl-tRNA amidotransferase subunit C involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr26:16,352,826...16,362,298 JBrowse link
G MT-CO1 mitochondrially encoded cytochrome c oxidase I involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr MT:5,349...6,893
Ensembl chr MT:5,349...6,893
JBrowse link
G MT-CO3 mitochondrially encoded cytochrome c oxidase III involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr MT:8,644...9,427
Ensembl chr MT:8,644...9,427
JBrowse link
mitochondrial electron transport, NADH to ubiquinone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BDNF brain derived neurotrophic factor ISO RGD PMID:15341590 RGD:1358393 NCBI chr21:48,191,580...48,243,699
Ensembl chr21:48,192,670...48,204,480
JBrowse link
G COQ9 coenzyme Q9 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5468078|PMID:23255162) Ensembl
MGI
PMID:23255162 GO_REF:0000107 MGI:5468078 NCBI chr 2:58,964,221...58,977,589
Ensembl chr 2:58,964,318...58,977,573
JBrowse link
G DLD dihydrolipoamide dehydrogenase acts_upstream_of_or_within ISO (MGI:3622835|PMID:15009635) MGI PMID:15009635 MGI:3622835 NCBI chr18:12,703,340...12,734,408
Ensembl chr18:12,703,341...12,734,479
JBrowse link
G LOC100684565 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6 pseudogene involved_in IEA InterPro GO_REF:0000002 NCBI chr22:3,525,991...3,526,519 JBrowse link
G MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr MT:2,747...3,702
Ensembl chr MT:2,747...3,703
JBrowse link
G MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr MT:3,914...4,955
Ensembl chr MT:3,914...4,957
JBrowse link
G MT-ND3 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 3 involved_in ISS UniProt GO_REF:0000024 NCBI chr MT:9,496...9,841
Ensembl chr MT:9,496...9,842
JBrowse link
G MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 involved_in ISS UniProt GO_REF:0000024 NCBI chr MT:10,201...11,578
Ensembl chr MT:10,201...11,578
JBrowse link
G MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr MT:11,778...13,598
Ensembl chr MT:11,778...13,598
JBrowse link
G MT-ND6 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6 involved_in ISS UniProt GO_REF:0000024 NCBI chr MT:13,582...14,109
Ensembl chr MT:13,582...14,109
JBrowse link
G NDUFA10 NADH:ubiquinone oxidoreductase subunit A10 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5568152|PMID:24652937) Ensembl
MGI
PMID:24652937 GO_REF:0000107 MGI:5568152 NCBI chr25:49,920,748...49,968,966
Ensembl chr25:49,920,894...49,968,901
JBrowse link
G NDUFA7 NADH:ubiquinone oxidoreductase subunit A7 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:52,892,784...52,902,007 JBrowse link
G NDUFA8 NADH:ubiquinone oxidoreductase subunit A8 involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:60,404,486...60,418,234
Ensembl chr 9:60,404,379...60,418,236
JBrowse link
G NDUFAF1 NADH:ubiquinone oxidoreductase complex assembly factor 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr30:8,436,301...8,452,239
Ensembl chr30:8,423,315...8,452,113
JBrowse link
G NDUFB6 NADH:ubiquinone oxidoreductase subunit B6 involved_in IEA InterPro GO_REF:0000002 NCBI chr11:49,821,998...49,833,624
Ensembl chr22:3,526,115...3,526,501
JBrowse link
G NDUFB8 NADH:ubiquinone oxidoreductase subunit B8 involved_in IEA InterPro GO_REF:0000002 NCBI chr28:13,249,067...13,253,670
Ensembl chr28:13,249,070...13,253,619
JBrowse link
G NDUFB9 NADH:ubiquinone oxidoreductase subunit B9 involved_in IEA InterPro GO_REF:0000002 NCBI chr13:22,624,929...22,632,310
Ensembl chr13:22,624,945...22,632,310
JBrowse link
G NDUFC2 NADH:ubiquinone oxidoreductase subunit C2 involved_in IEA InterPro GO_REF:0000002 NCBI chr21:20,748,452...20,758,236 JBrowse link
G NDUFS1 NADH:ubiquinone oxidoreductase core subunit S1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:14,680,908...14,713,838
Ensembl chr37:14,683,083...14,713,754
JBrowse link
G NDUFS2 NADH:ubiquinone oxidoreductase core subunit S2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr38:21,271,603...21,281,140
Ensembl chr38:21,271,675...21,285,279
JBrowse link
G NDUFS3 NADH:ubiquinone oxidoreductase core subunit S3 involved_in ISO (PMID:14729820), (PMID:30140060)
(MGI:6391555|PMID:31916679), (MGI:6505357|PMID:33148885)
UniProt PMID:14729820 PMID:30140060 PMID:31916679 PMID:33148885 MGI:6391555 MGI:6505357 NCBI chr18:42,069,402...42,075,843
