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ONTOLOGY REPORT - ANNOTATIONS

Term:cell-cell junction organization
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Accession:GO:0045216 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cell-cell junction. A cell-cell junction is a specialized region of connection between two cells.
Synonyms:exact_synonym: cell-cell junction assembly and maintenance;   cell-cell junction organisation;   intercellular junction assembly and maintenance
 related_synonym: cell-cell junction biogenesis
 xref: Reactome:R-HSA-421270 "Cell-cell junction organization"


show annotations for term's descendants           Sort by:
cell-cell junction organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ajm1 apical junction component 1 homolog involved_in IBA
IEA 		GO_REF:0000033
GO_REF:0000002 		GO_Central
InterPro		 GO_REF:0000002 GO_REF:0000033 NCBI chr 3:28,793,078...28,799,459
Ensembl chr 3:8,392,889...8,401,321 		JBrowse link
G Bhlha15 basic helix-loop-helix family, member a15 acts_upstream_of_or_within ISO MGI:891976 (PMID:19013146) RGD PMID:19013146 NCBI chr12:15,534,123...15,538,299
Ensembl chr12:10,420,467...10,424,713 		JBrowse link
G Ccm2 CCM2 scaffold protein acts_upstream_of_or_within ISO
IEA 		MGI:3512761 (PMID:19151727)
GO_REF:0000107 		RGD
Ensembl		 PMID:19151727 GO_REF:0000107 NCBI chr14:85,632,338...85,678,016
Ensembl chr14:81,418,236...81,464,116 		JBrowse link
G Cd2ap CD2-associated protein acts_upstream_of_or_within ISO MGI:1330281|MGI:2664945 (PMID:19013146), (PMID:25968128) RGD PMID:19013146 PMID:25968128 NCBI chr 9:25,580,071...25,679,968
Ensembl chr 9:18,086,984...18,182,199 		JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 involved_in ISO (PMID:23800882) RGD PMID:23800882 NCBI chr 1:90,171,401...90,187,810
Ensembl chr 1:81,043,595...81,059,992 		JBrowse link
G Cldn1 claudin 1 acts_upstream_of_or_within ISO
IEA 		(PMID:20164257)
GO_REF:0000107 		RGD
Ensembl		 PMID:20164257 GO_REF:0000107 NCBI chr11:87,926,376...87,941,533
Ensembl chr11:74,421,569...74,436,724 		JBrowse link
G Cldn6 claudin 6 acts_upstream_of_or_within ISO (PMID:17130295) RGD PMID:17130295 NCBI chr10:13,213,837...13,218,578
Ensembl chr10:12,709,960...12,715,973 		JBrowse link
G Cldn9 claudin 9 acts_upstream_of_or_within ISO (PMID:17130295) RGD PMID:17130295 NCBI chr10:13,218,728...13,220,159 JBrowse link
G Cxadr CXADR, Ig-like cell adhesion molecule involved_in
acts_upstream_of_or_within 		ISS
ISO 		GO_REF:0000024
MGI:3711226 (PMID:16543498) 		UniProt
RGD		 PMID:16543498 GO_REF:0000024 NCBI chr11:30,469,778...30,516,990
Ensembl chr11:16,982,860...17,030,046 		JBrowse link
G Flna filamin A involved_in ISO (PMID:17172441) RGD PMID:17172441 NCBI chr  X:157,159,051...157,185,559
Ensembl chr  X:152,007,758...152,031,052 		JBrowse link
G Gja1 gap junction protein, alpha 1 acts_upstream_of_or_within ISO MGI:1857177 (PMID:9620080) RGD PMID:9620080 NCBI chr20:36,302,490...36,315,010
Ensembl chr20:35,755,991...35,768,582 		JBrowse link
G Heg1 heart development protein with EGF-like domains 1 acts_upstream_of_or_within ISO MGI:3838392 (PMID:19151727) RGD PMID:19151727 NCBI chr11:80,512,096...80,600,150
Ensembl chr11:66,957,190...67,095,051 		JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha IDA RGD PMID:12749857 RGD:1625017 NCBI chr 3:172,606,220...172,667,758
Ensembl chr 3:152,186,787...152,248,320 		JBrowse link
G Lims1 LIM zinc finger domain containing 1 involved_in
acts_upstream_of_or_within 		IBA
ISO 		GO_REF:0000033
MGI:2385067 (PMID:19652092) 		GO_Central
RGD		 PMID:19652092 GO_REF:0000033 NCBI chr20:26,851,364...26,961,607
Ensembl chr20:26,309,895...26,418,500 		JBrowse link
G Lims2 LIM zinc finger domain containing 2 involved_in
acts_upstream_of_or_within 		IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
MGI:1195263 (PMID:19652092) 		GO_Central
Ensembl
RGD		 PMID:19652092 GO_REF:0000033 GO_REF:0000107 NCBI chr18:23,828,164...23,866,363
Ensembl chr18:23,553,937...23,592,137 		JBrowse link
G Marveld2 MARVEL domain containing 2 acts_upstream_of_or_within ISO
IEA 		(PMID:20164257)
GO_REF:0000107
MGI:5550095 (PMID:16365161), (PMID:23979167) 		RGD
Ensembl		 PMID:16365161 PMID:20164257 PMID:23979167 GO_REF:0000107 NCBI chr 2:33,474,750...33,498,225
Ensembl chr 2:31,657,220...31,764,150 		JBrowse link
G Marveld3 MARVEL domain containing 3 acts_upstream_of_or_within ISO (PMID:20164257) RGD PMID:20164257 NCBI chr19:54,818,180...54,832,871
Ensembl chr19:37,905,638...37,923,420 		JBrowse link
G Nf2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor acts_upstream_of_or_within ISO
IEA 		MGI:1857941 (PMID:12695331)
GO_REF:0000107 		RGD
Ensembl		 PMID:12695331 GO_REF:0000107 NCBI chr14:83,850,894...83,934,263
Ensembl chr14:79,627,399...79,710,667 		JBrowse link
G Ocln occludin acts_upstream_of_or_within ISO (PMID:20164257) RGD PMID:20164257 NCBI chr 2:33,391,303...33,442,207
Ensembl chr 2:31,657,220...31,764,150 		JBrowse link
G Pkhd1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin acts_upstream_of_positive_effect ISO
IEA 		(PMID:20875407)
GO_REF:0000107 		RGD
Ensembl		 PMID:20875407 GO_REF:0000107 NCBI chr 9:30,040,466...30,533,834
Ensembl chr 9:22,549,513...23,037,381 		JBrowse link
G Prkci protein kinase C, iota involved_in ISO
IEA 		(PMID:11257119)
GO_REF:0000107 		RGD
Ensembl		 PMID:11257119 GO_REF:0000107 NCBI chr 2:114,250,398...114,310,784
Ensembl chr 2:112,321,929...112,382,352 		JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO MGI:2663662|MGI:2663669 (PMID:20016102) RGD PMID:20016102 NCBI chr12:16,150,411...16,170,864
Ensembl chr12:11,036,698...11,057,251 		JBrowse link
G Smad3 SMAD family member 3 involved_in ISO
IEA 		(PMID:18505915)
GO_REF:0000107 		RGD
Ensembl		 PMID:18505915 GO_REF:0000107 NCBI chr 8:73,022,204...73,132,324
Ensembl chr 8:64,110,039...64,236,960 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:18505915) 		UniProt
Ensembl
RGD		 PMID:18505915 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:90,324,312...90,340,627
Ensembl chr 1:81,196,532...81,212,847 		JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:18505915) 		UniProt
Ensembl
RGD		 PMID:18505915 GO_REF:0000024 GO_REF:0000107 NCBI chr13:100,691,540...100,793,227
Ensembl chr13:98,160,087...98,261,405 		JBrowse link
G Tgfb3 transforming growth factor, beta 3 involved_in ISS
ISO 		GO_REF:0000024
(PMID:18505915) 		AgBase
RGD		 PMID:18505915 GO_REF:0000024 NCBI chr 6:111,435,170...111,457,646
Ensembl chr 6:105,704,236...105,726,564 		JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO
IBA 		(PMID:25753039)
GO_REF:0000033 		RGD
GO_Central		 PMID:25753039 GO_REF:0000033 NCBI chr 1:128,260,330...128,505,018
Ensembl chr 1:118,849,838...119,094,432 		JBrowse link
G Tjp2 tight junction protein 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:231,136,218...231,264,750
Ensembl chr 1:221,709,745...221,838,295 		JBrowse link
G Tjp3 tight junction protein 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:9,078,757...9,097,003
Ensembl chr 7:8,432,811...8,446,279 		JBrowse link
G Tmigd1 transmembrane and immunoglobulin domain containing 1 acts_upstream_of_or_within ISO
IEA 		MGI:6506201 (PMID:33129760)
GO_REF:0000107 		RGD
Ensembl		 PMID:33129760 GO_REF:0000107 NCBI chr10:62,234,764...62,249,169
Ensembl chr10:61,736,462...61,751,025 		JBrowse link
G Xirp2 xin actin-binding repeat containing 2 acts_upstream_of_or_within ISO MGI:4453315 (PMID:20360251) RGD PMID:20360251 NCBI chr 3:72,534,175...72,621,056
Ensembl chr 3:51,870,092...52,213,091 		JBrowse link
adherens junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin, beta involved_in ISO
IEA 		(PMID:22855531)
GO_REF:0000107 		RGD
Ensembl		 PMID:22855531 GO_REF:0000107 NCBI chr12:16,776,664...16,779,634
Ensembl chr12:11,663,109...11,672,877 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in ISO
IEA
ISS 		(PMID:20086044), (PMID:20123964)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:20086044 PMID:20123964 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Dsg3 desmoglein 3 involved_in ISO
IEA 		(PMID:31835537)
GO_REF:0000107 		RGD
Ensembl		 PMID:31835537 GO_REF:0000107 NCBI chr18:12,074,321...12,105,954
Ensembl chr18:11,798,900...11,830,818 		JBrowse link
G Fer FER tyrosine kinase IEP RGD PMID:12700184 RGD:2291909 NCBI chr 9:110,967,317...111,274,315
