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ONTOLOGY REPORT - ANNOTATIONS


Term:cell-cell junction organization
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Accession:GO:0045216 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a cell-cell junction. A cell-cell junction is a specialized region of connection between two cells.
Synonyms:exact_synonym: cell-cell junction assembly and maintenance;   cell-cell junction organisation;   intercellular junction assembly and maintenance
 related_synonym: cell-cell junction biogenesis


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cell-cell junction organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ajm1 apical junction component 1 homolog involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:8,394,942...8,401,559 JBrowse link
G Ccm2 CCM2 scaffold protein acts_upstream_of_or_within ISO MGI:3512761 (MGI:3837878|PMID:19151727) RGD PMID:19151727 MGI:3837878 NCBI chr14:81,418,418...81,464,114 JBrowse link
G Ceacam1 CEA cell adhesion molecule 1 involved_in ISO (MGI:5525176|PMID:23800882) RGD PMID:23800882 MGI:5525176 NCBI chr 1:81,043,595...81,060,050 JBrowse link
G Cldn1 claudin 1 acts_upstream_of_or_within ISO (PMID:20164257) RGD PMID:20164257 NCBI chr11:74,421,569...74,436,728 JBrowse link
G Cldn6 claudin 6 acts_upstream_of_or_within ISO (MGI:3696284|PMID:17130295) RGD PMID:17130295 MGI:3696284 NCBI chr10:12,710,302...12,713,987 JBrowse link
G Cldn9 claudin 9 acts_upstream_of_or_within ISO (MGI:3696284|PMID:17130295) RGD PMID:17130295 MGI:3696284 NCBI chr10:12,714,137...12,715,568 JBrowse link
G Cxadr CXADR, Ig-like cell adhesion molecule involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:3711226 (MGI:3709954|PMID:16543498)
UniProt
RGD
PMID:16543498 GO_REF:0000024 MGI:3709954 NCBI chr11:16,982,752...17,030,078 JBrowse link
G Flna filamin A involved_in ISO (MGI:3699024|PMID:17172441) RGD PMID:17172441 MGI:3699024 NCBI chr  X:152,007,758...152,034,266 JBrowse link
G Gja1 gap junction protein, alpha 1 acts_upstream_of_or_within ISO MGI:1857177 (MGI:1267300|PMID:9620080) RGD PMID:9620080 MGI:1267300 NCBI chr20:35,756,007...35,768,481 JBrowse link
G Heg1 heart development protein with EGF-like domains 1 acts_upstream_of_or_within ISO MGI:3838392 (MGI:3837878|PMID:19151727) RGD PMID:19151727 MGI:3837878 NCBI chr11:67,006,954...67,095,020 JBrowse link
G Hnf4a hepatocyte nuclear factor 4, alpha IDA RGD PMID:12749857 RGD:1625017 NCBI chr 3:152,186,787...152,248,320 JBrowse link
G Lims1 LIM zinc finger domain containing 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2385067 (MGI:4867167|PMID:19652092)
RGD PMID:19652092, PMID:21873635 MGI:4867167, RGD:13792537 NCBI chr20:26,309,833...26,418,511 JBrowse link
G Lims2 LIM zinc finger domain containing 2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1195263 (MGI:4867167|PMID:19652092)
RGD PMID:19652092, PMID:21873635 MGI:4867167, RGD:13792537 NCBI chr18:23,553,813...23,592,137 JBrowse link
G Marveld2 MARVEL domain containing 2 acts_upstream_of_or_within ISO MGI:5550095 (MGI:3612201|PMID:16365161), (MGI:5514431|PMID:23979167)
(PMID:20164257)
RGD PMID:16365161 PMID:20164257 PMID:23979167 MGI:3612201 MGI:5514431 NCBI chr 2:31,742,652...31,764,150 JBrowse link
G Marveld3 MARVEL domain containing 3 acts_upstream_of_or_within ISO (MGI:4836140|PMID:20164257)
(PMID:20164257)
RGD PMID:20164257 MGI:4836140 NCBI chr19:37,908,727...37,923,420 JBrowse link
G Nf2 neurofibromin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857941 (MGI:2656687|PMID:12695331)
Ensembl
RGD
PMID:12695331 GO_REF:0000107 MGI:2656687 NCBI chr14:79,627,399...79,710,709 JBrowse link
G Ocln occludin acts_upstream_of_or_within ISO (PMID:20164257) RGD PMID:20164257 NCBI chr 2:31,657,217...31,707,466 JBrowse link
G Pkhd1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin acts_upstream_of_or_within ISO (MGI:4880601|PMID:20875407) RGD PMID:20875407 MGI:4880601 NCBI chr 9:22,547,396...23,037,443 JBrowse link
G Prkci protein kinase C, iota involved_in ISO (PMID:11257119) RGD PMID:11257119 NCBI chr 2:112,321,919...112,382,305 JBrowse link
G Rac1 Rac family small GTPase 1 acts_upstream_of_or_within ISO MGI:2663662|MGI:2663669 (MGI:4430014|PMID:20016102) RGD PMID:20016102 MGI:4430014 NCBI chr12:11,037,028...11,057,251 JBrowse link
G Smad3 SMAD family member 3 involved_in ISO (PMID:18505915) RGD PMID:18505915 NCBI chr 8:64,126,829...64,236,960 JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:18505915)
UniProt
RGD
PMID:18505915 GO_REF:0000024 NCBI chr 1:81,196,532...81,212,848 JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:18505915)
UniProt
RGD
PMID:18505915 GO_REF:0000024 NCBI chr13:98,160,075...98,261,771 JBrowse link
G Tgfb3 transforming growth factor, beta 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:18505915)
AgBase
RGD
PMID:18505915 GO_REF:0000024 NCBI chr 6:105,704,058...105,726,661 JBrowse link
G Tjp1 tight junction protein 1 involved_in IBA
ISO
PMID:21873635
(PMID:25753039)
RGD PMID:25753039, PMID:21873635 RGD:13792537 NCBI chr 1:118,849,838...119,094,492 JBrowse link
G Tjp2 tight junction protein 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:221,709,745...221,838,383 JBrowse link
G Tjp3 tight junction protein 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:8,427,650...8,446,279 JBrowse link
G Xirp2 xin actin-binding repeat containing 2 acts_upstream_of_or_within ISO MGI:4453315 (MGI:4438861|PMID:20360251) RGD PMID:20360251 MGI:4438861 NCBI chr 3:52,126,213...52,213,094 JBrowse link
adherens junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin, beta involved_in ISO
IEA
(PMID:22855531)
GO_REF:0000107
RGD
Ensembl
PMID:22855531 GO_REF:0000107 NCBI chr12:11,663,112...11,666,697 JBrowse link
G Ctnnb1 catenin beta 1 involved_in ISO
IEA
ISS