Ensembl chr18:42,069,398...42,076,921
JBrowse link
G NDUFS6 NADH:ubiquinone oxidoreductase subunit S6 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr34:10,989,857...10,999,232
Ensembl chr34:10,989,828...11,001,053
JBrowse link
G NDUFS7 NADH:ubiquinone oxidoreductase core subunit S7 involved_in ISO (PMID:17275378) UniProt PMID:17275378 NCBI chr20:57,443,264...57,448,892
Ensembl chr20:57,443,258...57,448,825
JBrowse link
G NDUFS8 NADH:ubiquinone oxidoreductase core subunit S8 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:49,796,558...49,800,805
Ensembl chr18:49,796,560...49,799,979
JBrowse link
G NDUFV1 NADH:ubiquinone oxidoreductase core subunit V1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:49,882,844...49,888,448
Ensembl chr18:49,882,907...49,888,434
JBrowse link
G NDUFV2 NADH:ubiquinone oxidoreductase core subunit V2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:75,150,293...75,184,084
Ensembl chr 7:75,150,415...75,184,067
JBrowse link
mitochondrial electron transport, succinate to ubiquinone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SDHA succinate dehydrogenase complex flavoprotein subunit A involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr34:11,935,684...11,965,094
Ensembl chr34:11,935,941...11,965,189
JBrowse link
G SDHAF2 succinate dehydrogenase complex assembly factor 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:54,970,987...54,986,676
Ensembl chr18:54,971,658...54,987,394
JBrowse link
G SDHC succinate dehydrogenase complex subunit C involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr38:21,162,850...21,200,429
Ensembl chr38:21,162,421...21,200,333
JBrowse link
mitochondrial electron transport, ubiquinol to cytochrome c term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYC1 cytochrome c1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:37,590,919...37,593,239
Ensembl chr13:37,590,912...37,593,156
JBrowse link
G CYCS cytochrome c, somatic involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:38,579,446...38,581,983
Ensembl chr14:38,579,446...38,581,983
JBrowse link
G MT-CYB mitochondrially encoded cytochrome b involved_in ISO (PMID:22690928) UniProt PMID:22690928 NCBI chr MT:14,183...15,322
Ensembl chr MT:14,183...15,322
JBrowse link
G UQCC3 ubiquinol-cytochrome c reductase complex assembly factor 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:53,984,203...53,985,496
Ensembl chr18:53,984,771...53,985,422
JBrowse link
G UQCR10 ubiquinol-cytochrome c reductase, complex III subunit X involved_in IEA InterPro GO_REF:0000002 NCBI chr26:22,953,336...22,955,569
Ensembl chr26:22,953,331...22,955,569
JBrowse link
G UQCRC1 ubiquinol-cytochrome c reductase core protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3640022|PMID:16782889) Ensembl
MGI
PMID:16782889 GO_REF:0000107 MGI:3640022 NCBI chr20:40,507,767...40,515,854
Ensembl chr20:40,506,907...40,520,110
JBrowse link
G UQCRH ubiquinol-cytochrome c reductase hinge protein involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:14,082,954...14,092,690 JBrowse link
G UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:21,148,964...21,150,573
Ensembl chr11:21,149,061...21,150,572
JBrowse link
negative regulation of cellular respiration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FLCN folliculin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:42,176,093...42,195,718
Ensembl chr 5:42,176,291...42,195,711
JBrowse link
G TRAP1 TNF receptor associated protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:37,544,929...37,596,789
Ensembl chr 6:37,544,580...37,597,427
JBrowse link
negative regulation of mitochondrial electron transport, NADH to ubiquinone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNAJC15 DnaJ heat shock protein family (Hsp40) member C15 acts_upstream_of_or_within ISO (MGI:5529421|PMID:23530063) MGI PMID:23530063 MGI:5529421 NCBI chr22:7,746,726...7,825,635 JBrowse link
negative regulation of oxidative phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN3 actinin alpha 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:50,787,353...50,801,036
Ensembl chr18:50,787,353...50,801,197
JBrowse link
G APOC3 apolipoprotein C3 ISO RGD PMID:11177239 RGD:1599177 NCBI chr 5:16,744,423...16,746,992
Ensembl chr 5:16,744,423...16,746,992
JBrowse link