Ensembl chr 9:103,520,493...103,821,451 		JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 involved_in IEA
ISO 		GO_REF:0000107
(PMID:23565059) 		Ensembl
RGD		 PMID:23565059 GO_REF:0000107 NCBI chr 2:193,937,261...193,988,247
Ensembl chr 2:191,248,817...191,298,902 		JBrowse link
G Jam3 junctional adhesion molecule 3 involved_in ISO
IEA 		(PMID:19060272)
GO_REF:0000107 		RGD
Ensembl		 PMID:19060272 GO_REF:0000107 NCBI chr 8:33,767,606...33,828,451
Ensembl chr 8:25,507,057...25,569,355 		JBrowse link
G Pak2 p21 (RAC1) activated kinase 2 involved_in ISO
IEA 		(PMID:25753039)
GO_REF:0000107 		RGD
Ensembl		 PMID:25753039 GO_REF:0000107 NCBI chr11:82,212,896...82,273,803
Ensembl chr11:68,707,969...68,768,816 		JBrowse link
G Ramp2 receptor activity modifying protein 2 involved_in ISS
ISO 		GO_REF:0000024
(PMID:18097473) 		UniProt
RGD		 PMID:18097473 GO_REF:0000024 NCBI chr10:86,689,148...86,690,956
Ensembl chr10:86,188,812...86,231,829 		JBrowse link
G Smad7 SMAD family member 7 involved_in ISO
IEA 		(PMID:18593713)
GO_REF:0000107 		RGD
Ensembl		 PMID:18593713 GO_REF:0000107 NCBI chr18:71,263,508...71,291,849
Ensembl chr18:68,988,429...69,016,765 		JBrowse link
G Tbcd tubulin folding cofactor D involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:107,215,626...107,372,398
Ensembl chr10:106,717,367...106,874,122 		JBrowse link
G Vcl vinculin involved_in IEA
ISO 		GO_REF:0000107
(PMID:20086044) 		Ensembl
RGD		 PMID:20086044 GO_REF:0000107 NCBI chr15:3,315,069...3,404,891
Ensembl chr15:3,265,815...3,355,606 		JBrowse link
G Zfp703 zinc finger protein 703 involved_in ISO
IEA 		(PMID:21317240)
GO_REF:0000107 		RGD
Ensembl		 PMID:21317240 GO_REF:0000107 NCBI chr16:71,779,340...71,783,510
Ensembl chr16:65,076,507...65,080,677 		JBrowse link
adherens junction disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fer FER tyrosine kinase IEP RGD PMID:12700184 RGD:2291909 NCBI chr 9:110,967,317...111,274,315
Ensembl chr 9:103,520,493...103,821,451 		JBrowse link
adherens junction maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afdn afadin, adherens junction formation factor acts_upstream_of_or_within ISO (PMID:25100583) RGD PMID:25100583 NCBI chr 1:58,041,065...58,170,505
Ensembl chr 1:53,905,373...54,034,216 		JBrowse link
G Fermt2 FERM domain containing kindlin 2 involved_in ISO
IEA 		(PMID:28799653)
GO_REF:0000107 		RGD
Ensembl		 PMID:28799653 GO_REF:0000107 NCBI chr15:21,162,603...21,257,995
Ensembl chr15:18,682,927...18,751,811 		JBrowse link
G Inava innate immunity activator involved_in ISO
IEA
IBA 		(PMID:29420262)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:29420262 GO_REF:0000033 GO_REF:0000107 NCBI chr13:50,218,149...50,238,430
Ensembl chr13:47,666,447...47,686,729 		JBrowse link
G Mtss1 MTSS I-BAR domain containing 1 involved_in
acts_upstream_of_or_within 		IBA
ISO 		GO_REF:0000033
MGI:5319219 (PMID:21406566) 		GO_Central
RGD		 PMID:21406566 GO_REF:0000033 NCBI chr 7:92,378,228...92,517,444
Ensembl chr 7:90,488,754...90,627,968 		JBrowse link
G Pkp2 plakophilin 2 IMP RGD PMID:18261826 RGD:6784508 NCBI chr11:98,165,974...98,231,916
Ensembl chr11:84,661,783...84,727,730 		JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr 1:128,260,330...128,505,018
Ensembl chr 1:118,849,838...119,094,432 		JBrowse link
adherens junction organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam10 ADAM metallopeptidase domain 10 involved_in IEA
ISO 		GO_REF:0000107
(PMID:30639848) 		Ensembl
RGD		 PMID:30639848 GO_REF:0000107 NCBI chr 8:80,226,862...80,358,728
Ensembl chr 8:71,345,837...71,477,889 		JBrowse link
G Cdc42 cell division cycle 42 acts_upstream_of_or_within ISO MGI:3619134 (PMID:16892058) RGD PMID:16892058 NCBI chr 5:154,838,478...154,876,629
Ensembl chr 5:149,553,724...149,593,111 		JBrowse link
G Cdh1 cadherin 1 involved_in ISO
IEA
IBA 		(PMID:21724833)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:21724833 GO_REF:0000033 GO_REF:0000107 NCBI chr19:51,402,178...51,471,572
Ensembl chr19:34,492,371...34,561,775 		JBrowse link
G Cdh10 cadherin 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:70,355,521...70,577,880
Ensembl chr 2:68,628,780...68,850,995 		JBrowse link
G Cdh11 cadherin 11 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:2,152,961...2,312,140
Ensembl chr19:2,148,458...2,304,272 		JBrowse link
G Cdh12 cadherin 12 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:72,201,859...73,436,039
Ensembl chr 2:70,475,043...71,700,572 		JBrowse link
G Cdh13 cadherin 13 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:63,258,251...64,296,122
Ensembl chr19:46,349,430...47,387,459 		JBrowse link
G Cdh15 cadherin 15 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:67,812,169...67,834,986
Ensembl chr19:50,903,638...50,927,105 		JBrowse link
G Cdh17 cadherin 17 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:30,024,544...30,112,226
Ensembl chr 5:25,262,758...25,314,884 		JBrowse link
G Cdh18 cadherin 18 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:74,548,681...75,550,720
Ensembl chr 2:73,345,005...73,820,138 		JBrowse link
G Cdh19 cadherin 19 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:28,450,361...28,561,932
Ensembl chr13:27,936,668...28,019,310 		JBrowse link
G Cdh2 cadherin 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr18:8,051,097...8,265,288
Ensembl chr18:7,776,704...7,990,167 		JBrowse link
G Cdh20 cadherin 20 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:21,252,272...21,583,526
Ensembl chr13:20,738,081...21,068,676 		JBrowse link
G Cdh22 cadherin 22 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:174,264,869...174,389,940
Ensembl chr 3:153,845,787...153,970,588 		JBrowse link
G Cdh24 cadherin 24 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:32,061,588...32,071,323
Ensembl chr15:28,091,637...28,101,340 		JBrowse link
G Cdh26 cadherin 26 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:185,898,185...185,950,892
Ensembl chr 3:165,520,439...165,572,149 		JBrowse link
G Cdh3 cadherin 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:51,303,414...51,353,900
Ensembl chr19:34,393,727...34,444,084 		JBrowse link
G Cdh5 cadherin 5 involved_in ISO
IEA
IBA 		(PMID:26598555)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:26598555 GO_REF:0000033 GO_REF:0000107 NCBI chr19:821,875...860,931
Ensembl chr19:815,411...854,368 		JBrowse link
G Cdh6 cadherin 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:63,801,630...63,952,309
Ensembl chr 2:62,079,137...62,225,228 		JBrowse link
G Cdh7 cadherin 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:27,186,223...27,336,076
Ensembl chr13:26,672,484...26,819,846 		JBrowse link
G Cdh8 cadherin 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:5,494,552...5,901,950
Ensembl chr19:5,494,174...5,895,669 		JBrowse link
G Cdh9 cadherin 9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:67,954,708...68,094,371
Ensembl chr 2:66,228,117...66,367,121 		JBrowse link
G Csk C-terminal Src kinase involved_in IEP
IBA 		GO_REF:0000033 GO_Central
RGD		 PMID:15389520 GO_REF:0000033, RGD:5134367 NCBI chr 8:66,925,650...66,944,861
Ensembl chr 8:58,029,749...58,048,292 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within ISO
IEA 		(PMID:19129494)
GO_REF:0000107 		RGD
Ensembl		 PMID:19129494 GO_REF:0000107 NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Dsp desmoplakin acts_upstream_of_or_within ISO
IEA 		MGI:1926500|MGI:2156542 (PMID:11781569)
GO_REF:0000107 		RGD
Ensembl		 PMID:11781569 GO_REF:0000107 NCBI chr17:26,829,153...26,877,419
Ensembl chr17:26,623,588...26,671,800 		JBrowse link
G Efnb2 ephrin B2 involved_in ISO
IEA 		(PMID:30639848)
GO_REF:0000107 		RGD
Ensembl		 PMID:30639848 GO_REF:0000107 NCBI chr16:87,485,215...87,529,224
Ensembl chr16:80,783,417...80,824,391 		JBrowse link
G Epha4 Eph receptor A4 involved_in ISO
IEA 		(PMID:30639848)
GO_REF:0000107 		RGD
Ensembl		 PMID:30639848 GO_REF:0000107 NCBI chr 9:86,263,982...86,406,744
Ensembl chr 9:78,815,460...78,958,139 		JBrowse link
G Numb NUMB, endocytic adaptor protein acts_upstream_of_or_within ISO
IEA 		MGI:894702 (PMID:17589506)
GO_REF:0000107 		RGD
Ensembl		 PMID:17589506 GO_REF:0000107 NCBI chr 6:109,162,499...109,284,527
Ensembl chr 6:103,431,400...103,553,354 		JBrowse link
G Numbl NUMB-like, endocytic adaptor protein acts_upstream_of_or_within ISO
IEA 		MGI:107423 (PMID:17589506)
GO_REF:0000107 		RGD
