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ONTOLOGY REPORT - ANNOTATIONS

Term:external encapsulating structure organization
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Accession:GO:0045229 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of external structures that lie outside the plasma membrane and surround the entire cell.
Synonyms:exact_synonym: external encapsulating structure organisation;   external encapsulating structure organization and biogenesis


show annotations for term's descendants           Sort by:
basement membrane assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb1 laminin B1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr12:31,315,230...31,379,643
Ensembl chr12:31,315,233...31,379,643 		JBrowse link
G Lamb2 laminin, beta 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:108,357,080...108,367,729
Ensembl chr 9:108,356,935...108,367,729 		JBrowse link
G Lamb3 laminin, beta 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:192,976,661...193,026,186
Ensembl chr 1:192,890,007...193,026,186 		JBrowse link
G Ntn4 netrin 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:93,476,911...93,581,834
Ensembl chr10:93,476,543...93,583,069 		JBrowse link
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 acts_upstream_of_or_within IMP (PMID:16467571) MGI PMID:16467571 NCBI chr 5:137,015,873...137,025,500
Ensembl chr 5:137,015,873...137,025,502 		JBrowse link
G Pxdn peroxidasin involved_in
acts_upstream_of		 IMP
ISO
IDA		 (MGI:6109597|PMID:25708780), (MGI:6444560|PMID:32571911)
(MGI:6870970|PMID:22842973)		 UniProt
MGI		 PMID:22842973 PMID:25708780 PMID:32571911 GO_REF:0000119 MGI:4834177 MGI:6109597 MGI:6444560 MGI:6870970 NCBI chr12:29,986,641...30,067,657
Ensembl chr12:29,987,607...30,067,657 		JBrowse link
G Ramp2 receptor (calcitonin) activity modifying protein 2 involved_in IMP (MGI:3772552|PMID:18097473) UniProt PMID:18097473 MGI:3772552 NCBI chr11:101,137,160...101,139,076
Ensembl chr11:101,136,854...101,150,372 		JBrowse link
basement membrane disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cma1 chymase 1, mast cell involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:56,178,908...56,182,132
Ensembl chr14:56,178,908...56,182,132 		JBrowse link
G Ctss cathepsin S involved_in IMP
ISO		 (MGI:5553237|PMID:22952693) BHF-UCL
MGI		 PMID:22952693 GO_REF:0000119 MGI:4834177 MGI:5553237 NCBI chr 3:95,434,097...95,463,716
Ensembl chr 3:95,434,097...95,463,714 		JBrowse link
G Hpn hepsin involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 7:30,798,150...30,814,751
Ensembl chr 7:30,798,150...30,814,715 		JBrowse link
basement membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav1 caveolin 1, caveolae protein acts_upstream_of_or_within IMP (PMID:11884617) MGI PMID:11884617 NCBI chr 6:17,306,387...17,341,323
Ensembl chr 6:17,306,334...17,341,451 		JBrowse link
G Cav2 caveolin 2 acts_upstream_of_or_within IMP (PMID:11884617) MGI PMID:11884617 NCBI chr 6:17,281,184...17,289,129
Ensembl chr 6:17,281,184...17,289,114 		JBrowse link
G Col3a1 collagen, type III, alpha 1 involved_in IMP (PMID:22235340) MGI PMID:22235340 NCBI chr 1:45,350,698...45,388,866
Ensembl chr 1:45,350,698...45,388,866 		JBrowse link
G Col4a1 collagen, type IV, alpha 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:11,248,423...11,362,889
Ensembl chr 8:11,248,423...11,362,826 		JBrowse link
G Col6a1 collagen, type VI, alpha 1 acts_upstream_of_or_within IMP (PMID:25158062) MGI PMID:25158062 NCBI chr10:76,544,626...76,561,869
Ensembl chr10:76,544,626...76,562,002 		JBrowse link
G Dag1 dystroglycan 1 acts_upstream_of_or_within IMP (PMID:23217742) MGI PMID:23217742 NCBI chr 9:108,082,060...108,141,176
Ensembl chr 9:108,081,833...108,141,157 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within IMP (PMID:26024086) MGI PMID:26024086 NCBI chr15:52,931,657...53,209,579
Ensembl chr15:52,927,434...53,209,555 		JBrowse link
G Fermt1 fermitin family member 1 involved_in IMP (MGI:5571208|PMID:24681597) CAFA PMID:24681597 MGI:5571208 NCBI chr 2:132,746,097...132,787,956
Ensembl chr 2:132,746,309...132,787,826 		JBrowse link
G Fkrp fukutin related protein acts_upstream_of_or_within IMP (PMID:28039900) MGI PMID:28039900 NCBI chr 7:16,543,192...16,550,657
Ensembl chr 7:16,543,171...16,550,657 		JBrowse link
G Fktn fukutin acts_upstream_of_or_within IMP (PMID:29360985) MGI PMID:29360985 NCBI chr 4:53,713,745...53,765,785
Ensembl chr 4:53,713,998...53,777,890 		JBrowse link
G Flrt2 fibronectin leucine rich transmembrane protein 2 involved_in IMP (MGI:4950310|PMID:21350012) UniProt PMID:21350012 MGI:4950310 NCBI chr12:95,658,780...95,751,989
Ensembl chr12:95,659,000...95,751,989 		JBrowse link
G Fshr follicle stimulating hormone receptor acts_upstream_of_or_within IMP (PMID:9811848) MGI PMID:9811848 NCBI chr17:89,292,380...89,508,103
Ensembl chr17:89,292,380...89,508,103 		JBrowse link
G Gas2 growth arrest specific 2 acts_upstream_of_or_within IMP (PMID:27734842) MGI PMID:27734842 NCBI chr 7:51,511,560...51,644,753
Ensembl chr 7:51,511,763...51,644,723 		JBrowse link
G Hmcn1 hemicentin 1 involved_in IMP (MGI:6762317|PMID:34504132) UniProt PMID:34504132 MGI:6762317 NCBI chr 1:150,438,251...150,869,568
Ensembl chr 1:150,438,275...150,869,186 		JBrowse link
G Itgb1 integrin beta 1 (fibronectin receptor beta) involved_in IMP (MGI:5571208|PMID:24681597) CAFA PMID:24681597 MGI:5571208 NCBI chr 8:129,412,135...129,460,060
Ensembl chr 8:129,412,135...129,459,681 		JBrowse link
G Large1 LARGE xylosyl- and glucuronyltransferase 1 acts_upstream_of_or_within IMP (PMID:12140558), (PMID:21970971) MGI PMID:12140558 PMID:21970971 NCBI chr 8:73,541,227...74,080,164
Ensembl chr 8:73,541,227...74,080,168 		JBrowse link
G Mmp11 matrix metallopeptidase 11 acts_upstream_of_or_within IMP (PMID:18622425) MGI PMID:18622425 NCBI chr10:75,759,056...75,768,336
Ensembl chr10:75,759,056...75,772,330 		JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within IMP (PMID:16436605) MGI PMID:16436605 NCBI chr11:63,019,808...63,050,373
Ensembl chr11:63,019,808...63,050,373 		JBrowse link
G Pomgnt1 protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase acts_upstream_of_or_within IMP (PMID:21970971) MGI PMID:21970971 NCBI chr 4:116,007,700...116,017,041
Ensembl chr 4:115,981,037...116,017,046 		JBrowse link
G Pomt2 protein-O-mannosyltransferase 2 acts_upstream_of_or_within IMP (PMID:21970971) MGI PMID:21970971 NCBI chr12:87,153,635...87,194,742
Ensembl chr12:87,153,635...87,194,742 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IMP (PMID:33144400) MGI PMID:33144400 NCBI chr15:93,396,992...93,494,147
Ensembl chr15:93,396,995...93,493,772 		JBrowse link
G Pxdn peroxidasin involved_in IMP (MGI:5584206|PMID:24895407), (MGI:6114330|PMID:28424209) UniProt PMID:24895407 PMID:28424209 MGI:5584206 MGI:6114330 NCBI chr12:29,986,641...30,067,657
Ensembl chr12:29,987,607...30,067,657 		JBrowse link
G Ric8a RIC8 guanine nucleotide exchange factor A acts_upstream_of_or_within IMP (PMID:21069829) MGI PMID:21069829 NCBI chr 7:140,437,310...140,443,644
Ensembl chr 7:140,436,870...140,444,285 		JBrowse link
G Spint2 serine protease inhibitor, Kunitz type 2 acts_upstream_of_or_within IMP (PMID:19592578) MGI PMID:19592578 NCBI chr 7:28,955,755...28,981,484
Ensembl chr 7:28,955,748...28,981,337 		JBrowse link
G Tfap2a transcription factor AP-2, alpha acts_upstream_of_or_within IMP (PMID:16186342) MGI PMID:16186342 NCBI chr13:40,867,278...40,891,715
Ensembl chr13:40,868,778...40,891,852 		JBrowse link
biofilm matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctsg cathepsin G involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:56,337,342...56,340,031
Ensembl chr14:56,337,338...56,340,031 		JBrowse link
cell envelope organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hrnr hornerin involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 3:93,227,056...93,240,879
Ensembl chr 3:93,227,056...93,240,877 		JBrowse link
collagen fibril organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acan aggrecan acts_upstream_of_or_within IMP (PMID:3070812) MGI PMID:3070812 NCBI chr 7:78,702,974...78,764,847
Ensembl chr 7:78,703,231...78,764,847 		JBrowse link
G Adamts12 ADAM metallopeptidase with thrombospondin type 1 motif 12 involved_in IGI (PMID:29618652) MGI PMID:29618652 NCBI chr15:11,064,781...11,349,321
Ensembl chr15:11,064,876...11,349,317 		JBrowse link
G Adamts14 ADAM metallopeptidase with thrombospondin type 1 motif 14 acts_upstream_of_or_within IDA (PMID:11741898) MGI PMID:11741898 NCBI chr10:61,032,886...61,109,447
Ensembl chr10:61,032,891...61,109,217 		JBrowse link
G Adamts2 ADAM metallopeptidase with thrombospondin type 1 motif 2 acts_upstream_of_or_within IMP (PMID:16556917) MGI PMID:16556917 NCBI chr11:50,492,912...50,698,400
Ensembl chr11:50,492,911...50,698,400 		JBrowse link
G Adamts7 ADAM metallopeptidase with thrombospondin type 1 motif 7 involved_in IGI (PMID:29618652) MGI PMID:29618652 NCBI chr 9:90,041,420...90,082,155
Ensembl chr 9:90,045,122...90,090,124 		JBrowse link
G Antxr2 anthrax toxin receptor 2 acts_upstream_of_or_within IMP
IGI		 (PMID:28604699) MGI PMID:28604699 NCBI chr 5:98,032,547...98,178,876
Ensembl chr 5:98,030,642...98,178,902 		JBrowse link
G Anxa2 annexin A2 acts_upstream_of_or_within IMP (PMID:14702107) MGI PMID:14702107 NCBI chr 9:69,360,978...69,399,074
Ensembl chr 9:69,360,902...69,399,077 		JBrowse link
G Atp7a ATPase, Cu++ transporting, alpha polypeptide acts_upstream_of_or_within IMP (PMID:4808708)
(PMID:16338116)
(PMID:8096378)
(PMID:20889), (PMID:8895222)		 MGI PMID:20889 PMID:4808708 PMID:8096378 PMID:8895222 PMID:16338116 NCBI chr  X:105,070,830...105,171,766
Ensembl chr  X:105,070,882...105,168,532 		JBrowse link
G Col11a1 collagen, type XI, alpha 1 acts_upstream_of_or_within IGI
IMP		 (PMID:17029294), (PMID:21467034)
(PMID:17029294), (PMID:17683922), (PMID:21467034), (PMID:3070812), (PMID:4100752), (PMID:4110409), (PMID:7859283)		 MGI PMID:3070812 PMID:4100752 PMID:4110409 PMID:7859283 PMID:17029294 More... NCBI chr 3:113,823,933...114,014,405
Ensembl chr 3:113,824,189...114,014,367 		JBrowse link
G Col11a2 collagen, type XI, alpha 2 involved_in
acts_upstream_of_or_within		 ISO
IBA
IMP		 (PMID:10581026), (PMID:11668593) MGI
GO_Central		 PMID:10581026 PMID:11668593 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr17:34,257,462...34,285,659
Ensembl chr17:34,258,411...34,285,659 		JBrowse link
G Col14a1 collagen, type XIV, alpha 1 acts_upstream_of_or_within IMP (PMID:22906538) MGI PMID:22906538 NCBI chr15:55,171,040...55,384,199
Ensembl chr15:55,171,146...55,384,199 		JBrowse link
G Col18a1 collagen, type XVIII, alpha 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:76,888,013...77,002,351
Ensembl chr10:76,888,012...77,002,382 		JBrowse link
G Col1a1 collagen, type I, alpha 1 involved_in NAS
ISO		 (MGI:6869963|PMID:1916105) ComplexPortal
MGI		 PMID:1916105 GO_REF:0000119 MGI:4834177 MGI:6869963 NCBI chr11:94,827,050...94,843,868
Ensembl chr11:94,827,050...94,843,868 		JBrowse link
G Col1a2 collagen, type I, alpha 2 involved_in NAS
ISO		 (MGI:6869963|PMID:1916105) ComplexPortal
MGI		 PMID:1916105 GO_REF:0000119 MGI:4834177 MGI:6869963 NCBI chr 6:4,505,618...4,541,543