G MLXIPL MLX interacting protein like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:6,617,398...6,652,201
Ensembl chr 6:6,633,231...6,652,198
JBrowse link
G PDE12 phosphodiesterase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:32,884,819...32,890,995
Ensembl chr20:32,886,972...32,890,890
JBrowse link
G PDE2A phosphodiesterase 2A involved_in ISO (MGI:5294502|PMID:21724846) UniProt PMID:21724846 MGI:5294502 NCBI chr21:25,542,030...25,635,661
Ensembl chr21:25,542,268...25,635,660
JBrowse link
G PPIF peptidylprolyl isomerase F involved_in ISO (MGI:5487522|PMID:21281446) UniProt PMID:21281446 MGI:5487522 NCBI chr 4:29,074,806...29,080,487 JBrowse link
G RHOA ras homolog family member A involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:39,824,552...39,888,089
Ensembl chr20:39,824,575...39,887,215
JBrowse link
G TNF tumor necrosis factor ISO RGD PMID:8903396 RGD:14995471 NCBI chr12:1,074,561...1,076,425
Ensembl chr12:1,074,552...1,076,425
JBrowse link
oxidative phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK2 adenylate kinase 2 ISO RGD PMID:18423391 RGD:5147997 NCBI chr 2:68,342,769...68,371,769
Ensembl chr 2:68,350,057...68,371,090
JBrowse link
G CHCHD10 coiled-coil-helix-coiled-coil-helix domain containing 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:28,742,466...28,744,370
Ensembl chr26:28,742,526...28,744,369
JBrowse link
G COX5A cytochrome c oxidase subunit Va involved_in IEA UniProt GO_REF:0000041 NCBI chr30:37,955,203...37,968,111
Ensembl chr30:37,905,827...37,968,111
JBrowse link
G COX6A2 cytochrome c oxidase subunit 6A2 involved_in IEA UniProt GO_REF:0000041 NCBI chr 6:16,807,094...16,807,763
Ensembl chr 6:16,807,150...16,809,998
JBrowse link
G COX7A1 cytochrome c oxidase subunit 7A1 involved_in IEA UniProt GO_REF:0000041 NCBI chr 1:116,547,179...116,548,917
Ensembl chr 1:116,547,282...116,548,917
JBrowse link
G COX7B2 cytochrome c oxidase subunit VIIb2 involved_in IEA UniProt GO_REF:0000041 NCBI chr13:42,739,856...42,831,878
Ensembl chr13:42,739,976...42,740,221
JBrowse link
G COX8A cytochrome c oxidase subunit VIIIA (ubiquitous) involved_in IEA UniProt GO_REF:0000041 NCBI chr18:53,048,902...53,050,528
Ensembl chr18:53,048,902...53,050,528
JBrowse link
G FXN frataxin involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3708076|PMID:17404227)
(MGI:3611157|PMID:16278235)
Ensembl
MGI
PMID:16278235 PMID:17404227 GO_REF:0000107 MGI:3611157 MGI:3708076 NCBI chr 1:88,288,566...88,311,228
Ensembl chr 1:88,288,566...88,311,228
JBrowse link
G LOC100684983 cytochrome c oxidase subunit 7B, mitochondrial involved_in IEA UniProt GO_REF:0000041 NCBI chr  X:60,192,698...60,197,547 JBrowse link
G LOC102151754 cytochrome c oxidase subunit 7C, mitochondrial-like involved_in IEA UniProt GO_REF:0000041 NCBI chr32:34,438,005...34,438,278 JBrowse link
G LOC102153059 cytochrome c oxidase subunit 7C, mitochondrial-like involved_in IEA UniProt GO_REF:0000041 NCBI chr25:19,598,982...19,599,216 JBrowse link
G LOC102155410 cytochrome c oxidase subunit 7C, mitochondrial involved_in IEA UniProt GO_REF:0000041 NCBI chr21:20,841,405...20,841,878 JBrowse link
G LOC106558390 cytochrome c oxidase subunit 8A, mitochondrial-like involved_in IEA UniProt GO_REF:0000041 NCBI chr  X:57,372,341...57,372,535 JBrowse link
G LOC606860 cytochrome c oxidase subunit 6C involved_in IEA UniProt GO_REF:0000041 NCBI chr13:1,835,897...1,852,413 JBrowse link
G LOC609990 cytochrome c oxidase subunit 7C, mitochondrial involved_in IEA UniProt GO_REF:0000041 NCBI chr 3:21,702,029...21,705,403 JBrowse link
G MSH2 mutS homolog 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3640229|PMID:16805809) Ensembl
MGI
PMID:16805809 GO_REF:0000107 MGI:3640229 NCBI chr10:49,517,448...49,594,001
Ensembl chr10:49,517,369...49,594,210
JBrowse link
G NIPSNAP2 nipsnap homolog 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:451,568...485,354
Ensembl chr 6:451,562...484,695
JBrowse link
G SURF1 SURF1 cytochrome c oxidase assembly factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:49,786,562...49,790,004
Ensembl chr 9:49,786,085...49,790,148
JBrowse link
G TEFM transcription elongation factor, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:40,860,850...40,868,020
Ensembl chr 9:40,860,938...40,868,020
JBrowse link
