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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular extravasation
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Accession:GO:0045123 term browser browse the term
Definition:The migration of a leukocyte from the blood vessels into the surrounding tissue.
Synonyms:exact_synonym: immune cell cellular extravasation;   leucocyte cellular extravasation;   leukocyte cellular extravasation;   transendothelial leukocyte migration
 xref: Wikipedia:Leukocyte_extravasation



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cellular extravasation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itga1 integrin subunit alpha 1 acts_upstream_of_or_within ISO MGI:2661083 (MGI:2658799|PMID:10528208) RGD PMID:10528208 MGI:2658799 NCBI chr 2:46,646,125...46,812,237
Ensembl chr 2:46,653,193...46,812,238
JBrowse link
G Itgam integrin subunit alpha M acts_upstream_of_or_within ISO MGI:2157556 (MGI:2658799|PMID:10528208) RGD PMID:10528208 MGI:2658799 NCBI chr 1:182,659,047...182,709,495
Ensembl chr 1:182,659,000...182,709,503
JBrowse link
G Itgb2 integrin subunit beta 2 acts_upstream_of_or_within IMP
ISO
MGI:1861705 (MGI:2658799|PMID:10528208) RGD PMID:10528208 PMID:10363598 MGI:2658799, RGD:1600231 NCBI chr20:11,061,394...11,097,656
Ensembl chr20:11,061,430...11,097,600
JBrowse link
G Jam2 junctional adhesion molecule 2 involved_in ISO (PMID:12239159)
(MGI:6316481|PMID:12239159)
RGD PMID:12239159 MGI:6316481 NCBI chr11:23,830,820...23,880,071
Ensembl chr11:23,831,106...23,880,063
JBrowse link
G Tnf tumor necrosis factor acts_upstream_of_or_within ISO (MGI:2658799|PMID:10528208) RGD PMID:10528208 MGI:2658799 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
JBrowse link
diapedesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd99l2 CD99 molecule-like 2 acts_upstream_of_or_within ISO (MGI:5467432|PMID:23293350) RGD PMID:23293350 MGI:5467432
G Fer FER tyrosine kinase involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5319615|PMID:16009680)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:16009680 GO_REF:0000024 GO_REF:0000107 MGI:5319615 NCBI chr 9:103,520,452...103,827,364
Ensembl chr 9:103,520,493...103,821,451
JBrowse link
G Itga4 integrin subunit alpha 4 IMP RGD PMID:8550078 RGD:9698438 NCBI chr 3:64,162,764...64,235,010
Ensembl chr 3:64,163,085...64,233,715
JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 involved_in ISO (PMID:19342684) RGD PMID:19342684 NCBI chr10:91,590,521...91,652,279
Ensembl chr10:91,590,521...91,652,116
JBrowse link
G Trim55 tripartite motif-containing 55 acts_upstream_of_or_within_positive_effect ISO MGI:3773035 (MGI:6193412|PMID:26452100) RGD PMID:26452100 MGI:6193412 NCBI chr 2:102,100,229...102,142,173
Ensembl chr 2:102,088,443...102,142,168
JBrowse link
helper T cell diapedesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crk CRK proto-oncogene, adaptor protein acts_upstream_of_or_within ISO MGI:104686 (MGI:5634599|PMID:25621495) RGD PMID:25621495 MGI:5634599 NCBI chr10:60,530,469...60,556,703
Ensembl chr10:60,530,464...60,553,406
JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein acts_upstream_of_or_within ISO MGI:88508 (MGI:5634599|PMID:25621495) RGD PMID:25621495 MGI:5634599 NCBI chr11:83,528,788...83,563,214
Ensembl chr11:83,526,530...83,563,238
JBrowse link