Ensembl		 PMID:17589506 GO_REF:0000107 NCBI chr 1:91,677,437...91,701,415
Ensembl chr 1:82,550,054...82,573,776 		JBrowse link
G Plec plectin involved_in ISO
IEA 		MGI:3721885 (PMID:26519478)
GO_REF:0000107 		RGD
Ensembl		 PMID:26519478 GO_REF:0000107 NCBI chr 7:109,768,447...109,829,798
Ensembl chr 7:107,887,764...107,945,467 		JBrowse link
G Specc1l sperm antigen with calponin homology and coiled-coil domains 1-like acts_upstream_of_or_within ISO
IEA 		MGI:4124253 (PMID:26787558)
GO_REF:0000107 		RGD
Ensembl		 PMID:26787558 GO_REF:0000107 NCBI chr20:13,337,399...13,443,080
Ensembl chr20:13,339,692...13,443,665 		JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase IEP RGD PMID:15389520 RGD:5134367 NCBI chr 3:166,511,616...166,559,463
Ensembl chr 3:146,091,841...146,139,476 		JBrowse link
apical junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cldn19 claudin 19 acts_upstream_of_or_within ISO
IEA 		MGI:3583804 (PMID:15883201)
GO_REF:0000107 		RGD
Ensembl		 PMID:15883201 GO_REF:0000107 NCBI chr 5:138,148,234...138,155,672
Ensembl chr 5:132,863,267...132,868,227 		JBrowse link
G Ctnna1 catenin alpha 1 acts_upstream_of_or_within ISO
IEA 		MGI:2176173|MGI:2677796 (PMID:16543460), (PMID:22411810)
GO_REF:0000107 		RGD
Ensembl		 PMID:16543460 PMID:22411810 GO_REF:0000107 NCBI chr18:27,002,330...27,135,009
Ensembl chr18:26,728,485...26,860,910 		JBrowse link
G Fbf1 Fas binding factor 1 involved_in ISO
IEA 		(PMID:18838552)
GO_REF:0000107 		RGD
Ensembl		 PMID:18838552 GO_REF:0000107 NCBI chr10:101,874,661...101,900,497
Ensembl chr10:101,375,775...101,401,644 		JBrowse link
G Pkn2 protein kinase N2 involved_in ISS
ISO 		GO_REF:0000024
(PMID:20974804) 		UniProt
RGD		 PMID:20974804 GO_REF:0000024 NCBI chr 2:234,454,001...234,559,369
Ensembl chr 2:231,793,584...231,898,953 		JBrowse link
G Rhoa ras homolog family member A involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:20974804)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:20974804 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:117,870,548...117,904,303
Ensembl chr 8:108,991,954...109,025,746 		JBrowse link
G Rhoc ras homolog family member C involved_in ISO
IEA 		(PMID:20974804)
GO_REF:0000107 		RGD
Ensembl		 PMID:20974804 GO_REF:0000107 NCBI chr 2:194,975,586...194,981,637
Ensembl chr 2:192,287,130...192,295,306 		JBrowse link
G Vcl vinculin involved_in ISO
IEA 		(PMID:9700171)
GO_REF:0000107 		RGD
Ensembl		 PMID:9700171 GO_REF:0000107 NCBI chr15:3,315,069...3,404,891
Ensembl chr15:3,265,815...3,355,606 		JBrowse link
G Wdr1 WD repeat domain 1 involved_in ISO
IEA 		(PMID:25792565)
GO_REF:0000107 		RGD
Ensembl		 PMID:25792565 GO_REF:0000107 NCBI chr14:76,470,238...76,504,086
Ensembl chr14:72,257,956...72,291,766 		JBrowse link
bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn4 actinin alpha 4 involved_in ISO (PMID:18332111) RGD PMID:18332111 NCBI chr 1:93,310,294...93,379,369
Ensembl chr 1:84,182,788...84,251,847 		JBrowse link
G Afdn afadin, adherens junction formation factor involved_in ISO (PMID:27815408) RGD PMID:27815408 NCBI chr 1:58,041,065...58,170,505
Ensembl chr 1:53,905,373...54,034,216 		JBrowse link
G Alox12b arachidonate 12-lipoxygenase, 12R type NOT|involved_in ISO (PMID:17403930) RGD PMID:17403930 NCBI chr10:54,361,898...54,373,776
Ensembl chr10:53,863,060...53,874,938 		JBrowse link
G Aloxe3 arachidonate epidermal lipoxygenase 3 NOT|involved_in ISO (PMID:22832496) RGD PMID:22832496 NCBI chr10:54,329,224...54,353,167
Ensembl chr10:53,831,264...53,854,328 		JBrowse link
G Arl2 ARF like GTPase 2 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:212,863,422...212,875,425
Ensembl chr 1:203,434,129...203,446,119 		JBrowse link
G Cdh1 cadherin 1 acts_upstream_of_or_within ISO MGI:2389020 (PMID:15775979) RGD PMID:15775979 NCBI chr19:51,402,178...51,471,572
Ensembl chr19:34,492,371...34,561,775 		JBrowse link
G Cdh5 cadherin 5 involved_in ISO
IEA 		(PMID:25753039)
GO_REF:0000107 		RGD
Ensembl		 PMID:25753039 GO_REF:0000107 NCBI chr19:821,875...860,931
Ensembl chr19:815,411...854,368 		JBrowse link
G Cgn cingulin acts_upstream_of_or_within ISO (PMID:24385485) RGD PMID:24385485 NCBI chr 2:184,997,425...185,024,785
Ensembl chr 2:182,308,714...182,334,645 		JBrowse link
G Cldn1 claudin 1 involved_in ISO
IEA
IBA 		(PMID:25849148), (PMID:26607202)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:25849148 PMID:26607202 GO_REF:0000033 GO_REF:0000107 NCBI chr11:87,926,376...87,941,533
Ensembl chr11:74,421,569...74,436,724 		JBrowse link
G Cldn10 claudin 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:102,269,858...102,361,589
Ensembl chr15:95,862,760...95,954,526 		JBrowse link
G Cldn11 claudin 11 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:114,136,234...114,149,539
Ensembl chr 2:112,207,745...112,221,050 		JBrowse link
G Cldn14 claudin 14 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:46,701,940...46,799,049
Ensembl chr11:33,232,220...33,329,171 		JBrowse link
G Cldn15 claudin 15 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:25,334,849...25,345,104
Ensembl chr12:19,698,337...19,706,819 		JBrowse link
G Cldn16 claudin 16 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:87,795,106...87,814,396
Ensembl chr11:74,290,298...74,309,588 		JBrowse link
G Cldn17 claudin 17 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:41,313,675...41,314,851
Ensembl chr11:27,827,454...27,828,630 		JBrowse link
G Cldn18 claudin 18 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:109,125,819...109,145,110
Ensembl chr 8:100,247,633...100,273,351 		JBrowse link
G Cldn19 claudin 19 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:138,148,234...138,155,672
Ensembl chr 5:132,863,267...132,868,227 		JBrowse link
G Cldn2 claudin 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:108,248,383...108,258,847
Ensembl chr  X:103,459,780...103,474,838 		JBrowse link
G Cldn20 claudin 20 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:46,539,039...46,539,698
Ensembl chr 1:44,133,769...44,134,428 		JBrowse link
G Cldn22 claudin 22 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:51,155,058...51,156,084
Ensembl chr16:44,422,345...44,423,354 		JBrowse link
G Cldn24 claudin 24 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:51,157,524...51,158,186
Ensembl chr16:44,424,810...44,425,472 		JBrowse link
G Cldn25 claudin 25 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 8:58,288,411...58,289,145
Ensembl chr 8:49,391,975...49,392,664 		JBrowse link
G Cldn3 claudin 3 involved_in IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
(PMID:20655293), (PMID:25849148) 		GO_Central
Ensembl
RGD		 PMID:20655293 PMID:25849148 GO_REF:0000033 GO_REF:0000107 NCBI chr12:27,345,075...27,346,547
Ensembl chr12:21,708,398...21,711,001 		JBrowse link
G Cldn34a claudin 34A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:25,164,586...25,233,074
Ensembl chr  X:21,736,419...21,737,054 		JBrowse link
G Cldn34b claudin 34B involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:44,396,219...44,402,241
Ensembl chr  X:40,517,517...40,523,506 		JBrowse link
G Cldn34b4 claudin 34B4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:44,329,083...44,362,148
Ensembl chr  X:40,450,366...40,483,426 		JBrowse link
G Cldn34c4 claudin 34C4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:94,391,092...94,396,766
Ensembl chr  X:90,129,744...90,135,369 		JBrowse link
G Cldn34d claudin 34D involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:44,473,389...44,481,870
Ensembl chr  X:40,594,666...40,603,146 		JBrowse link
G Cldn34e claudin 34E involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:45,620,496...45,627,344
Ensembl chr  X:41,742,297...41,742,935 		JBrowse link
G Cldn4 claudin 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr12:27,388,160...27,389,958
Ensembl chr12:21,751,331...21,753,436 		JBrowse link
G Cldn5 claudin 5 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:95,717,172...95,718,598
Ensembl chr11:82,211,475...82,214,992 		JBrowse link
G Cldn6 claudin 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:13,213,837...13,218,578
Ensembl chr10:12,709,960...12,715,973 		JBrowse link
G Cldn7 claudin 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:55,188,670...55,190,871
Ensembl chr10:54,689,987...54,692,171 		JBrowse link
G Cldn8 claudin 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:41,362,081...41,364,330
