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ONTOLOGY REPORT - ANNOTATIONS


Term:positive regulation of viral genome replication
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Accession:GO:0045070 term browser browse the term
Definition:Any process that activates or increases the frequency, rate or extent of viral genome replication.
Synonyms:exact_synonym: up regulation of viral genome replication;   upregulation of viral genome replication
 narrow_synonym: activation of viral genome replication;   stimulation of viral genome replication


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positive regulation of viral genome replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAR adenosine deaminase RNA specific involved_in IDA
IMP
(PMID:19651874)
(PMID:18362360)
UniProt PMID:18362360 PMID:19651874 NCBI chr 1:154,582,057...154,627,997
Ensembl chr 1:154,581,695...154,628,013
JBrowse link
G ADARB1 adenosine deaminase RNA specific B1 involved_in IMP (PMID:21289159) UniProt PMID:21289159 NCBI chr21:45,074,578...45,226,563
Ensembl chr21:45,073,853...45,226,560
JBrowse link
G CCL5 C-C motif chemokine ligand 5 involved_in TAS (PMID:10488085) BHF-UCL PMID:10488085 NCBI chr17:35,871,491...35,880,360
Ensembl chr17:35,871,491...35,880,793
JBrowse link
G CD28 CD28 molecule involved_in NAS (PMID:7492435) UniProt PMID:7492435 NCBI chr 2:203,706,509...203,739,756
Ensembl chr 2:203,706,475...203,738,912
JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in IMP (PMID:23386060) UniProt PMID:23386060 NCBI chr 8:17,221,981...17,246,857
Ensembl chr 8:17,224,966...17,246,878
JBrowse link
G DDB1 damage specific DNA binding protein 1 involved_in IMP (PMID:23137809) AgBase PMID:23137809 NCBI chr11:61,299,451...61,333,105
Ensembl chr11:61,299,451...61,342,596
JBrowse link
G DDX3X DEAD-box helicase 3 X-linked involved_in IMP (PMID:20862261) AgBase PMID:20862261 NCBI chr  X:41,333,308...41,364,472
Ensembl chr  X:41,333,348...41,364,472
JBrowse link
G FKBP6 FKBP prolyl isomerase family member 6 (inactive) involved_in IMP (PMID:26567527) AgBase PMID:26567527 NCBI chr 7:73,328,154...73,358,625
Ensembl chr 7:73,328,161...73,358,637
JBrowse link
G HACD3 3-hydroxyacyl-CoA dehydratase 3 involved_in IMP (PMID:18160438) AgBase PMID:18160438 NCBI chr15:65,530,463...65,578,355
Ensembl chr15:65,530,418...65,578,349
JBrowse link
G IFIT1 interferon induced protein with tetratricopeptide repeats 1 involved_in IDA (PMID:19416887) BHF-UCL PMID:19416887 NCBI chr10:89,392,623...89,406,487
Ensembl chr10:89,392,546...89,406,487
JBrowse link
G LARP1 La ribonucleoprotein 1, translational regulator involved_in IMP (PMID:26735137) UniProt PMID:26735137 NCBI chr 5:154,682,979...154,817,605
Ensembl chr 5:154,712,843...154,817,605
JBrowse link
G NOTCH1 notch receptor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:136,494,433...136,546,048
Ensembl chr 9:136,494,433...136,546,048
JBrowse link
G NR5A2 nuclear receptor subfamily 5 group A member 2 involved_in IDA (PMID:19264593) BHF-UCL PMID:19264593 NCBI chr 1:200,027,710...200,177,415
Ensembl chr 1:200,027,614...200,177,420
JBrowse link
G PABPC1 poly(A) binding protein cytoplasmic 1 involved_in IMP (PMID:26735137) UniProt PMID:26735137 NCBI chr 8:100,702,916...100,722,088
Ensembl chr 8:100,685,816...100,722,809
JBrowse link
G PDE12 phosphodiesterase 12 involved_in IMP (PMID:15231837) UniProt PMID:15231837 NCBI chr 3:57,556,274...57,656,495
Ensembl chr 3:57,556,274...57,566,848
JBrowse link
G PKN2 protein kinase N2 involved_in IMP (PMID:15364941) AgBase PMID:15364941 NCBI chr 1:88,684,239...88,836,255
Ensembl chr 1:88,684,222...88,836,255
JBrowse link