Ensembl chr 6:4,504,814...4,541,544 		JBrowse link
G Col27a1 collagen, type XXVII, alpha 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:63,132,246...63,253,228
Ensembl chr 4:63,132,241...63,253,228 		JBrowse link
G Col28a1 collagen, type XXVIII, alpha 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:7,997,100...8,193,709
Ensembl chr 6:7,997,808...8,192,617 		JBrowse link
G Col2a1 collagen, type II, alpha 1 involved_in
acts_upstream_of_or_within		 ISO
IBA
IMP		 (PMID:11171689), (PMID:7590256), (PMID:9832566), (PMID:9915573)
(PMID:3070812), (PMID:7276808), (PMID:8989518)
(PMID:9022054)		 MGI
GO_Central		 PMID:3070812 PMID:7276808 PMID:7590256 PMID:8989518 PMID:9022054 More... GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr15:97,873,483...97,902,525
Ensembl chr15:97,873,483...97,902,576 		JBrowse link
G Col3a1 collagen, type III, alpha 1 involved_in
acts_upstream_of_or_within		 ISO
IMP		 (PMID:24820199)
(PMID:20587693), (PMID:31655293)
(PMID:29551664)
(PMID:9050868)		 MGI PMID:9050868 PMID:20587693 PMID:24820199 PMID:29551664 PMID:31655293 GO_REF:0000119 MGI:4834177 NCBI chr 1:45,350,698...45,388,866
Ensembl chr 1:45,350,698...45,388,866 		JBrowse link
G Col5a1 collagen, type V, alpha 1 involved_in
acts_upstream_of_or_within		 ISO
IMP
IGI
IBA		 (PMID:15383546), (PMID:16492673), (PMID:17029294)
(PMID:17029294), (PMID:21467034)		 MGI
GO_Central		 PMID:15383546 PMID:16492673 PMID:17029294 PMID:21467034 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 2:27,776,393...27,929,522
Ensembl chr 2:27,776,437...27,929,526 		JBrowse link
G Col5a2 collagen, type V, alpha 2 involved_in IMP
ISO		 (MGI:3047505|PMID:15199158) UniProt
MGI		 PMID:15199158 GO_REF:0000119 MGI:3047505 MGI:4834177 NCBI chr 1:45,413,491...45,542,442
Ensembl chr 1:45,413,481...45,542,442 		JBrowse link
G Col6a1 collagen, type VI, alpha 1 acts_upstream_of_or_within IMP
IGI		 (PMID:25158062)
(PMID:28604699)		 MGI PMID:25158062 PMID:28604699 NCBI chr10:76,544,626...76,561,869
Ensembl chr10:76,544,626...76,562,002 		JBrowse link
G Comp cartilage oligomeric matrix protein acts_upstream_of_or_within IMP (PMID:26746240)
(PMID:24312420)
(PMID:19808781)		 MGI PMID:19808781 PMID:24312420 PMID:26746240 NCBI chr 8:70,826,186...70,834,721
Ensembl chr 8:70,826,208...70,834,716 		JBrowse link
G Crtap cartilage associated protein involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:114,204,204...114,219,743
Ensembl chr 9:114,204,202...114,219,743 		JBrowse link
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 involved_in IMP (MGI:5544856|PMID:23979599) UniProt PMID:23979599 MGI:5544856 NCBI chr17:80,014,369...80,022,490
Ensembl chr17:80,008,966...80,022,490 		JBrowse link
G Ddr2 discoidin domain receptor family, member 2 involved_in IMP (MGI:5318020|PMID:19900459) UniProt PMID:19900459 MGI:5318020 NCBI chr 1:169,799,874...169,938,525
Ensembl chr 1:169,799,876...169,938,331 		JBrowse link
G Dpt dermatopontin involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:12230512), (PMID:16877395) GO_Central
MGI		 PMID:12230512 PMID:16877395 GO_REF:0000033 NCBI chr 1:164,624,232...164,651,843
Ensembl chr 1:164,624,213...164,651,835 		JBrowse link
G Ero1a endoplasmic reticulum oxidoreductase 1 alpha acts_upstream_of_or_within IMP (PMID:28106121) MGI PMID:28106121 NCBI chr14:45,520,544...45,556,029
Ensembl chr14:45,520,544...45,556,228 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within IMP (PMID:19850926) MGI PMID:19850926 NCBI chr15:52,931,657...53,209,579
Ensembl chr15:52,927,434...53,209,555 		JBrowse link
G Fkbp10 FK506 binding protein 10 acts_upstream_of_or_within IMP (PMID:24777781)
(PMID:28206698)		 MGI PMID:24777781 PMID:28206698 NCBI chr11:100,306,520...100,315,666
Ensembl chr11:100,306,523...100,315,650 		JBrowse link
G Foxc1 forkhead box C1 acts_upstream_of_or_within IMP (PMID:10767326) MGI PMID:10767326 NCBI chr13:31,990,629...31,994,618
Ensembl chr13:31,990,616...31,996,459 		JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within IMP (PMID:10767326) MGI PMID:10767326 NCBI chr 8:121,842,910...121,845,634
Ensembl chr 8:121,842,910...121,845,634 		JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:113,579,020...113,588,993
Ensembl chr 2:113,576,509...113,588,991 		JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta acts_upstream_of_or_within IMP (PMID:10660670) MGI PMID:10660670 NCBI chr 2:33,450,977...33,531,219
Ensembl chr 2:33,450,977...33,530,620 		JBrowse link
G Lox lysyl oxidase involved_in
acts_upstream_of_or_within		 ISO
IBA
IMP		 (PMID:26700732) RGD
GO_Central
MGI		 PMID:16432278 PMID:16804742 PMID:26700732 GO_REF:0000033 GO_REF:0000096 MGI:4417868 RGD:1600668 RGD:1600669 NCBI chr18:52,649,132...52,662,939
Ensembl chr18:52,649,139...52,662,939 		JBrowse link
G Loxl1 lysyl oxidase-like 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:58,195,006...58,220,495
Ensembl chr 9:58,195,021...58,220,469 		JBrowse link
G Loxl2 lysyl oxidase-like 2 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr14:69,846,085...69,933,283
Ensembl chr14:69,846,517...69,933,283 		JBrowse link
G Loxl3 lysyl oxidase-like 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:83,011,186...83,029,547
Ensembl chr 6:83,011,154...83,029,543 		JBrowse link
G Loxl4 lysyl oxidase-like 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:42,580,718...42,601,326
Ensembl chr19:42,582,421...42,601,252 		JBrowse link
G Mia3 MIA SH3 domain ER export factor 3 acts_upstream_of_or_within IMP (PMID:21606205) MGI PMID:21606205 NCBI chr 1:183,107,091...183,151,091
Ensembl chr 1:183,107,682...183,150,894 		JBrowse link
G Mkx mohawk homeobox acts_upstream_of_or_within IMP (PMID:20696843) MGI PMID:20696843 NCBI chr18:6,934,966...7,004,779
Ensembl chr18:6,934,518...7,004,780 		JBrowse link
G Mmp11 matrix metallopeptidase 11 acts_upstream_of_or_within IMP (PMID:18622425) MGI PMID:18622425 NCBI chr10:75,759,056...75,768,336
Ensembl chr10:75,759,056...75,772,330 		JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of_or_within IMP (PMID:10383727) MGI PMID:10383727 NCBI chr11:79,223,541...79,472,435
Ensembl chr11:79,230,519...79,472,438 		JBrowse link
G Optc opticin involved_in IMP
IBA		 (MGI:6148629|PMID:29323130) UniProt
GO_Central		 PMID:29323130 GO_REF:0000033 MGI:6148629 NCBI chr 1:133,824,937...133,837,344
Ensembl chr 1:133,824,937...133,835,737 		JBrowse link
G P3h1 prolyl 3-hydroxylase 1 acts_upstream_of_or_within IMP (PMID:20363744) MGI PMID:20363744 NCBI chr 4:119,090,112...119,106,174
Ensembl chr 4:119,090,112...119,106,172 		JBrowse link
G P3h4 prolyl 3-hydroxylase family member 4 (non-enzymatic) involved_in IMP
IBA		 (MGI:5779580|PMID:27119146) UniProt
GO_Central		 PMID:27119146 GO_REF:0000033 MGI:5779580 NCBI chr11:100,299,293...100,305,542
Ensembl chr11:100,299,282...100,305,662 		JBrowse link
G P4ha1 procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide acts_upstream_of_or_within IMP (PMID:17135260) MGI PMID:17135260 NCBI chr10:59,159,019...59,209,126
Ensembl chr10:59,159,118...59,209,126 		JBrowse link
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 acts_upstream_of_or_within IMP (PMID:16467571) MGI PMID:16467571 NCBI chr 5:137,015,873...137,025,500
Ensembl chr 5:137,015,873...137,025,502 		JBrowse link
G Pxdn peroxidasin involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr12:29,986,641...30,067,657
Ensembl chr12:29,987,607...30,067,657 		JBrowse link
G Scx scleraxis scleraxis bHLH transcription factor involved_in IMP (MGI:4413438|PMID:18802027) UniProt PMID:18802027 MGI:4413438 NCBI chr15:76,341,594...76,343,668
Ensembl chr15:76,341,652...76,343,658 		JBrowse link
G Selenon selenoprotein N acts_upstream_of_or_within IMP (PMID:28106121) MGI PMID:28106121 NCBI chr 4:134,265,203...134,279,477
Ensembl chr 4:134,265,203...134,279,477 		JBrowse link
G Serpinf2 serine (or cysteine) peptidase inhibitor, clade F, member 2 involved_in IMP (MGI:5306295|PMID:17958745) BHF-UCL PMID:17958745 MGI:5306295 NCBI chr11:75,322,562...75,330,327
Ensembl chr11:75,322,558...75,330,417 		JBrowse link
G Serpinh1 serine (or cysteine) peptidase inhibitor, clade H, member 1 involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:10995453)
(PMID:22492985)		 GO_Central
MGI		 PMID:10995453 PMID:22492985 GO_REF:0000033 NCBI chr 7:98,994,583...99,002,321
Ensembl chr 7:98,994,583...99,002,446 		JBrowse link
G Sfrp2 secreted frizzled-related protein 2 acts_upstream_of_or_within IMP (PMID:19079247) MGI PMID:19079247 NCBI chr 3:83,673,628...83,681,621
Ensembl chr 3:83,673,628...83,681,623 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186 		JBrowse link
G Tgfbr1 transforming growth factor, beta receptor I acts_upstream_of_or_within IMP (PMID:15993878) MGI PMID:15993878 NCBI chr 4:47,353,258...47,414,926
Ensembl chr 4:47,353,222...47,414,931 		JBrowse link
G Tnxb tenascin XB acts_upstream_of_or_within IMP (PMID:15194424)
(PMID:11925569)		 MGI PMID:11925569 PMID:15194424 NCBI chr17:34,879,427...34,938,789
Ensembl chr17:34,879,431...34,938,789 		JBrowse link
G Vipas39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog acts_upstream_of_or_within IMP (PMID:27435297) MGI PMID:27435297 NCBI chr12:87,285,647...87,313,426
Ensembl chr12:87,285,642...87,313,030 		JBrowse link
G Vps33b vacuolar protein sorting 33B acts_upstream_of_or_within IMP (PMID:27435297) MGI PMID:27435297 NCBI chr 7:79,919,369...79,941,323
Ensembl chr 7:79,919,397...79,941,502 		JBrowse link
G Zfp469 zinc finger protein 469 acts_upstream_of_or_within IMP (PMID:34368841) MGI PMID:34368841 NCBI chr 8:122,770,009...122,999,389
Ensembl chr 8:122,985,359...122,999,389 		JBrowse link
elastic fiber assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp7a ATPase, Cu++ transporting, alpha polypeptide acts_upstream_of_or_within IMP (PMID:20889), (PMID:3385878), (PMID:937819)
(PMID:16338116)		 MGI PMID:20889 PMID:937819 PMID:3385878 PMID:16338116 NCBI chr  X:105,070,830...105,171,766
Ensembl chr  X:105,070,882...105,168,532 		JBrowse link
G Col3a1 collagen, type III, alpha 1 involved_in IMP (PMID:24820199) MGI PMID:24820199 NCBI chr 1:45,350,698...45,388,866
Ensembl chr 1:45,350,698...45,388,866 		JBrowse link
G Efemp2 epidermal growth factor-containing fibulin-like extracellular matrix protein 2 involved_in
acts_upstream_of_or_within		 IMP
ISO		 (MGI:3619755|PMID:16478991), (MGI:4947512|PMID:20019329), (MGI:5660411|PMID:26178373), (MGI:6140729|PMID:28508064), (MGI:6158865|PMID:26711913)
(PMID:19855011)		 UniProt
MGI		 PMID:16478991 PMID:19855011 PMID:20019329 PMID:26178373 PMID:26711913 More... GO_REF:0000119 MGI:3619755 MGI:4834177 MGI:4947512 MGI:5660411 MGI:6140729 MGI:6158865 NCBI chr19:5,523,974...5,532,548
Ensembl chr19:5,523,982...5,532,545 		JBrowse link
G Emilin1 elastin microfibril interfacer 1 involved_in IMP (MGI:5605894|PMID:25056700) BHF-UCL PMID:25056700 MGI:5605894 NCBI chr 5:31,070,729...31,078,623
Ensembl chr 5:31,070,746...31,078,621 		JBrowse link
G Fbln5 fibulin 5 involved_in IMP
IBA
ISO		 (MGI:2681470|PMID:11805835), (MGI:2681471|PMID:11805834) BHF-UCL
GO_Central
MGI		 PMID:11805834 PMID:11805835 GO_REF:0000033 GO_REF:0000119 MGI:2681470 MGI:2681471 MGI:4834177 NCBI chr12:101,712,820...101,785,541
Ensembl chr12:101,712,824...101,785,314 		JBrowse link
G Lox lysyl oxidase acts_upstream_of_or_within