Ensembl chr11:27,875,692...27,878,513 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in ISO (PMID:8636221) RGD PMID:8636221 NCBI chr 8:129,517,576...129,544,661
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in ISO
IEA 		(PMID:17332497)
GO_REF:0000107 		RGD
Ensembl		 PMID:17332497 GO_REF:0000107 NCBI chr11:82,416,853...82,607,797
Ensembl chr11:68,911,883...69,102,689 		JBrowse link
G Ect2 epithelial cell transforming 2 involved_in ISO
IEA 		(PMID:15254234)
GO_REF:0000107 		RGD
Ensembl		 PMID:15254234 GO_REF:0000107 NCBI chr 2:111,904,522...111,966,786
Ensembl chr 2:109,975,813...110,037,911 		JBrowse link
G Esam endothelial cell adhesion molecule involved_in ISO (PMID:26607202) RGD PMID:26607202 NCBI chr 8:45,426,985...45,437,976
Ensembl chr 8:37,238,287...37,249,215 		JBrowse link
G Frmpd2 FERM and PDZ domain containing 2 involved_in ISO (PMID:19706687) RGD PMID:19706687 NCBI chr16:8,763,889...8,883,558
Ensembl chr16:8,757,705...8,877,303 		JBrowse link
G Grhl2 grainyhead-like transcription factor 2 involved_in ISO
IEA 		(PMID:25152456)
GO_REF:0000107 		RGD
Ensembl		 PMID:25152456 GO_REF:0000107 NCBI chr 7:70,280,360...70,415,277
Ensembl chr 7:68,400,477...68,530,258 		JBrowse link
G Itgb1 integrin subunit beta 1 IMP RGD PMID:18579774 RGD:2325293 NCBI chr19:73,602,277...73,650,271
Ensembl chr19:56,705,171...56,753,195 		JBrowse link
G Marveld2 MARVEL domain containing 2 involved_in ISO
IEA 		(PMID:20164257), (PMID:23073616)
GO_REF:0000107 		RGD
Ensembl		 PMID:20164257 PMID:23073616 GO_REF:0000107 NCBI chr 2:33,474,750...33,498,225
Ensembl chr 2:31,657,220...31,764,150 		JBrowse link
G Marveld3 MARVEL domain containing 3 involved_in ISO (PMID:20164257) RGD PMID:20164257 NCBI chr19:54,818,180...54,832,871
Ensembl chr19:37,905,638...37,923,420 		JBrowse link
G Micall2 MICAL-like 2 involved_in ISS
ISO 		GO_REF:0000024
(PMID:18094055) 		UniProt
RGD		 PMID:18094055 GO_REF:0000024 NCBI chr12:20,013,037...20,041,795
Ensembl chr12:14,899,157...14,927,946 		JBrowse link
G Mpp7 MAGUK p55 scaffold protein 7 involved_in ISO
IEA 		(PMID:17332497)
GO_REF:0000107 		RGD
Ensembl		 PMID:17332497 GO_REF:0000107 NCBI chr17:60,135,096...60,401,814
Ensembl chr17:55,442,696...55,706,748 		JBrowse link
G Mtdh metadherin IEP RGD PMID:15383321 RGD:1359738 NCBI chr 7:67,192,592...67,250,819
Ensembl chr 7:65,306,400...65,364,413 		JBrowse link
G Ocel1 occludin/ELL domain containing 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:18,076,428...18,079,068
Ensembl chr16:18,043,309...18,045,078 		JBrowse link
G Ocln occludin involved_in ISO
IEA
IBA 		(PMID:20164257), (PMID:26607202)
GO_REF:0000002
GO_REF:0000033 		RGD
InterPro
GO_Central		 PMID:20164257 PMID:26607202 GO_REF:0000002 GO_REF:0000033 NCBI chr 2:33,391,303...33,442,207
Ensembl chr 2:31,657,220...31,764,150 		JBrowse link
G Pak2 p21 (RAC1) activated kinase 2 involved_in ISO
IEA 		(PMID:25753039)
GO_REF:0000107 		RGD
Ensembl		 PMID:25753039 GO_REF:0000107 NCBI chr11:82,212,896...82,273,803
Ensembl chr11:68,707,969...68,768,816 		JBrowse link
G Pard3 par-3 family cell polarity regulator involved_in IMP PMID:18082612 UniProt PMID:18082612 RGD:8553352 NCBI chr19:71,977,420...72,527,273
Ensembl chr19:55,080,282...55,629,778 		JBrowse link
G Pdcd6ip programmed cell death 6 interacting protein involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:27336173)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:27336173 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:122,469,223...122,524,993
Ensembl chr 8:113,590,998...113,646,773 		JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 involved_in ISO
IEA 		(PMID:26607202)
GO_REF:0000107 		RGD
Ensembl		 PMID:26607202 GO_REF:0000107 NCBI chr10:92,090,263...92,152,002
Ensembl chr10:91,590,521...91,652,116 		JBrowse link
G Pof1b POF1B, actin binding protein involved_in ISO
IEA
IBA 		(PMID:21940798)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:21940798 GO_REF:0000033 GO_REF:0000107 NCBI chr  X:81,875,348...81,942,046
Ensembl chr  X:77,683,128...77,749,688 		JBrowse link
G Rab13 RAB13, member RAS oncogene family involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:12058051), (PMID:15096524) 		UniProt
Ensembl
RGD		 PMID:12058051 PMID:15096524 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:177,972,535...177,977,679
Ensembl chr 2:175,675,005...175,680,036 		JBrowse link
G Ramp2 receptor activity modifying protein 2 involved_in ISO
ISS 		(PMID:18097473)
GO_REF:0000024 		RGD
UniProt		 PMID:18097473 GO_REF:0000024 NCBI chr10:86,689,148...86,690,956
Ensembl chr10:86,188,812...86,231,829 		JBrowse link
G Samt1 spermatogenesis associated multipass transmembrane protein 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:26,362,766...26,427,634
Ensembl chr  X:22,866,303...22,931,169 		JBrowse link
G Samt2 spermatogenesis associated multipass transmembrane protein 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:26,845,413...26,898,389
Ensembl chr  X:23,342,423...23,358,120 		JBrowse link
G Samt2l1 spermatogenesis associated multipass transmembrane protein 2 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:25,930,744...25,933,712
Ensembl chr  X:22,434,315...22,437,190 		JBrowse link
G Samt2l2 spermatogenesis associated multipass transmembrane protein 2 like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:25,873,151...25,876,071
Ensembl chr  X:22,376,726...22,379,593 		JBrowse link
G Samt2l3 spermatogenesis associated multipass transmembrane protein 2 like 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:25,294,178...25,299,103
Ensembl chr  X:21,798,482...21,802,166 		JBrowse link
G Samt3 spermatogenesis associated multipass transmembrane protein 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:54,522,644...54,525,478
Ensembl chr  X:50,571,864...50,574,716 		JBrowse link
G Samt4 spermatogenesis associated multipass transmembrane protein 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:26,173,282...26,176,055
Ensembl chr  X:22,676,825...22,679,569 		JBrowse link
G Slc39a9 solute carrier family 39, member 9 involved_in IMP
IDA 		PMID:27164415
PMID:35625396 		UniProt PMID:27164415 PMID:35625396 RGD:155663545, RGD:155663535 NCBI chr 6:106,022,858...106,061,734
Ensembl chr 6:100,291,573...100,330,408 		JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO
IEA 		MGI:2445832|MGI:3522206 (PMID:20047077)
GO_REF:0000107 		RGD
Ensembl		 PMID:20047077 GO_REF:0000107 NCBI chr 9:21,924,050...21,933,338
Ensembl chr 9:14,426,472...14,435,733 		JBrowse link
G Tbcd tubulin folding cofactor D involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:107,215,626...107,372,398
Ensembl chr10:106,717,367...106,874,122 		JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO (PMID:8636221) RGD PMID:8636221 NCBI chr 1:128,260,330...128,505,018
Ensembl chr 1:118,849,838...119,094,432 		JBrowse link
G Wnt11 Wnt family member 11 acts_upstream_of_or_within ISO
IEA 		MGI:2665014 (PMID:17767158)
GO_REF:0000107 		RGD
Ensembl		 PMID:17767158 GO_REF:0000107 NCBI chr 1:162,545,660...162,565,456
Ensembl chr 1:153,138,197...153,154,294 		JBrowse link
cell-cell junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh1 cadherin 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:51,402,178...51,471,572
Ensembl chr19:34,492,371...34,561,775 		JBrowse link
G Cdh10 cadherin 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:70,355,521...70,577,880
Ensembl chr 2:68,628,780...68,850,995 		JBrowse link
G Cdh11 cadherin 11 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:2,152,961...2,312,140
Ensembl chr19:2,148,458...2,304,272 		JBrowse link
G Cdh12 cadherin 12 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:72,201,859...73,436,039
Ensembl chr 2:70,475,043...71,700,572 		JBrowse link
G Cdh13 cadherin 13 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:63,258,251...64,296,122
Ensembl chr19:46,349,430...47,387,459 		JBrowse link
G Cdh15 cadherin 15 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:67,812,169...67,834,986
Ensembl chr19:50,903,638...50,927,105 		JBrowse link
G Cdh17 cadherin 17 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:30,024,544...30,112,226
Ensembl chr 5:25,262,758...25,314,884 		JBrowse link
G Cdh18 cadherin 18 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:74,548,681...75,550,720
Ensembl chr 2:73,345,005...73,820,138 		JBrowse link