(PMID:20086044), (PMID:20123964)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:20086044 PMID:20123964 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:120,640,008...120,667,110 JBrowse link
G Hipk1 homeodomain interacting protein kinase 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:5494340|PMID:23565059)
Ensembl
RGD
PMID:23565059 GO_REF:0000107 MGI:5494340 NCBI chr 2:191,248,817...191,299,787 JBrowse link
G Jam3 junctional adhesion molecule 3 involved_in ISO (PMID:19060272) RGD PMID:19060272 NCBI chr 8:25,508,461...25,569,306 JBrowse link
G Pak2 p21 (RAC1) activated kinase 2 involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr11:68,708,070...68,766,622 JBrowse link
G Ramp2 receptor activity modifying protein 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:3772552|PMID:18097473)
(PMID:18097473)
UniProt
RGD
PMID:18097473 GO_REF:0000024 MGI:3772552 NCBI chr10:86,187,366...86,190,692 JBrowse link
G Smad7 SMAD family member 7 involved_in ISO
IEA
(PMID:18593713)
GO_REF:0000107
RGD
Ensembl
PMID:18593713 GO_REF:0000107 NCBI chr18:68,988,429...69,016,774 JBrowse link
G Tbcd tubulin folding cofactor D involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:106,717,340...106,874,126 JBrowse link
G Vcl vinculin involved_in IEA
ISO
GO_REF:0000107
(PMID:20086044)
Ensembl
RGD
PMID:20086044 GO_REF:0000107 NCBI chr15:3,265,776...3,355,586 JBrowse link
G Zfp703 zinc finger protein 703 involved_in ISO (MGI:4940410|PMID:21317240) RGD PMID:21317240 MGI:4940410 NCBI chr16:65,076,507...65,080,677 JBrowse link
adherens junction maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afdn afadin, adherens junction formation factor acts_upstream_of_or_within ISO (MGI:5605648|PMID:25100583) RGD PMID:25100583 MGI:5605648 NCBI chr 1:53,884,711...54,034,216 JBrowse link
G Fermt2 FERM domain containing kindlin 2 involved_in ISO (PMID:28799653)
(MGI:6467695|PMID:28799653)
RGD PMID:28799653 MGI:6467695 NCBI chr15:18,682,927...18,751,959 JBrowse link
G Inava innate immunity activator involved_in ISO
IBA
(PMID:29420262)
(MGI:6119883|PMID:29420262)
PMID:21873635
RGD PMID:29420262, PMID:21873635 MGI:6119883, RGD:13792537 NCBI chr13:47,666,446...47,687,383 JBrowse link
G Mtss1 MTSS I-BAR domain containing 1 acts_upstream_of_or_within ISO MGI:5319219 (MGI:5317250|PMID:21406566) RGD PMID:21406566 MGI:5317250 NCBI chr 7:90,488,751...90,628,007 JBrowse link
G Pkp2 plakophilin 2 IMP RGD PMID:18261826 RGD:6784508 NCBI chr11:84,661,783...84,727,730 JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr 1:118,849,838...119,094,492 JBrowse link
adherens junction organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam10 ADAM metallopeptidase domain 10 involved_in ISO (MGI:6316556|PMID:30639848) RGD PMID:30639848 MGI:6316556 NCBI chr 8:71,346,008...71,477,889 JBrowse link
G Cdc42 cell division cycle 42 acts_upstream_of_or_within ISO MGI:3619134 (MGI:3664674|PMID:16892058) RGD PMID:16892058 MGI:3664674 NCBI chr 5:149,555,069...149,593,239 JBrowse link
G Cdh1 cadherin 1 involved_in ISO (PMID:21724833) RGD PMID:21724833 NCBI chr19:34,492,371...34,561,775 JBrowse link
G Cdh10 cadherin 10 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:68,628,623...68,850,995 JBrowse link
G Cdh11 cadherin 11 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:2,148,447...2,305,754 JBrowse link
G Cdh12 cadherin 12 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:70,474,679...71,705,369 JBrowse link
G Cdh18 cadherin 18 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:72,818,076...73,820,144 JBrowse link
G Cdh19 cadherin 19 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:27,935,915...28,047,490 JBrowse link
G Cdh20 cadherin 20 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:20,737,640...21,069,746 JBrowse link
G Cdh22 cadherin 22 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:153,845,563...153,970,630 JBrowse link
G Cdh24 cadherin 24 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:28,091,578...28,101,330 JBrowse link
G Cdh5 cadherin 5 involved_in ISO
IBA
(PMID:26598555)
PMID:21873635
RGD PMID:26598555, PMID:21873635 RGD:13792537 NCBI chr19:815,415...854,478 JBrowse link
G Cdh6 cadherin 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:62,079,139...62,225,228 JBrowse link
G Cdh7 cadherin 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:26,672,058...26,821,571 JBrowse link
G Cdh8 cadherin 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:5,494,038...5,901,810 JBrowse link
G Cdh9 cadherin 9 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:66,280,422...66,367,121 JBrowse link
G Csk C-terminal Src kinase involved_in IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:15389520, PMID:21873635 RGD:5134367, RGD:13792537 NCBI chr 8:58,029,748...58,048,742 JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within ISO (MGI:3829282|PMID:19129494) RGD PMID:19129494 MGI:3829282 NCBI chr 8:120,640,008...120,667,110 JBrowse link
G Dchs1 dachsous cadherin-related 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:160,104,931...160,138,958 JBrowse link
G Dsp desmoplakin acts_upstream_of_or_within ISO MGI:1926500|MGI:2156542 (MGI:2154556|PMID:11781569) RGD PMID:11781569 MGI:2154556 NCBI chr17:26,623,602...26,671,692 JBrowse link
G Efnb2 ephrin B2 involved_in ISO (MGI:6316556|PMID:30639848) RGD PMID:30639848 MGI:6316556 NCBI chr16:80,783,389...80,827,420 JBrowse link
G Epha4 Eph receptor A4 involved_in ISO (MGI:6316556|PMID:30639848) RGD PMID:30639848 MGI:6316556 NCBI chr 9:78,815,460...78,958,139 JBrowse link
G Numb NUMB, endocytic adaptor protein involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:894702 (MGI:3721043|PMID:17589506)
Ensembl
RGD
PMID:17589506 GO_REF:0000107 MGI:3721043 NCBI chr 6:103,431,400...103,553,422 JBrowse link
G Numbl NUMB-like, endocytic adaptor protein involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:107423 (MGI:3721043|PMID:17589506)
Ensembl
RGD