helper T cell extravasation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl2 C-C motif chemokine ligand 2 involved_in ISO (MGI:3812298|PMID:18586982) RGD PMID:18586982 MGI:3812298 NCBI chr10:67,005,424...67,007,222
Ensembl chr10:67,005,424...67,007,226
JBrowse link
leukocyte adhesive activation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cx3cl1 C-X3-C motif chemokine ligand 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:10,227,337...10,237,826
Ensembl chr19:10,227,340...10,236,833
JBrowse link
G Selplg selectin P ligand involved_in ISO (MGI:3718272|PMID:17632516) RGD PMID:17632516 MGI:3718272 NCBI chr12:42,796,690...42,809,908
Ensembl chr12:42,796,580...42,812,585
JBrowse link
leukocyte tethering or rolling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Add2 adducin 2 involved_in ISO
IEA
(PMID:25425738)
GO_REF:0000107
RGD
Ensembl
PMID:25425738 GO_REF:0000107 NCBI chr 4:118,444,594...118,538,505
Ensembl chr 4:118,497,416...118,538,505
JBrowse link
G Chst4 carbohydrate sulfotransferase 4 acts_upstream_of_or_within ISO MGI:2682796 (MGI:2679922|PMID:14597732) RGD PMID:14597732 MGI:2679922 NCBI chr19:37,993,471...38,002,123
Ensembl chr19:37,991,417...38,003,608
JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in ISO UniProtKB:O00585|UniProtKB:P19320 (MGI:6162594|PMID:10187784) RGD PMID:10187784 MGI:6162594 NCBI chr 8:119,785,726...119,799,431
Ensembl chr 8:119,782,595...119,800,014
JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (MGI:4866972|PMID:21093315) RGD PMID:21093315 MGI:4866972 NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
JBrowse link
G Gcnt1 glucosaminyl (N-acetyl) transferase 1 involved_in ISO (PMID:23027862) RGD PMID:23027862 NCBI chr 1:214,718,344...214,755,735
Ensembl chr 1:214,718,293...214,758,776
JBrowse link
G Golph3 golgi phosphoprotein 3 involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:23027862)
Ensembl
UniProt
RGD
PMID:23027862 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:61,348,030...61,376,051
Ensembl chr 2:61,348,030...61,376,049
JBrowse link
G Itga4 integrin subunit alpha 4 involved_in ISO (PMID:18308860) RGD PMID:18308860 NCBI chr 3:64,162,764...64,235,010
Ensembl chr 3:64,163,085...64,233,715
JBrowse link
G Itgb1 integrin subunit beta 1 involved_in ISO
IEA
(PMID:18308860)
GO_REF:0000107
RGD
Ensembl
PMID:18308860 GO_REF:0000107 NCBI chr19:56,705,123...56,753,199
Ensembl chr19:56,705,171...56,753,195
JBrowse link
G Itgb7 integrin subunit beta 7 involved_in ISO (PMID:18308860) RGD PMID:18308860 NCBI chr 7:133,347,927...133,364,955
Ensembl chr 7:133,347,960...133,364,876
JBrowse link
G Jam2 junctional adhesion molecule 2 involved_in ISO (PMID:19740376)
(MGI:6316549|PMID:19740376)
RGD PMID:19740376 MGI:6316549 NCBI chr11:23,830,820...23,880,071
Ensembl chr11:23,831,106...23,880,063
JBrowse link
G Lep leptin IDA RGD PMID:20150963 RGD:5128596 NCBI chr 4:57,661,127...57,675,262
Ensembl chr 4:57,661,131...57,675,262
JBrowse link
G Madcam1 mucosal vascular addressin cell adhesion molecule 1 involved_in ISO
IBA
(PMID:18308860)
PMID:21873635
RGD PMID:18308860 PMID:21873635 RGD:13792537 NCBI chr 7:10,036,301...10,039,703
Ensembl chr 7:10,036,301...10,039,703
JBrowse link
G Podxl2 podocalyxin-like 2 involved_in ISO
IBA
(PMID:18606703)
PMID:21873635
RGD PMID:18606703 PMID:21873635 RGD:13792537 NCBI chr 4:121,306,224...121,338,070