G Cdh19 cadherin 19 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:28,450,361...28,561,932
Ensembl chr13:27,936,668...28,019,310 		JBrowse link
G Cdh2 cadherin 2 involved_in IEA
ISO
IBA
ISS 		GO_REF:0000107
(PMID:26750727)
GO_REF:0000033
GO_REF:0000024 		Ensembl
RGD
GO_Central
UniProt		 PMID:26750727 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr18:8,051,097...8,265,288
Ensembl chr18:7,776,704...7,990,167 		JBrowse link
G Cdh20 cadherin 20 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:21,252,272...21,583,526
Ensembl chr13:20,738,081...21,068,676 		JBrowse link
G Cdh22 cadherin 22 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:174,264,869...174,389,940
Ensembl chr 3:153,845,787...153,970,588 		JBrowse link
G Cdh24 cadherin 24 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:32,061,588...32,071,323
Ensembl chr15:28,091,637...28,101,340 		JBrowse link
G Cdh26 cadherin 26 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:185,898,185...185,950,892
Ensembl chr 3:165,520,439...165,572,149 		JBrowse link
G Cdh3 cadherin 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:51,303,414...51,353,900
Ensembl chr19:34,393,727...34,444,084 		JBrowse link
G Cdh5 cadherin 5 involved_in ISO
IEA
IBA 		(PMID:23288152)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:23288152 GO_REF:0000033 GO_REF:0000107 NCBI chr19:821,875...860,931
Ensembl chr19:815,411...854,368 		JBrowse link
G Cdh6 cadherin 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:63,801,630...63,952,309
Ensembl chr 2:62,079,137...62,225,228 		JBrowse link
G Cdh7 cadherin 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr13:27,186,223...27,336,076
Ensembl chr13:26,672,484...26,819,846 		JBrowse link
G Cdh8 cadherin 8 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:5,494,552...5,901,950
Ensembl chr19:5,494,174...5,895,669 		JBrowse link
G Cdh9 cadherin 9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:67,954,708...68,094,371
Ensembl chr 2:66,228,117...66,367,121 		JBrowse link
G Cldn5 claudin 5 involved_in ISO
IEA 		(PMID:23288152)
GO_REF:0000107 		RGD
Ensembl		 PMID:23288152 GO_REF:0000107 NCBI chr11:95,717,172...95,718,598
Ensembl chr11:82,211,475...82,214,992 		JBrowse link
G Flcn folliculin involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:22965878) 		UniProt
Ensembl
RGD		 PMID:22965878 GO_REF:0000024 GO_REF:0000107 NCBI chr10:45,088,164...45,107,581
Ensembl chr10:44,588,624...44,607,769 		JBrowse link
G Fscn1 fascin actin-bundling protein 1 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:9571235) 		UniProt
Ensembl
RGD		 PMID:9571235 GO_REF:0000024 GO_REF:0000107 NCBI chr12:16,710,601...16,723,734
Ensembl chr12:11,597,048...11,610,211 		JBrowse link
G Hdac7 histone deacetylase 7 acts_upstream_of_or_within ISO
IEA 		MGI:3693627 (PMID:16873063)
GO_REF:0000107 		RGD
Ensembl		 PMID:16873063 GO_REF:0000107 NCBI chr 7:130,803,013...130,841,181
Ensembl chr 7:128,923,920...128,962,072 		JBrowse link
G Lin7b lin-7 homolog B, crumbs cell polarity complex component NAS RGD PMID:10362251 RGD:633233 NCBI chr 1:104,983,368...104,986,795
Ensembl chr 1:95,846,243...95,849,977 		JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 involved_in IEA
ISO 		GO_REF:0000107
(PMID:16473946) 		Ensembl
RGD		 PMID:16473946 GO_REF:0000107 NCBI chr 7:25,733,471...25,829,440
Ensembl chr 7:23,846,122...23,942,047 		JBrowse link
G Pkp4 plakophilin 4 involved_in ISO
IEA 		(PMID:22965878)
GO_REF:0000107 		RGD
Ensembl		 PMID:22965878 GO_REF:0000107 NCBI chr 3:64,040,995...64,244,586
Ensembl chr 3:43,631,880...43,835,474 		JBrowse link
G Trpv4 transient receptor potential cation channel, subfamily V, member 4 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:20413591) 		UniProt
Ensembl
RGD		 PMID:20413591 GO_REF:0000024 GO_REF:0000107 NCBI chr12:47,599,161...47,638,143
Ensembl chr12:41,938,560...41,977,517 		JBrowse link
cell-cell junction disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asb17 ankyrin repeat and SOCS box-containing 17 acts_upstream_of_positive_effect ISO MGI:7314167 (PMID:35070814) RGD PMID:35070814 NCBI chr 2:245,435,718...245,446,785
Ensembl chr 2:242,775,994...242,786,903 		JBrowse link
cell-cell junction maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd177 CD177 molecule involved_in ISO
IBA 		(PMID:23202369)
GO_REF:0000033 		RGD
GO_Central		 PMID:23202369 GO_REF:0000033 NCBI chr 1:89,467,926...89,488,490
Ensembl chr 1:80,340,034...80,360,621 		JBrowse link
G Cd177l1 CD177 molecule like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:89,416,086...89,421,699
Ensembl chr 1:80,288,194...80,293,484 		JBrowse link
G Cd177l2 CD177 molecule like 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:89,451,755...89,456,377
Ensembl chr 1:80,323,863...80,328,311 		JBrowse link
G Cldn3 claudin 3 involved_in ISO
IEA 		(PMID:36008380)
GO_REF:0000107 		RGD
Ensembl		 PMID:36008380 GO_REF:0000107 NCBI chr12:27,345,075...27,346,547
Ensembl chr12:21,708,398...21,711,001 		JBrowse link
G Csf1r colony stimulating factor 1 receptor involved_in ISO
IEA 		(PMID:15117969)
GO_REF:0000107 		RGD
Ensembl		 PMID:15117969 GO_REF:0000107 NCBI chr18:56,834,152...56,860,804
Ensembl chr18:54,546,659...54,590,415 		JBrowse link
G F2r coagulation factor II (thrombin) receptor involved_in ISO
IEA 		(PMID:23202369)
GO_REF:0000107 		RGD
Ensembl		 PMID:23202369 GO_REF:0000107 NCBI chr 2:28,604,066...28,620,579
Ensembl chr 2:26,868,404...26,885,870 		JBrowse link
G F2rl1 F2R like trypsin receptor 1 involved_in ISO
IEA 		(PMID:23202369)
GO_REF:0000107 		RGD
Ensembl		 PMID:23202369 GO_REF:0000107 NCBI chr 2:28,507,003...28,519,954
Ensembl chr 2:26,772,278...26,785,226 		JBrowse link
G Kirrel1 kirre like nephrin family adhesion molecule 1 involved_in ISO (PMID:31472902) RGD PMID:31472902 NCBI chr 2:174,819,564...174,912,998
Ensembl chr 2:172,525,245...172,615,299 		JBrowse link
G Lypd10 Ly6/PLAUR domain containing 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:89,400,914...89,406,146
Ensembl chr 1:80,273,019...80,278,219 		JBrowse link
G Lypd10l1 Ly6/PLAUR domain containing 10 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:89,436,460...89,440,884
Ensembl chr 1:80,308,643...80,312,222 		JBrowse link
G Mpz myelin protein zero acts_upstream_of_or_within ISO MGI:2384133 (PMID:11749037) RGD PMID:11749037 NCBI chr13:86,103,290...86,109,156
Ensembl chr13:83,570,811...83,576,679 		JBrowse link
G Myadm myeloid-associated differentiation marker NOT|involved_in ISO (PMID:23264465) RGD PMID:23264465 NCBI chr 1:74,779,616...74,796,752
Ensembl chr 1:65,864,173...65,874,035 		JBrowse link
G Pard6a par-6 family cell polarity regulator alpha involved_in IEA
ISO 		GO_REF:0000107
(PMID:10954424) 		Ensembl
RGD		 PMID:10954424 GO_REF:0000107 NCBI chr19:50,499,420...50,502,301
Ensembl chr19:33,589,542...33,591,900 		JBrowse link
G Prtn3 proteinase 3 involved_in ISO (PMID:23202369) RGD PMID:23202369 NCBI chr 7:10,472,750...10,482,037
Ensembl chr 7:9,822,122...9,831,944 		JBrowse link
G Shroom2 shroom family member 2 acts_upstream_of_or_within ISO (PMID:17666436) RGD PMID:17666436 NCBI chr  X:25,308,163...25,480,194
Ensembl chr  X:21,812,469...21,984,153 		JBrowse link
desmosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh1 cadherin 1 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:29999492) 		UniProt
Ensembl
RGD		 PMID:29999492 GO_REF:0000024 GO_REF:0000107 NCBI chr19:51,402,178...51,471,572
Ensembl chr19:34,492,371...34,561,775 		JBrowse link
G Dsg3 desmoglein 3 involved_in ISO
IEA 		(PMID:9701552)
GO_REF:0000107 		RGD
Ensembl		 PMID:9701552 GO_REF:0000107 NCBI chr18:12,074,321...12,105,954
Ensembl chr18:11,798,900...11,830,818 		JBrowse link
G Jup junction plakoglobin involved_in
acts_upstream_of_or_within 		ISO
IEA 		(PMID:20859650), (PMID:9049256)
GO_REF:0000107
MGI:1857539 (PMID:18496566), (PMID:8954745), (PMID:9847250) 		RGD
Ensembl		 PMID:8954745 PMID:9049256 PMID:9847250 PMID:18496566 PMID:20859650 GO_REF:0000107 NCBI chr10:85,800,812...85,827,881
Ensembl chr10:85,300,440...85,327,057 		JBrowse link
G Pkp1 plakophilin 1 involved_in ISO
IEA 		(PMID:27375112)
GO_REF:0000107 		RGD
Ensembl		 PMID:27375112 GO_REF:0000107 NCBI chr13:49,861,340...49,909,162
Ensembl chr13:47,309,614...47,357,465 		JBrowse link
G Pkp2 plakophilin 2 involved_in ISO (PMID:18474624) RGD PMID:18474624 NCBI chr11:98,165,974...98,231,916