PMID:17589506 GO_REF:0000107 MGI:3721043 NCBI chr 1:82,549,814...82,573,788 JBrowse link
G Plec plectin involved_in ISO
IEA
MGI:3721885 (MGI:5790023|PMID:26519478)
GO_REF:0000107
RGD
Ensembl
PMID:26519478 GO_REF:0000107 MGI:5790023 NCBI chr 7:107,887,764...107,949,100 JBrowse link
G Specc1l sperm antigen with calponin homology and coiled-coil domains 1-like acts_upstream_of_or_within ISO MGI:4124253 (MGI:6101898|PMID:26787558) RGD PMID:26787558 MGI:6101898 NCBI chr20:13,337,983...13,443,665 JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase IEP RGD PMID:15389520 RGD:5134367 NCBI chr 3:146,091,969...146,139,492 JBrowse link
apical junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cldn19 claudin 19 acts_upstream_of_or_within ISO MGI:3583804 (MGI:3583407|PMID:15883201) RGD PMID:15883201 MGI:3583407 NCBI chr 5:132,862,939...132,870,364 JBrowse link
G Ctnna1 catenin alpha 1 acts_upstream_of_or_within ISO MGI:2176173|MGI:2677796 (MGI:3619284|PMID:16543460), (MGI:5315030|PMID:22411810) RGD PMID:16543460 PMID:22411810 MGI:3619284 MGI:5315030 NCBI chr18:26,728,246...26,860,911 JBrowse link
G Fbf1 Fas binding factor 1 involved_in ISO (PMID:18838552) RGD PMID:18838552 NCBI chr10:101,375,769...101,401,624 JBrowse link
G Pkn2 protein kinase N2 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:4941685|PMID:20974804)
GO_REF:0000107
(PMID:20974804)
UniProt
RGD
Ensembl
PMID:20974804 GO_REF:0000024 GO_REF:0000107 MGI:4941685 NCBI chr 2:231,793,584...231,898,953 JBrowse link
G Rhoa ras homolog family member A involved_in ISS
ISO
GO_REF:0000024
(MGI:4941685|PMID:20974804)
(PMID:20974804)
UniProt
RGD
PMID:20974804 GO_REF:0000024 MGI:4941685 NCBI chr 8:108,991,926...109,025,746 JBrowse link
G Rhoc ras homolog family member C involved_in ISO (PMID:20974804)
(MGI:4941685|PMID:20974804)
RGD PMID:20974804 MGI:4941685 NCBI chr 2:192,287,065...192,293,292 JBrowse link
G Vcl vinculin involved_in ISO
IEA
(PMID:9700171)
GO_REF:0000107
RGD
Ensembl
PMID:9700171 GO_REF:0000107 NCBI chr15:3,265,776...3,355,586 JBrowse link
G Wdr1 WD repeat domain 1 involved_in ISO (PMID:25792565) RGD PMID:25792565 NCBI chr14:72,258,032...72,291,768 JBrowse link
bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07024637.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07037477.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07037590.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Actn4 actinin alpha 4 involved_in ISO (MGI:3794927|PMID:18332111) RGD PMID:18332111 MGI:3794927 NCBI chr 1:84,182,783...84,251,867 JBrowse link
G Afdn afadin, adherens junction formation factor involved_in ISO (PMID:27815408) RGD PMID:27815408 NCBI chr 1:53,884,711...54,034,216 JBrowse link
G Alox12b arachidonate 12-lipoxygenase, 12R type NOT|involved_in ISO (MGI:3789553|PMID:17403930) RGD PMID:17403930 MGI:3789553 NCBI chr10:53,863,060...53,874,938 JBrowse link
G Aloxe3 arachidonate lipoxygenase 3 NOT|involved_in ISO (MGI:5488571|PMID:22832496) RGD PMID:22832496 MGI:5488571 NCBI chr10:53,830,219...53,854,328 JBrowse link
G Arl2 ADP-ribosylation factor like GTPase 2 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:203,434,129...203,446,156 JBrowse link
G Cdh1 cadherin 1 acts_upstream_of_or_within ISO MGI:2389020 (MGI:3574751|PMID:15775979) RGD PMID:15775979 MGI:3574751 NCBI chr19:34,492,371...34,561,775 JBrowse link
G Cdh5 cadherin 5 involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr19:815,415...854,478 JBrowse link
G Cgn cingulin acts_upstream_of_or_within ISO (MGI:5562592|PMID:24385485) RGD PMID:24385485 MGI:5562592 NCBI chr 2:182,308,389...182,335,747 JBrowse link
G Cldn1 claudin 1 involved_in ISO
IBA
(PMID:25849148), (PMID:26607202)
PMID:21873635
RGD PMID:25849148 PMID:26607202, PMID:21873635 RGD:13792537 NCBI chr11:74,421,569...74,436,728 JBrowse link
G Cldn10 claudin 10 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:95,862,785...95,954,526 JBrowse link
G Cldn11 claudin 11 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:112,207,745...112,221,050 JBrowse link
G Cldn14 claudin 14 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:33,232,281...33,329,440 JBrowse link
G Cldn15 claudin 15 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:19,698,169...19,708,419 JBrowse link
G Cldn16 claudin 16 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:74,290,298...74,309,588 JBrowse link
G Cldn17 claudin 17 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:27,827,454...27,828,630 JBrowse link
G Cldn18 claudin 18 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:100,246,499...100,265,797 JBrowse link
G Cldn19 claudin 19 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:132,862,939...132,870,364 JBrowse link
G Cldn2 claudin 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:103,459,870...103,473,794 JBrowse link
G Cldn20 claudin 20 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:44,133,769...44,134,428 JBrowse link
G Cldn22 claudin 22 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:44,422,345...44,423,354 JBrowse link
G Cldn23 claudin 23 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:56,413,677...56,415,401 JBrowse link
G Cldn24 claudin 24 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:44,424,810...44,425,472 JBrowse link
G Cldn25 claudin 25 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:49,391,975...49,392,664 JBrowse link
G Cldn3 claudin 3 involved_in ISO
IBA
(PMID:25849148)
PMID:21873635
RGD PMID:25849148, PMID:21873635 RGD:13792537 NCBI chr12:21,708,538...21,710,010 JBrowse link
G Cldn34a claudin 34A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:21,717,101...21,737,363 JBrowse link
G Cldn34b claudin 34B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:40,517,494...40,523,518 JBrowse link
G Cldn34c4 claudin 34C4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:90,129,724...90,135,400 JBrowse link