plasma membrane ATP synthesis coupled electron transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G COA6 cytochrome c oxidase assembly factor 6 involved_in ISO (PMID:26160915) UniProt PMID:26160915 NCBI chr 4:5,447,252...5,454,500
Ensembl chr 4:5,447,249...5,454,456
JBrowse link
positive regulation of cellular respiration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CHCHD4 coiled-coil-helix-coiled-coil-helix domain containing 4 acts_upstream_of_or_within ISO (MGI:5516376|PMID:24101517) MGI PMID:24101517 MGI:5516376 NCBI chr20:4,268,670...4,281,624
Ensembl chr20:4,267,683...4,281,549
JBrowse link
G CYCS cytochrome c, somatic ISO RGD PMID:21410437 RGD:7349317 NCBI chr14:38,579,446...38,581,983
Ensembl chr14:38,579,446...38,581,983
JBrowse link
G IFNAR1 interferon alpha and beta receptor subunit 1 involved_in ISO (PMID:25930096) ARUK-UCL PMID:25930096 NCBI chr31:28,854,765...28,876,399 JBrowse link
G IFNG interferon gamma involved_in ISO (MGI:6304699|PMID:29061364) ARUK-UCL PMID:29061364 MGI:6304699 NCBI chr10:10,406,866...10,411,698
Ensembl chr10:10,406,867...10,411,698
JBrowse link
G IFNLR1 interferon lambda receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:75,431,842...75,447,917
Ensembl chr 2:75,437,617...75,444,768
JBrowse link
G IL10RB interleukin 10 receptor subunit beta involved_in ISO (PMID:25930096) ARUK-UCL PMID:25930096 NCBI chr31:28,791,541...28,815,163
Ensembl chr31:27,892,394...27,915,637
JBrowse link
G IL4 interleukin 4 involved_in ISO (MGI:6304699|PMID:29061364) ARUK-UCL PMID:29061364 MGI:6304699 NCBI chr11:20,972,693...20,981,539
Ensembl chr11:20,972,690...20,981,534
JBrowse link
G MFN2 mitofusin 2 ISO mitochondrial function RGD PMID:25147362 RGD:13204807 NCBI chr 2:84,284,719...84,310,715
Ensembl chr 2:84,284,719...84,308,225
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:22842522 RGD:7207891 NCBI chr13:25,200,772...25,205,309
Ensembl chr13:25,200,577...25,205,309
JBrowse link
G OAS1 2'-5'-oligoadenylate synthetase 1 involved_in ISO (PMID:31817188) ARUK-UCL PMID:31817188 NCBI chr26:10,385,393...10,396,734
Ensembl chr26:10,385,447...10,396,733
JBrowse link
G OPN3 opsin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:32,995,047...33,040,873
Ensembl chr 7:32,996,938...33,040,876
JBrowse link
G PPARGC1A PPARG coactivator 1 alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:85,645,942...86,284,570
Ensembl chr 3:86,016,140...86,281,269
JBrowse link
G PRELID1 PRELI domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:36,051,562...36,055,080
Ensembl chr 4:36,051,879...36,055,043
JBrowse link
positive regulation of mitochondrial ATP synthesis coupled electron transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CCNB1 cyclin B1 involved_in ISO (PMID:24746669) CAFA PMID:24746669 NCBI chr 2:54,256,957...54,264,749 JBrowse link
G CDK1 cyclin dependent kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:12,884,106...12,899,203
Ensembl chr 4:12,883,385...12,899,197
JBrowse link
G CHCHD2 coiled-coil-helix-coiled-coil-helix domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:581,276...585,367
Ensembl chr 6:581,280...585,301
JBrowse link
positive regulation of mitochondrial electron transport, NADH to ubiquinone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ISCU iron-sulfur cluster assembly enzyme involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:18,300,800...18,307,668
Ensembl chr26:18,300,803...18,307,652
JBrowse link
G PARK7 Parkinsonism associated deglycase involved_in ISO (PMID:19822128)
(MGI:5582165|PMID:19822128)
ParkinsonsUK-UCL PMID:19822128 MGI:5582165 NCBI chr 5:61,576,219...61,592,325
Ensembl chr 5:61,576,069...61,592,303
JBrowse link
G PINK1 PTEN induced kinase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5568152|PMID:24652937) Ensembl
MGI
PMID:24652937 GO_REF:0000107 MGI:5568152 NCBI chr 2:78,276,091...78,293,761
Ensembl chr 2:78,277,077...78,294,123
JBrowse link
positive regulation of oxidative phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GADD45GIP1 GADD45G interacting protein 1 acts_upstream_of_or_within ISO (MGI:5648685|PMID:25883318) MGI PMID:25883318 MGI:5648685 NCBI chr20:49,241,956...49,243,838
Ensembl chr20:49,241,962...49,243,837
JBrowse link
G LEXM lymphocyte expansion molecule acts_upstream_of_or_within ISO (MGI:5648685|PMID:25883318) MGI PMID:25883318 MGI:5648685 NCBI chr 5:54,330,982...54,356,524