Ensembl chr11:84,661,783...84,727,730 		JBrowse link
G Pkp3 plakophilin 3 involved_in ISO
IEA 		(PMID:20859650)
GO_REF:0000107
(PMID:27375112) 		RGD
Ensembl		 PMID:20859650 PMID:27375112 GO_REF:0000107 NCBI chr 1:205,617,511...205,628,441
Ensembl chr 1:196,187,835...196,198,844 		JBrowse link
G Prkca protein kinase C, alpha involved_in ISO
IEA 		(PMID:18474624)
GO_REF:0000107 		RGD
Ensembl		 PMID:18474624 GO_REF:0000107 NCBI chr10:93,388,991...93,787,617
Ensembl chr10:92,894,012...93,288,012 		JBrowse link
desmosome disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snai2 snail family transcriptional repressor 2 involved_in ISO (PMID:9182671) RGD PMID:9182671 NCBI chr11:99,686,934...99,690,349
Ensembl chr11:86,181,909...86,186,200 		JBrowse link
desmosome maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dsc1 desmocollin 1 involved_in IEA
ISO 		GO_REF:0000107
(PMID:11714727) 		Ensembl
RGD		 PMID:11714727 GO_REF:0000107 NCBI chr18:11,774,711...11,831,868
Ensembl chr18:11,502,003...11,528,494 		JBrowse link
G Pkp1 plakophilin 1 involved_in ISO
IEA 		(PMID:27033150)
GO_REF:0000107 		RGD
Ensembl		 PMID:27033150 GO_REF:0000107 NCBI chr13:49,861,340...49,909,162
Ensembl chr13:47,309,614...47,357,465 		JBrowse link
desmosome organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dsg2 desmoglein 2 involved_in ISO
IEA 		(PMID:16505173)
GO_REF:0000107 		RGD
Ensembl		 PMID:16505173 GO_REF:0000107 NCBI chr18:12,121,287...12,179,590
Ensembl chr18:11,846,183...11,904,156 		JBrowse link
G Dsp desmoplakin acts_upstream_of_or_within
involved_in 		ISO
IEA 		MGI:2182575 (PMID:9864371)
GO_REF:0000107
(PMID:16917092) 		RGD
Ensembl		 PMID:9864371 PMID:16917092 GO_REF:0000107 NCBI chr17:26,829,153...26,877,419
Ensembl chr17:26,623,588...26,671,800 		JBrowse link
G Grhl1 grainyhead-like transcription factor 1 acts_upstream_of_or_within ISO
IEA 		MGI:3778923 (PMID:24586629)
GO_REF:0000107 		RGD
Ensembl		 PMID:24586629 GO_REF:0000107 NCBI chr 6:46,935,947...46,986,126
Ensembl chr 6:41,207,348...41,254,301 		JBrowse link
G Kprp keratinocyte proline-rich protein acts_upstream_of_or_within ISO
IEA 		(PMID:30905808)
GO_REF:0000107 		RGD
Ensembl		 PMID:30905808 GO_REF:0000107 NCBI chr 2:181,125,530...181,129,828
Ensembl chr 2:178,429,923...178,434,221 		JBrowse link
G Nectin1 nectin cell adhesion molecule 1 acts_upstream_of_or_within ISO
IEA 		MGI:3814719 (PMID:18703497)
GO_REF:0000107 		RGD
Ensembl		 PMID:18703497 GO_REF:0000107 NCBI chr 8:52,998,662...53,061,745
Ensembl chr 8:44,101,776...44,189,787 		JBrowse link
G Perp p53 apoptosis effector related to PMP22 acts_upstream_of_or_within ISO
IEA 		MGI:2683069 (PMID:21285247)
GO_REF:0000107 		RGD
Ensembl		 PMID:21285247 GO_REF:0000107 NCBI chr 1:15,361,784...15,374,230
Ensembl chr 1:13,542,067...13,554,511 		JBrowse link
G Pkp2 plakophilin 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:98,165,974...98,231,916
Ensembl chr11:84,661,783...84,727,730 		JBrowse link
G Pkp3 plakophilin 3 involved_in ISO
IEA 		(PMID:18079750)
GO_REF:0000107 		RGD
Ensembl		 PMID:18079750 GO_REF:0000107 NCBI chr 1:205,617,511...205,628,441
Ensembl chr 1:196,187,835...196,198,844 		JBrowse link
filtration diaphragm assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fkrp fukutin related protein acts_upstream_of_or_within ISO MGI:4834518 (PMID:27711214) RGD PMID:27711214 NCBI chr 1:86,607,769...86,615,045
Ensembl chr 1:77,476,084...77,486,992 		JBrowse link
gap junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnna1 catenin alpha 1 IMP RGD PMID:12577316 RGD:2289808 NCBI chr18:27,002,330...27,135,009
Ensembl chr18:26,728,485...26,860,910 		JBrowse link
G Gja1 gap junction protein, alpha 1 involved_in TAS PMID:15709751 UniProt PMID:15709751 RGD:8554661 NCBI chr20:36,302,490...36,315,010
Ensembl chr20:35,755,991...35,768,582 		JBrowse link
G Gja5 gap junction protein, alpha 5 involved_in ISO
IEA 		(PMID:16790700), (PMID:22247482), (PMID:23348765)
GO_REF:0000107 		RGD
Ensembl		 PMID:16790700 PMID:22247482 PMID:23348765 GO_REF:0000107 NCBI chr 2:187,291,227...187,310,770
Ensembl chr 2:184,564,475...184,621,952 		JBrowse link
G Gjb2 gap junction protein, beta 2 involved_in
acts_upstream_of_or_within 		ISO (PMID:12767933)
(PMID:24590285) 		RGD PMID:12767933 PMID:24590285 NCBI chr15:35,375,977...35,393,817
Ensembl chr15:31,260,357...31,278,177 		JBrowse link
G Gjb6 gap junction protein, beta 6 involved_in ISO (PMID:19285977) RGD PMID:19285977 NCBI chr15:35,400,147...35,410,649
Ensembl chr15:31,284,419...31,294,582 		JBrowse link
G Gjc1 gap junction protein, gamma 1 involved_in ISO (PMID:22982984) RGD PMID:22982984 NCBI chr10:88,262,840...88,285,646
Ensembl chr10:87,760,528...87,785,867 		JBrowse link
G Gjd3 gap junction protein, delta 3 involved_in ISO
IEA 		(PMID:12154091)
GO_REF:0000107 		RGD
Ensembl		 PMID:12154091 GO_REF:0000107 NCBI chr10:84,429,923...84,432,011
Ensembl chr10:83,934,135...83,934,971 		JBrowse link
G Pkp2 plakophilin 2 IMP RGD PMID:17673670 RGD:6784510 NCBI chr11:98,165,974...98,231,916
Ensembl chr11:84,661,783...84,727,730 		JBrowse link
negative regulation of adherens junction organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp6 bone morphogenetic protein 6 involved_in ISO
IEA 		(PMID:26598555)
GO_REF:0000107 		RGD
Ensembl		 PMID:26598555 GO_REF:0000107 NCBI chr17:26,523,704...26,785,558
Ensembl chr17:26,318,569...26,470,365 		JBrowse link
G Rdx radixin involved_in ISO
IEA 		(PMID:22467863)
GO_REF:0000107 		RGD
Ensembl		 PMID:22467863 GO_REF:0000107 NCBI chr 8:61,275,792...61,348,260
Ensembl chr 8:52,379,494...52,437,678 		JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO
IEA 		(PMID:26598555)
GO_REF:0000107 		RGD
Ensembl		 PMID:26598555 GO_REF:0000107 NCBI chr 9:22,452,854...22,468,194
Ensembl chr 9:14,955,300...14,970,641 		JBrowse link
negative regulation of bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta involved_in ISO (PMID:25816133) RGD PMID:25816133 NCBI chr16:76,021,968...76,075,717
Ensembl chr16:69,319,554...69,373,250 		JBrowse link
G Mir105 microRNA 105 acts_upstream_of ISO (PMID:24735924) RGD PMID:24735924 NCBI chr  X:155,480,841...155,480,913
Ensembl chr  X:150,438,529...150,438,601 		JBrowse link
G Mir142 microRNA 142 involved_in ISO (PMID:27277258) RGD PMID:27277258 NCBI chr10:73,055,104...73,055,190
Ensembl chr10:72,557,857...72,557,967 		JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in IEA
ISO 		GO_REF:0000107
UniProtKB:O75116 (PMID:25816133) 		Ensembl
RGD		 PMID:25816133 GO_REF:0000107 NCBI chr18:1,387,360...1,509,218
Ensembl chr18:1,115,905...1,235,571 		JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in IEA
ISO 		GO_REF:0000107
UniProtKB:Q13464 (PMID:25816133) 		Ensembl
RGD		 PMID:25816133 GO_REF:0000107 NCBI chr 6:45,407,823...45,502,773
Ensembl chr 6:39,679,082...39,774,031 		JBrowse link
G Rps6 ribosomal protein S6 IDA RGD PMID:25217631 RGD:11041641 NCBI chr 5:106,417,680...106,420,540
Ensembl chr 5:101,371,136...101,374,602
Ensembl chr 5:101,371,136...101,374,602 		JBrowse link
G Tnf tumor necrosis factor involved_in ISO
IEA 		(PMID:25816133)
GO_REF:0000107 		RGD
Ensembl		 PMID:25816133 GO_REF:0000107 NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,622,011...3,624,629 		JBrowse link
negative regulation of gap junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace angiotensin I converting enzyme involved_in IEA
ISO 		GO_REF:0000107
(PMID:25017399) 		Ensembl
RGD		 PMID:25017399 GO_REF:0000107 NCBI chr10:91,410,129...91,430,246
Ensembl chr10:90,910,316...90,931,131 		JBrowse link
G Il1b interleukin 1 beta involved_in ISO (PMID:11090614) RGD PMID:11090614 NCBI chr 3:137,030,200...137,036,581
Ensembl chr 3:116,577,010...116,583,415 		JBrowse link
G Mir23a microRNA 23a IMP RGD PMID:25798059 RGD:13592600 NCBI chr19:40,859,769...40,859,843
Ensembl chr19:23,954,997...23,955,071 		JBrowse link
paranodal junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 IEP RGD PMID:16687515 RGD:1599119 NCBI chr 2:218,052,555...218,628,414
Ensembl chr 2:215,379,680...215,862,923 		JBrowse link
G Cd9 CD9 molecule involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:14715942) 		UniProt
Ensembl
RGD		 PMID:14715942 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:159,942,553...159,975,463
Ensembl chr 4:158,256,328...158,289,222 		JBrowse link
G Cntnap1 contactin associated protein 1 involved_in ISS
ISO
TAS 		GO_REF:0000024