Ensembl chr 4:121,306,224...121,338,112
JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:12082081)
Ensembl
RGD
PMID:12082081 GO_REF:0000107 NCBI chr18:1,114,532...1,236,345
Ensembl chr18:1,115,905...1,235,571
JBrowse link
G Sele selectin E involved_in ISO
IBA
IEA
(PMID:18029551)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:18029551 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr13:76,402,841...76,412,741
Ensembl chr13:76,403,304...76,412,741
JBrowse link
G Sell selectin L involved_in ISO
IEA
ISS
(PMID:28011641)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:28011641 GO_REF:0000024 GO_REF:0000107 NCBI chr13:76,416,969...76,436,444
Ensembl chr13:76,416,915...76,436,456
JBrowse link
G Selp selectin P involved_in
acts_upstream_of_or_within
IEA
IBA
ISO
ISS
GO_REF:0000107
PMID:21873635
MGI:1857245 (MGI:3701917|PMID:15956287)
GO_REF:0000024
(PMID:28011641)
Ensembl
RGD
UniProt
PMID:15956287 PMID:28011641 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:3701917, RGD:13792537 NCBI chr13:76,476,229...76,511,846
Ensembl chr13:76,476,295...76,511,845
JBrowse link
G Selplg selectin P ligand involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:25425738)
MGI:2176571 (MGI:3701917|PMID:15956287)
PMID:21873635
RGD PMID:15956287 PMID:25425738 PMID:21873635 MGI:3701917, RGD:13792537 NCBI chr12:42,796,690...42,809,908
Ensembl chr12:42,796,580...42,812,585
JBrowse link
G Spn sialophorin involved_in ISS
ISO
GO_REF:0000024
(MGI:6114858|PMID:26700769)
UniProt
RGD
PMID:26700769 GO_REF:0000024 MGI:6114858 NCBI chr 1:181,746,937...181,759,564
Ensembl chr 1:181,746,429...181,759,628
JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:10820279) RGD PMID:10820279 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
JBrowse link
G Vcam1 vascular cell adhesion molecule 1 involved_in ISO (PMID:18308860), (PMID:2688898) RGD PMID:2688898 PMID:18308860 NCBI chr 2:204,038,120...204,057,852
Ensembl chr 2:204,038,114...204,057,958
JBrowse link
memory T cell extravasation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G F11r F11 receptor involved_in ISO (PMID:11812992) RGD PMID:11812992 NCBI chr13:83,873,797...83,897,388
Ensembl chr13:83,873,797...83,897,402
JBrowse link
G Itgal integrin subunit alpha L involved_in ISO (PMID:11812992) RGD PMID:11812992 NCBI chr 1:181,918,183...181,955,735
Ensembl chr 1:181,918,183...181,955,732
JBrowse link
monocyte extravasation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccr2 C-C motif chemokine receptor 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:6155533|PMID:29632244)
UniProt
RGD
PMID:29632244 GO_REF:0000024 MGI:6155533 NCBI chr 8:123,734,465...123,742,483
Ensembl chr 8:123,734,430...123,742,100
JBrowse link
G Jaml junction adhesion molecule like involved_in ISO
IBA
(PMID:18948633)
PMID:21873635
RGD PMID:18948633 PMID:21873635 RGD:13792537 NCBI chr 8:45,384,836...45,415,459
Ensembl chr 8:45,383,495...45,416,565
JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 involved_in ISO (PMID:11078691) RGD PMID:11078691 NCBI chr10:91,590,521...91,652,279
Ensembl chr10:91,590,521...91,652,116
JBrowse link
G Sirpa signal-regulatory protein alpha involved_in IMP PMID:12023387 ARUK-UCL PMID:12023387 RGD:625650 NCBI chr 3:116,819,730...116,858,099
Ensembl chr 3:116,819,726...116,858,098
JBrowse link