involved_in		 ISO
IMP		 (PMID:12417550), (PMID:16192629)
(PMID:23413430)		 RGD
MGI		 PMID:12417550 PMID:16192629 PMID:16432278 PMID:23413430 GO_REF:0000096 MGI:4417868 RGD:1600669 NCBI chr18:52,649,132...52,662,939
Ensembl chr18:52,649,139...52,662,939 		JBrowse link
G Ltbp4 latent transforming growth factor beta binding protein 4 involved_in IMP (MGI:5638486|PMID:25713297) UniProt PMID:25713297 MGI:5638486 NCBI chr 7:27,004,566...27,039,142
Ensembl chr 7:27,004,561...27,037,117 		JBrowse link
G Mfap4 microfibrillar-associated protein 4 involved_in ISO
IBA		 MGI
GO_Central		 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr11:61,376,257...61,379,536
Ensembl chr11:61,376,257...61,379,726 		JBrowse link
G Myh11 myosin, heavy polypeptide 11, smooth muscle involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:14,012,392...14,109,227
Ensembl chr16:14,012,399...14,109,236 		JBrowse link
G Thsd4 thrombospondin, type I, domain containing 4 acts_upstream_of_or_within IDA (PMID:19940141) MGI PMID:19940141 NCBI chr 9:59,874,214...60,429,394
Ensembl chr 9:59,874,214...60,429,329 		JBrowse link
G Tnxb tenascin XB involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:34,879,427...34,938,789
Ensembl chr17:34,879,431...34,938,789 		JBrowse link
extracellular matrix assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col1a2 collagen, type I, alpha 2 acts_upstream_of_or_within IMP (PMID:22910579) MGI PMID:22910579 NCBI chr 6:4,505,618...4,541,543
Ensembl chr 6:4,504,814...4,541,544 		JBrowse link
G Col6a1 collagen, type VI, alpha 1 acts_upstream_of_or_within IMP (PMID:19114551) MGI PMID:19114551 NCBI chr10:76,544,626...76,561,869
Ensembl chr10:76,544,626...76,562,002 		JBrowse link
G Eln elastin involved_in IMP (MGI:5142190|PMID:20576933) BHF-UCL PMID:20576933 MGI:5142190 NCBI chr 5:134,731,449...134,776,300
Ensembl chr 5:134,731,447...134,776,177 		JBrowse link
G Fkbp10 FK506 binding protein 10 acts_upstream_of_or_within IMP (PMID:28774593) MGI PMID:28774593 NCBI chr11:100,306,520...100,315,666
Ensembl chr11:100,306,523...100,315,650 		JBrowse link
G Gas6 growth arrest specific 6 involved_in ISO PMID:18374201 UniProt PMID:18374201 RGD:8554638 NCBI chr 8:13,515,374...13,544,535
Ensembl chr 8:13,515,374...13,544,490 		JBrowse link
G Gpm6b glycoprotein m6b involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr  X:165,021,911...165,172,028
Ensembl chr  X:165,021,907...165,171,984 		JBrowse link
G Hapln2 hyaluronan and proteoglycan link protein 2 acts_upstream_of_or_within IMP (PMID:20181608) MGI PMID:20181608 NCBI chr 3:87,927,865...87,934,818
Ensembl chr 3:87,929,057...87,934,890 		JBrowse link
G Has1 hyaluronan synthase 1 involved_in IDA
IBA		 (MGI:5508296|PMID:10455188) UniProt
GO_Central		 PMID:10455188 GO_REF:0000033 MGI:5508296 NCBI chr17:18,063,588...18,075,450
Ensembl chr17:18,063,585...18,075,467 		JBrowse link
G Has2 hyaluronan synthase 2 involved_in IDA
IBA		 (MGI:5508296|PMID:10455188) UniProt
GO_Central		 PMID:10455188 GO_REF:0000033 MGI:5508296 NCBI chr15:56,529,023...56,557,942
Ensembl chr15:56,529,023...56,557,935 		JBrowse link
G Has3 hyaluronan synthase 3 involved_in IDA
IBA		 (MGI:5508296|PMID:10455188) UniProt
GO_Central		 PMID:10455188 GO_REF:0000033 MGI:5508296 NCBI chr 8:107,596,874...107,609,534
Ensembl chr 8:107,596,874...107,611,198 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IMP (PMID:19706528) MGI PMID:19706528 NCBI chr15:93,396,992...93,494,147
Ensembl chr15:93,396,995...93,493,772 		JBrowse link
G Qsox1 quiescin Q6 sulfhydryl oxidase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:155,653,901...155,688,645
Ensembl chr 1:155,651,775...155,688,635 		JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3, neutral acts_upstream_of_or_within IMP (PMID:22910579) MGI PMID:22910579 NCBI chr 8:106,979,180...107,064,597
Ensembl chr 8:106,979,180...107,064,620 		JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 acts_upstream_of IMP (PMID:20881014) MGI PMID:20881014 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in IDA
ISO		 (MGI:4820704|PMID:19734317) BHF-UCL
MGI		 PMID:19734317 GO_REF:0000119 MGI:4820704 MGI:4834177 NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502 		JBrowse link
extracellular matrix constituent secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccn2 cellular communication network factor 2 involved_in ISO positive regulation RGD
MGI		 PMID:18613219 GO_REF:0000096 MGI:4417868 RGD:2314619 NCBI chr10:24,471,340...24,474,581
Ensembl chr10:24,471,340...24,474,581 		JBrowse link
G Creb3l1 cAMP responsive element binding protein 3-like 1 involved_in IDA (MGI:4438316|PMID:19767743) UniProt PMID:19767743 MGI:4438316 NCBI chr 2:91,812,673...91,854,515
Ensembl chr 2:91,812,673...91,854,847 		JBrowse link
G Eng endoglin involved_in ISO RGD
MGI		 PMID:15539634 GO_REF:0000096 MGI:4417868 RGD:1601032 NCBI chr 2:32,536,607...32,572,681
Ensembl chr 2:32,536,607...32,572,681 		JBrowse link
G Tmem38b transmembrane protein 38B acts_upstream_of_or_within IMP (PMID:27188440) MGI PMID:27188440 NCBI chr 4:53,825,988...53,862,019
Ensembl chr 4:53,826,045...53,862,019 		JBrowse link
G Zfp469 zinc finger protein 469 acts_upstream_of_or_within IMP (PMID:34368841) MGI PMID:34368841 NCBI chr 8:122,770,009...122,999,389
Ensembl chr 8:122,985,359...122,999,389 		JBrowse link
extracellular matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts15 ADAM metallopeptidase with thrombospondin type 1 motif 15 involved_in IMP (MGI:6508502|PMID:23233679) UniProt PMID:23233679 MGI:6508502 NCBI chr 9:30,810,451...30,833,853
Ensembl chr 9:30,810,451...30,833,748 		JBrowse link
G Adamts5 ADAM metallopeptidase with thrombospondin type 1 motif 5 involved_in IMP (MGI:6508502|PMID:23233679) UniProt PMID:23233679 MGI:6508502 NCBI chr16:85,655,045...85,698,013
Ensembl chr16:85,653,061...85,698,716 		JBrowse link
G Capg capping actin protein, gelsolin like NOT|involved_in ISO (PMID:24236012) UniProt PMID:24236012 NCBI chr 6:72,515,265...72,539,966
Ensembl chr 6:72,521,374...72,539,966 		JBrowse link
G Cma1 chymase 1, mast cell involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:56,178,908...56,182,132
Ensembl chr14:56,178,908...56,182,132 		JBrowse link
G Eng endoglin involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:32,536,607...32,572,681
Ensembl chr 2:32,536,607...32,572,681 		JBrowse link
G Exoc8 exocyst complex component 8 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:125,617,038...125,624,444
Ensembl chr 8:125,619,847...125,624,444 		JBrowse link
G Flot1 flotillin 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:36,134,243...36,143,674
Ensembl chr17:36,134,122...36,143,683 		JBrowse link
G Gsn gelsolin NOT|involved_in ISO (PMID:24236012) UniProt PMID:24236012 NCBI chr 2:35,146,371...35,197,914
Ensembl chr 2:35,146,392...35,197,904 		JBrowse link
G Kif9 kinesin family member 9 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:110,306,062...110,354,242
Ensembl chr 9:110,306,026...110,354,247 		JBrowse link
G Klk4 kallikrein related-peptidase 4 (prostase, enamel matrix, prostate) acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:22243248) MGI
GO_Central		 PMID:22243248 GO_REF:0000033 NCBI chr 7:43,530,584...43,535,228
Ensembl chr 7:43,530,584...43,535,228 		JBrowse link
G Klk5 kallikrein related-peptidase 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:43,483,581...43,500,605
Ensembl chr 7:43,491,395...43,500,605 		JBrowse link
G Lamc1 laminin, gamma 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:153,094,668...153,208,532
Ensembl chr 1:153,094,668...153,208,532 		JBrowse link
G Lcp1 lymphocyte cytosolic protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:75,368,570...75,468,282
Ensembl chr14:75,368,541...75,468,282 		JBrowse link
G Mmp13 matrix metallopeptidase 13 involved_in IMP
ISO		 (MGI:3771509|PMID:17987127) UniProt
MGI		 PMID:17987127 GO_REF:0000119 MGI:3771509 MGI:4834177 NCBI chr 9:7,272,514...7,283,333
Ensembl chr 9:7,272,514...7,283,331 		JBrowse link
G Mmp20 matrix metallopeptidase 20 (enamelysin) acts_upstream_of_or_within IMP (PMID:22243248) MGI PMID:22243248 NCBI chr 9:7,628,232...7,674,969
Ensembl chr 9:7,628,232...7,674,980 		JBrowse link
G Noxo1 NADPH oxidase organizer 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:24,915,208...24,919,504
Ensembl chr17:24,915,208...24,919,503 		JBrowse link
G Pbxip1 pre B cell leukemia transcription factor interacting protein 1 acts_upstream_of_or_within IMP (PMID:30659184) MGI PMID:30659184 NCBI chr 3:89,343,982...89,358,259
Ensembl chr 3:89,344,013...89,358,259 		JBrowse link
G Plg plasminogen involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:12,597,496...12,638,271
Ensembl chr17:12,597,495...12,638,272 		JBrowse link
G Sh3pxd2b SH3 and PX domains 2B involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:32,297,777...32,378,189
Ensembl chr11:32,297,820...32,378,173 		JBrowse link
G Tpsab1 tryptase alpha/beta 1 involved_in ISO (PMID:27068509) BHF-UCL PMID:27068509 NCBI chr17:25,562,219...25,564,536
Ensembl chr17:25,562,212...25,564,541 		JBrowse link
G Washc1 WASH complex subunit 1 involved_in ISO (PMID:24344185) UniProt PMID:24344185 NCBI chr17:66,418,524...66,427,498
Ensembl chr17:66,418,540...66,427,498 		JBrowse link
G Wdr72 WD repeat domain 72 acts_upstream_of_or_within IMP (PMID:26247047) MGI PMID:26247047 NCBI chr 9:74,017,608...74,190,485
Ensembl chr 9:74,017,638...74,190,590 		JBrowse link
extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G 2300002M23Rik RIKEN cDNA 2300002M23 gene acts_upstream_of_or_within
involved_in		 IDA
IBA		 (PMID:18757743) MGI
GO_Central		 PMID:18757743 GO_REF:0000033 NCBI chr17:35,878,382...35,879,842
Ensembl chr17:35,878,347...35,879,849 		JBrowse link
G Abi3bp ABI family member 3 binding protein acts_upstream_of_or_within
involved_in		 IDA
IBA		 (PMID:18757743) MGI
GO_Central		 PMID:18757743 GO_REF:0000033 NCBI chr16:56,298,179...56,510,498
Ensembl chr16:56,298,241...56,510,498 		JBrowse link
G Adamts1 ADAM metallopeptidase with thrombospondin type 1 motif 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:85,590,715...85,600,001
Ensembl chr16:85,590,715...85,600,001 		JBrowse link
G Adamts10 ADAM metallopeptidase with thrombospondin type 1 motif 10 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:33,742,620...33,772,756
Ensembl chr17:33,743,178...33,772,756 		JBrowse link
G Adamts12 ADAM metallopeptidase with thrombospondin type 1 motif 12 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:11,064,781...11,349,321
Ensembl chr15:11,064,876...11,349,317 		JBrowse link
G Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif 13 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:26,863,363...26,899,638
Ensembl chr 2:26,863,428...26,899,640 		JBrowse link
G Adamts14 ADAM metallopeptidase with thrombospondin type 1 motif 14 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:61,032,886...61,109,447
Ensembl chr10:61,032,891...61,109,217 		JBrowse link
G Adamts15 ADAM metallopeptidase with thrombospondin type 1 motif 15 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:30,810,451...30,833,853
Ensembl chr 9:30,810,451...30,833,748 		JBrowse link
G Adamts16 ADAM metallopeptidase with thrombospondin type 1 motif 16 involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:70,875,917...70,989,956
