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ONTOLOGY REPORT - ANNOTATIONS

Term:unmethylated CpG binding
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Accession:GO:0045322 term browser browse the term
Definition:Binding to uan nmethylated CpG motif. Unmethylated CpG dinucleotides are often associated with gene promoters.


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unmethylated CpG binding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxxc1 CXXC finger protein 1 enables ISO (PMID:10688657) RGD PMID:10688657 NCBI chr18:67,813,185...67,818,556
Ensembl chr18:67,813,206...67,818,551 		JBrowse link
G Dnmt3a DNA methyltransferase 3 alpha enables ISO (PMID:29414941) RGD PMID:29414941 NCBI chr 6:26,791,517...26,902,161
Ensembl chr 6:26,822,609...26,896,687 		JBrowse link
G Fbxl19 F-box and leucine-rich repeat protein 19 enables ISO (PMID:29276034) RGD PMID:29276034 NCBI chr 1:182,356,899...182,380,839
Ensembl chr 1:182,360,830...182,380,083 		JBrowse link
G Kdm2a lysine demethylase 2A enables ISO (PMID:29276034)
(PMID:20417597)		 RGD PMID:20417597 PMID:29276034 NCBI chr 1:201,612,427...201,682,359
Ensembl chr 1:201,612,453...201,680,787 		JBrowse link
G Kdm2b lysine demethylase 2B enables ISO (PMID:29276034) RGD PMID:29276034 NCBI chr12:33,566,530...33,701,366
Ensembl chr12:33,574,657...33,701,355 		JBrowse link
G Kmt2a lysine methyltransferase 2A enables ISO (PMID:16990798), (PMID:20010842), (PMID:29276034) RGD PMID:16990798 PMID:20010842 PMID:29276034 NCBI chr 8:45,116,763...45,193,320
Ensembl chr 8:45,118,814...45,193,181 		JBrowse link
G Kmt2b lysine methyltransferase 2B enables ISO (PMID:29276034) RGD PMID:29276034 NCBI chr 1:85,821,700...85,840,987
Ensembl chr 1:85,821,753...85,841,326 		JBrowse link
G Mbd1 methyl-CpG binding domain protein 1 enables ISO (PMID:29276034) RGD PMID:29276034 NCBI chr18:67,869,870...67,884,501
Ensembl chr18:67,869,992...67,886,554 		JBrowse link
G Mecp2 methyl CpG binding protein 2 IDA RGD PMID:16314321 RGD:1601323 NCBI chr  X:151,781,177...151,844,687
Ensembl chr  X:151,789,930...151,844,689 		JBrowse link
G Tlr9 toll-like receptor 9 IDA ODN2006 - a synthetic oligonucleotide containing unmethylated CpG dinucleotides RGD PMID:16973131 RGD:1643119 NCBI chr 8:106,864,680...106,868,796
Ensembl chr 8:106,864,680...106,868,796 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 21010
    binding 18037
      organic cyclic compound binding 6372
        nucleic acid binding 4081
          DNA binding 2375
            sequence-specific DNA binding 1580
              unmethylated CpG binding 10
paths to the root