negative regulation of cellular extravasation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abr ABR activator of RhoGEF and GTPase involved_in ISO (MGI:5475443|PMID:23152932) RGD PMID:23152932 MGI:5475443 NCBI chr10:61,262,516...61,461,331
Ensembl chr10:61,262,516...61,461,505
JBrowse link
G Bcr BCR activator of RhoGEF and GTPase involved_in ISO (MGI:5475443|PMID:23152932) RGD PMID:23152932 MGI:5475443 NCBI chr20:13,471,679...13,596,497
Ensembl chr20:13,471,668...13,597,016
JBrowse link
G Il27ra interleukin 27 receptor subunit alpha involved_in ISO UniProtKB:P35951 (MGI:5581894|PMID:22927332) RGD PMID:22927332 MGI:5581894 NCBI chr19:24,109,698...24,121,977
Ensembl chr19:24,109,972...24,121,938
JBrowse link
negative regulation of eosinophil extravasation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptger4 prostaglandin E receptor 4 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:21681739)
UniProt
Ensembl
RGD
PMID:21681739 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:54,330,563...54,347,451
Ensembl chr 2:54,335,424...54,346,670
JBrowse link
negative regulation of leukocyte tethering or rolling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl21 C-C motif chemokine ligand 21 involved_in ISO (PMID:18308860) RGD PMID:18308860 NCBI chr 5:56,980,557...56,981,661
Ensembl chr 5:56,980,558...56,981,686
JBrowse link
G Ccl25 C-C motif chemokine ligand 25 involved_in ISO (PMID:18308860) RGD PMID:18308860 NCBI chr12:2,707,398...2,716,571
Ensembl chr12:2,707,398...2,716,554
JBrowse link
G Ccl28 C-C motif chemokine ligand 28 involved_in ISO (PMID:18308860) RGD PMID:18308860 NCBI chr 2:51,601,354...51,625,999
Ensembl chr 2:51,601,331...51,625,997
JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 involved_in ISO (PMID:18308860) RGD PMID:18308860 NCBI chr 4:150,388,326...150,401,173
Ensembl chr 4:150,388,325...150,401,168
JBrowse link
negative regulation of monocyte extravasation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plcb1 phospholipase C beta 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:4867163|PMID:19687358)
GO_REF:0000107
BHF-UCL
RGD
Ensembl
PMID:19687358 GO_REF:0000024 GO_REF:0000107 MGI:4867163 NCBI chr 3:122,059,968...122,772,896
Ensembl chr 3:122,060,031...122,772,869
JBrowse link
negative regulation of T cell extravasation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il27ra interleukin 27 receptor subunit alpha involved_in ISO UniProtKB:P35951 (MGI:5581894|PMID:22927332) RGD PMID:22927332 MGI:5581894 NCBI chr19:24,109,698...24,121,977
Ensembl chr19:24,109,972...24,121,938
JBrowse link
neutrophil extravasation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd177 CD177 molecule involved_in ISO (PMID:17580308), (PMID:22266279) RGD PMID:17580308 PMID:22266279 NCBI chr 1:80,340,034...80,360,599
Ensembl chr 1:80,340,034...80,360,621
JBrowse link
G Jaml junction adhesion molecule like involved_in ISO
IBA
(PMID:15800062)
PMID:21873635
RGD PMID:15800062 PMID:21873635 RGD:13792537 NCBI chr 8:45,384,836...45,415,459
Ensembl chr 8:45,383,495...45,416,565
JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 involved_in ISO (PMID:17580308), (PMID:22266279) RGD PMID:17580308 PMID:22266279 NCBI chr10:91,590,521...91,652,279
Ensembl chr10:91,590,521...91,652,116
JBrowse link
G Prtn3 proteinase 3 involved_in ISO (PMID:22266279) RGD PMID:22266279 NCBI chr 7:9,822,123...9,831,300