Ensembl chr13:70,875,921...70,989,930 		JBrowse link
G Adamts17 ADAM metallopeptidase with thrombospondin type 1 motif 17 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:66,487,387...66,802,373
Ensembl chr 7:66,489,483...66,802,919 		JBrowse link
G Adamts18 ADAM metallopeptidase with thrombospondin type 1 motif 18 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:114,423,755...114,575,975
Ensembl chr 8:114,423,758...114,575,370 		JBrowse link
G Adamts19 ADAM metallopeptidase with thrombospondin type 1 motif 19 involved_in IBA GO_Central GO_REF:0000033 NCBI chr18:58,967,819...59,186,754
Ensembl chr18:58,969,739...59,187,132 		JBrowse link
G Adamts2 ADAM metallopeptidase with thrombospondin type 1 motif 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:50,492,912...50,698,400
Ensembl chr11:50,492,911...50,698,400 		JBrowse link
G Adamts20 ADAM metallopeptidase with thrombospondin type 1 motif 20 acts_upstream_of_or_within
involved_in		 IDA
IBA		 (PMID:18454205) MGI
GO_Central		 PMID:18454205 GO_REF:0000033 NCBI chr15:94,166,177...94,329,966
Ensembl chr15:94,168,044...94,363,299 		JBrowse link
G Adamts3 ADAM metallopeptidase with thrombospondin type 1 motif 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:89,821,700...90,031,521
Ensembl chr 5:89,824,946...90,031,193 		JBrowse link
G Adamts4 ADAM metallopeptidase with thrombospondin type 1 motif 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:171,077,698...171,089,836
Ensembl chr 1:171,077,990...171,088,206 		JBrowse link
G Adamts5 ADAM metallopeptidase with thrombospondin type 1 motif 5 involved_in TAS
IBA		 (MGI:5693221|PMID:23531444) BHF-UCL
GO_Central		 PMID:23531444 GO_REF:0000033 MGI:5693221 NCBI chr16:85,655,045...85,698,013
Ensembl chr16:85,653,061...85,698,716 		JBrowse link
G Adamts6 ADAM metallopeptidase with thrombospondin type 1 motif 6 involved_in IBA GO_Central GO_REF:0000033 NCBI chr13:104,423,026...104,633,203
Ensembl chr13:104,424,343...104,633,203 		JBrowse link
G Adamts7 ADAM metallopeptidase with thrombospondin type 1 motif 7 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:90,041,420...90,082,155
Ensembl chr 9:90,045,122...90,090,124 		JBrowse link
G Adamts8 ADAM metallopeptidase with thrombospondin type 1 motif 8 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:30,853,858...30,875,134
Ensembl chr 9:30,853,858...30,875,134 		JBrowse link
G Adamts9 ADAM metallopeptidase with thrombospondin type 1 motif 9 involved_in IMP
IBA		 (MGI:4452308|PMID:20096780) BHF-UCL
GO_Central		 PMID:20096780 GO_REF:0000033 MGI:4452308 NCBI chr 6:92,749,680...92,921,431
Ensembl chr 6:92,749,680...92,920,473 		JBrowse link
G Adamtsl1 ADAMTS-like 1 involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr 4:85,432,242...86,346,627
Ensembl chr 4:85,432,409...86,346,622 		JBrowse link
G Adamtsl2 ADAMTS-like 2 acts_upstream_of_or_within IMP (PMID:25762570) MGI PMID:25762570 NCBI chr 2:26,969,348...26,998,993
Ensembl chr 2:26,969,391...26,998,993 		JBrowse link
G Adamtsl4 ADAMTS-like 4 acts_upstream_of_or_within
involved_in		 IDA
IBA		 (PMID:18757743) MGI
GO_Central		 PMID:18757743 GO_REF:0000033 NCBI chr 3:95,583,511...95,595,232
Ensembl chr 3:95,583,511...95,595,228 		JBrowse link
G Agt angiotensinogen acts_upstream_of_or_within IMP (PMID:9734405) MGI PMID:9734405 NCBI chr 8:125,283,326...125,296,445
Ensembl chr 8:125,283,273...125,296,445 		JBrowse link
G Ambn ameloblastin acts_upstream_of_or_within TAS (PMID:9786327) MGI PMID:9786327 NCBI chr 5:88,603,850...88,616,390
Ensembl chr 5:88,603,850...88,616,390 		JBrowse link
G Apbb1 amyloid beta precursor protein binding family B member 1 acts_upstream_of_or_within IGI (PMID:16407979) MGI PMID:16407979 NCBI chr 7:105,207,691...105,231,151
Ensembl chr 7:105,207,690...105,230,860 		JBrowse link
G Apbb2 amyloid beta precursor protein binding family B member 2 acts_upstream_of_or_within IGI (PMID:16407979) MGI PMID:16407979 NCBI chr 5:66,456,068...66,779,189
Ensembl chr 5:66,456,046...66,776,127 		JBrowse link
G Aplp1 amyloid beta precursor like protein 1 acts_upstream_of_or_within IGI (PMID:15385965) MGI PMID:15385965 NCBI chr 7:30,134,405...30,144,960
Ensembl chr 7:30,134,407...30,144,960 		JBrowse link
G Aplp2 amyloid beta precursor-like protein 2 acts_upstream_of_or_within IGI (PMID:15385965) MGI PMID:15385965 NCBI chr 9:31,060,853...31,123,144
Ensembl chr 9:31,060,853...31,123,111 		JBrowse link
G App amyloid beta precursor protein acts_upstream_of_or_within IGI (PMID:15385965) MGI PMID:15385965 NCBI chr16:84,751,236...84,972,187
Ensembl chr16:84,746,573...84,970,654 		JBrowse link
G Atp7a ATPase, Cu++ transporting, alpha polypeptide acts_upstream_of_or_within IMP (PMID:1115218) MGI PMID:1115218 NCBI chr  X:105,070,830...105,171,766
Ensembl chr  X:105,070,882...105,168,532 		JBrowse link
G Atxn1l ataxin 1-like acts_upstream_of_or_within IMP (PMID:22014525) MGI PMID:22014525 NCBI chr 8:110,453,083...110,464,426
Ensembl chr 8:110,453,083...110,464,371 		JBrowse link
G B4galt1 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 acts_upstream_of_or_within IMP (PMID:11900463) MGI PMID:11900463 NCBI chr 4:40,804,602...40,855,711
Ensembl chr 4:40,804,602...40,854,005 		JBrowse link
G Bcl3 B cell leukemia/lymphoma 3 acts_upstream_of_or_within IMP (PMID:10586052) MGI PMID:10586052 NCBI chr 7:19,542,387...19,556,691
Ensembl chr 7:19,542,387...19,556,695 		JBrowse link
G Ccdc80 coiled-coil domain containing 80 involved_in
acts_upstream_of_or_within		 IBA
IDA		 (PMID:18757743) GO_Central
MGI		 PMID:18757743 GO_REF:0000033 NCBI chr16:44,913,770...44,948,287
Ensembl chr16:44,913,765...44,948,440 		JBrowse link
G Ccn1 cellular communication network factor 1 acts_upstream_of_or_within IDA (PMID:18757743) MGI PMID:18757743 NCBI chr 3:145,352,726...145,355,740
Ensembl chr 3:145,352,731...145,355,736 		JBrowse link
G Col10a1 collagen, type X, alpha 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:34,265,977...34,273,081
Ensembl chr10:34,265,977...34,273,081 		JBrowse link
G Col11a1 collagen, type XI, alpha 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:113,823,933...114,014,405
Ensembl chr 3:113,824,189...114,014,367 		JBrowse link
G Col13a1 collagen, type XIII, alpha 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:61,674,013...61,814,985
Ensembl chr10:61,674,015...61,814,887 		JBrowse link
G Col15a1 collagen, type XV, alpha 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:47,207,744...47,313,165
Ensembl chr 4:47,208,161...47,313,167 		JBrowse link
G Col16a1 collagen, type XVI, alpha 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:129,941,638...129,993,070
Ensembl chr 4:129,941,633...129,993,076 		JBrowse link
G Col17a1 collagen, type XVII, alpha 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr19:47,634,783...47,680,460
Ensembl chr19:47,634,783...47,680,533 		JBrowse link
G Col18a1 collagen, type XVIII, alpha 1 acts_upstream_of_or_within IMP (PMID:15254016) MGI PMID:15254016 NCBI chr10:76,888,013...77,002,351
Ensembl chr10:76,888,012...77,002,382 		JBrowse link
G Col19a1 collagen, type XIX, alpha 1 involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:15302855) GO_Central
MGI		 PMID:15302855 GO_REF:0000033 NCBI chr 1:24,296,764...24,627,870
Ensembl chr 1:24,300,971...24,626,553 		JBrowse link
G Col1a1 collagen, type I, alpha 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:94,827,050...94,843,868
Ensembl chr11:94,827,050...94,843,868 		JBrowse link
G Col1a2 collagen, type I, alpha 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:4,505,618...4,541,543
Ensembl chr 6:4,504,814...4,541,544 		JBrowse link
G Col22a1 collagen, type XXII, alpha 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr15:71,667,644...71,906,087
Ensembl chr15:71,667,644...71,906,076 		JBrowse link
G Col23a1 collagen, type XXIII, alpha 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:51,180,508...51,474,752
Ensembl chr11:51,180,747...51,474,745 		JBrowse link
G Col24a1 collagen, type XXIV, alpha 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:144,998,233...145,257,768
Ensembl chr 3:144,998,233...145,257,766 		JBrowse link
G Col27a1 collagen, type XXVII, alpha 1 acts_upstream_of_or_within IMP (PMID:22206015) MGI PMID:22206015 NCBI chr 4:63,132,246...63,253,228
Ensembl chr 4:63,132,241...63,253,228 		JBrowse link
G Col3a1 collagen, type III, alpha 1 involved_in IMP
IBA		 (PMID:31655293)
(PMID:25330296)		 MGI
GO_Central		 PMID:25330296 PMID:31655293 GO_REF:0000033 NCBI chr 1:45,350,698...45,388,866
Ensembl chr 1:45,350,698...45,388,866 		JBrowse link
G Col4a1 collagen, type IV, alpha 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:11,248,423...11,362,889
Ensembl chr 8:11,248,423...11,362,826 		JBrowse link
G Col4a2 collagen, type IV, alpha 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:11,362,878...11,499,287
Ensembl chr 8:11,362,805...11,499,287 		JBrowse link
G Col4a3 collagen, type IV, alpha 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:82,564,647...82,699,778
Ensembl chr 1:82,564,642...82,699,780 		JBrowse link
G Col4a5 collagen, type IV, alpha 5 involved_in IBA GO_Central GO_REF:0000033 NCBI chr  X:140,258,367...140,472,232
Ensembl chr  X:140,258,381...140,472,230 		JBrowse link
G Col4a6 collagen, type IV, alpha 6 acts_upstream_of_or_within
involved_in		 IDA
IBA		 (PMID:10965041) MGI
GO_Central		 PMID:10965041 GO_REF:0000033 NCBI chr  X:139,948,399...140,257,091
Ensembl chr  X:139,948,399...140,257,072 		JBrowse link
G Col5a2 collagen, type V, alpha 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:45,413,491...45,542,442
Ensembl chr 1:45,413,481...45,542,442 		JBrowse link
G Col5a3 collagen, type V, alpha 3 acts_upstream_of_or_within
involved_in		 ISS
IBA		 (PMID:10722718) MGI
GO_Central		 PMID:10722718 GO_REF:0000033 NCBI chr 9:20,681,353...20,726,363
Ensembl chr 9:20,681,346...20,726,363 		JBrowse link
G Col6a4 collagen, type VI, alpha 4 involved_in IDA (PMID:26571399) MGI PMID:26571399 NCBI chr 9:105,867,284...105,975,729
Ensembl chr 9:105,866,653...105,973,982 		JBrowse link
G Col7a1 collagen, type VII, alpha 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:108,782,654...108,813,943
Ensembl chr 9:108,782,654...108,813,943 		JBrowse link
G Col8a1 collagen, type VIII, alpha 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr16:57,444,619...57,575,100
Ensembl chr16:57,444,621...57,575,100 		JBrowse link
G Col8a2 collagen, type VIII, alpha 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:126,180,613...126,208,123
Ensembl chr 4:126,180,586...126,208,123 		JBrowse link
G Col9a1 collagen, type IX, alpha 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 1:24,216,670...24,291,819
Ensembl chr 1:24,216,691...24,291,765 		JBrowse link
G Col9a2 collagen, type IX, alpha 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:120,896,763...120,912,522
Ensembl chr 4:120,896,582...120,912,519 		JBrowse link
G Col9a3 collagen, type IX, alpha 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:180,239,895...180,263,985
Ensembl chr 2:180,239,583...180,263,982 		JBrowse link
G Colq collagen like tail subunit of asymmetric acetylcholinesterase involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:31,245,039...31,299,820