MGI:3026869 (PMID:16551741), (PMID:16687515), (PMID:19816196)
(PMID:27818385)
PMID:19166515 		BHF-UCL
RGD		 PMID:16551741 PMID:16687515 PMID:19816196 PMID:27818385 PMID:19166515 GO_REF:0000024, RGD:6483326 NCBI chr10:86,610,140...86,625,896
Ensembl chr10:86,111,643...86,125,611 		JBrowse link
G Epb41l3 erythrocyte membrane protein band 4.1-like 3 involved_in ISO (PMID:21966409) RGD PMID:21966409 NCBI chr 9:116,502,864...116,707,274
Ensembl chr 9:109,016,113...109,260,607 		JBrowse link
G Gnpat glyceronephosphate O-acyltransferase acts_upstream_of_or_within ISO MGI:2670461 (PMID:19270340) RGD PMID:19270340 NCBI chr19:69,719,707...69,746,244
Ensembl chr19:52,822,319...52,852,361 		JBrowse link
G Nfasc neurofascin acts_upstream_of_or_within
involved_in 		ISO MGI:3808598|MGI:4837620 (PMID:16337912), (PMID:20371806)
(PMID:19185024) 		RGD PMID:16337912 PMID:19185024 PMID:20371806 NCBI chr13:46,549,369...46,735,989
Ensembl chr13:43,997,224...44,183,880 		JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO MGI:3614822 (PMID:16436605) RGD PMID:16436605 NCBI chr10:48,294,932...48,324,941
Ensembl chr10:47,795,709...47,825,714 		JBrowse link
G Ugt8 UDP glycosyltransferase 8 involved_in ISO
IEA 		(PMID:16551741)
GO_REF:0000107 		RGD
Ensembl		 PMID:16551741 GO_REF:0000107 NCBI chr 2:216,938,884...217,007,167
Ensembl chr 2:214,264,483...214,332,660 		JBrowse link
paranodal junction maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cntnap1 contactin associated protein 1 involved_in ISO MGI:3026869 (PMID:16687515) RGD PMID:16687515 NCBI chr10:86,610,140...86,625,896
Ensembl chr10:86,111,643...86,125,611 		JBrowse link
G Epb41l3 erythrocyte membrane protein band 4.1-like 3 involved_in ISO MGI:5140703 (PMID:21632923) RGD PMID:21632923 NCBI chr 9:116,502,864...116,707,274
Ensembl chr 9:109,016,113...109,260,607 		JBrowse link
G Whrn whirlin involved_in IEA
ISO 		GO_REF:0000107
(PMID:24011083) 		Ensembl
RGD		 PMID:24011083 GO_REF:0000107 NCBI chr 5:81,843,820...81,933,400
Ensembl chr 5:76,828,301...76,912,223 		JBrowse link
positive regulation of adherens junction organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Add1 adducin 1 involved_in ISO
IEA
IBA 		(PMID:25978380)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:25978380 GO_REF:0000033 GO_REF:0000107 NCBI chr14:80,333,242...80,401,641
Ensembl chr14:76,108,654...76,167,182 		JBrowse link
G Ptpn23 protein tyrosine phosphatase, non-receptor type 23 involved_in IEA
ISO 		GO_REF:0000107
(PMID:21724833) 		Ensembl
RGD		 PMID:21724833 GO_REF:0000107 NCBI chr 8:119,239,213...119,261,675
Ensembl chr 8:110,360,804...110,383,271 		JBrowse link
positive regulation of bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvrl1 activin A receptor like type 1 involved_in ISO UniProtKB:Q9UK05 (PMID:32561494) RGD PMID:32561494 NCBI chr 7:134,117,917...134,135,306
Ensembl chr 7:132,239,729...132,256,591 		JBrowse link
G Cldn1 claudin 1 IMP RGD PMID:22684624 RGD:11341733 NCBI chr11:87,926,376...87,941,533
Ensembl chr11:74,421,569...74,436,724 		JBrowse link
G Cldn5 claudin 5 involved_in ISO
IEA 		(PMID:25323998)
GO_REF:0000107 		RGD
Ensembl		 PMID:25323998 GO_REF:0000107 NCBI chr11:95,717,172...95,718,598
Ensembl chr11:82,211,475...82,214,992 		JBrowse link
G Dsg3 desmoglein 3 involved_in ISO (PMID:22796473) RGD PMID:22796473 NCBI chr18:12,074,321...12,105,954
Ensembl chr18:11,798,900...11,830,818 		JBrowse link
G Epha2 Eph receptor A2 involved_in ISO
IEA 		(PMID:27815408)
GO_REF:0000107 		RGD
Ensembl		 PMID:27815408 GO_REF:0000107 NCBI chr 5:158,888,629...158,917,100
Ensembl chr 5:153,605,644...153,634,117 		JBrowse link
G Gcg glucagon involved_in ISO (PMID:25050009) RGD PMID:25050009 NCBI chr 3:67,522,489...67,531,533
Ensembl chr 3:47,113,914...47,122,929 		JBrowse link
G Gdf2 growth differentiation factor 2 involved_in ISO
IEA 		(PMID:32561494)
GO_REF:0000107 		RGD
Ensembl		 PMID:32561494 GO_REF:0000107 NCBI chr16:9,261,679...9,267,678
Ensembl chr16:9,255,430...9,261,429 		JBrowse link
G Il17a interleukin 17A involved_in IEA
ISO 		GO_REF:0000107
(PMID:26431948) 		Ensembl
RGD		 PMID:26431948 GO_REF:0000107 NCBI chr 9:30,640,844...30,644,331
Ensembl chr 9:23,144,402...23,147,889 		JBrowse link
G Nphp1 nephrocystin 1 involved_in ISO (PMID:19755384) RGD PMID:19755384 NCBI chr 3:135,413,927...135,469,505
Ensembl chr 3:114,960,650...115,016,234 		JBrowse link
G Nphp4 nephrocystin 4 involved_in ISO
IEA 		(PMID:19755384)
GO_REF:0000107 		RGD
Ensembl		 PMID:19755384 GO_REF:0000107 NCBI chr 5:168,270,522...168,356,393
Ensembl chr 5:162,988,370...163,073,706 		JBrowse link
G Rac1 Rac family small GTPase 1 involved_in ISO
ISS 		(PMID:22796473)
GO_REF:0000024 		RGD
UniProt		 PMID:22796473 GO_REF:0000024 NCBI chr12:16,150,411...16,170,864
Ensembl chr12:11,036,698...11,057,251 		JBrowse link
positive regulation of gap junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace2 angiotensin converting enzyme 2 involved_in ISO
IEA 		(PMID:12967627)
GO_REF:0000107 		RGD
Ensembl		 PMID:12967627 GO_REF:0000107 NCBI chr  X:33,925,458...33,972,851
Ensembl chr  X:30,293,589...30,340,977 		JBrowse link
G Agt angiotensinogen involved_in ISO
IEA 		UniProtKB:P00797 (PMID:17416596)
GO_REF:0000107 		RGD
Ensembl		 PMID:17416596 GO_REF:0000107 NCBI chr19:69,426,540...69,447,017
Ensembl chr19:52,529,185...52,540,977 		JBrowse link
G Cav1 caveolin 1 involved_in IEA
ISO 		GO_REF:0000107
(PMID:25017399) 		Ensembl
RGD		 PMID:25017399 GO_REF:0000107 NCBI chr 4:46,606,538...46,639,616
Ensembl chr 4:45,634,918...45,673,705 		JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO
IEA 		(PMID:33238150)
GO_REF:0000107 		RGD
Ensembl		 PMID:33238150 GO_REF:0000107 NCBI chr 4:75,109,358...77,366,258
Ensembl chr 4:74,109,472...76,362,027 		JBrowse link
G Hopx HOP homeobox involved_in ISO
IEA 		(PMID:15790958)
GO_REF:0000107 		RGD
Ensembl		 PMID:15790958 GO_REF:0000107 NCBI chr14:31,410,235...31,437,189
Ensembl chr14:31,075,148...31,082,909 		JBrowse link
G Irx3 iroquois homeobox 3 involved_in ISO
IEA 		(PMID:21825130), (PMID:26786475)
GO_REF:0000107 		RGD
Ensembl		 PMID:21825130 PMID:26786475 GO_REF:0000107 NCBI chr19:31,384,803...31,388,241
Ensembl chr19:15,211,878...15,215,317 		JBrowse link
G Tbx5 T-box transcription factor 5 involved_in IEA
ISO 		GO_REF:0000107
(PMID:22728936) 		Ensembl
RGD		 PMID:22728936 GO_REF:0000107 NCBI chr12:42,342,926...42,399,723
Ensembl chr12:36,688,014...36,734,885 		JBrowse link
positive regulation of tight junction disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc8 ATP binding cassette subfamily C member 8 IMP RGD PMID:23633925 RGD:12791991 NCBI chr 1:105,734,992...105,816,272
Ensembl chr 1:96,598,647...96,679,510 		JBrowse link
G Il1b interleukin 1 beta acts_upstream_of ISO (PMID:18390750) RGD PMID:18390750 NCBI chr 3:137,030,200...137,036,581
Ensembl chr 3:116,577,010...116,583,415 		JBrowse link
G Mylk3 myosin light chain kinase 3 acts_upstream_of_or_within ISO
IEA 		(PMID:18390750)
GO_REF:0000107 		RGD
Ensembl		 PMID:18390750 GO_REF:0000107 NCBI chr19:37,858,298...37,916,805
Ensembl chr19:21,691,929...21,742,954 		JBrowse link
G Tgfb3 transforming growth factor, beta 3 involved_in ISO (PMID:18718461) RGD PMID:18718461 NCBI chr 6:111,435,170...111,457,646
Ensembl chr 6:105,704,236...105,726,564 		JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 involved_in IEA
ISO 		GO_REF:0000107
UniProtKB:P10600 (PMID:18718461) 		Ensembl
RGD		 PMID:18718461 GO_REF:0000107 NCBI chr 5:66,449,348...66,506,371
Ensembl chr 5:61,653,233...61,710,777 		JBrowse link
regulation of bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G F11r F11 receptor involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr13:86,406,229...86,429,819
Ensembl chr13:83,873,797...83,897,402 		JBrowse link
G Fzd5 frizzled class receptor 5 acts_upstream_of_or_within ISO MGI:3583769 (PMID:23610556) RGD PMID:23610556 NCBI chr 9:73,606,860...73,614,039
Ensembl chr 9:66,113,112...66,121,457 		JBrowse link
G Gja1 gap junction protein, alpha 1 IMP RGD PMID:19509333 RGD:6784505 NCBI chr20:36,302,490...36,315,010
Ensembl chr20:35,755,991...35,768,582 		JBrowse link
G Gpbar1 G protein-coupled bile acid receptor 1 involved_in ISO
IEA 		(PMID:22046243)
GO_REF:0000107 		RGD
Ensembl		 PMID:22046243 GO_REF:0000107 NCBI chr 9:83,309,895...83,312,397
Ensembl chr 9:75,860,677...75,863,168 		JBrowse link