Ensembl chr 7:9,822,122...9,831,944
JBrowse link
G Trem1 triggering receptor expressed on myeloid cells 1 acts_upstream_of_or_within ISO MGI:1930003 (MGI:5471912|PMID:23241959) RGD PMID:23241959 MGI:5471912 NCBI chr 9:12,763,819...12,779,285
Ensembl chr 9:12,763,819...12,779,203
JBrowse link
G Trem3 triggering receptor expressed on myeloid cells 3 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 9:12,749,821...12,762,547
Ensembl chr 9:12,749,852...12,760,779
JBrowse link
positive regulation of CD8-positive, alpha-beta cytotoxic T cell extravasation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fadd Fas associated via death domain involved_in ISS
ISO
GO_REF:0000024
(MGI:5291865|PMID:21876153)
UniProt
RGD
PMID:21876153 GO_REF:0000024 MGI:5291865 NCBI chr 1:199,743,200...199,745,746
Ensembl chr 1:199,739,994...199,745,653
JBrowse link
positive regulation of CD8-positive, alpha-beta T cell extravasation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccr2 C-C motif chemokine receptor 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:3699670|PMID:14662900)
BHF-UCL
RGD
PMID:14662900 GO_REF:0000024 MGI:3699670 NCBI chr 8:123,734,465...123,742,483
Ensembl chr 8:123,734,430...123,742,100
JBrowse link
positive regulation of cellular extravasation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam8 ADAM metallopeptidase domain 8 involved_in IBA
ISO
PMID:21873635
(MGI:5009357|PMID:20194813)
RGD PMID:20194813 PMID:21873635 MGI:5009357, RGD:13792537 NCBI chr 1:194,776,559...194,789,330
Ensembl chr 1:194,770,060...194,788,801
JBrowse link
G Ccl2 C-C motif chemokine ligand 2 IDA RGD PMID:10225970 RGD:8549768 NCBI chr10:67,005,424...67,007,222
Ensembl chr10:67,005,424...67,007,226
JBrowse link
G Icam1 intercellular adhesion molecule 1 involved_in ISO (PMID:12902516) RGD PMID:12902516 NCBI chr 8:19,553,063...19,565,438
Ensembl chr 8:19,553,645...19,565,438
JBrowse link
G Jam3 junctional adhesion molecule 3 acts_upstream_of_or_within ISO (PMID:31926946) RGD PMID:31926946 NCBI chr 8:25,508,461...25,569,306
Ensembl chr 8:25,507,057...25,569,355
JBrowse link
G Lyve1 lymphatic vessel endothelial hyaluronan receptor 1 involved_in ISO (PMID:26823460) RGD PMID:26823460 NCBI chr 1:164,962,872...164,976,309
Ensembl chr 1:164,962,872...164,976,309
JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 IMP RGD PMID:10861081 RGD:11541092 NCBI chr10:91,590,521...91,652,279
Ensembl chr10:91,590,521...91,652,116
JBrowse link
G Plvap plasmalemma vesicle associated protein involved_in ISO
IBA
(PMID:19420356)
PMID:21873635
(MGI:3851669|PMID:19420356)
RGD PMID:19420356 PMID:21873635 MGI:3851669, RGD:13792537 NCBI chr16:18,184,985...18,197,301
Ensembl chr16:18,184,975...18,197,301
JBrowse link
G Ptafr platelet-activating factor receptor IMP RGD PMID:2829894 PMID:3011900 RGD:10041060, RGD:10043179 NCBI chr 5:144,765,770...144,795,057
Ensembl chr 5:144,765,976...144,795,251
JBrowse link
G Thy1 Thy-1 cell surface antigen involved_in ISO (PMID:15004192) RGD PMID:15004192 NCBI chr 8:44,389,495...44,394,688
Ensembl chr 8:44,389,513...44,394,659
JBrowse link
positive regulation of leukocyte tethering or rolling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Capn1 calpain 1 IMP RGD PMID:21415394 RGD:13792556 NCBI chr 1:203,275,912...203,300,848