Ensembl chr14:31,245,039...31,313,300 		JBrowse link
G Crispld2 cysteine-rich secretory protein LCCL domain containing 2 acts_upstream_of_or_within IDA (PMID:18757743) MGI PMID:18757743 NCBI chr 8:120,719,177...120,779,533
Ensembl chr 8:120,719,177...120,779,532 		JBrowse link
G Csgalnact1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 acts_upstream_of_or_within IMP (PMID:21148564) MGI PMID:21148564 NCBI chr 8:68,809,433...69,188,270
Ensembl chr 8:68,809,433...69,187,798 		JBrowse link
G Dmp1 dentin matrix protein 1 involved_in
acts_upstream_of_or_within		 IBA
IDA		 (PMID:18757743) GO_Central
MGI		 PMID:18757743 GO_REF:0000033 NCBI chr 5:104,345,441...104,361,968
Ensembl chr 5:104,350,479...104,361,968 		JBrowse link
G Dnajb6 DnaJ heat shock protein family (Hsp40) member B6 acts_upstream_of_or_within IMP (PMID:21972064) MGI PMID:21972064 NCBI chr 5:29,940,896...29,991,476
Ensembl chr 5:29,940,686...30,023,132 		JBrowse link
G Ecm2 extracellular matrix protein 2, female organ and adipocyte specific acts_upstream_of_or_within
involved_in		 IDA
IBA		 (PMID:18757743) MGI
GO_Central		 PMID:18757743 GO_REF:0000033 NCBI chr13:49,658,259...49,686,267
Ensembl chr13:49,658,286...49,686,265 		JBrowse link
G Egfl6 EGF-like-domain, multiple 6 acts_upstream_of_or_within IDA (PMID:18757743) MGI PMID:18757743 NCBI chr  X:165,306,003...165,368,712
Ensembl chr  X:165,306,003...165,368,716 		JBrowse link
G Egflam EGF-like, fibronectin type III and laminin G domains acts_upstream_of_or_within IDA (PMID:18757743) MGI PMID:18757743 NCBI chr15:7,235,598...7,428,203
Ensembl chr15:7,235,601...7,427,876 		JBrowse link
G Elf3 E74-like factor 3 acts_upstream_of_or_within IMP (PMID:11984530) MGI PMID:11984530 NCBI chr 1:135,181,312...135,186,210
Ensembl chr 1:135,181,313...135,186,306 		JBrowse link
G Eln elastin acts_upstream_of_or_within IDA (PMID:18757743) MGI PMID:18757743 NCBI chr 5:134,731,449...134,776,300
Ensembl chr 5:134,731,447...134,776,177 		JBrowse link
G Emilin1 elastin microfibril interfacer 1 acts_upstream_of_or_within IDA (PMID:18757743) MGI PMID:18757743 NCBI chr 5:31,070,729...31,078,623
Ensembl chr 5:31,070,746...31,078,621 		JBrowse link
G Ercc2 excision repair cross-complementing rodent repair deficiency, complementation group 2 acts_upstream_of_or_within IMP (PMID:9651581) MGI PMID:9651581 NCBI chr 7:19,115,942...19,129,619
Ensembl chr 7:19,115,935...19,129,619 		JBrowse link
G Ero1a endoplasmic reticulum oxidoreductase 1 alpha acts_upstream_of_or_within IGI (PMID:22981861) MGI PMID:22981861 NCBI chr14:45,520,544...45,556,029
Ensembl chr14:45,520,544...45,556,228 		JBrowse link
G Ero1b endoplasmic reticulum oxidoreductase 1 beta acts_upstream_of_or_within IGI (PMID:22981861) MGI PMID:22981861 NCBI chr13:12,580,701...12,624,422
Ensembl chr13:12,580,755...12,626,285 		JBrowse link
G Fbln1 fibulin 1 acts_upstream_of_or_within
involved_in		 IDA
IBA		 (PMID:18757743) MGI
GO_Central		 PMID:18757743 GO_REF:0000033 NCBI chr15:85,090,150...85,170,495
Ensembl chr15:85,090,150...85,170,736 		JBrowse link
G Fbln5 fibulin 5 acts_upstream_of_or_within IDA (PMID:18757743) MGI PMID:18757743 NCBI chr12:101,712,820...101,785,541
Ensembl chr12:101,712,824...101,785,314 		JBrowse link
G Fkrp fukutin related protein acts_upstream_of_or_within IDA (PMID:31296900) MGI PMID:31296900 NCBI chr 7:16,543,192...16,550,657
Ensembl chr 7:16,543,171...16,550,657 		JBrowse link
G Fn1 fibronectin 1 involved_in ISO RGD
MGI		 PMID:12388756 GO_REF:0000096 MGI:4417868 RGD:1358623 NCBI chr 1:71,624,632...71,692,439
Ensembl chr 1:71,624,679...71,692,359 		JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within IGI (PMID:16439479) MGI PMID:16439479 NCBI chr 8:121,811,100...121,814,883
Ensembl chr 8:121,811,125...121,814,883 		JBrowse link
G Foxf2 forkhead box F2 acts_upstream_of_or_within IGI
IMP		 (PMID:16439479) MGI PMID:16439479 NCBI chr13:31,809,686...31,815,390
Ensembl chr13:31,809,799...31,815,386 		JBrowse link
G Gfap glial fibrillary acidic protein acts_upstream_of_or_within IMP (PMID:11487638) MGI PMID:11487638 NCBI chr11:102,778,162...102,791,368
Ensembl chr11:102,778,162...102,791,738 		JBrowse link
G Gfod2 glucose-fructose oxidoreductase domain containing 2 involved_in
acts_upstream_of_or_within		 IBA
IDA		 (PMID:18757743) GO_Central
MGI		 PMID:18757743 GO_REF:0000033 NCBI chr 8:106,440,676...106,485,299
Ensembl chr 8:106,440,486...106,485,296 		JBrowse link
G Hpse2 heparanase 2 acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:25510506) MGI
GO_Central		 PMID:25510506 GO_REF:0000033 NCBI chr19:42,774,980...43,376,913
Ensembl chr19:42,774,978...43,376,794 		JBrowse link
G Hsd17b12 hydroxysteroid (17-beta) dehydrogenase 12 acts_upstream_of_or_within IDA (PMID:18757743) MGI PMID:18757743 NCBI chr 2:93,863,042...93,988,254
Ensembl chr 2:93,863,034...93,988,309 		JBrowse link
G Hspg2 perlecan (heparan sulfate proteoglycan 2) acts_upstream_of_or_within IMP (PMID:10579729) MGI PMID:10579729 NCBI chr 4:137,196,062...137,297,941
Ensembl chr 4:137,196,080...137,297,941 		JBrowse link
G Ibsp integrin binding sialoprotein acts_upstream_of_or_within
involved_in		 IDA
IBA		 (PMID:18757743) MGI
GO_Central		 PMID:18757743 GO_REF:0000033 NCBI chr 5:104,447,153...104,459,338
Ensembl chr 5:104,447,037...104,459,335 		JBrowse link
G Idua iduronidase, alpha-L acts_upstream_of_or_within IMP (PMID:25410057) MGI PMID:25410057 NCBI chr 5:108,808,197...108,833,312
Ensembl chr 5:108,808,197...108,832,423 		JBrowse link
G Impg1 interphotoreceptor matrix proteoglycan 1 acts_upstream_of_or_within IMP (PMID:32265257) MGI PMID:32265257 NCBI chr 9:80,215,467...80,347,707
Ensembl chr 9:80,220,612...80,347,534 		JBrowse link
G Impg2 interphotoreceptor matrix proteoglycan 2 acts_upstream_of_or_within IMP (PMID:32265257) MGI PMID:32265257 NCBI chr16:56,019,447...56,094,119
Ensembl chr16:56,024,676...56,094,119 		JBrowse link
G Itga8 integrin alpha 8 acts_upstream_of_or_within IMP (PMID:10742111) MGI PMID:10742111 NCBI chr 2:12,111,443...12,306,755
Ensembl chr 2:12,111,443...12,306,733 		JBrowse link
G Itih1 inter-alpha trypsin inhibitor, heavy chain 1 acts_upstream_of_or_within IDA (PMID:17675295) MGI PMID:17675295 NCBI chr14:30,651,137...30,665,246
Ensembl chr14:30,651,137...30,665,246 		JBrowse link
G Kazald1 Kazal-type serine peptidase inhibitor domain 1 acts_upstream_of_or_within IDA (PMID:18757743) MGI PMID:18757743 NCBI chr19:45,063,404...45,067,728
Ensembl chr19:45,063,680...45,067,728 		JBrowse link
G Lgals3 lectin, galactose binding, soluble 3 acts_upstream_of_or_within IGI (PMID:15800063) MGI PMID:15800063 NCBI chr14:47,611,317...47,623,624
Ensembl chr14:47,605,208...47,623,617 		JBrowse link
G Mansc4 MANSC domain containing 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:146,976,560...146,988,530
Ensembl chr 6:146,976,558...146,988,530 		JBrowse link
G Matn1 matrilin 1, cartilage matrix protein involved_in NAS (MGI:1353153|PMID:10660556), (MGI:6869984|PMID:10397755) ComplexPortal PMID:10397755 PMID:10660556 MGI:1353153 MGI:6869984 NCBI chr 4:130,671,696...130,682,787
Ensembl chr 4:130,671,696...130,682,786 		JBrowse link
G Matn2 matrilin 2 involved_in NAS (MGI:1336568|PMID:10224097) ComplexPortal PMID:10224097 MGI:1336568 NCBI chr15:34,306,827...34,436,388
Ensembl chr15:34,306,823...34,436,419 		JBrowse link
G Matn3 matrilin 3 involved_in IDA
NAS		 (MGI:1353153|PMID:10660556) ComplexPortal PMID:10660556 MGI:1353153 NCBI chr12:8,997,929...9,022,028
Ensembl chr12:8,997,929...9,022,028 		JBrowse link
G Matn4 matrilin 4 involved_in NAS (MGI:1934728|PMID:11279097) ComplexPortal PMID:11279097 MGI:1934728 NCBI chr 2:164,231,313...164,247,080
Ensembl chr 2:164,231,313...164,247,080 		JBrowse link
G Mia MIA SH3 domain containing involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:11839810) GO_Central
MGI		 PMID:11839810 GO_REF:0000033 NCBI chr 7:26,879,166...26,880,574
Ensembl chr 7:26,879,167...26,880,582 		JBrowse link
G Mmp10 matrix metallopeptidase 10 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:7,502,343...7,510,243
Ensembl chr 9:7,502,353...7,510,241 		JBrowse link
G Mmp11 matrix metallopeptidase 11 acts_upstream_of_or_within
involved_in		 IMP
IBA		 (PMID:18622425) MGI
GO_Central		 PMID:18622425 GO_REF:0000033 NCBI chr10:75,759,056...75,768,336
Ensembl chr10:75,759,056...75,772,330 		JBrowse link
G Mmp12 matrix metallopeptidase 12 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:7,344,397...7,360,461
Ensembl chr 9:7,344,381...7,369,499 		JBrowse link
G Mmp13 matrix metallopeptidase 13 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:7,272,514...7,283,333
Ensembl chr 9:7,272,514...7,283,331 		JBrowse link
G Mmp14 matrix metallopeptidase 14 (membrane-inserted) involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:54,669,055...54,679,913
Ensembl chr14:54,669,069...54,682,821 		JBrowse link
G Mmp15 matrix metallopeptidase 15 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:96,078,924...96,100,921
Ensembl chr 8:96,078,896...96,101,708 		JBrowse link
G Mmp16 matrix metallopeptidase 16 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:17,853,072...18,117,479
Ensembl chr 4:17,852,893...18,119,145 		JBrowse link
G Mmp17 matrix metallopeptidase 17 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 5:129,661,215...129,688,163
Ensembl chr 5:129,661,233...129,688,163 		JBrowse link
G Mmp19 matrix metallopeptidase 19 involved_in IBA GO_Central GO_REF:0000033 NCBI chr10:128,626,779...128,636,696
Ensembl chr10:128,626,779...128,636,693 		JBrowse link
G Mmp1a matrix metallopeptidase 1a (interstitial collagenase) involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:7,464,141...7,476,870
Ensembl chr 9:7,464,141...7,476,857 		JBrowse link
G Mmp1b matrix metallopeptidase 1b (interstitial collagenase) involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:7,367,670...7,388,026
Ensembl chr 9:7,368,239...7,388,047 		JBrowse link
G Mmp2 matrix metallopeptidase 2 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 8:93,553,920...93,580,049
Ensembl chr 8:93,553,919...93,580,048 		JBrowse link
G Mmp20 matrix metallopeptidase 20 (enamelysin) involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:7,628,232...7,674,969
Ensembl chr 9:7,628,232...7,674,980 		JBrowse link
G Mmp21 matrix metallopeptidase 21 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 7:133,275,999...133,281,790
Ensembl chr 7:133,275,999...133,281,790 		JBrowse link
G Mmp23 matrix metallopeptidase 23 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 4:155,735,111...155,738,982
Ensembl chr 4:155,735,112...155,737,841 		JBrowse link
G Mmp24 matrix metallopeptidase 24 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 2:155,617,262...155,660,286
Ensembl chr 2:155,617,262...155,660,286 		JBrowse link
G Mmp25 matrix metallopeptidase 25 involved_in IBA GO_Central GO_REF:0000033 NCBI chr17:23,847,289...23,864,006
Ensembl chr17:23,847,285...23,864,251 		JBrowse link
G Mmp27 matrix metallopeptidase 27 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:7,571,397...7,581,886
Ensembl chr 9:7,571,397...7,581,886 		JBrowse link
G Mmp28 matrix metallopeptidase 28 (epilysin) involved_in IBA GO_Central GO_REF:0000033 NCBI chr11:83,331,594...83,353,890
