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ONTOLOGY REPORT - ANNOTATIONS


Term:establishment of epithelial cell apical/basal polarity
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Accession:GO:0045198 term browser browse the term
Definition:The specification and formation of the apicobasal polarity of an epithelial cell.



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establishment of epithelial cell apical/basal polarity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camsap3 calmodulin regulated spectrin-associated protein family, member 3 involved_in ISO (PMID:26715742), (PMID:27802168)
(MGI:5754645|PMID:26715742)
RGD PMID:26715742 PMID:27802168 MGI:5754645 NCBI chr12:1,643,062...1,666,685
Ensembl chr12:1,643,251...1,666,685
JBrowse link
G Cdc42 cell division cycle 42 involved_in ISS
ISO
GO_REF:0000024
(PMID:22891260)
UniProt
RGD
PMID:22891260 GO_REF:0000024 NCBI chr 5:149,555,069...149,593,239
Ensembl chr 5:149,553,724...149,593,111
JBrowse link
G Ezr ezrin NOT|involved_in ISO (PMID:22797597), (PMID:24862762) RGD PMID:22797597 PMID:24862762 NCBI chr 1:46,967,961...47,011,505
Ensembl chr 1:46,967,658...47,011,505
JBrowse link
G Foxf1 forkhead box F1 acts_upstream_of_or_within ISO MGI:1347479 (MGI:3617131|PMID:16439479) RGD PMID:16439479 MGI:3617131 NCBI chr19:49,153,729...49,157,741
Ensembl chr19:49,153,699...49,157,738
JBrowse link
G Ift20 intraflagellar transport 20 acts_upstream_of_or_within ISO MGI:3817268 (MGI:5615303|PMID:25605782) RGD PMID:25605782 MGI:5615303 NCBI chr10:63,432,597...63,438,125
Ensembl chr10:63,432,633...63,438,124
JBrowse link
G Lama1 laminin subunit alpha 1 acts_upstream_of_or_within ISO MGI:3530455 (MGI:3529401|PMID:15668394) RGD PMID:15668394 MGI:3529401 NCBI chr 9:107,692,770...107,816,847
Ensembl chr 9:107,692,770...107,817,478
JBrowse link
G Msn moesin involved_in ISO
IEA
(PMID:24862762)
GO_REF:0000107
RGD
Ensembl
PMID:24862762 GO_REF:0000107 NCBI chr  X:60,996,043...61,064,011
Ensembl chr  X:60,995,951...61,065,628
JBrowse link
G Myo9a myosin IXA involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:22891260)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:22891260 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:60,149,234...60,348,726
Ensembl chr 8:60,149,234...60,350,514
JBrowse link
G Ophn1 oligophrenin 1 involved_in ISO
ISS
(PMID:22891260)
GO_REF:0000024
RGD
UniProt
PMID:22891260 GO_REF:0000024 NCBI chr  X:63,599,746...63,976,678
Ensembl chr  X:63,603,042...63,976,633
JBrowse link
G Ptk7 protein tyrosine kinase 7 acts_upstream_of_or_within ISO MGI:3046905 (MGI:3046397|PMID:15229603) RGD PMID:15229603 MGI:3046397 NCBI chr 9:14,352,155...14,418,494
Ensembl chr 9:14,351,202...14,418,494
JBrowse link
G Rap2a RAP2A, member of RAS oncogene family NOT|involved_in ISO (PMID:22797597) RGD PMID:22797597 NCBI chr15:97,596,848...97,597,338
Ensembl chr15:97,596,020...97,624,138
JBrowse link
G Rhoa ras homolog family member A involved_in ISO
ISS
(PMID:22891260)
GO_REF:0000024
RGD
UniProt
PMID:22891260 GO_REF:0000024 NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
JBrowse link
G Sh3bp1 SH3-domain binding protein 1 involved_in ISO
ISS
(PMID:22891260)
GO_REF:0000024
RGD
UniProt
PMID:22891260 GO_REF:0000024 NCBI chr 7:110,457,626...110,470,201
Ensembl chr 7:110,457,710...110,470,201
JBrowse link
G Slc9a3r1 SLC9A3 regulator 1 involved_in ISO (PMID:24862762) RGD PMID:24862762 NCBI chr10:100,403,189...100,420,290
Ensembl chr10:100,403,069...100,420,598
JBrowse link
G Spag6l sperm associated antigen 6-like acts_upstream_of_or_within ISO MGI:2662475 (MGI:5644628|PMID:25333478) RGD PMID:25333478 MGI:5644628 NCBI chr11:84,173,628...84,269,374
Ensembl chr11:84,173,526...84,269,364
JBrowse link
G Syne4 spectrin repeat containing nuclear envelope family member 4 involved_in ISS
IEA
ISO
IBA
GO_REF:0000024
GO_REF:0000107
(MGI:4441244|PMID:19164528)
PMID:21873635
UniProt
Ensembl
RGD
PMID:19164528 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:4441244, RGD:13792537 NCBI chr 1:85,569,409...85,573,775
Ensembl chr 1:85,569,545...85,573,760
JBrowse link
G Tcf15 transcription factor 15 acts_upstream_of_or_within ISO MGI:1929775 (MGI:5522599|PMID:24038871) RGD PMID:24038871 MGI:5522599 NCBI chr 3:140,638,984...140,644,766
Ensembl chr 3:140,638,984...140,644,766
JBrowse link
G Ttc8 tetratricopeptide repeat domain 8 acts_upstream_of_or_within ISO MGI:5140723 (MGI:5615303|PMID:25605782) RGD PMID:25605782 MGI:5615303 NCBI chr 6:118,198,186...118,252,422
Ensembl chr 6:118,198,201...118,252,418
JBrowse link
G Wnt5a Wnt family member 5A involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:101948 (MGI:5634837|PMID:25813538)
Ensembl
RGD
PMID:25813538 GO_REF:0000107 MGI:5634837 NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234
JBrowse link
establishment of epithelial cell apical/basal polarity involved in camera-type eye morphogenesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fat1 FAT atypical cadherin 1 involved_in ISO MGI:2662293 (MGI:5766588|PMID:26114487) RGD PMID:26114487 MGI:5766588 NCBI chr16:47,177,253...47,296,261
Ensembl chr16:47,177,248...47,296,107
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19497
    cellular process 18359
      establishment or maintenance of cell polarity 233
        establishment of cell polarity 152
          establishment of epithelial cell polarity 34
            establishment of epithelial cell apical/basal polarity 20
              establishment of epithelial cell apical/basal polarity involved in camera-type eye morphogenesis 1
              establishment of myocardial progenitor cell apical/basal polarity 0
Path 2
Term Annotations click to browse term
  biological_process 19497
    developmental process 6889
      anatomical structure development 6306
        anatomical structure morphogenesis 2911
          tissue morphogenesis 711
            morphogenesis of an epithelium 597
              morphogenesis of a polarized epithelium 88
                polarized epithelial cell differentiation 28
                  establishment of epithelial cell apical/basal polarity 20
                    establishment of epithelial cell apical/basal polarity involved in camera-type eye morphogenesis 1
                    establishment of myocardial progenitor cell apical/basal polarity 0
paths to the root