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ONTOLOGY REPORT - ANNOTATIONS


Term:carnitine biosynthetic process
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Accession:GO:0045329 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of carnitine (hydroxy-trimethyl aminobutyric acid), a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane.
Synonyms:exact_synonym: carnitine anabolism;   carnitine biosynthesis;   carnitine formation;   carnitine synthesis;   vitamin Bt biosynthesis;   vitamin Bt biosynthetic process


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carnitine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACADM acyl-CoA dehydrogenase medium chain involved_in ISO (PMID:16972171) BHF-UCL PMID:16972171 NCBI chr 6:137,541,481...137,575,544
Ensembl chr 6:137,541,380...137,595,108
JBrowse link
G ALDH9A1 aldehyde dehydrogenase 9 family member A1 involved_in IEA UniProt GO_REF:0000041 NCBI chr 4:85,029,914...85,057,650 JBrowse link
G BBOX1 gamma-butyrobetaine hydroxylase 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000041 NCBI chr 2:33,227,965...33,296,013
Ensembl chr 2:33,227,974...33,296,559
JBrowse link
G TMLHE trimethyllysine hydroxylase, epsilon involved_in IBA
ISO
IEA
(PMID:21873635)
(MGI:2183690|PMID:12121276)
GO_Central
MGI
UniProt
PMID:12121276 PMID:21873635 GO_REF:0000041 MGI:2183690 NCBI chr  X:125,601,920...125,673,716
Ensembl chr  X:125,598,105...125,673,680
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16538
    metabolic process 10434
      cellular metabolic process 9521
        cellular modified amino acid metabolic process 175
          amino-acid betaine metabolic process 16
            amino-acid betaine biosynthetic process 4
              carnitine biosynthetic process 4
Path 2
Term Annotations click to browse term
  biological_process 16538
    metabolic process 10434
      organic substance metabolic process 9984
        organonitrogen compound metabolic process 5953
          organonitrogen compound biosynthetic process 1476
            cellular modified amino acid biosynthetic process 35
              amino-acid betaine biosynthetic process 4
                carnitine biosynthetic process 4
paths to the root