Ensembl chr11:83,331,594...83,353,897 		JBrowse link
G Mmp3 matrix metallopeptidase 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:7,445,845...7,455,975
Ensembl chr 9:7,445,822...7,455,975 		JBrowse link
G Mmp7 matrix metallopeptidase 7 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:7,692,095...7,699,587
Ensembl chr 9:7,692,091...7,699,586 		JBrowse link
G Mmp8 matrix metallopeptidase 8 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:7,558,430...7,568,487
Ensembl chr 9:7,558,457...7,568,486 		JBrowse link
G Mmp9 matrix metallopeptidase 9 involved_in
acts_upstream_of_or_within		 IBA
IGI
IMP		 (PMID:15800063) GO_Central
MGI		 PMID:15800063 GO_REF:0000033 NCBI chr 2:164,782,246...164,797,770
Ensembl chr 2:164,782,700...164,797,770 		JBrowse link
G Mpzl3 myelin protein zero-like 3 acts_upstream_of_or_within IMP (PMID:15482472) MGI PMID:15482472 NCBI chr 9:44,966,479...44,988,735
Ensembl chr 9:44,966,484...44,988,734 		JBrowse link
G Myf5 myogenic factor 5 acts_upstream_of_or_within IMP (PMID:16554364) MGI PMID:16554364 NCBI chr10:107,318,769...107,322,787
Ensembl chr10:107,318,769...107,321,995 		JBrowse link
G Ndnf neuron-derived neurotrophic factor acts_upstream_of_or_within
involved_in		 IDA
IBA		 (PMID:18757743) MGI
GO_Central		 PMID:18757743 GO_REF:0000033 NCBI chr 6:65,648,595...65,689,307
Ensembl chr 6:65,648,574...65,689,310 		JBrowse link
G Nepn nephrocan acts_upstream_of_or_within IDA (PMID:18757743) MGI PMID:18757743 NCBI chr10:52,264,961...52,280,707
Ensembl chr10:52,265,068...52,280,721 		JBrowse link
G Nf1 neurofibromin 1 acts_upstream_of_or_within IMP (PMID:16835260) MGI PMID:16835260 NCBI chr11:79,223,541...79,472,435
Ensembl chr11:79,230,519...79,472,438 		JBrowse link
G Nfkb2 nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100 acts_upstream_of_or_within IMP (PMID:10586052) MGI PMID:10586052 NCBI chr19:46,285,478...46,300,839
Ensembl chr19:46,292,759...46,300,824 		JBrowse link
G Nid1 nidogen 1 acts_upstream_of_or_within IDA (PMID:18757743) MGI PMID:18757743 NCBI chr13:13,612,252...13,686,849
Ensembl chr13:13,612,136...13,686,854 		JBrowse link
G Nox1 NADPH oxidase 1 acts_upstream_of_or_within IMP (PMID:16386251) MGI PMID:16386251 NCBI chr  X:132,987,170...133,038,455
Ensembl chr  X:132,987,170...133,122,705 		JBrowse link
G Nphp3 nephronophthisis 3 (adolescent) acts_upstream_of_or_within IMP (PMID:7539536) MGI PMID:7539536 NCBI chr 9:103,879,743...103,921,010
Ensembl chr 9:103,879,743...103,921,017 		JBrowse link
G Npnt nephronectin acts_upstream_of_or_within IDA (PMID:18757743) MGI PMID:18757743 NCBI chr 3:132,587,506...132,656,052
Ensembl chr 3:132,587,506...132,656,052 		JBrowse link
G Nr2e1 nuclear receptor subfamily 2, group E, member 1 acts_upstream_of_or_within IMP (PMID:16424942) MGI PMID:16424942 NCBI chr10:42,437,959...42,459,721
Ensembl chr10:42,437,959...42,459,628 		JBrowse link
G Olfml2a olfactomedin-like 2A acts_upstream_of_or_within IDA (PMID:18757743) MGI PMID:18757743 NCBI chr 2:38,821,992...38,850,597
Ensembl chr 2:38,821,990...38,853,765 		JBrowse link
G Olfml2b olfactomedin-like 2B acts_upstream_of_or_within IDA (PMID:18757743) MGI PMID:18757743 NCBI chr 1:170,472,101...170,510,356
Ensembl chr 1:170,472,101...170,510,358 		JBrowse link
G Otol1 otolin 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 3:69,914,946...69,936,041
Ensembl chr 3:69,914,946...69,936,041 		JBrowse link
G Papln papilin, proteoglycan-like sulfated glycoprotein involved_in IEA UniProt GO_REF:0000002 MGI:2152098 NCBI chr12:83,809,769...83,841,914
Ensembl chr12:83,810,408...83,839,156 		JBrowse link
G Pdgfra platelet derived growth factor receptor, alpha polypeptide acts_upstream_of_or_within IMP (PMID:15543606) MGI PMID:15543606 NCBI chr 5:75,311,988...75,358,867
Ensembl chr 5:75,312,953...75,358,876 		JBrowse link
G Pomt1 protein-O-mannosyltransferase 1 acts_upstream_of_or_within IMP (PMID:15383666) MGI PMID:15383666 NCBI chr 2:32,126,321...32,145,017
Ensembl chr 2:32,126,602...32,145,017 		JBrowse link
G Postn periostin, osteoblast specific factor involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:16314533) GO_Central
MGI		 PMID:16314533 GO_REF:0000033 NCBI chr 3:54,266,688...54,298,462
Ensembl chr 3:54,268,530...54,298,458 		JBrowse link
G Prdx4 peroxiredoxin 4 acts_upstream_of_or_within IGI (PMID:22981861) MGI PMID:22981861 NCBI chr  X:154,106,914...154,125,268
Ensembl chr  X:154,106,914...154,123,750 		JBrowse link
G Ptk2 PTK2 protein tyrosine kinase 2 acts_upstream_of_or_within IMP (PMID:14642275) MGI PMID:14642275 NCBI chr15:73,076,951...73,297,192
Ensembl chr15:73,076,951...73,295,129 		JBrowse link
G Ptx3 pentraxin related gene acts_upstream_of_or_within IDA
IMP		 (PMID:17675295) MGI PMID:17675295 NCBI chr 3:66,127,308...66,133,227
Ensembl chr 3:66,127,331...66,133,226 		JBrowse link
G Pxdn peroxidasin involved_in IDA
ISO		 (MGI:3851833|PMID:19590037) UniProt
MGI		 PMID:19590037 GO_REF:0000119 MGI:3851833 MGI:4834177 NCBI chr12:29,986,641...30,067,657
Ensembl chr12:29,987,607...30,067,657 		JBrowse link
G Reck reversion-inducing-cysteine-rich protein with kazal motifs involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:11747814) GO_Central
MGI		 PMID:11747814 GO_REF:0000033 NCBI chr 4:43,875,521...43,944,806
Ensembl chr 4:43,875,530...43,944,806 		JBrowse link
G Rxfp1 relaxin/insulin-like family peptide receptor 1 acts_upstream_of_or_within IMP (PMID:15256493) MGI PMID:15256493 NCBI chr 3:79,548,910...79,645,258
Ensembl chr 3:79,548,918...79,645,187 		JBrowse link
G Scara3 scavenger receptor class A, member 3 involved_in IBA GO_Central GO_REF:0000033 NCBI chr14:66,156,844...66,191,427
Ensembl chr14:66,156,843...66,191,384 		JBrowse link
G Serac1 serine active site containing 1 acts_upstream_of_or_within IDA (PMID:18757743) MGI PMID:18757743 NCBI chr17:6,090,846...6,130,064
Ensembl chr17:6,092,471...6,130,016 		JBrowse link
G Serpinb5 serine (or cysteine) peptidase inhibitor, clade B, member 5 acts_upstream_of_or_within IMP (PMID:18593913) MGI PMID:18593913 NCBI chr 1:106,788,905...106,811,078
Ensembl chr 1:106,788,903...106,811,078 		JBrowse link
G Slc39a8 solute carrier family 39 (metal ion transporter), member 8 acts_upstream_of IMP
ISO		 (MGI:6117959|PMID:29337306) UniProt
MGI		 PMID:29337306 GO_REF:0000119 MGI:4834177 MGI:6117959 NCBI chr 3:135,522,644...135,594,333
Ensembl chr 3:135,531,040...135,594,333 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 acts_upstream_of_or_within IMP (PMID:18267097) MGI PMID:18267097 NCBI chr 9:21,527,377...21,615,526
Ensembl chr 9:21,527,465...21,615,526 		JBrowse link
G Smoc1 SPARC related modular calcium binding 1 acts_upstream_of_or_within
involved_in		 IDA
IBA		 (PMID:18757743) MGI
GO_Central		 PMID:18757743 GO_REF:0000033 NCBI chr12:81,073,582...81,233,188
Ensembl chr12:81,073,582...81,233,188 		JBrowse link
G Smoc2 SPARC related modular calcium binding 2 involved_in
acts_upstream_of_or_within		 IBA
IDA		 (PMID:18757743) GO_Central
MGI		 PMID:18757743 GO_REF:0000033 NCBI chr17:14,499,768...14,625,052
Ensembl chr17:14,499,768...14,625,052 		JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 acts_upstream_of_or_within IMP (PMID:24191021)
(PMID:17350610)		 MGI PMID:17350610 PMID:24191021 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586 		JBrowse link
G Spint1 serine protease inhibitor, Kunitz type 1 involved_in
acts_upstream_of_or_within		 IBA
IMP		 (PMID:17174946) GO_Central
MGI		 PMID:17174946 GO_REF:0000033 NCBI chr 2:119,067,841...119,079,995
Ensembl chr 2:119,067,843...119,080,008 		JBrowse link
G Spock2 sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2 acts_upstream_of_or_within IDA (PMID:18757743) MGI PMID:18757743 NCBI chr10:59,942,079...59,971,020
Ensembl chr10:59,942,041...59,971,020 		JBrowse link
G Tfip11 tuftelin interacting protein 11 involved_in NAS (MGI:1326845|PMID:11063033) UniProt PMID:11063033 MGI:1326845 NCBI chr 5:112,474,235...112,485,939
Ensembl chr 5:112,474,224...112,485,939 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 acts_upstream_of_or_within IMP (PMID:11784073), (PMID:15528466) MGI PMID:11784073 PMID:15528466 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186 		JBrowse link
G Tgfbi transforming growth factor, beta induced acts_upstream_of_or_within
involved_in		 IDA
IBA		 (PMID:18757743) MGI
GO_Central		 PMID:18757743 GO_REF:0000033 NCBI chr13:56,757,399...56,787,172
Ensembl chr13:56,757,336...56,787,375 		JBrowse link
G Thsd4 thrombospondin, type I, domain containing 4 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 9:59,874,214...60,429,394
Ensembl chr 9:59,874,214...60,429,329 		JBrowse link
G Tnf tumor necrosis factor acts_upstream_of_or_within IDA (PMID:15381731) MGI PMID:15381731 NCBI chr17:35,418,343...35,420,983
Ensembl chr17:35,418,357...35,420,983 		JBrowse link
G Tnfrsf11b tumor necrosis factor receptor superfamily, member 11b (osteoprotegerin) acts_upstream_of_or_within IDA (PMID:18757743) MGI PMID:18757743 NCBI chr15:54,114,014...54,141,700
Ensembl chr15:54,114,015...54,141,880 		JBrowse link
G Tnr tenascin R acts_upstream_of_or_within IMP (PMID:10341229), (PMID:11077416), (PMID:16870730) MGI PMID:10341229 PMID:11077416 PMID:16870730 NCBI chr 1:159,351,170...159,759,299
Ensembl chr 1:159,351,339...159,759,299 		JBrowse link
G Tnxb tenascin XB acts_upstream_of_or_within IMP (PMID:15242785) MGI PMID:15242785 NCBI chr17:34,879,427...34,938,789
Ensembl chr17:34,879,431...34,938,789 		JBrowse link
G Vhl von Hippel-Lindau tumor suppressor acts_upstream_of_or_within IMP (PMID:16537898) MGI PMID:16537898 NCBI chr 6:113,600,955...113,608,595
Ensembl chr 6:113,600,920...113,608,594 		JBrowse link
G Vit vitrin acts_upstream_of_or_within
involved_in		 IDA
IBA		 (PMID:18757743) MGI
GO_Central		 PMID:18757743 GO_REF:0000033 NCBI chr17:78,815,480...78,934,838
Ensembl chr17:78,815,493...78,934,837 		JBrowse link
G Vtn vitronectin acts_upstream_of_or_within IDA (PMID:18757743) MGI PMID:18757743 NCBI chr11:78,389,946...78,393,151
Ensembl chr11:78,389,917...78,393,150 		JBrowse link
G Vwa1 von Willebrand factor A domain containing 1 acts_upstream_of_or_within IMP
IDA		 (PMID:19279005)
(PMID:18757743)		 MGI PMID:18757743 PMID:19279005 NCBI chr 4:155,852,952...155,859,042
Ensembl chr 4:155,852,606...155,859,155 		JBrowse link
G Wnt3a wingless-type MMTV integration site family, member 3A acts_upstream_of_or_within IDA (PMID:17943183) MGI PMID:17943183 NCBI chr11:59,138,859...59,181,579
Ensembl chr11:59,138,859...59,181,578 		JBrowse link
gene expression involved in extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dspp dentin sialophosphoprotein acts_upstream_of_or_within IMP (PMID:23900597) MGI PMID:23900597 NCBI chr 5:104,318,569...104,327,993
Ensembl chr 5:104,318,578...104,327,993 		JBrowse link
G Pbxip1 pre B cell leukemia transcription factor interacting protein 1 acts_upstream_of_or_within IMP (PMID:30659184) MGI PMID:30659184 NCBI chr 3:89,343,982...89,358,259
Ensembl chr 3:89,344,013...89,358,259 		JBrowse link
G Zfp469 zinc finger protein 469 acts_upstream_of_or_within IMP (PMID:34368841) MGI PMID:34368841 NCBI chr 8:122,770,009...122,999,389
Ensembl chr 8:122,985,359...122,999,389 		JBrowse link