Ensembl chr 1:203,277,344...203,300,177
JBrowse link
G Ccr2 C-C motif chemokine receptor 2 acts_upstream_of_or_within ISO MGI:2158345 (MGI:1100445|PMID:9342361) RGD PMID:9342361 MGI:1100445 NCBI chr 8:123,734,465...123,742,483
Ensembl chr 8:123,734,430...123,742,100
JBrowse link
G Chst2 carbohydrate sulfotransferase 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:3662819|PMID:16227985)
Ensembl
RGD
PMID:16227985 GO_REF:0000107 MGI:3662819 NCBI chr 8:95,960,067...95,965,803
Ensembl chr 8:95,959,826...95,966,955
JBrowse link
G Chst4 carbohydrate sulfotransferase 4 involved_in ISO (MGI:3662819|PMID:16227985) RGD PMID:16227985 MGI:3662819 NCBI chr19:37,993,471...38,002,123
Ensembl chr19:37,991,417...38,003,608
JBrowse link
G Elane elastase, neutrophil expressed IMP RGD PMID:20860667 RGD:10450565 NCBI chr 7:9,817,251...9,819,174
Ensembl chr 7:9,817,252...9,819,100
JBrowse link
G Fut4 fucosyltransferase 4 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:1860416|PMID:10894166), (MGI:2387990|PMID:11485743)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:10894166 PMID:11485743 GO_REF:0000024 GO_REF:0000107 MGI:1860416 MGI:2387990 NCBI chr 8:11,586,721...11,590,682
Ensembl chr 8:11,586,721...11,590,682
JBrowse link
G Fut7 fucosyltransferase 7 involved_in ISS
ISO
GO_REF:0000024
(MGI:1860416|PMID:10894166), (MGI:2387990|PMID:11485743), (MGI:3578437|PMID:15843584)
UniProt
RGD
PMID:10894166 PMID:11485743 PMID:15843584 GO_REF:0000024 MGI:1860416 MGI:2387990 MGI:3578437 NCBI chr 3:8,237,687...8,242,273
Ensembl chr 3:8,239,384...8,242,260
JBrowse link
G Itga4 integrin subunit alpha 4 IMP RGD PMID:9394821 RGD:9698423 NCBI chr 3:64,162,764...64,235,010
Ensembl chr 3:64,163,085...64,233,715
JBrowse link
G Pawr pro-apoptotic WT1 regulator IDA RGD PMID:12133973 RGD:9835372 NCBI chr 7:43,645,028...43,725,033
Ensembl chr 7:43,645,084...43,725,028
JBrowse link
G Ptafr platelet-activating factor receptor IMP RGD PMID:10528212 RGD:10041051 NCBI chr 5:144,765,770...144,795,057
Ensembl chr 5:144,765,976...144,795,251
JBrowse link
G Sele selectin E involved_in ISS
ISO
GO_REF:0000024
(MGI:1860416|PMID:10894166)
UniProt
RGD
PMID:10894166 GO_REF:0000024 MGI:1860416 NCBI chr13:76,402,841...76,412,741
Ensembl chr13:76,403,304...76,412,741
JBrowse link
G Selp selectin P involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:1860416|PMID:10894166)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:10894166 GO_REF:0000024 GO_REF:0000107 MGI:1860416 NCBI chr13:76,476,229...76,511,846
Ensembl chr13:76,476,295...76,511,845
JBrowse link
G St3gal4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 involved_in ISO
ISS
(PMID:25498912)
(MGI:6467688|PMID:25498912)
GO_REF:0000024
RGD
UniProt
PMID:25498912 GO_REF:0000024 MGI:6467688 NCBI chr 8:33,415,666...33,465,365
Ensembl chr 8:33,415,671...33,524,389
JBrowse link
positive regulation of monocyte extravasation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end product-specific receptor involved_in ISO
IEA
(PMID:11078691)
GO_REF:0000107
RGD
Ensembl
PMID:11078691 GO_REF:0000107 NCBI chr20:4,148,150...4,151,361
Ensembl chr20:4,147,890...4,151,078
JBrowse link
G Ccr2 C-C motif chemokine receptor 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:3840068|PMID:14566334)
BHF-UCL
RGD
PMID:14566334 GO_REF:0000024 MGI:3840068 NCBI chr 8:123,734,465...123,742,483