G Cldn34d claudin 34D involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:40,594,666...40,603,146 JBrowse link
G Cldn34e claudin 34E involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:41,741,375...41,748,930 JBrowse link
G Cldn4 claudin 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:21,751,638...21,753,436 JBrowse link
G Cldn5 claudin 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:82,212,822...82,214,248 JBrowse link
G Cldn6 claudin 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:12,710,302...12,713,987 JBrowse link
G Cldn7 claudin 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:54,689,684...54,692,177 JBrowse link
G Cldn8 claudin 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:27,875,857...27,878,106 JBrowse link
G Cldn9 claudin 9 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:12,714,137...12,715,568 JBrowse link
G Ctnnb1 catenin beta 1 involved_in ISO (PMID:8636221) RGD PMID:8636221 NCBI chr 8:120,640,008...120,667,110 JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in ISO
IEA
(PMID:17332497)
GO_REF:0000107
RGD
Ensembl
PMID:17332497 GO_REF:0000107 NCBI chr11:68,911,883...69,103,230 JBrowse link
G Ect2 epithelial cell transforming 2 involved_in ISO (PMID:15254234) RGD PMID:15254234 NCBI chr 2:109,975,813...110,037,911 JBrowse link
G Esam endothelial cell adhesion molecule involved_in ISO (PMID:26607202) RGD PMID:26607202 NCBI chr 8:37,238,228...37,249,217 JBrowse link
G Frmpd2 FERM and PDZ domain containing 2 involved_in ISO (PMID:19706687) RGD PMID:19706687 NCBI chr16:8,757,642...8,877,307 JBrowse link
G Grhl2 grainyhead-like transcription factor 2 involved_in ISO (PMID:25152456) RGD PMID:25152456 NCBI chr 7:68,400,287...68,530,269 JBrowse link
G Itgb1 integrin subunit beta 1 IMP RGD PMID:18579774 RGD:2325293 NCBI chr19:56,705,123...56,753,199 JBrowse link
G LOC100362173 rCG36365-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:40,450,349...40,483,399 JBrowse link
G LOC102554799 uncharacterized LOC102554799 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:62,165...67,003 JBrowse link
G LOC680190 hypothetical protein LOC680190 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:40,276,745...40,281,540 JBrowse link
G LOC685699 hypothetical protein LOC685699 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:21,798,460...21,803,412 JBrowse link
G LOC685747 hypothetical protein LOC685747 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:22,376,690...22,379,601 JBrowse link
G LOC685762 hypothetical protein LOC685762 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:22,434,268...22,437,212 JBrowse link
G LOC685789 hypothetical protein LOC685789 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:22,866,302...22,922,946 JBrowse link
G Marveld2 MARVEL domain containing 2 involved_in ISO (PMID:20164257), (PMID:23073616) RGD PMID:20164257 PMID:23073616 NCBI chr 2:31,742,652...31,764,150 JBrowse link
G Marveld3 MARVEL domain containing 3 involved_in IBA
ISO
PMID:21873635
(PMID:20164257)
RGD PMID:20164257, PMID:21873635 RGD:13792537 NCBI chr19:37,908,727...37,923,420 JBrowse link
G Micall2 MICAL-like 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5508599|PMID:18094055)
UniProt
RGD
PMID:18094055 GO_REF:0000024 MGI:5508599 NCBI chr12:14,899,151...14,927,949 JBrowse link
G Mpp7 membrane palmitoylated protein 7 involved_in ISO (PMID:17332497) RGD PMID:17332497 NCBI chr17:55,439,939...55,706,810 JBrowse link
G Mtdh metadherin IEP RGD PMID:15383321 RGD:1359738 NCBI chr 7:65,306,464...65,365,647 JBrowse link
G Ocln occludin involved_in ISO (PMID:20164257), (PMID:26607202) RGD PMID:20164257 PMID:26607202 NCBI chr 2:31,657,217...31,707,466 JBrowse link
G Pak2 p21 (RAC1) activated kinase 2 involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr11:68,708,070...68,766,622 JBrowse link
G Pard3 par-3 family cell polarity regulator involved_in IMP PMID:18082612 UniProt PMID:18082612 RGD:8553352 NCBI chr19:55,080,282...55,630,111 JBrowse link
G Pdcd6ip programmed cell death 6 interacting protein involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5819325|PMID:27336173)
UniProt
Ensembl
RGD
PMID:27336173 GO_REF:0000024 GO_REF:0000107 MGI:5819325 NCBI chr 8:113,590,998...113,646,795 JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 involved_in ISO (PMID:26607202) RGD PMID:26607202 NCBI chr10:91,590,521...91,652,279 JBrowse link
G Pof1b POF1B, actin binding protein involved_in ISO (PMID:21940798) RGD PMID:21940798 NCBI chr  X:77,683,128...77,749,827 JBrowse link
G Rab13 RAB13, member RAS oncogene family involved_in ISS
ISO
GO_REF:0000024
(PMID:12058051), (PMID:15096524)
UniProt
RGD
PMID:12058051 PMID:15096524 GO_REF:0000024 NCBI chr 2:175,674,894...175,680,043 JBrowse link
G Ramp2 receptor activity modifying protein 2 involved_in ISO
ISS
(PMID:18097473)
(MGI:3772552|PMID:18097473)
GO_REF:0000024
RGD
UniProt
PMID:18097473 GO_REF:0000024 MGI:3772552 NCBI chr10:86,187,366...86,190,692 JBrowse link
G Samt3 spermatogenesis associated multipass transmembrane protein 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:50,571,864...50,574,698 JBrowse link
G Samt4 spermatogenesis associated multipass transmembrane protein 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:22,676,830...22,679,573 JBrowse link
G Srf serum response factor acts_upstream_of_or_within ISO MGI:2445832|MGI:3522206 (MGI:4421610|PMID:20047077) RGD PMID:20047077 MGI:4421610 NCBI chr 9:14,426,453...14,435,734 JBrowse link
G Tbcd tubulin folding cofactor D involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:106,717,340...106,874,126 JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO (PMID:8636221) RGD PMID:8636221 NCBI chr 1:118,849,838...119,094,492 JBrowse link
G Wnt11 Wnt family member 11 acts_upstream_of_or_within ISO MGI:2665014 (MGI:3759355|PMID:17767158) RGD PMID:17767158 MGI:3759355 NCBI chr 1:153,134,503...153,154,294 JBrowse link