Ensembl chr 5:54,330,322...54,357,409
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:18414044 RGD:10059611 NCBI chr13:25,200,772...25,205,309
Ensembl chr13:25,200,577...25,205,309
JBrowse link
G MYOG myogenin ISO RGD PMID:10225962 RGD:9686132 NCBI chr 7:112,116...114,604
Ensembl chr 7:112,034...113,892
JBrowse link
G NUPR1 nuclear protein 1, transcriptional regulator involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:18,222,367...18,224,015
Ensembl chr 6:18,222,515...18,224,014
JBrowse link
G VCP valosin containing protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:51,636,986...51,651,749
Ensembl chr11:51,637,411...51,651,714
JBrowse link
regulation of aerobic respiration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACTN3 actinin alpha 3 involved_in ISO (MGI:3759354|PMID:17828264) UniProt PMID:17828264 MGI:3759354 NCBI chr18:50,787,353...50,801,036
Ensembl chr18:50,787,353...50,801,197
JBrowse link
G AKT1 AKT serine/threonine kinase 1 ISO RGD PMID:24601882 RGD:39128160 NCBI chr 8:72,317,399...72,335,686
Ensembl chr 8:72,317,869...72,335,193
JBrowse link
G BNIP3 BCL2 interacting protein 3 involved_in ISO (MGI:3796473|PMID:18281291) ParkinsonsUK-UCL PMID:18281291 MGI:3796473 NCBI chr28:40,037,681...40,050,499
Ensembl chr28:40,038,643...40,049,797
JBrowse link
G CBFA2T3 CBFA2/RUNX1 partner transcriptional co-repressor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:64,432,291...64,518,905
Ensembl chr 5:64,431,843...64,519,528
JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:36,614,045...36,656,692
Ensembl chr 8:36,614,045...36,656,692
JBrowse link
G IDE insulin degrading enzyme involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:6,844,480...6,967,713
Ensembl chr28:6,844,055...6,967,713
JBrowse link
G LOC100856786 glycolipid transfer protein involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:17,262,008...17,283,735
Ensembl chr26:17,262,100...17,330,165
JBrowse link
G NOP53 NOP53 ribosome biogenesis factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:108,307,039...108,315,732
Ensembl chr 1:108,307,042...108,316,495
JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 involved_in ISO (MGI:6148506|PMID:29323231)
(PMID:29364879), (PMID:29452640)
UniProt PMID:29323231 PMID:29364879 PMID:29452640 MGI:6148506 NCBI chr10:1,357,347...1,362,511
Ensembl chr10:1,356,706...1,362,305
JBrowse link
G TRPV4 transient receptor potential cation channel subfamily V member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:17,293,334...17,330,156
Ensembl chr26:17,262,100...17,330,165
JBrowse link
G VCP valosin containing protein involved_in ISO (PMID:23498975) ParkinsonsUK-UCL PMID:23498975 NCBI chr11:51,636,986...51,651,749
Ensembl chr11:51,637,411...51,651,714
JBrowse link
regulation of cellular respiration term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CISD1 CDGSH iron sulfur domain 1 acts_upstream_of_or_within ISO (MGI:3703929|PMID:17376863) MGI PMID:17376863 MGI:3703929
G NOA1 nitric oxide associated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:49,078,509...49,091,427
Ensembl chr13:49,078,361...49,090,864
JBrowse link
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5582991|PMID:24691033) Ensembl
MGI
PMID:24691033 GO_REF:0000107 MGI:5582991 NCBI chr34:12,600,140...12,681,905
Ensembl chr34:12,600,233...12,675,910
JBrowse link
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:56,478,771...56,520,992
Ensembl chr10:56,478,680...56,520,967
JBrowse link
G PRDM16 PR/SET domain 16 involved_in ISO (MGI:3770355|PMID:17618855), (MGI:4365360|PMID:18483224) UniProt PMID:17618855 PMID:18483224 MGI:3770355 MGI:4365360 NCBI chr 5:57,805,951...58,018,817
Ensembl chr 5:57,730,370...58,017,976
JBrowse link
G PRKACA protein kinase cAMP-activated catalytic subunit alpha ISO RGD PMID:12562968 RGD:1580676 NCBI chr20:48,416,730...48,425,237
Ensembl chr20:48,409,045...48,426,669
JBrowse link
G SLC25A23 solute carrier family 25 member 23 acts_upstream_of_or_within ISO (MGI:5490167|PMID:23344948) MGI PMID:23344948 MGI:5490167 NCBI chr20:53,722,841...53,736,205
Ensembl chr20:53,722,320...53,733,331
JBrowse link
G TREX1 three prime repair exonuclease 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5829115|PMID:28069950) Ensembl
MGI
PMID:28069950 GO_REF:0000107 MGI:5829115 NCBI chr20:40,624,845...40,626,840