glomerular basement membrane development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col4a3 collagen, type IV, alpha 3 involved_in IMP (MGI:3610934|PMID:12631063) UniProt PMID:12631063 MGI:3610934 NCBI chr 1:82,564,647...82,699,778
Ensembl chr 1:82,564,642...82,699,780 		JBrowse link
G Col4a4 collagen, type IV, alpha 4 involved_in
acts_upstream_of_or_within		 ISO
IBA
IMP		 (PMID:10534397) MGI
GO_Central		 PMID:10534397 GO_REF:0000033 GO_REF:0000119 MGI:4834177 NCBI chr 1:82,426,140...82,564,570
Ensembl chr 1:82,426,144...82,564,570 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within IMP (PMID:18480751) MGI PMID:18480751 NCBI chr15:52,931,657...53,209,579
Ensembl chr15:52,927,434...53,209,555 		JBrowse link
G Mpv17 MpV17 mitochondrial inner membrane protein involved_in IMP (MGI:3776221|PMID:16041630) UniProt PMID:16041630 MGI:3776221 NCBI chr 5:31,298,007...31,311,595
Ensembl chr 5:31,297,998...31,311,595 		JBrowse link
G Myo1e myosin IE involved_in IMP (MGI:4441423|PMID:19005011) UniProt PMID:19005011 MGI:4441423 NCBI chr 9:70,114,632...70,307,349
Ensembl chr 9:70,114,632...70,307,048 		JBrowse link
G Nid1 nidogen 1 acts_upstream_of_or_within IMP (PMID:14566019) MGI PMID:14566019 NCBI chr13:13,612,252...13,686,849
Ensembl chr13:13,612,136...13,686,854 		JBrowse link
G Sulf1 sulfatase 1 involved_in IGI
IBA		 (MGI:5306737|PMID:21719793) UniProt
GO_Central		 PMID:21719793 GO_REF:0000033 MGI:5306737 NCBI chr 1:12,762,421...12,946,090
Ensembl chr 1:12,762,501...12,931,416 		JBrowse link
G Sulf2 sulfatase 2 involved_in IGI
IBA		 (MGI:5306737|PMID:21719793) UniProt
GO_Central		 PMID:21719793 GO_REF:0000033 MGI:5306737 NCBI chr 2:165,915,819...165,997,603
Ensembl chr 2:165,915,009...165,997,583 		JBrowse link
G Wt1 WT1 transcription factor involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:104,956,874...105,003,959
Ensembl chr 2:104,956,874...105,003,961 		JBrowse link
metanephric glomerular basement membrane development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lamb2 laminin, beta 2 acts_upstream_of_or_within IMP (PMID:16886065), (PMID:7670489) MGI PMID:7670489 PMID:16886065 NCBI chr 9:108,357,080...108,367,729
Ensembl chr 9:108,356,935...108,367,729 		JBrowse link
negative regulation of collagen fibril organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chadl chondroadherin-like involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr15:81,570,366...81,581,564
Ensembl chr15:81,562,497...81,581,488 		JBrowse link
G Emilin1 elastin microfibril interfacer 1 involved_in IMP (MGI:5605894|PMID:25056700) BHF-UCL PMID:25056700 MGI:5605894 NCBI chr 5:31,070,729...31,078,623
Ensembl chr 5:31,070,746...31,078,621 		JBrowse link
negative regulation of extracellular matrix assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Antxr1 anthrax toxin receptor 1 acts_upstream_of_or_within IMP (PMID:25572963) MGI PMID:25572963 NCBI chr 6:87,110,835...87,312,757
Ensembl chr 6:87,110,835...87,312,803 		JBrowse link
G Mir145a microRNA 145a involved_in
acts_upstream_of		 ISO (PMID:25704091)
(PMID:25323858)		 BHF-UCL PMID:25323858 PMID:25704091 NCBI chr18:61,780,896...61,780,965
Ensembl chr18:61,780,896...61,780,965 		JBrowse link
G Mir18 microRNA 18 involved_in ISO (PMID:28131417) BHF-UCL PMID:28131417 NCBI chr14:115,281,283...115,281,378
Ensembl chr14:115,281,283...115,281,378 		JBrowse link
G Mir19a microRNA 19a acts_upstream_of ISO (PMID:27098600) BHF-UCL PMID:27098600 NCBI chr14:115,281,432...115,281,513
Ensembl chr14:115,281,432...115,281,513 		JBrowse link
G Mir19b-1 microRNA 19b-1 acts_upstream_of ISO (PMID:27098600) BHF-UCL PMID:27098600 NCBI chr14:115,281,737...115,281,823
Ensembl chr14:115,281,737...115,281,823 		JBrowse link
G Mir19b-2 microRNA 19b-2 acts_upstream_of ISO (PMID:27098600) BHF-UCL PMID:27098600 NCBI chr  X:51,830,860...51,830,943
Ensembl chr  X:51,830,860...51,830,943 		JBrowse link
G Mir27b microRNA 27b acts_upstream_of ISO (PMID:28095798) BHF-UCL PMID:28095798 NCBI chr13:63,448,526...63,448,598
Ensembl chr13:63,448,526...63,448,598 		JBrowse link
G Mir483 microRNA 483 acts_upstream_of ISO (PMID:26747772) BHF-UCL PMID:26747772 NCBI chr 7:142,208,661...142,208,733
Ensembl chr 7:142,208,661...142,208,733 		JBrowse link
G Mir9-1 microRNA 9-1 acts_upstream_of ISO (PMID:26315535) BHF-UCL PMID:26315535 NCBI chr 3:88,122,905...88,122,993
Ensembl chr 3:88,122,905...88,122,993 		JBrowse link
G Mir9-2 microRNA 9-2 acts_upstream_of ISO (PMID:26315535) BHF-UCL PMID:26315535 NCBI chr13:83,886,933...83,887,004
Ensembl chr13:83,886,933...83,887,004 		JBrowse link
G Mir9-3 microRNA 9-3 acts_upstream_of ISO (PMID:26315535) BHF-UCL PMID:26315535 NCBI chr 7:79,155,012...79,155,101
Ensembl chr 7:79,155,012...79,155,101 		JBrowse link
G Mir98 microRNA 98 acts_upstream_of ISO (PMID:28251559) BHF-UCL PMID:28251559 NCBI chr  X:150,696,210...150,696,317
Ensembl chr  X:150,696,210...150,696,317 		JBrowse link
G Pparg peroxisome proliferator activated receptor gamma involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:115,337,828...115,467,365
Ensembl chr 6:115,337,912...115,467,360 		JBrowse link
G Tgfbr3 transforming growth factor, beta receptor III involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:107,254,433...107,437,495
Ensembl chr 5:107,254,436...107,437,495 		JBrowse link
negative regulation of extracellular matrix constituent secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adtrp androgen dependent TFPI regulating protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:41,916,621...42,001,092
Ensembl chr13:41,916,624...42,001,160 		JBrowse link
G Notch1 notch 1 involved_in IMP (MGI:6158728|PMID:26491108) BHF-UCL PMID:26491108 MGI:6158728 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Tnfrsf1a tumor necrosis factor receptor superfamily, member 1a involved_in IGI (MGI:6158728|PMID:26491108) BHF-UCL PMID:26491108 MGI:6158728 NCBI chr 6:125,326,686...125,339,446
Ensembl chr 6:125,326,325...125,339,447 		JBrowse link
G Tnfrsf1b tumor necrosis factor receptor superfamily, member 1b involved_in IGI (MGI:6158728|PMID:26491108) BHF-UCL PMID:26491108 MGI:6158728 NCBI chr 4:144,938,938...144,973,453
Ensembl chr 4:144,940,033...144,973,440 		JBrowse link
negative regulation of extracellular matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cst3 cystatin C involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:148,713,642...148,717,432
Ensembl chr 2:148,713,642...148,717,612 		JBrowse link
G Dpp4 dipeptidylpeptidase 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:62,160,417...62,242,635
Ensembl chr 2:62,160,417...62,242,575 		JBrowse link
G Fap fibroblast activation protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:62,331,280...62,404,365
Ensembl chr 2:62,331,287...62,404,419 		JBrowse link
G Mir98 microRNA 98 involved_in ISO (PMID:26587789) ARUK-UCL PMID:26587789 NCBI chr  X:150,696,210...150,696,317
Ensembl chr  X:150,696,210...150,696,317 		JBrowse link
negative regulation of extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fap fibroblast activation protein involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:62,331,280...62,404,365
Ensembl chr 2:62,331,287...62,404,419 		JBrowse link
polarized secretion of basement membrane proteins in epithelium term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Prickle1 prickle planar cell polarity protein 1 involved_in IMP (PMID:33144400) MGI PMID:33144400 NCBI chr15:93,396,992...93,494,147
Ensembl chr15:93,396,995...93,493,772 		JBrowse link
positive regulation of basement membrane assembly involved in embryonic body morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clasp1 CLIP associating protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:118,314,976...118,537,192
Ensembl chr 1:118,316,788...118,540,408 		JBrowse link
G Clasp2 CLIP associating protein 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:113,567,776...113,748,765
Ensembl chr 9:113,570,541...113,748,750 		JBrowse link
G Dag1 dystroglycan 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:108,082,060...108,141,176
Ensembl chr 9:108,081,833...108,141,157 		JBrowse link
G Phldb1 pleckstrin homology like domain, family B, member 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:44,597,605...44,649,800
Ensembl chr 9:44,597,601...44,646,495 		JBrowse link
G Phldb2 pleckstrin homology like domain, family B, member 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:45,566,593...45,773,961
Ensembl chr16:45,566,606...45,773,961 		JBrowse link
positive regulation of collagen fibril organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Colgalt1 collagen beta(1-O)galactosyltransferase 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:72,063,631...72,077,555
Ensembl chr 8:72,063,642...72,077,555 		JBrowse link
G Efemp2 epidermal growth factor-containing fibulin-like extracellular matrix protein 2 involved_in IMP (MGI:5660411|PMID:26178373), (MGI:5695689|PMID:26220971), (MGI:6158865|PMID:26711913) UniProt PMID:26178373 PMID:26220971 PMID:26711913 MGI:5660411 MGI:5695689 MGI:6158865 NCBI chr19:5,523,974...5,532,548
Ensembl chr19:5,523,982...5,532,545 		JBrowse link
G Rb1 RB transcriptional corepressor 1 involved_in IMP (MGI:6112863|PMID:29304157) BHF-UCL PMID:29304157 MGI:6112863 NCBI chr14:73,430,298...73,563,446
Ensembl chr14:73,421,113...73,563,262 		JBrowse link
G Tnxb tenascin XB involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr17:34,879,427...34,938,789
Ensembl chr17:34,879,431...34,938,789 		JBrowse link
positive regulation of extracellular matrix assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen acts_upstream_of ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:125,283,326...125,296,445
Ensembl chr 8:125,283,273...125,296,445 		JBrowse link
G Emilin1 elastin microfibril interfacer 1 involved_in IMP (MGI:5605894|PMID:25056700) BHF-UCL PMID:25056700 MGI:5605894 NCBI chr 5:31,070,729...31,078,623
Ensembl chr 5:31,070,746...31,078,621 		JBrowse link
G Mad2l2 MAD2 mitotic arrest deficient-like 2 involved_in ISO RGD
MGI		 PMID:27488450 GO_REF:0000096 MGI:4417868 RGD:152995505 NCBI chr 4:148,214,615...148,230,161
Ensembl chr 4:148,214,841...148,230,156 		JBrowse link
G Mir27b microRNA 27b acts_upstream_of ISO (PMID:30729664) BHF-UCL PMID:30729664 NCBI chr13:63,448,526...63,448,598
Ensembl chr13:63,448,526...63,448,598 		JBrowse link
G Rgcc regulator of cell cycle involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:79,526,190...79,539,075
Ensembl chr14:79,526,196...79,539,085 		JBrowse link
G Smad3 SMAD family member 3 involved_in
acts_upstream_of		 ISO (PMID:21307346) BHF-UCL
MGI		 PMID:21307346 GO_REF:0000119 MGI:4834177 NCBI chr 9:63,554,048...63,665,276
Ensembl chr 9:63,554,049...63,665,276 		JBrowse link
G Smad4 SMAD family member 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr18:73,767,861...73,836,862
Ensembl chr18:73,772,080...73,836,851 		JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 acts_upstream_of_or_within IMP (PMID:20881014) MGI PMID:20881014 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 acts_upstream_of IDA (MGI:5775885|PMID:24279830) BHF-UCL PMID:24279830 MGI:5775885 NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502 		JBrowse link
G Tgfbr1 transforming growth factor, beta receptor I acts_upstream_of ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:47,353,258...47,414,926