cell-cell junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07034767.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Arvcf ARVCF, delta catenin family member involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:82,588,137...82,645,805 JBrowse link
G Cdh10 cadherin 10 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:68,628,623...68,850,995 JBrowse link
G Cdh11 cadherin 11 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:2,148,447...2,305,754 JBrowse link
G Cdh12 cadherin 12 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:70,474,679...71,705,369 JBrowse link
G Cdh18 cadherin 18 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:72,818,076...73,820,144 JBrowse link
G Cdh19 cadherin 19 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:27,935,915...28,047,490 JBrowse link
G Cdh2 cadherin 2 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:6216737|PMID:26750727)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:26750727 GO_REF:0000024 GO_REF:0000107 MGI:6216737 NCBI chr18:7,776,704...7,990,934 JBrowse link
G Cdh20 cadherin 20 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:20,737,640...21,069,746 JBrowse link
G Cdh22 cadherin 22 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:153,845,563...153,970,630 JBrowse link
G Cdh24 cadherin 24 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:28,091,578...28,101,330 JBrowse link
G Cdh5 cadherin 5 involved_in IBA
ISO
PMID:21873635
(PMID:23288152)
RGD PMID:23288152, PMID:21873635 RGD:13792537 NCBI chr19:815,415...854,478 JBrowse link
G Cdh6 cadherin 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:62,079,139...62,225,228 JBrowse link
G Cdh7 cadherin 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:26,672,058...26,821,571 JBrowse link
G Cdh8 cadherin 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:5,494,038...5,901,810 JBrowse link
G Cdh9 cadherin 9 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:66,280,422...66,367,121 JBrowse link
G Cldn5 claudin 5 involved_in ISO (PMID:23288152) RGD PMID:23288152 NCBI chr11:82,212,822...82,214,248 JBrowse link
G Ctnnd1 catenin delta 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:69,683,328...69,734,550 JBrowse link
G Ctnnd2 catenin delta 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:81,168,976...82,016,495 JBrowse link
G Dchs1 dachsous cadherin-related 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:160,104,931...160,138,958 JBrowse link
G Flcn folliculin involved_in ISS
ISO
GO_REF:0000024
(MGI:5487492|PMID:22965878)
UniProt
RGD
PMID:22965878 GO_REF:0000024 MGI:5487492 NCBI chr10:44,588,621...44,607,808 JBrowse link
G Fscn1 fascin actin-bundling protein 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:9571235)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:9571235 GO_REF:0000024 GO_REF:0000107 NCBI chr12:11,597,042...11,610,183 JBrowse link
G Hdac7 histone deacetylase 7 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3693627 (MGI:3692697|PMID:16873063)
Ensembl
RGD
PMID:16873063 GO_REF:0000107 MGI:3692697 NCBI chr 7:128,923,918...128,962,025 JBrowse link
G Heg1 heart development protein with EGF-like domains 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr11:67,006,954...67,095,020 JBrowse link
G Lin7b lin-7 homolog B, crumbs cell polarity complex component NAS RGD PMID:10362251 RGD:633233 NCBI chr 1:95,846,888...95,849,628 JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 involved_in ISO (MGI:3620334|PMID:16473946) RGD PMID:16473946 MGI:3620334 NCBI chr 7:23,846,122...23,942,085 JBrowse link
G Pard6b par-6 family cell polarity regulator beta involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:156,790,540...156,811,620 JBrowse link
G Pkp1 plakophilin 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:47,309,603...47,357,551 JBrowse link
G Pkp3 plakophilin 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:196,187,835...196,198,844 JBrowse link
G Pkp4 plakophilin 4 involved_in IBA
ISO
PMID:21873635
(MGI:5487492|PMID:22965878)
RGD PMID:22965878, PMID:21873635 MGI:5487492, RGD:13792537 NCBI chr 3:43,632,364...43,835,834 JBrowse link
G Trpv4 transient receptor potential cation channel, subfamily V, member 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:4820667|PMID:20413591)
UniProt
RGD
PMID:20413591 GO_REF:0000024 MGI:4820667 NCBI chr12:41,938,533...41,977,517 JBrowse link
cell-cell junction maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd177 CD177 molecule involved_in ISO
IBA
(PMID:23202369)
PMID:21873635
RGD PMID:23202369, PMID:21873635 RGD:13792537 NCBI chr 1:80,340,034...80,360,599 JBrowse link
G Csf1r colony stimulating factor 1 receptor involved_in ISO (PMID:15117969) RGD PMID:15117969 NCBI chr18:54,546,673...54,590,418 JBrowse link
G F2r coagulation factor II (thrombin) receptor involved_in ISO
IEA
(PMID:23202369)
GO_REF:0000107
RGD
Ensembl
PMID:23202369 GO_REF:0000107 NCBI chr 2:26,869,343...26,885,856 JBrowse link
G F2rl1 F2R like trypsin receptor 1 involved_in ISO (PMID:23202369) RGD PMID:23202369 NCBI chr 2:26,772,274...26,785,226 JBrowse link
G LOC681077 similar to testis expressed gene 101 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:80,308,234...80,312,967 JBrowse link
G Mpz myelin protein zero acts_upstream_of_or_within ISO MGI:2384133 (MGI:2156968|PMID:11749037) RGD PMID:11749037 MGI:2156968 NCBI chr13:83,570,811...83,576,680 JBrowse link
G Myadm myeloid-associated differentiation marker NOT|involved_in ISO (PMID:23264465) RGD PMID:23264465 NCBI chr 1:65,864,180...65,874,701 JBrowse link
G Pard6a par-6 family cell polarity regulator alpha involved_in IEA
ISO
GO_REF:0000107
(MGI:3687818|PMID:10954424)
Ensembl
RGD
PMID:10954424 GO_REF:0000107 MGI:3687818 NCBI chr19:33,589,583...33,591,900 JBrowse link