G Myo1c myosin 1C involved_in ISO
IEA 		(PMID:21402783)
GO_REF:0000107 		RGD
Ensembl		 PMID:21402783 GO_REF:0000107 NCBI chr10:60,996,642...61,019,022
Ensembl chr10:60,498,280...60,520,752 		JBrowse link
G Nedd4l NEDD4 like E3 ubiquitin protein ligase acts_upstream_of_or_within ISO (PMID:20504882) RGD PMID:20504882 NCBI chr18:60,663,918...60,996,824
Ensembl chr18:58,393,509...58,723,137 		JBrowse link
G Pkp2 plakophilin 2 IMP RGD PMID:19509333 RGD:6784505 NCBI chr11:98,165,974...98,231,916
Ensembl chr11:84,661,783...84,727,730 		JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha involved_in ISO
IEA 		(PMID:15905176)
GO_REF:0000107 		RGD
Ensembl		 PMID:15905176 GO_REF:0000107 NCBI chr19:41,059,843...41,083,189
Ensembl chr19:24,155,090...24,178,430 		JBrowse link
G Prkch protein kinase C, eta involved_in ISO
ISS
IEA 		(PMID:19114660)
GO_REF:0000024
GO_REF:0000107 		RGD
UniProt
Ensembl		 PMID:19114660 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:98,027,830...98,226,486
Ensembl chr 6:92,292,000...92,490,654 		JBrowse link
G Snai1 snail family transcriptional repressor 1 involved_in ISO
IEA 		(PMID:15314165)
GO_REF:0000107 		RGD
Ensembl		 PMID:15314165 GO_REF:0000107 NCBI chr 3:176,667,476...176,671,965
Ensembl chr 3:156,248,485...156,252,969 		JBrowse link
G Snai2 snail family transcriptional repressor 2 involved_in ISO (PMID:15314165) RGD PMID:15314165 NCBI chr11:99,686,934...99,690,349
Ensembl chr11:86,181,909...86,186,200 		JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr 1:128,260,330...128,505,018
Ensembl chr 1:118,849,838...119,094,432 		JBrowse link
regulation of gap junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aplnr apelin receptor acts_upstream_of_or_within ISO
IEA 		(PMID:23603510)
GO_REF:0000107 		RGD
Ensembl		 PMID:23603510 GO_REF:0000107 NCBI chr 3:90,624,055...90,627,700
Ensembl chr 3:70,217,385...70,221,050 		JBrowse link
slit diaphragm assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nphs1 NPHS1 adhesion molecule, nephrin involved_in ISS
ISO 		GO_REF:0000024
(PMID:11136707) 		UniProt
RGD		 PMID:11136707 GO_REF:0000024 NCBI chr 1:94,848,261...94,876,522
Ensembl chr 1:85,720,812...85,749,078 		JBrowse link
G Ptpro protein tyrosine phosphatase, receptor type, O involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:11086029) 		UniProt
Ensembl
RGD		 PMID:11086029 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:171,895,104...172,105,911
Ensembl chr 4:170,164,431...170,374,771 		JBrowse link
tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actg1 actin, gamma 1 involved_in ISO (PMID:22855531) RGD PMID:22855531 NCBI chr10:106,118,106...106,120,951
Ensembl chr10:105,619,737...105,624,232
Ensembl chr 3:105,619,737...105,624,232 		JBrowse link
G Cldn11 claudin 11 involved_in ISO
IEA 		(PMID:30734065)
GO_REF:0000107 		RGD
Ensembl		 PMID:30734065 GO_REF:0000107 NCBI chr 2:114,136,234...114,149,539
Ensembl chr 2:112,207,745...112,221,050 		JBrowse link
G Cldn12 claudin 12 NOT|involved_in ISO (PMID:31511021) RGD PMID:31511021 NCBI chr 4:29,477,468...29,488,465
Ensembl chr 4:28,522,678...28,533,801 		JBrowse link
G Cldn18 claudin 18 involved_in ISO (PMID:22079592) RGD PMID:22079592 NCBI chr 8:109,125,819...109,145,110
Ensembl chr 8:100,247,633...100,273,351 		JBrowse link
G Cldn5 claudin 5 involved_in ISO
IEA 		(PMID:30734065)
GO_REF:0000107 		RGD
Ensembl		 PMID:30734065 GO_REF:0000107 NCBI chr11:95,717,172...95,718,598
Ensembl chr11:82,211,475...82,214,992 		JBrowse link
G Dsg3 desmoglein 3 involved_in ISO
IEA 		(PMID:31835537)
GO_REF:0000107 		RGD
Ensembl		 PMID:31835537 GO_REF:0000107 NCBI chr18:12,074,321...12,105,954
Ensembl chr18:11,798,900...11,830,818 		JBrowse link
G Ephb2 Eph receptor B2 IDA RGD PMID:33722292 RGD:127285641 NCBI chr 5:154,179,065...154,360,459
Ensembl chr 5:148,897,246...149,077,059 		JBrowse link
G Mpdz multiple PDZ domain crumbs cell polarity complex component involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:100,812,121...100,966,566
Ensembl chr 5:95,766,118...95,920,499 		JBrowse link
G Patj PATJ, crumbs cell polarity complex component involved_in ISO
IBA
ISS 		(PMID:15738264)
GO_REF:0000033
GO_REF:0000024 		RGD
GO_Central
UniProt		 PMID:15738264 GO_REF:0000024 GO_REF:0000033 NCBI chr 5:118,177,557...118,480,301
Ensembl chr 5:113,062,118...113,364,807 		JBrowse link
tight junction organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cldn18 claudin 18 involved_in ISO
IEA 		(PMID:24588076)
GO_REF:0000107 		RGD
Ensembl		 PMID:24588076 GO_REF:0000107 NCBI chr 8:109,125,819...109,145,110
Ensembl chr 8:100,247,633...100,273,351 		JBrowse link
G Cldn19 claudin 19 acts_upstream_of_or_within ISO
IEA 		MGI:3583804 (PMID:15883201)
GO_REF:0000107 		RGD
Ensembl		 PMID:15883201 GO_REF:0000107 NCBI chr 5:138,148,234...138,155,672
Ensembl chr 5:132,863,267...132,868,227 		JBrowse link
G Cldn9 claudin 9 acts_upstream_of_or_within ISO (PMID:17130295) RGD PMID:17130295 NCBI chr10:13,218,728...13,220,159 JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO
IEA 		(PMID:26024086)
GO_REF:0000107 		RGD
Ensembl		 PMID:26024086 GO_REF:0000107 NCBI chr 7:86,265,651...86,544,488
Ensembl chr 7:84,375,784...84,655,357 		JBrowse link
G Ocln occludin involved_in ISO (PMID:30734065) RGD PMID:30734065 NCBI chr 2:33,391,303...33,442,207
Ensembl chr 2:31,657,220...31,764,150 		JBrowse link
G Plec plectin involved_in ISO
IEA 		MGI:3721885 (PMID:26519478)
GO_REF:0000107 		RGD
Ensembl		 PMID:26519478 GO_REF:0000107 NCBI chr 7:109,768,447...109,829,798
Ensembl chr 7:107,887,764...107,945,467 		JBrowse link
G Svep1 sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 acts_upstream_of_or_within ISO
IEA 		MGI:5286317 (PMID:28179432)
GO_REF:0000107 		RGD
Ensembl		 PMID:28179432 GO_REF:0000107 NCBI chr 5:77,606,523...77,783,292
Ensembl chr 5:72,811,410...72,988,525 		JBrowse link
tricellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ildr1 immunoglobulin-like domain containing receptor 1 involved_in ISO
IEA 		(PMID:25217574)
GO_REF:0000107 		RGD
Ensembl		 PMID:25217574 GO_REF:0000107 NCBI chr11:77,591,146...77,624,268
Ensembl chr11:64,008,566...64,118,760 		JBrowse link
G Lsr lipolysis stimulated lipoprotein receptor involved_in IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
(PMID:21245199), (PMID:22671589) 		GO_Central
Ensembl
RGD		 PMID:21245199 PMID:22671589 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:95,313,830...95,329,471
Ensembl chr 1:86,186,431...86,201,952 		JBrowse link
zonula adherens assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi2 abl-interactor 2 involved_in ISO (PMID:15572692) RGD PMID:15572692 NCBI chr 9:69,321,072...69,490,630
Ensembl chr 9:61,827,139...61,905,699 		JBrowse link
G Dlg5 discs large MAGUK scaffold protein 5 acts_upstream_of_or_within ISO
IEA 		MGI:3757646 (PMID:17765678)
GO_REF:0000107 		RGD
Ensembl		 PMID:17765678 GO_REF:0000107 NCBI chr15:125,287...237,334
Ensembl chr15:75,786...187,837 		JBrowse link
zonula adherens maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camsap3 calmodulin regulated spectrin-associated protein family, member 3 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:19041755) 		UniProt
Ensembl
RGD		 PMID:19041755 GO_REF:0000024 GO_REF:0000107 NCBI chr12:6,440,959...6,464,582
Ensembl chr12:1,643,251...1,666,685 		JBrowse link
G Kifc3 kinesin family member C3 involved_in ISO
IEA 		(PMID:19041755)
GO_REF:0000107 		RGD
Ensembl		 PMID:19041755 GO_REF:0000107 NCBI chr19:9,831,159...9,926,405
Ensembl chr19:9,886,693...9,920,451 		JBrowse link
G Plekha7 pleckstrin homology domain containing A7 involved_in ISO
IBA 		(PMID:19041755)
GO_REF:0000033 		RGD
GO_Central		 PMID:19041755 GO_REF:0000033 NCBI chr 1:179,798,856...179,982,155
Ensembl chr 1:170,365,135...170,547,775 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20543
    cellular process 19534
      cellular component organization or biogenesis 7114
        cellular component organization 6827
          cell junction organization 989
            cell-cell junction organization 244
              adherens junction organization + 59
              cell-cell junction assembly + 172
              cell-cell junction disassembly + 8
              cell-cell junction maintenance + 29
              desmosome organization + 15
              plasmodesma organization 0
              tight junction organization + 110
paths to the root