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ONTOLOGY REPORT - ANNOTATIONS


Term:transcytosis
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Accession:GO:0045056 term browser browse the term
Definition:The directed movement of endocytosed material through the cell and its exocytosis from the plasma membrane at the opposite side.
Synonyms:xref: Wikipedia:Transcytosis


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transcytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ager advanced glycosylation end product-specific receptor involved_in IEA
ISO
GO_REF:0000107
UniProtKB:P05067:PRO_0000000092|UniProtKB:P05067:PRO_0000000093 (MGI:5424311|PMID:22406537), (MGI:6271381|PMID:12808450)
Ensembl
RGD
PMID:12808450 PMID:22406537 GO_REF:0000107 MGI:5424311 MGI:6271381 NCBI chr20:4,148,150...4,151,361
Ensembl chr20:4,147,890...4,151,078
JBrowse link
G Fshr follicle stimulating hormone receptor IDA RGD PMID:15050368 RGD:1601257 NCBI chr 6:5,198,825...5,406,785
Ensembl chr 6:5,198,825...5,406,785
JBrowse link
G Gpihbp1 glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 involved_in ISO (MGI:4820887|PMID:20620994) RGD PMID:20620994 MGI:4820887 NCBI chr 7:107,285,584...107,288,702
Ensembl chr 7:107,285,654...107,288,702
JBrowse link
G Igf1r insulin-like growth factor 1 receptor involved_in ISO
IEA
(PMID:16306401)
GO_REF:0000107
RGD
Ensembl
PMID:16306401 GO_REF:0000107 NCBI chr 1:121,549,839...121,838,545
Ensembl chr 1:121,550,743...121,831,777
JBrowse link
G Ldlr low density lipoprotein receptor involved_in ISO (PMID:15140193) RGD PMID:15140193 NCBI chr 8:20,270,020...20,292,981
Ensembl chr 8:20,270,041...20,294,580
JBrowse link
G Lrp2 LDL receptor related protein 2 involved_in IMP PMID:16306401
PMID:16801528
RGD
ARUK-UCL
UniProt
PMID:14657389 PMID:16306401 PMID:16801528 RGD:1641837, RGD:14697713, RGD:13210565 NCBI chr 3:54,189,305...54,346,769
Ensembl chr 3:54,189,308...54,346,708
JBrowse link
G Mal2 mal, T-cell differentiation protein 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 7:85,900,453...85,933,433
Ensembl chr 7:85,900,453...85,933,429
JBrowse link
G Mfsd2a major facilitator superfamily domain containing 2A involved_in ISO (MGI:5571503|PMID:24828040) RGD PMID:24828040 MGI:5571503 NCBI chr 5:135,225,801...135,240,744
Ensembl chr 5:135,225,816...135,240,690
JBrowse link
G Ptafr platelet-activating factor receptor IMP RGD PMID:9664076 RGD:10041053 NCBI chr 5:144,765,770...144,795,057
Ensembl chr 5:144,765,976...144,795,251
JBrowse link
G Rab17 RAB17, member RAS oncogene family involved_in ISO (MGI:5486576|PMID:9490718) RGD PMID:9490718 MGI:5486576 NCBI chr 9:91,552,924...91,566,759
Ensembl chr 9:91,553,464...91,566,451
JBrowse link
G Scarb1 scavenger receptor class B, member 1 involved_in ISO (PMID:15140193) RGD PMID:15140193 NCBI chr12:31,296,143...31,362,649
Ensembl chr12:31,296,156...31,362,647
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase IDA RGD PMID:15007081 RGD:1581140 NCBI chr 3:146,091,969...146,139,492
Ensembl chr 3:146,091,841...146,139,476
JBrowse link
G Tg thyroglobulin IDA RGD PMID:12809172 RGD:1600143 NCBI chr 7:98,418,293...98,603,210
Ensembl chr 7:98,418,293...98,603,210
JBrowse link
G Uso1 USO1 vesicle transport factor involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:7831324 PMID:21873635 RGD:730003, RGD:13792537 NCBI chr14:15,866,638...15,932,185
Ensembl chr14:15,866,638...15,932,171
JBrowse link
G Vps35 VPS35 retromer complex component involved_in ISO (PMID:15247922) RGD PMID:15247922 NCBI chr19:21,765,771...21,801,620
Ensembl chr19:21,765,749...21,801,618
JBrowse link
amyloid-beta clearance by transcytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cltc clathrin heavy chain involved_in ISO
IEA
(PMID:26005850)
GO_REF:0000107
RGD
Ensembl
PMID:26005850 GO_REF:0000107 NCBI chr10:71,517,661...71,574,591
Ensembl chr10:71,517,663...71,573,737
JBrowse link
G Lrp1 LDL receptor related protein 1 involved_in ISO UniProtKB:Q13492 (PMID:26005850)
(MGI:5439721|PMID:20630619)