Ensembl chr20:40,624,891...40,626,906
JBrowse link
regulation of mitochondrial ATP synthesis coupled proton transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATPSCKMT ATP synthase c subunit lysine N-methyltransferase involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr34:4,049,015...4,242,294
Ensembl chr34:4,049,126...4,067,333
JBrowse link
G DNAJC30 DnaJ heat shock protein family (Hsp40) member C30 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:6,595,233...6,596,440
Ensembl chr 6:6,595,294...6,595,974
JBrowse link
regulation of oxidative phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCD1 ATP binding cassette subfamily D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:121,545,690...121,564,117
Ensembl chr  X:121,545,586...121,563,186
JBrowse link
G AK4 adenylate kinase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:45,055,294...45,119,595
Ensembl chr 5:44,884,283...45,120,203
JBrowse link
G ATP7A ATPase copper transporting alpha acts_upstream_of_or_within ISO (MGI:78039|PMID:8550574) MGI PMID:8550574 MGI:78039 NCBI chr  X:60,203,336...60,356,525
Ensembl chr  X:60,203,270...60,352,869
JBrowse link
G COX7A2L cytochrome c oxidase subunit 7A2 like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:33,954,882...33,976,749
Ensembl chr17:33,955,118...33,976,699
JBrowse link
G MYC MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:22629444 RGD:7240532 NCBI chr13:25,200,772...25,205,309
Ensembl chr13:25,200,577...25,205,309
JBrowse link
G PINK1 PTEN induced kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:78,276,091...78,293,761
Ensembl chr 2:78,277,077...78,294,123
JBrowse link
G SHMT2 serine hydroxymethyltransferase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:1,357,347...1,362,511
Ensembl chr10:1,356,706...1,362,305
JBrowse link
G SLC25A23 solute carrier family 25 member 23 acts_upstream_of_or_within ISO (MGI:5490167|PMID:23344948) MGI PMID:23344948 MGI:5490167 NCBI chr20:53,722,841...53,736,205
Ensembl chr20:53,722,320...53,733,331
JBrowse link
G SLC25A33 solute carrier family 25 member 33 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:62,790,116...62,825,644
Ensembl chr 5:62,790,157...62,825,388
JBrowse link
G UQCC2 ubiquinol-cytochrome c reductase complex assembly factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:3,050,329...3,063,831
Ensembl chr12:3,050,329...3,063,801
JBrowse link
respiratory electron transport chain term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AIFM2 apoptosis inducing factor mitochondria associated 2 involved_in IEA GOC GO_REF:0000108 NCBI chr 4:21,086,778...21,104,127
Ensembl chr 4:21,087,339...21,104,172
JBrowse link
G COQ7 coenzyme Q7, hydroxylase acts_upstream_of_or_within ISO (MGI:2154595|PMID:11585841), (MGI:4359329|PMID:19478076) MGI PMID:11585841 PMID:19478076 MGI:2154595 MGI:4359329 NCBI chr 6:25,912,936...25,922,123
Ensembl chr 6:25,912,954...25,929,655
JBrowse link
G ETFDH electron transfer flavoprotein dehydrogenase involved_in IEA GOC GO_REF:0000108 NCBI chr15:55,752,170...55,781,118
Ensembl chr15:55,752,200...55,792,105
JBrowse link
G ETFRF1 electron transfer flavoprotein regulatory factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:22,296,949...22,303,772
Ensembl chr27:22,297,418...22,303,221
JBrowse link
G GBA glucosylceramidase beta acts_upstream_of_or_within
involved_in
ISO
IEA
(MGI:5501380|PMID:23707074) MGI
Ensembl
PMID:23707074 GO_REF:0000107 MGI:5501380 NCBI chr 7:42,317,704...42,322,285
Ensembl chr 7:42,317,862...42,322,864
JBrowse link
G IMMP2L inner mitochondrial membrane peptidase subunit 2 acts_upstream_of_or_within ISO (MGI:5299279|PMID:21824519) MGI PMID:21824519 MGI:5299279 NCBI chr14:50,487,679...51,336,906 JBrowse link
G MT-CO1 mitochondrially encoded cytochrome c oxidase I involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr MT:5,349...6,893
Ensembl chr MT:5,349...6,893
JBrowse link
G MT-CYB mitochondrially encoded cytochrome b involved_in IEA InterPro GO_REF:0000002 NCBI chr MT:14,183...15,322
Ensembl chr MT:14,183...15,322
JBrowse link
G MYBBP1A MYB binding protein 1a involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3032469|PMID:14744933) Ensembl
MGI
PMID:14744933 GO_REF:0000107 MGI:3032469 NCBI chr 5:30,528,141...30,538,815
Ensembl chr 5:30,526,720...30,539,483
