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ONTOLOGY REPORT - ANNOTATIONS


Term:apical cortex
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Accession:GO:0045179 term browser browse the term
Definition:The region that lies just beneath the plasma membrane on the apical edge of a cell.


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apical cortex term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07050543.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 5:168,845,058...168,845,415 JBrowse link
G Fabp1 fatty acid binding protein 1 IDA intestinal epithelial cells of fasted rats RGD PMID:10666570 RGD:1582399 NCBI chr 4:99,063,181...99,066,957
Ensembl chr 4:99,063,181...99,066,954
JBrowse link
G Fabp2 fatty acid binding protein 2 IDA RGD PMID:10666570 RGD:1582399 NCBI chr 2:227,080,912...227,083,654
Ensembl chr 2:227,080,924...227,083,501
JBrowse link
G Hamp hepcidin antimicrobial peptide IDA RGD PMID:15684344 RGD:1599359 NCBI chr 1:89,368,021...89,369,960
Ensembl chr 1:89,368,021...89,369,960
JBrowse link
G Insc INSC, spindle orientation adaptor protein IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:184,299,200...184,407,487
Ensembl chr 1:184,299,250...184,407,480
JBrowse link
G Khdc3 KH domain containing 3, subcortical maternal complex member ISO
IBA
(MGI:MGI:3771666|PMID:18057100)
PMID:21873635
RGD PMID:18057100, PMID:21873635 MGI:MGI:3771666, RGD:13792537 NCBI chr 8:79,781,941...79,783,845
Ensembl chr 8:79,781,983...79,783,592
JBrowse link
G Myo5b myosin Vb ISO
ISS
(PMID:21206382)
GO_REF:0000024
RGD
UniProt
PMID:21206382 GO_REF:0000024 NCBI chr18:70,426,865...70,729,985
Ensembl chr18:70,427,007...70,729,030
JBrowse link
G Nlrp5 NLR family, pyrin domain containing 5 ISO (MGI:MGI:3771666|PMID:18057100) RGD PMID:18057100 MGI:MGI:3771666 NCBI chr 1:71,452,184...71,490,915
Ensembl chr 1:71,453,798...71,486,790
JBrowse link
G Prkcz protein kinase C, zeta ISO (MGI:MGI:3582101|PMID:15950600) RGD PMID:15950600 MGI:MGI:3582101 NCBI chr 5:172,658,071...172,769,492
Ensembl chr 5:172,658,748...172,769,421
JBrowse link
G Sapcd2 suppressor APC domain containing 2 ISO (PMID:26766442)
(MGI:MGI:5882149|PMID:26766442)
RGD PMID:26766442 MGI:MGI:5882149 NCBI chr 3:2,590,355...2,597,283
Ensembl chr 3:2,591,331...2,596,583
JBrowse link
G Sptbn5 spectrin, beta, non-erythrocytic 5 ISO (MGI:MGI:3821785|PMID:18796539) RGD PMID:18796539 MGI:MGI:3821785 NCBI chr 3:111,833,411...111,875,551 JBrowse link
G Tchp trichoplein, keratin filament binding ISO (PMID:15731013) RGD PMID:15731013 NCBI chr12:47,638,278...47,653,602
Ensembl chr12:47,638,274...47,653,638
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 20610
    cellular anatomical entity 20359
      apical part of cell 499
        apical cortex 12
          apicomedial cortex 0
          raps-insc complex 0
Path 2
Term Annotations click to browse term
  cellular_component 20610
    cellular anatomical entity 20359
      intracellular anatomical structure 14705
        cytoplasm 11459
          cell cortex 353
            cell cortex region 55
              apical cortex 12
                apicomedial cortex 0
                raps-insc complex 0
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.