RGD PMID:20630619 PMID:26005850 MGI:5439721 NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
JBrowse link
G Lrpap1 LDL receptor related protein associated protein 1 involved_in ISO (PMID:26005850) RGD PMID:26005850 NCBI chr14:75,651,371...75,663,380
Ensembl chr14:75,651,376...75,665,414
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein involved_in IEA
ISO
GO_REF:0000107
UniProtKB:P05067:PRO_0000000092 (MGI:5637941|PMID:26005850)
UniProtKB:Q07954 (PMID:26005850)
Ensembl
RGD
PMID:26005850 GO_REF:0000107 MGI:5637941 NCBI chr 1:144,056,415...144,138,045
Ensembl chr 1:144,056,721...144,137,557
JBrowse link
G Rab11a RAB11a, member RAS oncogene family involved_in ISO UniProtKB:Q07954|UniProtKB:Q15907 (PMID:26005850) RGD PMID:26005850 NCBI chr 8:65,223,698...65,246,461
Ensembl chr 8:65,222,949...65,246,525
JBrowse link
G Rab11b RAB11B, member RAS oncogene family involved_in ISO UniProtKB:P62491|UniProtKB:Q07954 (PMID:26005850) RGD PMID:26005850 NCBI chr 7:14,521,448...14,534,589
Ensembl chr 7:14,521,368...14,534,593
JBrowse link
G Rab5a RAB5A, member RAS oncogene family involved_in ISO UniProtKB:Q07954 (PMID:26005850) RGD PMID:26005850 NCBI chr 9:6,483,906...6,512,877
Ensembl chr 9:6,484,469...6,512,873
JBrowse link
antigen transcytosis by M cells in mucosal-associated lymphoid tissue term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gp2 glycoprotein 2 acts_upstream_of_or_within ISO (MGI:4412300|PMID:19907495) RGD PMID:19907495 MGI:4412300 NCBI chr 1:173,797,057...173,812,619
Ensembl chr 1:173,797,057...173,812,619
JBrowse link
immunoglobulin transcytosis in epithelial cells term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd300lg Cd300 molecule-like family member G acts_upstream_of_or_within ISO (MGI:3655196|PMID:16876123) RGD PMID:16876123 MGI:3655196 NCBI chr10:86,991,886...87,009,248
Ensembl chr10:86,991,921...87,008,733
JBrowse link
immunoglobulin transcytosis in epithelial cells mediated by polymeric immunoglobulin receptor term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pigr polymeric immunoglobulin receptor involved_in IEA
ISS
ISO
IBA
GO_REF:0000107
GO_REF:0000024
(PMID:10229845), (PMID:22022593), (PMID:9379029)
PMID:21873635
Ensembl
UniProt
RGD
PMID:9379029 PMID:10229845 PMID:22022593 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr13:42,298,905...42,326,877
Ensembl chr13:42,298,914...42,326,875
JBrowse link
G Rab17 RAB17, member RAS oncogene family involved_in ISO (MGI:1266871|PMID:9624171) RGD PMID:9624171 MGI:1266871 NCBI chr 9:91,552,924...91,566,759
Ensembl chr 9:91,553,464...91,566,451
JBrowse link
positive regulation of transcytosis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrp1 LDL receptor related protein 1 involved_in ISO (MGI:5754651|PMID:26619118) RGD PMID:26619118 MGI:5754651 NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
JBrowse link
G Ptafr platelet-activating factor receptor IMP RGD PMID:9664076 RGD:10041053 NCBI chr 5:144,765,770...144,795,057
Ensembl chr 5:144,765,976...144,795,251
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    cellular process 18340
      vesicle-mediated transport 1672
        transcytosis 25
          amyloid-beta clearance by transcytosis 7
          antigen transcytosis by M cells in mucosal-associated lymphoid tissue 1
          immunoglobulin transcytosis in epithelial cells + 3
          negative regulation of transcytosis 0
          positive regulation of transcytosis 2
          regulation of transcytosis + 2
Path 2
Term Annotations click to browse term
  biological_process 19492
    localization 6447
      establishment of localization 4864
        transport 4700
          vesicle-mediated transport 1672
            transcytosis 25
              amyloid-beta clearance by transcytosis 7
              antigen transcytosis by M cells in mucosal-associated lymphoid tissue 1
              immunoglobulin transcytosis in epithelial cells + 3
              negative regulation of transcytosis 0
              positive regulation of transcytosis 2
              regulation of transcytosis + 2
paths to the root