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ONTOLOGY REPORT - ANNOTATIONS


Term:carnitine biosynthetic process
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Accession:GO:0045329 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of carnitine (hydroxy-trimethyl aminobutyric acid), a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane.
Synonyms:exact_synonym: carnitine anabolism;   carnitine biosynthesis;   carnitine formation;   carnitine synthesis;   vitamin Bt biosynthesis;   vitamin Bt biosynthetic process


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carnitine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadm acyl-Coenzyme A dehydrogenase, medium chain involved_in ISO (PMID:16972171) MGI
BHF-UCL
PMID:16972171 GO_REF:0000096 MGI:4834177 NCBI chr 3:153,922,353...153,944,643
Ensembl chr 3:153,922,357...153,944,632
JBrowse link
G Bbox1 butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase) involved_in IBA
ISO
(MGI:6201960|PMID:21873635)
(PMID:20599753), (PMID:9753662)
GO_Central
UniProt
MGI
PMID:9753662 PMID:20599753 PMID:21873635 GO_REF:0000096 MGI:4834177 MGI:6201960 NCBI chr 2:110,264,056...110,314,813
Ensembl chr 2:110,262,697...110,314,560
JBrowse link
G Tmlhe trimethyllysine hydroxylase, epsilon involved_in IBA
IDA
ISO
(MGI:6201960|PMID:21873635)
(MGI:2183690|PMID:12121276)
(PMID:23092983)
(PMID:15754339)
GO_Central
MGI
UniProt
BHF-UCL
PMID:12121276 PMID:15754339 PMID:21873635 PMID:23092983 GO_REF:0000096 MGI:2183690 MGI:4834177 MGI:6201960

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 23334
    metabolic process 11117
      cellular metabolic process 10049
        cellular modified amino acid metabolic process 175
          amino-acid betaine metabolic process 17
            amino-acid betaine biosynthetic process 4
              carnitine biosynthetic process 3
Path 2
Term Annotations click to browse term
  biological_process 23334
    metabolic process 11117
      organic substance metabolic process 10682
        organonitrogen compound metabolic process 6073
          organonitrogen compound biosynthetic process 1510
            cellular modified amino acid biosynthetic process 40
              amino-acid betaine biosynthetic process 4
                carnitine biosynthetic process 3
paths to the root