G Prtn3 proteinase 3 involved_in ISO (PMID:23202369) RGD PMID:23202369 NCBI chr 7:9,822,123...9,831,300 JBrowse link
G RGD1564380 similar to BC049730 protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:80,273,019...80,278,238 JBrowse link
G RGD1565655 similar to BC049730 protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:80,323,188...80,328,311 JBrowse link
G Shroom2 shroom family member 2 acts_upstream_of_or_within ISO (MGI:3723326|PMID:17666436) RGD PMID:17666436 MGI:3723326 NCBI chr  X:21,812,469...21,983,724 JBrowse link
desmosome assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07034767.1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Jup junction plakoglobin involved_in
acts_upstream_of_or_within
ISO (PMID:20859650), (PMID:9049256)
MGI:1857539 (MGI:1314706|PMID:9847250), (MGI:3843580|PMID:18496566), (MGI:85439|PMID:8954745)
RGD PMID:8954745 PMID:9049256 PMID:9847250 PMID:18496566 PMID:20859650 MGI:1314706 MGI:3843580 MGI:85439 NCBI chr10:85,300,438...85,327,378 JBrowse link
G Pkp2 plakophilin 2 involved_in ISO (PMID:18474624) RGD PMID:18474624 NCBI chr11:84,661,783...84,727,730 JBrowse link
G Pkp3 plakophilin 3 involved_in ISO (PMID:20859650) RGD PMID:20859650 NCBI chr 1:196,187,835...196,198,844 JBrowse link
G Prkca protein kinase C, alpha involved_in ISO
IEA
(PMID:18474624)
GO_REF:0000107
RGD
Ensembl
PMID:18474624 GO_REF:0000107 NCBI chr10:92,889,390...93,288,013 JBrowse link
desmosome disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snai2 snail family transcriptional repressor 2 involved_in ISO (PMID:9182671)
(MGI:892810|PMID:9182671)
RGD PMID:9182671 MGI:892810 NCBI chr11:86,183,800...86,186,109 JBrowse link
desmosome organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07034767.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Dsg2 desmoglein 2 involved_in ISO (PMID:16505173) RGD PMID:16505173 NCBI chr18:11,846,207...11,904,630 JBrowse link
G Dsp desmoplakin involved_in
acts_upstream_of_or_within
ISO (MGI:3723417|PMID:16917092)
MGI:2182575 (MGI:1327099|PMID:9864371)
RGD PMID:9864371 PMID:16917092 MGI:1327099 MGI:3723417 NCBI chr17:26,623,602...26,671,692 JBrowse link
G Grhl1 grainyhead-like transcription factor 1 acts_upstream_of_or_within ISO MGI:3778923 (MGI:5585711|PMID:24586629) RGD PMID:24586629 MGI:5585711 NCBI chr 6:41,207,325...41,257,516 JBrowse link
G Nectin1 nectin cell adhesion molecule 1 acts_upstream_of_or_within ISO MGI:3814719 (MGI:3814115|PMID:18703497) RGD PMID:18703497 MGI:3814115 NCBI chr 8:44,101,776...44,164,863 JBrowse link
G Perp p53 apoptosis effector related to PMP22 acts_upstream_of_or_within ISO MGI:2683069 (MGI:5317035|PMID:21285247) RGD PMID:21285247 MGI:5317035 NCBI chr 1:13,542,067...13,554,514 JBrowse link
gap junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnna1 catenin alpha 1 IMP RGD PMID:12577316 RGD:2289808 NCBI chr18:26,728,246...26,860,911 JBrowse link
G Gja1 gap junction protein, alpha 1 involved_in TAS PMID:15709751 UniProt PMID:15709751 RGD:8554661 NCBI chr20:35,756,007...35,768,481 JBrowse link
G Gja5 gap junction protein, alpha 5 involved_in ISO (PMID:16790700), (PMID:22247482), (PMID:23348765) RGD PMID:16790700 PMID:22247482 PMID:23348765 NCBI chr 2:184,602,407...184,621,952 JBrowse link
G Gjb2 gap junction protein, beta 2 involved_in
acts_upstream_of_or_within
ISO (PMID:12767933)
(MGI:5568196|PMID:24590285)
RGD PMID:12767933 PMID:24590285 MGI:5568196 NCBI chr15:31,260,390...31,278,222 JBrowse link
G Gjb6 gap junction protein, beta 6 involved_in ISO (PMID:19285977) RGD PMID:19285977 NCBI chr15:31,284,562...31,295,010 JBrowse link
G Gjc1 gap junction protein, gamma 1 involved_in ISO (MGI:5544102|PMID:22982984) RGD PMID:22982984 MGI:5544102 NCBI chr10:87,758,192...87,785,443 JBrowse link
G Gjd3 gap junction protein, delta 3 involved_in ISO (PMID:12154091) RGD PMID:12154091 NCBI chr10:83,933,694...83,935,759 JBrowse link
G Pkp2 plakophilin 2 IMP RGD PMID:17673670 RGD:6784510 NCBI chr11:84,661,783...84,727,730 JBrowse link
negative regulation of adherens junction organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp6 bone morphogenetic protein 6 involved_in ISO (PMID:26598555) RGD PMID:26598555 NCBI chr17:26,318,121...26,469,034 JBrowse link
G Rdx radixin involved_in ISO (PMID:22467863) RGD PMID:22467863 NCBI chr 8:52,379,494...52,437,673 JBrowse link
G Vegfa vascular endothelial growth factor A involved_in ISO (PMID:26598555) RGD PMID:26598555 NCBI chr 9:14,955,300...14,970,641 JBrowse link
negative regulation of bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta involved_in ISO
IEA
(PMID:25816133)
GO_REF:0000107
RGD
Ensembl
PMID:25816133 GO_REF:0000107 NCBI chr16:69,319,487...69,373,251 JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:O75116 (PMID:25816133)
Ensembl
RGD
PMID:25816133 GO_REF:0000107 NCBI chr18:1,114,532...1,236,345 JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:Q13464 (PMID:25816133)
Ensembl
RGD
PMID:25816133 GO_REF:0000107 NCBI chr 6:39,679,116...39,774,033 JBrowse link
G Rps6 ribosomal protein S6 IDA RGD PMID:25217631 RGD:11041641 NCBI chr 5:101,371,716...101,374,576 JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:25816133) RGD PMID:25816133 NCBI chr20:3,622,011...3,624,629 JBrowse link
negative regulation of gap junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace angiotensin I converting enzyme involved_in IEA
ISO
GO_REF:0000107
(MGI:5607357|PMID:25017399)
Ensembl
RGD
PMID:25017399 GO_REF:0000107 MGI:5607357 NCBI chr10:90,910,316...90,930,437 JBrowse link
G Il1b interleukin 1 beta involved_in IEA
ISO
GO_REF:0000107
(PMID:11090614)
Ensembl
RGD
PMID:11090614 GO_REF:0000107 NCBI chr 3:116,577,005...116,583,386 JBrowse link
G Mir23a microRNA 23a IMP RGD PMID:25798059 RGD:13592600 NCBI chr19:23,954,997...23,955,071 JBrowse link
paranodal junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 IEP RGD PMID:16687515 RGD:1599119 NCBI chr 2:215,378,028...215,954,015 JBrowse link