Ensembl chr 8:123,734,430...123,742,100
JBrowse link
G Cd47 Cd47 molecule involved_in IMP PMID:12023387 ARUK-UCL PMID:12023387 RGD:625650 NCBI chr11:50,906,052...50,970,000
Ensembl chr11:50,906,177...50,969,425
JBrowse link
G Pdgfd platelet derived growth factor D IMP RGD PMID:12937299 RGD:9854637 NCBI chr 8:3,488,448...3,722,395
Ensembl chr 8:3,488,423...3,722,395
JBrowse link
positive regulation of neutrophil extravasation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam8 ADAM metallopeptidase domain 8 involved_in ISO (PMID:17548643) RGD PMID:17548643 NCBI chr 1:194,776,559...194,789,330
Ensembl chr 1:194,770,060...194,788,801
JBrowse link
G Cd99 CD99 molecule (Xg blood group) involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3834537|PMID:17344467)
RGD PMID:17344467 PMID:21873635 MGI:3834537, RGD:13792537 NCBI chr20:54,418,239...54,422,882 JBrowse link
G Cd99l2 CD99 molecule-like 2 acts_upstream_of_or_within ISO (MGI:3834537|PMID:17344467), (MGI:5467432|PMID:23293350) RGD PMID:17344467 PMID:23293350 MGI:3834537 MGI:5467432
G Il1a interleukin 1 alpha acts_upstream_of_or_within ISO (MGI:5468848|PMID:23395675) RGD PMID:23395675 MGI:5468848 NCBI chr 3:116,526,601...116,537,055
Ensembl chr 3:116,526,604...116,536,822
JBrowse link
G Il1r1 interleukin 1 receptor type 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:5468848|PMID:23395675)
Ensembl
RGD
PMID:23395675 GO_REF:0000107 MGI:5468848 NCBI chr 9:42,504,917...42,580,958
Ensembl chr 9:42,504,735...42,579,937
JBrowse link
G Mdk midkine involved_in ISS
ISO
GO_REF:0000024
(MGI:5568278|PMID:24458438)
UniProt
RGD
PMID:24458438 GO_REF:0000024 MGI:5568278 NCBI chr 3:77,901,156...77,903,997
Ensembl chr 3:77,901,158...77,903,130
JBrowse link
G Pawr pro-apoptotic WT1 regulator IDA RGD PMID:12133973 RGD:9835372 NCBI chr 7:43,645,028...43,725,033
Ensembl chr 7:43,645,084...43,725,028
JBrowse link
G Ptger3 prostaglandin E receptor 3 IMP RGD PMID:15944932 RGD:10003098 NCBI chr 2:246,606,131...246,750,970
Ensembl chr 2:246,606,183...246,684,434
JBrowse link
G Ptger4 prostaglandin E receptor 4 IMP RGD PMID:15944932 RGD:10003098 NCBI chr 2:54,330,563...54,347,451
Ensembl chr 2:54,335,424...54,346,670
JBrowse link
G Ripor2 RHO family interacting cell polarization regulator 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5887189|PMID:25588844)
UniProt
RGD
PMID:25588844 GO_REF:0000024 MGI:5887189 NCBI chr17:40,323,867...40,547,482
Ensembl chr17:40,323,867...40,548,092
JBrowse link
positive regulation of T cell extravasation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd99l2 CD99 molecule-like 2 acts_upstream_of_or_within ISO (MGI:5467432|PMID:23293350) RGD PMID:23293350 MGI:5467432
G Med23 mediator complex subunit 23 acts_upstream_of_or_within ISO MGI:3526093|MGI:5568337 (MGI:5615958|PMID:25054639) RGD PMID:25054639 MGI:5615958 NCBI chr 1:20,490,315...20,558,461
Ensembl chr 1:20,490,315...20,537,463
JBrowse link
regulation of CD8-positive, alpha-beta cytotoxic T cell extravasation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ripk3 receptor-interacting serine-threonine kinase 3 involved_in ISS
ISO
GO_REF:0000024
UniProtKB:Q61160 (MGI:5291865|PMID:21876153)
UniProt
RGD
PMID:21876153 GO_REF:0000024 MGI:5291865 NCBI chr15:29,283,153...29,292,107
Ensembl chr15:29,283,145...29,292,121
JBrowse link
