Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:plasma membrane raft organization
go back to main search page
Accession:GO:0044857 term browser browse the term
Definition:A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of plasma membrane rafts.


show annotations for term's descendants           Sort by:
plasma membrane raft organization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA7 ATP binding cassette subfamily A member 7 involved_in ISO (MGI:6274964|PMID:28091533) UniProt PMID:28091533 MGI:6274964 NCBI chr 2:77,357,161...77,375,349
Ensembl chr 2:77,357,218...77,375,180 		JBrowse link
G CLN3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:18,433,564...18,450,296
Ensembl chr 3:18,433,836...18,450,290 		JBrowse link
G COLEC12 collectin subfamily member 12 acts_upstream_of_positive_effect
involved_in		 ISO
IEA		 (PMID:25204797) GO_Central
Ensembl		 PMID:25204797 GO_REF:0000107 NCBI chr 6:105,808,157...106,000,197
Ensembl chr 6:105,808,221...106,007,730 		JBrowse link
G FA2H fatty acid 2-hydroxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:12,855,330...12,910,821
Ensembl chr 6:12,855,421...12,910,818 		JBrowse link
G FLOT1 flotillin 1 acts_upstream_of_positive_effect
involved_in		 ISO
IEA		 (PMID:25204797) GO_Central
Ensembl		 PMID:25204797 GO_REF:0000107 NCBI chr 7:23,253,157...23,265,165
Ensembl chr 7:23,253,162...23,265,106 		JBrowse link
caveola assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAV1 caveolin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 (PMID:12759260)
(PMID:11884617)		 Ensembl
MGI
GO_Central
TreeGrafter
InterPro		 PMID:11884617 PMID:12759260 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr18:29,648,120...29,682,451
Ensembl chr18:29,649,992...29,682,465 		JBrowse link
G CAV2 caveolin 2 involved_in ISS
IEA
IBA		 (PMID:12633858) UniProt
TreeGrafter
GO_Central
InterPro		 PMID:12633858 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr18:29,699,012...29,707,277
Ensembl chr18:29,699,020...29,707,277 		JBrowse link
G CAV3 caveolin 3 acts_upstream_of_or_within
involved_in		 ISO
IEA
IBA		 (PMID:18936328)
(PMID:18054955)		 MGI
TreeGrafter
GO_Central
InterPro		 PMID:18054955 PMID:18936328 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr13:65,117,868...65,130,886
Ensembl chr13:65,117,795...65,131,273 		JBrowse link
G EMP2 epithelial membrane protein 2 NOT|involved_in ISO (MGI:3047005|PMID:14978215) UniProt PMID:14978215 MGI:3047005 NCBI chr 3:32,449,496...32,493,245
Ensembl chr 3:32,450,604...32,492,721 		JBrowse link
G LOC100623720 collagen alpha-1(VI) chain acts_upstream_of_or_within ISO (PMID:19114551) MGI PMID:19114551 NCBI chr13:208,295,245...208,321,789
Ensembl chr13:208,295,451...208,313,127 		JBrowse link
G PACSIN2 protein kinase C and casein kinase substrate in neurons 2 involved_in IEA Ensembl
InterPro		 GO_REF:0000002 GO_REF:0000107 NCBI chr 5:5,853,377...5,985,174
Ensembl chr 5:5,853,377...5,985,169 		JBrowse link
plasma membrane raft assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EMP2 epithelial membrane protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:32,449,496...32,493,245
Ensembl chr 3:32,450,604...32,492,721 		JBrowse link
G FLOT1 flotillin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:23,253,157...23,265,165
Ensembl chr 7:23,253,162...23,265,106 		JBrowse link
G MIR138 microRNA mir-138 involved_in ISO (PMID:23319823) ARUK-UCL PMID:23319823 NCBI chr13:27,450,130...27,450,214
Ensembl chr13:27,450,130...27,450,214 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17813
    cellular process 16883
      cellular component organization or biogenesis 6721
        cellular component organization 6506
          endomembrane system organization 572
            plasma membrane organization 172
              plasma membrane raft organization 12
                plasma membrane raft assembly + 8
paths to the root