G Cd9 CD9 molecule involved_in ISS
ISO
GO_REF:0000024
(MGI:3027661|PMID:14715942)
UniProt
RGD
PMID:14715942 GO_REF:0000024 MGI:3027661 NCBI chr 4:158,256,328...158,289,136 JBrowse link
G Cntnap1 contactin associated protein 1 involved_in ISS
ISO
TAS
GO_REF:0000024
(MGI:3621602|PMID:16551741), (MGI:4838147|PMID:19816196)
(PMID:27818385)
PMID:19166515
BHF-UCL
RGD
PMID:16551741 PMID:19816196 PMID:27818385, PMID:19166515 GO_REF:0000024 MGI:3621602 MGI:4838147, RGD:6483326 NCBI chr10:86,109,850...86,125,612 JBrowse link
G Epb41l3 erythrocyte membrane protein band 4.1-like 3 involved_in ISO (MGI:5296417|PMID:21966409) RGD PMID:21966409 MGI:5296417 NCBI chr 9:109,056,178...109,260,607 JBrowse link
G Gnpat glyceronephosphate O-acyltransferase acts_upstream_of_or_within ISO MGI:2670461 (MGI:3843561|PMID:19270340) RGD PMID:19270340 MGI:3843561 NCBI chr19:52,822,326...52,848,872 JBrowse link
G Nfasc neurofascin acts_upstream_of_or_within
involved_in
ISO MGI:3808598|MGI:4837620 (MGI:3621515|PMID:16337912), (MGI:4452171|PMID:20371806)
(MGI:3836161|PMID:19185024)
RGD PMID:16337912 PMID:19185024 PMID:20371806 MGI:3621515 MGI:3836161 MGI:4452171 NCBI chr13:43,997,223...44,183,863 JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO MGI:3614822 (MGI:3613258|PMID:16436605) RGD PMID:16436605 MGI:3613258 NCBI chr10:47,795,709...47,825,715 JBrowse link
G Ugt8 UDP glycosyltransferase 8 involved_in ISO (MGI:3621602|PMID:16551741) RGD PMID:16551741 MGI:3621602 NCBI chr 2:214,264,483...214,332,769 JBrowse link
paranodal junction maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Whrn whirlin involved_in IEA
ISO
GO_REF:0000107
(MGI:5516521|PMID:24011083)
Ensembl
RGD
PMID:24011083 GO_REF:0000107 MGI:5516521 NCBI chr 5:76,828,308...76,911,945 JBrowse link
positive regulation of adherens junction organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Add1 adducin 1 involved_in IBA
ISO
IEA
PMID:21873635
(MGI:5796260|PMID:25978380)
GO_REF:0000107
(PMID:25978380)
RGD
Ensembl
PMID:25978380, PMID:21873635 GO_REF:0000107 MGI:5796260, RGD:13792537 NCBI chr14:76,108,643...76,167,267 JBrowse link
G Ptpn23 protein tyrosine phosphatase, non-receptor type 23 involved_in IEA
ISO
GO_REF:0000107
(PMID:21724833)
Ensembl
RGD
PMID:21724833 GO_REF:0000107 NCBI chr 8:110,360,804...110,383,271 JBrowse link
positive regulation of bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cldn1 claudin 1 IMP RGD PMID:22684624 RGD:11341733 NCBI chr11:74,421,569...74,436,728 JBrowse link
G Cldn3 claudin 3 involved_in ISO (PMID:20655293) RGD PMID:20655293 NCBI chr12:21,708,538...21,710,010 JBrowse link
G Cldn5 claudin 5 involved_in ISO (PMID:25323998) RGD PMID:25323998 NCBI chr11:82,212,822...82,214,248 JBrowse link
G Epha2 Eph receptor A2 involved_in ISO (PMID:27815408) RGD PMID:27815408 NCBI chr 5:153,605,644...153,634,115 JBrowse link
G Gcg glucagon involved_in ISO (PMID:25050009) RGD PMID:25050009 NCBI chr 3:47,113,914...47,122,929 JBrowse link
G Il17a interleukin 17A involved_in IEA
ISO
GO_REF:0000107
(MGI:5788042|PMID:26431948)
Ensembl
RGD
PMID:26431948 GO_REF:0000107 MGI:5788042 NCBI chr 9:23,144,402...23,147,889 JBrowse link
G Nphp1 nephrocystin 1 involved_in ISO
IEA
(PMID:19755384)
GO_REF:0000107
RGD
Ensembl
PMID:19755384 GO_REF:0000107 NCBI chr 3:114,960,650...115,016,234 JBrowse link
G Nphp4 nephrocystin 4 involved_in ISO (PMID:19755384) RGD PMID:19755384 NCBI chr 5:162,986,157...163,073,708 JBrowse link
positive regulation of gap junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace2 angiotensin I converting enzyme 2 involved_in ISO
IEA
(PMID:12967627)
GO_REF:0000107
RGD
Ensembl
PMID:12967627 GO_REF:0000107 NCBI chr  X:30,293,597...30,340,961 JBrowse link
G Agt angiotensinogen involved_in ISO UniProtKB:P00797 (PMID:17416596) RGD PMID:17416596 NCBI chr19:52,529,139...52,549,618 JBrowse link
G Cav1 caveolin 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:5607357|PMID:25017399)
Ensembl
RGD
PMID:25017399 GO_REF:0000107 MGI:5607357 NCBI chr 4:45,640,624...45,673,708 JBrowse link
G Cntnap2 contactin associated protein 2 involved_in ISO (PMID:33238150) RGD PMID:33238150 NCBI chr 4:74,109,455...76,366,434 JBrowse link
G Irx3 iroquois homeobox 3 involved_in ISO (MGI:5288100|PMID:21825130), (MGI:6101691|PMID:26786475) RGD PMID:21825130 PMID:26786475 MGI:5288100 MGI:6101691 NCBI chr19:15,211,882...15,215,323 JBrowse link
G Tbx5 T-box transcription factor 5 involved_in IEA
ISO
GO_REF:0000107
(MGI:5449667|PMID:22728936)
Ensembl
RGD
PMID:22728936 GO_REF:0000107 MGI:5449667 NCBI chr12:36,686,344...36,739,253 JBrowse link
positive regulation of tight junction disassembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc8 ATP binding cassette subfamily C member 8 IMP RGD PMID:23633925 RGD:12791991 NCBI chr 1:96,598,663...96,679,495 JBrowse link
G Tgfb3 transforming growth factor, beta 3 involved_in ISO (PMID:18718461) RGD PMID:18718461 NCBI chr 6:105,704,058...105,726,661 JBrowse link
G Tgfbr1 transforming growth factor, beta receptor 1 involved_in ISO UniProtKB:P10600 (MGI:3820811|PMID:18718461) RGD PMID:18718461 MGI:3820811 NCBI chr 5:61,653,773...61,710,777 JBrowse link
regulation of bicellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G F11r F11 receptor involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr13:83,873,797...83,897,388 JBrowse link
G Fzd5 frizzled class receptor 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3583769 (MGI:5494335|PMID:23610556)
Ensembl
RGD
PMID:23610556 GO_REF:0000107 MGI:5494335 NCBI chr 9:66,117,370...66,119,127 JBrowse link
G Gja1 gap junction protein, alpha 1 IMP RGD PMID:19509333 RGD:6784505 NCBI chr20:35,756,007...35,768,481 JBrowse link
G Gpbar1 G protein-coupled bile acid receptor 1 involved_in ISO (MGI:5297273|PMID:22046243) RGD PMID:22046243 MGI:5297273 NCBI chr 9:75,862,151...75,863,140 JBrowse link
