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ONTOLOGY REPORT - ANNOTATIONS


Term:carnitine biosynthetic process
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Accession:GO:0045329 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of carnitine (hydroxy-trimethyl aminobutyric acid), a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane.
Synonyms:exact_synonym: carnitine anabolism;   carnitine biosynthesis;   carnitine formation;   carnitine synthesis;   vitamin Bt biosynthesis;   vitamin Bt biosynthetic process


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carnitine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadm acyl-CoA dehydrogenase medium chain involved_in ISO (PMID:16972171) BHF-UCL PMID:16972171 NCBI chrNW_004955423:17,173,648...17,199,189
Ensembl chrNW_004955423:17,172,779...17,199,090
JBrowse link
G Bbox1 gamma-butyrobetaine hydroxylase 1 involved_in ISO (PMID:20599753), (PMID:9753662) UniProt PMID:9753662 PMID:20599753 NCBI chrNW_004955476:6,368,842...6,433,797
Ensembl chrNW_004955476:6,368,842...6,433,797
JBrowse link
G Tmlhe trimethyllysine hydroxylase, epsilon involved_in ISO (MGI:2183690|PMID:12121276)
(PMID:15754339)
(PMID:23092983)
MGI
BHF-UCL
UniProt
PMID:12121276 PMID:15754339 PMID:23092983 MGI:2183690 NCBI chrNW_004955594:272,668...329,997
Ensembl chrNW_004955594:272,646...331,757
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 11940
    metabolic process 7559
      cellular metabolic process 6963
        cellular modified amino acid metabolic process 127
          amino-acid betaine metabolic process 13
            amino-acid betaine biosynthetic process 3
              carnitine biosynthetic process 3
Path 2
Term Annotations click to browse term
  biological_process 11940
    metabolic process 7559
      organic substance metabolic process 7262
        organonitrogen compound metabolic process 4310
          organonitrogen compound biosynthetic process 1018
            cellular modified amino acid biosynthetic process 30
              amino-acid betaine biosynthetic process 3
                carnitine biosynthetic process 3
paths to the root