Ensembl chr 4:47,353,222...47,414,931 		JBrowse link
positive regulation of extracellular matrix constituent secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen involved_in ISO RGD
MGI		 PMID:21419085 GO_REF:0000096 MGI:4417868 RGD:5129171 NCBI chr 8:125,283,326...125,296,445
Ensembl chr 8:125,283,273...125,296,445 		JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in IMP (MGI:3640731|PMID:16730346) BHF-UCL PMID:16730346 MGI:3640731 NCBI chr 2:133,394,079...133,404,816
Ensembl chr 2:133,394,079...133,404,805 		JBrowse link
G Cpb2 carboxypeptidase B2 involved_in ISO RGD
MGI		 PMID:23369837 GO_REF:0000096 MGI:4417868 RGD:7243115 NCBI chr14:75,479,727...75,520,995
Ensembl chr14:75,479,727...75,520,995 		JBrowse link
G Ier3ip1 immediate early response 3 interacting protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr18:77,017,723...77,029,310
Ensembl chr18:77,017,713...77,029,308 		JBrowse link
G Rgcc regulator of cell cycle involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr14:79,526,190...79,539,075
Ensembl chr14:79,526,196...79,539,085 		JBrowse link
positive regulation of extracellular matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Carmil2 capping protein regulator and myosin 1 linker 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:106,412,642...106,424,827
Ensembl chr 8:106,412,906...106,424,819 		JBrowse link
G Clasp1 CLIP associating protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 1:118,314,976...118,537,192
Ensembl chr 1:118,316,788...118,540,408 		JBrowse link
G Clasp2 CLIP associating protein 2 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 9:113,567,776...113,748,765
Ensembl chr 9:113,570,541...113,748,750 		JBrowse link
G Ddr2 discoidin domain receptor family, member 2 involved_in IMP (MGI:2158097|PMID:11723120) UniProt PMID:11723120 MGI:2158097 NCBI chr 1:169,799,874...169,938,525
Ensembl chr 1:169,799,876...169,938,331 		JBrowse link
G Fscn1 fascin actin-bundling protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:142,946,110...142,958,944
Ensembl chr 5:142,946,098...142,958,940 		JBrowse link
G Il6 interleukin 6 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 5:30,218,112...30,224,973
Ensembl chr 5:30,218,112...30,224,979 		JBrowse link
G Meltf melanotransferrin involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr16:31,697,449...31,717,838
Ensembl chr16:31,697,628...31,717,838 		JBrowse link
G Pdpn podoplanin involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:142,993,979...143,026,134
Ensembl chr 4:142,994,001...143,026,134 		JBrowse link
G Sema5a sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A involved_in NAS (MGI:5526935|PMID:19850054) UniProt PMID:19850054 MGI:5526935 NCBI chr15:32,244,959...32,696,487
Ensembl chr15:32,244,956...32,696,487 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in IDA (MGI:5688835|PMID:21984612) UniProt PMID:21984612 MGI:5688835 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186 		JBrowse link
positive regulation of extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 c-abl oncogene 1, non-receptor tyrosine kinase involved_in ISO RGD
MGI		 PMID:19846571 GO_REF:0000096 MGI:4417868 RGD:8693597 NCBI chr 2:31,578,256...31,697,105
Ensembl chr 2:31,578,388...31,694,239 		JBrowse link
G Cflar CASP8 and FADD-like apoptosis regulator involved_in ISO RGD
MGI		 PMID:24691542 GO_REF:0000096 MGI:4417868 RGD:11341715 NCBI chr 1:58,750,353...58,798,043
Ensembl chr 1:58,750,667...58,798,043 		JBrowse link
G Cyp2j6 cytochrome P450, family 2, subfamily j, polypeptide 6 involved_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 4:96,404,375...96,449,835
Ensembl chr 4:96,404,375...96,441,898 		JBrowse link
G Cyp2j9 cytochrome P450, family 2, subfamily j, polypeptide 9 ISO RGD PMID:29656108 RGD:150520032 NCBI chr 4:96,456,661...96,480,748
Ensembl chr 4:96,456,666...96,479,815 		JBrowse link
G Rb1 RB transcriptional corepressor 1 involved_in IMP (MGI:6112863|PMID:29304157) BHF-UCL PMID:29304157 MGI:6112863 NCBI chr14:73,430,298...73,563,446
Ensembl chr14:73,421,113...73,563,262 		JBrowse link
regulation of basement membrane organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lama1 laminin, alpha 1 involved_in NAS (MGI:6879399|PMID:2119632) ComplexPortal PMID:2119632 MGI:6879399 NCBI chr17:68,004,129...68,129,640
Ensembl chr17:68,004,254...68,129,642 		JBrowse link
G Lama2 laminin, alpha 2 involved_in NAS (MGI:6879399|PMID:2119632) ComplexPortal PMID:2119632 MGI:6879399 NCBI chr10:26,857,281...27,493,021
Ensembl chr10:26,856,032...27,495,754 		JBrowse link
G Lamb1 laminin B1 involved_in NAS (MGI:6879399|PMID:2119632) ComplexPortal PMID:2119632 MGI:6879399 NCBI chr12:31,315,230...31,379,643
Ensembl chr12:31,315,233...31,379,643 		JBrowse link
G Lamb2 laminin, beta 2 involved_in NAS (MGI:6879399|PMID:2119632) ComplexPortal PMID:2119632 MGI:6879399 NCBI chr 9:108,357,080...108,367,729
Ensembl chr 9:108,356,935...108,367,729 		JBrowse link
G Lamc1 laminin, gamma 1 involved_in NAS (MGI:6879399|PMID:2119632) ComplexPortal PMID:2119632 MGI:6879399 NCBI chr 1:153,094,668...153,208,532
Ensembl chr 1:153,094,668...153,208,532 		JBrowse link
G Nid1 nidogen 1 involved_in NAS (MGI:6879399|PMID:2119632) ComplexPortal PMID:2119632 MGI:6879399 NCBI chr13:13,612,252...13,686,849
Ensembl chr13:13,612,136...13,686,854 		JBrowse link
regulation of collagen fibril organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aebp1 AE binding protein 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr11:5,806,085...5,822,248
Ensembl chr11:5,811,947...5,822,088 		JBrowse link
G Col6a1 collagen, type VI, alpha 1 acts_upstream_of_or_within IMP (PMID:20951202) MGI PMID:20951202 NCBI chr10:76,544,626...76,561,869
Ensembl chr10:76,544,626...76,562,002 		JBrowse link
G Efemp2 epidermal growth factor-containing fibulin-like extracellular matrix protein 2 involved_in IMP (MGI:5776647|PMID:26690653) UniProt PMID:26690653 MGI:5776647 NCBI chr19:5,523,974...5,532,548
Ensembl chr19:5,523,982...5,532,545 		JBrowse link
regulation of extracellular matrix assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:125,283,326...125,296,445
Ensembl chr 8:125,283,273...125,296,445 		JBrowse link
G Has2 hyaluronan synthase 2 involved_in ISO RGD
MGI		 PMID:27094859 GO_REF:0000096 MGI:4417868 RGD:12910548 NCBI chr15:56,529,023...56,557,942
Ensembl chr15:56,529,023...56,557,935 		JBrowse link
G Notch1 notch 1 involved_in IMP (MGI:5298073|PMID:21311046) BHF-UCL PMID:21311046 MGI:5298073 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Tie1 tyrosine kinase with immunoglobulin-like and EGF-like domains 1 acts_upstream_of IMP (MGI:6370101|PMID:31319059) BHF-UCL PMID:31319059 MGI:6370101 NCBI chr 4:118,328,388...118,347,046
Ensembl chr 4:118,328,388...118,347,258 		JBrowse link
regulation of extracellular matrix constituent secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ric1 RAB6A GEF complex partner 1 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr19:29,499,637...29,583,909
Ensembl chr19:29,499,682...29,584,229 		JBrowse link
regulation of extracellular matrix disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddr1 discoidin domain receptor family, member 1 involved_in IMP
ISO		 (MGI:3629583|PMID:12065315) UniProt
MGI		 PMID:12065315 GO_REF:0000119 MGI:3629583 MGI:4834177 NCBI chr17:35,992,459...36,015,633
Ensembl chr17:35,992,459...36,015,513 		JBrowse link
G Ets1 E26 avian leukemia oncogene 1, 5' domain involved_in ISO RGD
MGI		 PMID:16738537 GO_REF:0000096 MGI:4417868 RGD:2313717 NCBI chr 9:32,547,501...32,669,116
Ensembl chr 9:32,547,517...32,669,116 		JBrowse link
G Fgfr4 fibroblast growth factor receptor 4 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr13:55,300,631...55,316,572
Ensembl chr13:55,300,453...55,316,572 		JBrowse link
regulation of extracellular matrix organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abl1 c-abl oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within IGI (PMID:20980600) MGI PMID:20980600 NCBI chr 2:31,578,256...31,697,105
Ensembl chr 2:31,578,388...31,694,239 		JBrowse link
G Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase acts_upstream_of_or_within IGI (PMID:20980600) MGI PMID:20980600 NCBI chr 1:156,386,160...156,477,189
Ensembl chr 1:156,386,356...156,477,138 		JBrowse link
G Angptl7 angiopoietin-like 7 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 4:148,579,737...148,584,919
Ensembl chr 4:148,579,640...148,584,917 		JBrowse link
G Axin2 axin 2 involved_in IMP (MGI:6108194|PMID:28069701) BHF-UCL PMID:28069701 MGI:6108194 NCBI chr11:108,808,687...108,841,609
Ensembl chr11:108,811,175...108,841,609 		JBrowse link
G Itgb3 integrin beta 3 acts_upstream_of_or_within IMP (PMID:22984613) MGI PMID:22984613 NCBI chr11:104,498,826...104,561,302
Ensembl chr11:104,498,826...104,561,302 		JBrowse link
G Lemd3 LEM domain containing 3 acts_upstream_of_or_within IMP (PMID:16943282) MGI PMID:16943282 NCBI chr10:120,759,316...120,815,491
Ensembl chr10:120,759,318...120,815,237 		JBrowse link
G Mir21a microRNA 21a acts_upstream_of ISO (PMID:18591254) BHF-UCL PMID:18591254 NCBI chr11:86,474,893...86,474,984
Ensembl chr11:86,474,893...86,474,984 		JBrowse link
G Prdm5 PR domain containing 5 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 6:65,754,640...65,914,606
Ensembl chr 6:65,755,972...65,913,994 		JBrowse link
G Reck reversion-inducing-cysteine-rich protein with kazal motifs involved_in ISO (PMID:18591254) BHF-UCL PMID:18591254 NCBI chr 4:43,875,521...43,944,806
Ensembl chr 4:43,875,530...43,944,806 		JBrowse link
G Slc2a10 solute carrier family 2 (facilitated glucose transporter), member 10 acts_upstream_of_or_within ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 2:165,345,817...165,361,837
Ensembl chr 2:165,345,707...165,361,837 		JBrowse link
G Tcf15 transcription factor 15 acts_upstream_of_or_within IMP (PMID:24038871) MGI PMID:24038871 NCBI chr 2:151,984,973...151,991,017
Ensembl chr 2:151,985,481...151,991,017 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 acts_upstream_of_or_within IMP (PMID:21780244) MGI PMID:21780244 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186 		JBrowse link
G Zfp469 zinc finger protein 469 involved_in ISO MGI GO_REF:0000119 MGI:4834177 NCBI chr 8:122,770,009...122,999,389
Ensembl chr 8:122,985,359...122,999,389 		JBrowse link
vitelline membrane formation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ihh Indian hedgehog acts_upstream_of_or_within IMP (PMID:17881493) MGI PMID:17881493 NCBI chr 1:74,984,474...74,990,831
Ensembl chr 1:74,984,474...74,990,831 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 28573
    cellular process 17545
      cellular component organization or biogenesis 6954
        cellular component organization 6731
          external encapsulating structure organization 347
            S-layer organization 0
            capsule organization + 0
            cell envelope organization + 1
            cell wall organization + 0
            egg chorion assembly + 0
            exosporium assembly 0
            extracellular matrix organization + 346
            pollen wall assembly + 0
            slime layer organization + 0
paths to the root