G Myo1c myosin 1C involved_in ISO (PMID:21402783) RGD PMID:21402783 NCBI chr10:60,498,374...60,520,752 JBrowse link
G Nedd4l NEDD4 like E3 ubiquitin protein ligase acts_upstream_of_or_within ISO (MGI:4819049|PMID:20504882) RGD PMID:20504882 MGI:4819049 NCBI chr18:58,393,759...58,726,709 JBrowse link
G Pkp2 plakophilin 2 IMP RGD PMID:19509333 RGD:6784505 NCBI chr11:84,661,783...84,727,730 JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha involved_in ISO
IEA
(PMID:15905176)
GO_REF:0000107
RGD
Ensembl
PMID:15905176 GO_REF:0000107 NCBI chr19:24,155,081...24,178,430 JBrowse link
G Prkch protein kinase C, eta involved_in ISO
ISS
(PMID:19114660)
GO_REF:0000024
RGD
UniProt
PMID:19114660 GO_REF:0000024 NCBI chr 6:92,292,000...92,490,663 JBrowse link
G Snai1 snail family transcriptional repressor 1 involved_in ISO (PMID:15314165) RGD PMID:15314165 NCBI chr 3:156,248,479...156,252,969 JBrowse link
G Snai2 snail family transcriptional repressor 2 involved_in ISO (PMID:15314165) RGD PMID:15314165 NCBI chr11:86,183,800...86,186,109 JBrowse link
G Tjp1 tight junction protein 1 involved_in ISO (PMID:25753039) RGD PMID:25753039 NCBI chr 1:118,849,838...119,094,492 JBrowse link
regulation of gap junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aplnr apelin receptor acts_upstream_of_or_within ISO (MGI:5584055|PMID:23603510) RGD PMID:23603510 MGI:5584055 NCBI chr 3:70,217,407...70,221,052 JBrowse link
slit diaphragm assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptpro protein tyrosine phosphatase, receptor type, O involved_in ISS
ISO
GO_REF:0000024
(MGI:1927435|PMID:11086029)
UniProt
RGD
PMID:11086029 GO_REF:0000024 MGI:1927435 NCBI chr 4:170,164,071...170,374,790 JBrowse link
tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actg1 actin, gamma 1 involved_in ISO (PMID:22855531) RGD PMID:22855531 NCBI chr10:105,619,738...105,622,587 JBrowse link
G Cldn11 claudin 11 involved_in ISO
IEA
(PMID:30734065)
GO_REF:0000107
RGD
Ensembl
PMID:30734065 GO_REF:0000107 NCBI chr 2:112,207,745...112,221,050 JBrowse link
G Cldn12 claudin 12 NOT|involved_in ISO (MGI:6368067|PMID:31511021) RGD PMID:31511021 MGI:6368067 NCBI chr 4:28,522,659...28,533,647 JBrowse link
G Cldn5 claudin 5 involved_in ISO (MGI:6369916|PMID:30734065) RGD PMID:30734065 MGI:6369916 NCBI chr11:82,212,822...82,214,248 JBrowse link
G Ephb2 Eph receptor B2 IDA RGD PMID:33722292 RGD:127285641 NCBI chr 5:148,889,574...149,077,027 JBrowse link
G Mpdz multiple PDZ domain crumbs cell polarity complex component involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:95,766,112...95,920,531 JBrowse link
G Patj PATJ, crumbs cell polarity complex component involved_in ISO
IBA
ISS
(PMID:15738264)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:15738264, PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr 5:113,061,985...113,364,807 JBrowse link
tight junction organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cldn19 claudin 19 acts_upstream_of_or_within ISO MGI:3583804 (MGI:3583407|PMID:15883201) RGD PMID:15883201 MGI:3583407 NCBI chr 5:132,862,939...132,870,364 JBrowse link
G Cldn9 claudin 9 acts_upstream_of_or_within ISO (MGI:3696284|PMID:17130295) RGD PMID:17130295 MGI:3696284 NCBI chr10:12,714,137...12,715,568 JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (MGI:5766597|PMID:26024086) RGD PMID:26024086 MGI:5766597 NCBI chr 7:84,375,769...84,654,625 JBrowse link
G Ocln occludin involved_in ISO (MGI:6369916|PMID:30734065) RGD PMID:30734065 MGI:6369916 NCBI chr 2:31,657,217...31,707,466 JBrowse link
G Plec plectin involved_in ISO
IEA
MGI:3721885 (MGI:5790023|PMID:26519478)
GO_REF:0000107
RGD
Ensembl
PMID:26519478 GO_REF:0000107 MGI:5790023 NCBI chr 7:107,887,764...107,949,100 JBrowse link
G Svep1 sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:5286317 (MGI:5913245|PMID:28179432)
Ensembl
RGD
PMID:28179432 GO_REF:0000107 MGI:5913245 NCBI chr 5:72,811,200...72,988,813 JBrowse link
tricellular tight junction assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lsr lipolysis stimulated lipoprotein receptor involved_in ISO (MGI:5700290|PMID:22671589), (MGI:6316553|PMID:21245199) RGD PMID:21245199 PMID:22671589 MGI:5700290 MGI:6316553 NCBI chr 1:86,185,769...86,201,952 JBrowse link
zonula adherens assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi2 abl-interactor 2 involved_in ISO (PMID:15572692) RGD PMID:15572692 NCBI chr 9:61,856,379...61,904,029 JBrowse link
G Dlg5 discs large MAGUK scaffold protein 5 acts_upstream_of_or_within ISO MGI:3757646 (MGI:3722974|PMID:17765678) RGD PMID:17765678 MGI:3722974 NCBI chr15:75,786...209,735 JBrowse link
zonula adherens maintenance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camsap3 calmodulin regulated spectrin-associated protein family, member 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:19041755)
UniProt
RGD
PMID:19041755 GO_REF:0000024 NCBI chr12:1,643,062...1,666,685 JBrowse link
G Kifc3 kinesin family member C3 involved_in ISO (PMID:19041755) RGD PMID:19041755 NCBI chr19:9,825,208...9,920,371 JBrowse link
G Plekha7 pleckstrin homology domain containing A7 involved_in IBA
ISO
PMID:21873635
(PMID:19041755)
RGD PMID:19041755, PMID:21873635 RGD:13792537 NCBI chr 1:170,364,524...170,547,843 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    cellular process 18342
      cellular component organization or biogenesis 6723
        cellular component organization 6483
          cell junction organization 798
            cell-cell junction organization 229
              adherens junction organization + 52
              cell-cell junction assembly + 167
              cell-cell junction disassembly + 4
              cell-cell junction maintenance + 22
              desmosome organization + 11
              plasmodesma organization 0
              tight junction organization + 104
paths to the root