G PPARA peroxisome proliferator activated receptor alpha acts_upstream_of_or_within IMP (PMID:22479552) ARUK-UCL PMID:22479552 NCBI chr22:46,150,526...46,243,756
Ensembl chr22:46,150,521...46,243,756
JBrowse link
G PPIA peptidylprolyl isomerase A involved_in IMP (PMID:19932913) UniProt PMID:19932913 NCBI chr 7:44,795,960...44,803,117
Ensembl chr 7:44,796,680...44,824,564
JBrowse link
G PPID peptidylprolyl isomerase D involved_in IMP (PMID:19932913) UniProt PMID:19932913 NCBI chr 4:158,709,127...158,723,396
Ensembl chr 4:158,709,127...158,723,396
JBrowse link
G PPIE peptidylprolyl isomerase E involved_in IMP (PMID:19932913) UniProt PMID:19932913 NCBI chr 1:39,738,845...39,765,698
Ensembl chr 1:39,692,182...39,763,914
JBrowse link
G PPIH peptidylprolyl isomerase H involved_in IMP (PMID:19932913) UniProt PMID:19932913 NCBI chr 1:42,657,770...42,681,654
Ensembl chr 1:42,658,335...42,676,758
JBrowse link
G RAD23A RAD23 homolog A, nucleotide excision repair protein involved_in IMP (PMID:20614012) UniProt PMID:20614012 NCBI chr19:12,945,846...12,953,642
Ensembl chr19:12,945,855...12,953,642
JBrowse link
G SRPK1 SRSF protein kinase 1 involved_in IDA (PMID:20498328) BHF-UCL PMID:20498328 NCBI chr 6:35,832,966...35,921,098
Ensembl chr 6:35,832,966...35,921,342
JBrowse link
G SRPK2 SRSF protein kinase 2 involved_in IDA (PMID:20498328) BHF-UCL PMID:20498328 NCBI chr 7:105,110,708...105,399,363
Ensembl chr 7:105,110,704...105,399,308
JBrowse link
G STAU1 staufen double-stranded RNA binding protein 1 involved_in IMP (PMID:23907398) AgBase PMID:23907398 NCBI chr20:49,113,339...49,219,295
Ensembl chr20:49,113,339...49,188,367
JBrowse link
G TARBP2 TARBP2 subunit of RISC loading complex involved_in IDA (PMID:11641396) UniProt PMID:11641396 NCBI chr12:53,500,923...53,506,431
Ensembl chr12:53,500,921...53,506,431
JBrowse link
G TMEM39A transmembrane protein 39A involved_in IDA (PMID:31849860) UniProt PMID:31849860 NCBI chr 3:119,428,949...119,463,632
Ensembl chr 3:119,428,949...119,468,830
JBrowse link
G TRIM38 tripartite motif containing 38 acts_upstream_of_or_within ISO (MGI:5441682|PMID:22539786) MGI PMID:22539786 MGI:5441682 NCBI chr 6:25,962,723...25,991,231
Ensembl chr 6:25,962,802...25,991,231
JBrowse link
G VAPB VAMP associated protein B and C involved_in IMP (PMID:16227268) UniProt PMID:16227268 NCBI chr20:58,389,211...58,451,101
Ensembl chr20:58,389,229...58,451,101
JBrowse link
positive regulation of single stranded viral RNA replication via double stranded DNA intermediate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TOP2A DNA topoisomerase II alpha involved_in IMP (PMID:16712776) UniProt PMID:16712776 NCBI chr17:40,388,525...40,417,902
Ensembl chr17:40,388,525...40,417,896
JBrowse link
G TOP2B DNA topoisomerase II beta involved_in IMP (PMID:16712776) UniProt PMID:16712776 NCBI chr 3:25,597,905...25,664,907
Ensembl chr 3:25,597,984...25,664,907
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 18537
    viral process 451
      positive regulation of viral process 71
        positive regulation of viral genome replication 31
          positive regulation of single stranded viral RNA replication via double stranded DNA intermediate 2
Path 2
Term Annotations click to browse term
  biological_process 18537
    biological regulation 13081
      regulation of biological process 12367
        regulation of viral process 184
          regulation of viral life cycle 163
            regulation of viral genome replication 92
              positive regulation of viral genome replication 31
                positive regulation of single stranded viral RNA replication via double stranded DNA intermediate 2
paths to the root