JBrowse link
G NDUFA5 NADH:ubiquinone oxidoreductase subunit A5 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
(PMID:21873635)
(MGI:5548237|PMID:24154540)
GO_Central
MGI
InterPro
PMID:21873635 PMID:24154540 GO_REF:0000002 MGI:5548237 NCBI chr14:11,995,862...12,008,257 JBrowse link
G NDUFS4 NADH:ubiquinone oxidoreductase subunit S4 acts_upstream_of_or_within ISO (MGI:6277626|PMID:30391276) MGI PMID:30391276 MGI:6277626 NCBI chr 4:61,613,580...61,727,219
Ensembl chr 4:61,613,589...61,727,205
JBrowse link
G NDUFS6 NADH:ubiquinone oxidoreductase subunit S6 acts_upstream_of_or_within ISO (MGI:5319010|PMID:22474353) MGI PMID:22474353 MGI:5319010 NCBI chr34:10,989,857...10,999,232
Ensembl chr34:10,989,828...11,001,053
JBrowse link
G PINK1 PTEN induced kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:78,276,091...78,293,761
Ensembl chr 2:78,277,077...78,294,123
JBrowse link
G PLEC plectin involved_in ISO (MGI:5660667|PMID:26019234) MGI PMID:26019234 MGI:5660667 NCBI chr13:37,449,379...37,503,752
Ensembl chr13:37,450,248...37,513,523
JBrowse link
G POLG2 DNA polymerase gamma 2, accessory subunit involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5465384|PMID:23197651) Ensembl
MGI
PMID:23197651 GO_REF:0000107 MGI:5465384 NCBI chr 9:12,258,188...12,298,376
Ensembl chr 9:12,269,990...12,298,272
JBrowse link
G PPARGC1A PPARG coactivator 1 alpha involved_in
acts_upstream_of_or_within
IEA
ISO
ISS
(MGI:3032469|PMID:14744933) Ensembl
MGI
UniProt
PMID:14744933 GO_REF:0000024 GO_REF:0000107 MGI:3032469 NCBI chr 3:85,645,942...86,284,570
Ensembl chr 3:86,016,140...86,281,269
JBrowse link
G SCO2 synthesis of cytochrome C oxidase 2 acts_upstream_of_or_within ISO (MGI:4412318|PMID:19837698) MGI PMID:19837698 MGI:4412318 NCBI chr10:16,783,116...16,790,011
Ensembl chr10:16,788,287...16,790,247
JBrowse link
G SDHA succinate dehydrogenase complex flavoprotein subunit A involved_in ISO (PMID:7550341) RGD
UniProt
PMID:7550341 PMID:16520240 RGD:2306906 NCBI chr34:11,935,684...11,965,094
Ensembl chr34:11,935,941...11,965,189
JBrowse link
G SDHB succinate dehydrogenase complex iron sulfur subunit B involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:16520240 PMID:21873635 RGD:2306906 NCBI chr 2:81,158,291...81,190,110
Ensembl chr 2:81,158,291...81,190,109
JBrowse link
G SOD2 superoxide dismutase 2 acts_upstream_of_or_within ISO (MGI:1931647|PMID:11226230), (MGI:4359329|PMID:19478076) MGI PMID:11226230 PMID:19478076 MGI:1931647 MGI:4359329 NCBI chr 1:48,943,472...48,955,158
Ensembl chr 1:48,836,262...48,955,706
JBrowse link
G UQCRFS1 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:122,035,193...122,038,032
Ensembl chr 1:122,035,197...122,037,759
JBrowse link
tricarboxylic acid cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACO1 aconitase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:49,699,072...49,758,783
Ensembl chr11:49,699,109...49,923,257
JBrowse link
G ACO2 aconitase 2 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
(PMID:21873635)
(PMID:9630632)
GO_Central
MGI
RGD
UniProt
PMID:9630632 PMID:9712727 PMID:21873635 GO_REF:0000041 RGD:2306877 NCBI chr10:23,742,284...23,798,580
Ensembl chr10:23,742,333...23,798,498
JBrowse link
G CS citrate synthase involved_in IBA
ISO
IEA
(PMID:21873635) GO_Central
RGD
UniProt
PMID:938457 PMID:9712727 PMID:21873635 GO_REF:0000041 RGD:2306828 RGD:2306877 NCBI chr10:584,000...611,351
Ensembl chr10:584,904...611,436
JBrowse link
G DHTKD1 dehydrogenase E1 and transketolase domain containing 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:24,298,323...24,349,848
Ensembl chr 2:24,299,789...24,349,899
JBrowse link
G DLST dihydrolipoamide S-succinyltransferase involved_in IEA UniProt GO_REF:0000041 NCBI chr 8:48,003,730...48,025,001
Ensembl chr 8:48,002,211...48,024,999
JBrowse link
G FH fumarate hydratase involved_in IBA
ISO
IEA
(PMID:21873635) GO_Central
RGD
UniProt
PMID:938457 PMID:21873635 GO_REF:0000041 RGD:2306828 NCBI chr 7:32,900,250...32,927,436
Ensembl chr 7:32,901,586...32,927,412
JBrowse link
G IDH1 isocitrate dehydrogenase (NADP(+)) 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr37:16,512,027...16,531,269
Ensembl chr37:16,512,770...16,531,219
JBrowse link
G IDH2 isocitrate dehydrogenase (NADP(+)) 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:53,070,462...53,077,566
