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ONTOLOGY REPORT - ANNOTATIONS


Term:cell cycle DNA replication
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Accession:GO:0044786 term browser browse the term
Definition:The DNA-dependent DNA replication that takes place as part of the cell cycle.


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DNA endoreduplication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zpr1 ZPR1 zinc finger involved_in ISO (MGI:3575865|PMID:15767679) UniProt PMID:15767679 MGI:3575865 NCBI chrNW_004936542:2,058,048...2,067,468 JBrowse link
DNA replication preinitiation complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdt1 chromatin licensing and DNA replication factor 1 involved_in ISO (PMID:11125146) CAFA PMID:11125146 NCBI chrNW_004936641:916,695...925,411 JBrowse link
G Gmnn geminin DNA replication inhibitor involved_in ISO (PMID:11125146) CAFA PMID:11125146 NCBI chrNW_004936671:1,017,621...1,027,224 JBrowse link
mitotic recombination-dependent replication fork processing term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brca2 BRCA2 DNA repair associated involved_in ISO (PMID:21076401) BHF-UCL PMID:21076401 NCBI chrNW_004936472:26,945,659...27,017,693 JBrowse link
mitotic telomere maintenance via semi-conservative replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dna2 DNA replication helicase/nuclease 2 involved_in ISO (MGI:5499273|PMID:23604072) BHF-UCL PMID:23604072 MGI:5499273 NCBI chrNW_004936521:9,843,867...9,884,248 JBrowse link
G Pcna proliferating cell nuclear antigen involved_in ISO (MGI:5522574|PMID:24115439) BHF-UCL PMID:24115439 MGI:5522574 NCBI chrNW_004936485:13,766,221...13,771,215 JBrowse link
G Rtel1 regulator of telomere elongation helicase 1 involved_in ISO (MGI:5522574|PMID:24115439) BHF-UCL PMID:24115439 MGI:5522574 NCBI chrNW_004936514:10,920,979...10,954,483 JBrowse link
negative regulation of DNA endoreduplication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxo5 F-box protein 5 involved_in ISO (PMID:17875940) UniProt PMID:17875940 NCBI chrNW_004936489:5,589,621...5,602,221 JBrowse link
nuclear DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atad5 ATPase family AAA domain containing 5 involved_in ISO (MGI:5763555|PMID:25404367) MGI PMID:25404367 MGI:5763555 NCBI chrNW_004936538:2,815,370...2,877,084 JBrowse link
G Znf830 zinc finger protein 830 acts_upstream_of_or_within ISO (MGI:4950701|PMID:21191184) MGI PMID:21191184 MGI:4950701 NCBI chrNW_004936538:243,557...245,353 JBrowse link
positive regulation of DNA endoreduplication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G E2f7 E2F transcription factor 7 involved_in ISO (MGI:5449497|PMID:23064266) UniProt PMID:23064266 MGI:5449497 NCBI chrNW_004936568:5,206,135...5,245,324 JBrowse link
G E2f8 E2F transcription factor 8 involved_in ISO (MGI:5449497|PMID:23064266), (MGI:5449498|PMID:23064264) UniProt PMID:23064264 PMID:23064266 MGI:5449497 MGI:5449498 NCBI chrNW_004936654:322,863...339,365 JBrowse link
positive regulation of mitotic cell cycle DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgfr1 fibroblast growth factor receptor 1 acts_upstream_of_or_within ISO (MGI:79015|PMID:2161540) MGI PMID:2161540 MGI:79015 NCBI chrNW_004936710:1,760,365...1,815,269 JBrowse link
positive regulation of nuclear cell cycle DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atrx ATRX chromatin remodeler involved_in ISO (MGI:5568153|PMID:24651726) UniProt PMID:24651726 MGI:5568153 NCBI chrNW_004936683:2,496,307...2,718,539 JBrowse link
G Cdc7 cell division cycle 7 involved_in ISO (PMID:15668232) UniProt PMID:15668232 NCBI chrNW_004936537:7,445,882...7,515,196 JBrowse link
G Dbf4b DBF4 zinc finger B involved_in ISO (PMID:15668232) UniProt PMID:15668232 NCBI chrNW_004936541:1,108,577...1,133,203 JBrowse link