regulation of cellular extravasation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Selp selectin P IMP RGD PMID:12081568 RGD:1566567 NCBI chr13:76,476,229...76,511,846
Ensembl chr13:76,476,295...76,511,845
JBrowse link
regulation of leukocyte tethering or rolling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fut7 fucosyltransferase 7 involved_in ISO (PMID:23192350) RGD PMID:23192350 NCBI chr 3:8,237,687...8,242,273
Ensembl chr 3:8,239,384...8,242,260
JBrowse link
G Fut9 fucosyltransferase 9 involved_in ISO
ISS
(PMID:23192350)
GO_REF:0000024
RGD
UniProt
PMID:23192350 GO_REF:0000024 NCBI chr 5:39,351,815...39,565,256
Ensembl chr 5:39,351,819...39,565,130
JBrowse link
regulation of neutrophil extravasation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fut7 fucosyltransferase 7 involved_in ISO (MGI:82475|PMID:8752218) RGD PMID:8752218 MGI:82475 NCBI chr 3:8,237,687...8,242,273
Ensembl chr 3:8,239,384...8,242,260
JBrowse link
G Olfm4 olfactomedin 4 NOT|involved_in ISO (PMID:23922742) RGD PMID:23922742 NCBI chr15:55,385,100...55,429,687
Ensembl chr15:55,407,148...55,429,681
JBrowse link
T cell extravasation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd99 CD99 molecule (Xg blood group) involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3834537|PMID:17344467)
RGD PMID:17344467 PMID:21873635 MGI:3834537, RGD:13792537 NCBI chr20:54,418,239...54,422,882 JBrowse link
G Icam1 intercellular adhesion molecule 1 acts_upstream_of_or_within ISO (MGI:3834537|PMID:17344467) RGD PMID:17344467 MGI:3834537 NCBI chr 8:19,553,063...19,565,438
Ensembl chr 8:19,553,645...19,565,438
JBrowse link
T-helper 1 cell diapedesis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl5 C-C motif chemokine ligand 5 involved_in IDA PMID:10477596 BHF-UCL PMID:10477596 RGD:8553666 NCBI chr10:68,322,826...68,327,365
Ensembl chr10:68,322,829...68,327,377
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19497
    immune system process 2829
      leukocyte migration 393
        cellular extravasation 79
          T cell extravasation + 14
          diapedesis + 8
          eosinophil extravasation + 1
          leukocyte activation-dependent arrest 0
          leukocyte adhesive activation 2
          leukocyte tethering or rolling + 35
          monocyte extravasation + 8
          negative regulation of cellular extravasation + 9
          neutrophil extravasation + 18
          positive regulation of cellular extravasation + 24
          regulation of cellular extravasation + 45
Path 2
Term Annotations click to browse term
  biological_process 19497
    cellular process 18359
      localization of cell 1792
        cell motility 1792
          cell migration 1591
            leukocyte migration 393
              cellular extravasation 79
                T cell extravasation + 14
                diapedesis + 8
                eosinophil extravasation + 1
                leukocyte activation-dependent arrest 0
                leukocyte adhesive activation 2
                leukocyte tethering or rolling + 35
                monocyte extravasation + 8
                negative regulation of cellular extravasation + 9
                neutrophil extravasation + 18
                positive regulation of cellular extravasation + 24
                regulation of cellular extravasation + 45
paths to the root