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ONTOLOGY REPORT - ANNOTATIONS


Term:integrin biosynthetic process
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Accession:GO:0045112 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of integrins, a large family of transmembrane proteins that act as receptors for cell-adhesion molecules.
Synonyms:exact_synonym: integrin anabolism;   integrin biosynthesis;   integrin formation;   integrin synthesis



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integrin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col5a1 collagen type V alpha 1 chain involved_in ISO
IEA
(PMID:18305566)
GO_REF:0000107
RGD
Ensembl
PMID:18305566 GO_REF:0000107 NCBI chr 3:11,208,429...11,356,715
Ensembl chr 3:11,208,512...11,354,588
JBrowse link
negative regulation of integrin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:21310825)
Ensembl
UniProt
RGD
PMID:21310825 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:63,104,771...63,273,934
Ensembl chr  X:63,104,771...63,273,925
JBrowse link
G Tmeff2 transmembrane protein with EGF-like and two follistatin-like domains 2 acts_upstream_of_or_within ISO (PMID:24632071) RGD PMID:24632071 NCBI chr 9:50,445,550...50,733,482
Ensembl chr 9:50,436,079...50,733,475
JBrowse link
positive regulation of integrin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor involved_in ISO
IEA
(PMID:21310825)
GO_REF:0000107
RGD
Ensembl
PMID:21310825 GO_REF:0000107 NCBI chr  X:63,104,771...63,273,934
Ensembl chr  X:63,104,771...63,273,925
JBrowse link
G Nox1 NADPH oxidase 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:18023288)
Ensembl
RGD
PMID:18023288 GO_REF:0000107 NCBI chr  X:97,279,058...97,332,291
Ensembl chr  X:97,279,056...97,302,236
JBrowse link
G Tgfb2 transforming growth factor, beta 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:17960115)
AgBase
RGD
PMID:17960115 GO_REF:0000024 NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
JBrowse link
regulation of integrin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G S100a7l2 S100 calcium binding protein A7 like 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:176,506,300...176,509,196
Ensembl chr 2:176,506,300...176,509,196
JBrowse link
G S100a9 S100 calcium binding protein A9 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:2450165 (MGI:2449751|PMID:12529407)
RGD PMID:12529407 PMID:21873635 MGI:2449751, RGD:13792537 NCBI chr 2:176,190,361...176,193,182
Ensembl chr 2:176,190,361...176,193,230
JBrowse link
G S100vp S100 calcium-binding protein, ventral prostate involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:176,748,273...176,751,624
Ensembl chr 2:176,748,273...176,751,624
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18872
    metabolic process 11588
      organic substance metabolic process 11147
        macromolecule metabolic process 9583
          macromolecule biosynthetic process 4820
            integrin biosynthetic process 8
              beta 2 integrin biosynthetic process + 0
              negative regulation of integrin biosynthetic process + 2
              positive regulation of integrin biosynthetic process + 3
              regulation of integrin biosynthetic process + 7
Path 2
Term Annotations click to browse term
  biological_process 18872
    cellular process 17581
      cellular component organization or biogenesis 6570
        cellular component organization 6338
          membrane organization 814
            plasma membrane organization 165
              integrin biosynthetic process 8
                beta 2 integrin biosynthetic process + 0
                negative regulation of integrin biosynthetic process + 2
                positive regulation of integrin biosynthetic process + 3
                regulation of integrin biosynthetic process + 7
paths to the root