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ONTOLOGY REPORT - ANNOTATIONS


Term:intermediate filament bundle assembly
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Accession:GO:0045110 term browser browse the term
Definition:The formation of the bundles of intermediate filaments. Intermediate filament-associated proteins (IFAPs) cross-link intermediate filaments with one another, forming a bundle or a network, and with other cell structures, including the plasma membrane. The organization of intermediate filaments and their supportive function in various cells types depends in large part on their linkage to other cell structures via IFAPs.
Synonyms:narrow_synonym: tonofilament assembly



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intermediate filament bundle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bbln bublin coiled coil protein involved_in ISO (PMID:33857431) RGD PMID:33857431 NCBI chr 3:15,674,577...15,677,322
Ensembl chr 3:15,674,580...15,677,374
JBrowse link
G Dst dystonin involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 9:36,135,657...36,529,617
Ensembl chr 9:36,135,284...36,529,615
JBrowse link
G Eppk1 epiplakin 1 involved_in ISO (MGI:5816446|PMID:20926261) RGD PMID:20926261 MGI:5816446 NCBI chr 7:107,816,919...107,842,946
Ensembl chr 7:107,817,693...107,831,159
JBrowse link
G Krt14 keratin 14 involved_in ISS
ISO
GO_REF:0000024
(PMID:11724817)
UniProt
RGD
PMID:11724817 GO_REF:0000024 NCBI chr10:85,137,786...85,142,054
Ensembl chr10:85,066,802...85,171,799
JBrowse link
G Macf1 microtubule-actin crosslinking factor 1 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 5:135,623,734...135,949,097
Ensembl chr 5:135,623,742...135,945,905
JBrowse link
G Nefh neurofilament heavy chain involved_in
acts_upstream_of_or_within
IGI
ISO
IEA
IBA
PMID:11034913
MGI:97313|MGI:97314 (MGI:1342909|PMID:10461886)
GO_REF:0000118
GO_REF:0000033
RGD
TreeGrafter
GO_Central
PMID:10461886 PMID:11034913 GO_REF:0000033 GO_REF:0000118 MGI:1342909, RGD:8554743 NCBI chr14:79,830,362...79,840,347
Ensembl chr14:79,830,362...79,840,351
JBrowse link
G Nefl neurofilament light chain acts_upstream_of_or_within
involved_in
ISO MGI:97309|MGI:97314 (MGI:1342909|PMID:10461886)
UniProtKB:P16884 (MGI:5553249|PMID:11034913)
RGD PMID:10461886 PMID:11034913 MGI:1342909 MGI:5553249 NCBI chr15:42,301,920...42,305,793
Ensembl chr15:42,301,916...42,305,793
JBrowse link
G Nefm neurofilament medium chain acts_upstream_of_or_within ISO MGI:97309|MGI:97313 (MGI:1342909|PMID:10461886) RGD PMID:10461886 MGI:1342909 NCBI chr15:42,360,449...42,365,753
Ensembl chr15:42,360,454...42,365,755
JBrowse link
G Pkp1 plakophilin 1 involved_in ISO (PMID:10852826) RGD PMID:10852826 NCBI chr13:47,309,607...47,357,432
Ensembl chr13:47,309,614...47,357,465
JBrowse link
G Pkp2 plakophilin 2 involved_in ISO
IBA
(PMID:18474624)
GO_REF:0000033
RGD
GO_Central
PMID:18474624 GO_REF:0000033 NCBI chr11:84,661,783...84,727,730
Ensembl chr11:84,661,783...84,727,730
JBrowse link
neurofilament bundle assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nefh neurofilament heavy chain involved_in ISO (PMID:7536898) RGD PMID:7536898 NCBI chr14:79,830,362...79,840,347
Ensembl chr14:79,830,362...79,840,351
JBrowse link
G Nefl neurofilament light chain involved_in IDA
IBA
ISO
GO_REF:0000033
(PMID:12432080), (PMID:15857389)
GO_Central
RGD
PMID:12432080 PMID:15857389 PMID:7721944 GO_REF:0000033, RGD:9743935 NCBI chr15:42,301,920...42,305,793
Ensembl chr15:42,301,916...42,305,793
JBrowse link
G Nefm neurofilament medium chain involved_in IDA
IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
RGD
PMID:7721944 GO_REF:0000033 GO_REF:0000118, RGD:9743935 NCBI chr15:42,360,449...42,365,753
Ensembl chr15:42,360,454...42,365,755
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20350
    cellular process 18813
      cellular component organization or biogenesis 7188
        cellular component organization 6877
          cellular component assembly 3163
            intermediate filament bundle assembly 10
              neurofilament bundle assembly 3
Path 2
Term Annotations click to browse term
  biological_process 20350
    cellular process 18813
      cellular component organization or biogenesis 7188
        cellular component organization 6877
          organelle organization 3818
            cytoskeleton organization 1628
              intermediate filament cytoskeleton organization 107
                intermediate filament organization 85
                  intermediate filament bundle assembly 10
                    neurofilament bundle assembly 3
paths to the root