Ensembl chr 3:53,070,695...53,087,496
JBrowse link
G IDH3A isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha involved_in IEA
ISO
UniProt
RGD
PMID:938457 GO_REF:0000043 GO_REF:0000104 RGD:2306828 NCBI chr 3:58,301,982...58,318,925
Ensembl chr 3:58,302,001...58,318,248
JBrowse link
G IDH3B isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta involved_in IEA
ISO
IBA
(PMID:21873635) UniProt
RGD
GO_Central
PMID:938457 PMID:21873635 GO_REF:0000104 RGD:2306828 NCBI chr24:18,556,437...18,561,399
Ensembl chr24:18,556,508...18,561,391
JBrowse link
G IDH3G isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma involved_in IEA
ISO
IBA
(PMID:21873635) UniProt
RGD
GO_Central
PMID:938457 PMID:21873635 GO_REF:0000104 RGD:2306828 NCBI chr  X:121,599,368...121,608,707
Ensembl chr  X:121,599,368...121,608,643
JBrowse link
G IREB2 iron responsive element binding protein 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:38,398,445...38,441,128
Ensembl chr13:38,400,591...38,441,015
JBrowse link
G LOC608210 succinate dehydrogenase complex, subunit B, iron sulfur (Ip) pseudogene involved_in IEA UniProt GO_REF:0000041 NCBI chr14:5,358,874...5,359,861 JBrowse link
G MDH1 malate dehydrogenase 1 involved_in IEA
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000043 NCBI chr10:63,316,818...63,334,556
Ensembl chr10:63,316,831...63,361,735
JBrowse link
G MDH2 malate dehydrogenase 2 involved_in IEA
ISO
IBA
(PMID:21873635) InterPro
RGD
GO_Central
UniProt
PMID:938457 PMID:21873635 GO_REF:0000002 GO_REF:0000043 RGD:2306828 NCBI chr 6:7,389,266...7,405,311 JBrowse link
G OGDH oxoglutarate dehydrogenase involved_in IEA
ISO
IBA
(PMID:21873635) InterPro
RGD
GO_Central
PMID:9712727 PMID:21873635 GO_REF:0000002 RGD:2306877
G OGDHL oxoglutarate dehydrogenase L involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr28:1,573,653...1,600,264
Ensembl chr28:1,573,793...1,596,285
JBrowse link
G PDHA1 pyruvate dehydrogenase E1 subunit alpha 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr  X:15,338,364...15,354,011
Ensembl chr  X:15,338,202...15,387,458
JBrowse link
G SDHA succinate dehydrogenase complex flavoprotein subunit A involved_in IEA UniProt GO_REF:0000041 NCBI chr34:11,935,684...11,965,094
Ensembl chr34:11,935,941...11,965,189
JBrowse link
G SDHAF2 succinate dehydrogenase complex assembly factor 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:54,970,987...54,986,676
Ensembl chr18:54,971,658...54,987,394
JBrowse link
G SDHB succinate dehydrogenase complex iron sulfur subunit B involved_in IEA UniProt GO_REF:0000041 NCBI chr 2:81,158,291...81,190,110
Ensembl chr 2:81,158,291...81,190,109
JBrowse link
G SDHC succinate dehydrogenase complex subunit C involved_in IEA InterPro GO_REF:0000002 NCBI chr38:21,162,850...21,200,429
Ensembl chr38:21,162,421...21,200,333
JBrowse link
G SDHD succinate dehydrogenase complex subunit D involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:21,030,295...21,041,125 JBrowse link
G SUCLA2 succinate-CoA ligase ADP-forming subunit beta involved_in IEA
ISO
UniProt
RGD
PMID:17403370 GO_REF:0000041 RGD:2306915 NCBI chr22:3,440,908...3,478,683
Ensembl chr22:3,440,923...3,478,683
JBrowse link
G SUCLG1 succinate-CoA ligase GDP/ADP-forming subunit alpha involved_in IEA
ISO
IBA
(PMID:21873635) UniProt
RGD
GO_Central
PMID:17403370 PMID:21873635 GO_REF:0000041 RGD:2306915 NCBI chr17:40,392,969...40,424,875
Ensembl chr17:40,393,178...40,424,711
JBrowse link
G SUCLG2 succinate-CoA ligase GDP-forming subunit beta involved_in IBA
ISO
IEA
(PMID:21873635) GO_Central
RGD
UniProt
PMID:17403370 PMID:21873635 GO_REF:0000041 RGD:2306915 NCBI chr20:23,915,149...24,167,740
Ensembl chr20:23,895,802...24,182,869
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16215
    cellular process 15535
      cellular metabolic process 9557
        generation of precursor metabolites and energy 446
          energy derivation by oxidation of organic compounds 302
            cellular respiration 214
              aerobic respiration + 164
              anaerobic respiration + 0
              negative regulation of cellular respiration + 11
              positive regulation of cellular respiration + 21
              regulation of cellular respiration + 55
              respiratory electron transport chain + 82
paths to the root