G Ino80 INO80 complex ATPase subunit involved_in ISO (PMID:20237820) UniProt PMID:20237820 NCBI chrNW_004936471:4,374,802...4,478,894 JBrowse link
G Wiz WIZ zinc finger involved_in ISO (PMID:23545495) UniProt PMID:23545495 NCBI chrNW_004936596:5,061,674...5,084,931 JBrowse link
regulation of DNA endoreduplication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Senp2 SUMO specific peptidase 2 acts_upstream_of_or_within ISO (MGI:3831588|PMID:19090619) MGI PMID:19090619 MGI:3831588 NCBI chrNW_004936578:4,252,718...4,290,452 JBrowse link
regulation of mitotic cell cycle DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO (MGI:3583382|PMID:15980864) MGI PMID:15980864 MGI:3583382 NCBI chrNW_004936474:22,035,059...22,077,846 JBrowse link
regulation of nuclear cell cycle DNA replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aicda activation induced cytidine deaminase involved_in ISO (PMID:19734146) UniProt PMID:19734146 NCBI chrNW_004936870:25,039...34,601 JBrowse link
G Cdt1 chromatin licensing and DNA replication factor 1 acts_upstream_of_or_within ISO (MGI:2159541|PMID:11850834) MGI PMID:11850834 MGI:2159541 NCBI chrNW_004936641:916,695...925,411 JBrowse link
G Dach1 dachshund family transcription factor 1 involved_in ISO (MGI:5619482|PMID:16980615) CACAO PMID:16980615 MGI:5619482 NCBI chrNW_004936511:8,899,245...9,253,024 JBrowse link
G LOC101967857 ILK associated serine/threonine phosphatase ISO RGD PMID:9857069 RGD:632254 NCBI chrNW_004936525:303,436...322,677 JBrowse link
G Nuggc nuclear GTPase, germinal center associated involved_in ISO (PMID:19734146) UniProt PMID:19734146 NCBI chrNW_004936675:885,015...931,657 JBrowse link
telomere maintenance via semi-conservative replication term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Upf1 UPF1 RNA helicase and ATPase involved_in ISO (PMID:21829167) BHF-UCL PMID:21829167 NCBI chrNW_004936596:2,469,444...2,505,688 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12173
    cellular process 11372
      cell cycle process 961
        cell cycle DNA replication 25
          DNA endoreduplication + 5
          DNA strand elongation involved in cell cycle DNA replication + 0
          bacterial-type DNA replication + 0
          cell cycle DNA replication DNA ligation + 0
          cell cycle DNA replication DNA unwinding + 0
          cell cycle DNA replication initiation + 0
          cell cycle DNA replication maintenance of fidelity + 1
          cell cycle DNA replication termination + 0
          nuclear DNA replication + 20
          pre-replicative complex assembly involved in cell cycle DNA replication + 0
          synthesis of RNA primer involved in cell cycle DNA replication + 0
Path 2
Term Annotations click to browse term
  biological_process 12173
    metabolic process 7652
      organic substance metabolic process 7378
        macromolecule metabolic process 6346
          cellular macromolecule metabolic process 5418
            cellular macromolecule biosynthetic process 3148
              DNA replication 188
                DNA-dependent DNA replication 108
                  cell cycle DNA replication 25
                    DNA endoreduplication + 5
                    DNA strand elongation involved in cell cycle DNA replication + 0
                    bacterial-type DNA replication + 0
                    cell cycle DNA replication DNA ligation + 0
                    cell cycle DNA replication DNA unwinding + 0
                    cell cycle DNA replication initiation + 0
                    cell cycle DNA replication maintenance of fidelity + 1
                    cell cycle DNA replication termination + 0
                    nuclear DNA replication + 20
                    pre-replicative complex assembly involved in cell cycle DNA replication + 0
                    synthesis of RNA primer involved in cell cycle DNA replication + 0
paths to the root