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ONTOLOGY REPORT - ANNOTATIONS


Term:mitotic DNA integrity checkpoint signaling
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Accession:GO:0044774 term browser browse the term
Definition:A signaling process that controls cell cycle progression in response to changes in DNA structure by monitoring the integrity of the DNA during mitosis. The DNA integrity checkpoint begins with detection of DNA damage, defects in DNA structure or DNA replication, and ends with signal transduction.
Synonyms:exact_synonym: intracellular signal transduction involved in mitotic cell cycle G2/M transition decatenation checkpoint;   intracellular signal transduction involved in topo II checkpoint;   intracellular signal transduction pathway involved in mitotic DNA integrity checkpoint;   intracellular signaling cascade involved in mitotic DNA integrity checkpoint;   intracellular signaling cascade involved in mitotic cell cycle G2/M transition decatenation checkpoint;   intracellular signaling cascade involved in topo II checkpoint;   intracellular signaling chain involved in mitotic DNA integrity checkpoint;   intracellular signaling chain involved in mitotic cell cycle G2/M transition decatenation checkpoint;   intracellular signaling pathway involved in mitotic DNA integrity checkpoint;   mitotic DNA integrity checkpoint;   mitotic cell cycle G2/M transition decatenation checkpoint;   signal transduction involved in mitotic DNA integrity checkpoint
 narrow_synonym: intracellular signal transduction pathway involved in mitotic cell cycle G2/M transition decatenation checkpoint;   intracellular signal transduction pathway involved in topo II checkpoint;   intracellular signal transduction pathway involved in topoisomerase II checkpoint;   intracellular signaling pathway involved in topo II checkpoint
 related_synonym: intracellular signaling pathway involved in mitotic cell cycle G2/M transition decatenation checkpoint;   intracellular signaling pathway involved in topoisomerase II checkpoint;   signal transduction via intracellular signaling cascade involved in mitotic cell cycle G2/M transition decatenation checkpoint;   signal transduction via intracellular signaling cascade involved in topo II checkpoint
 alt_id: GO:0070683;   GO:1902403


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mitotic DNA integrity checkpoint signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC102020128 histone-lysine N-methyltransferase SETMAR involved_in ISO (PMID:18790802) UniProt PMID:18790802 NCBI chrNW_004955421:9,066,906...9,080,352 JBrowse link
DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casp2 caspase 2 involved_in ISO (PMID:21726810) UniProt PMID:21726810 NCBI chrNW_004955494:353,572...369,207
Ensembl chrNW_004955494:353,310...368,873
JBrowse link
G Cdkn1a cyclin dependent kinase inhibitor 1A involved_in ISO (PMID:15149599) BHF-UCL PMID:15149599 NCBI chrNW_004955437:6,254,638...6,261,278
Ensembl chrNW_004955437:6,254,309...6,261,479
JBrowse link
G E2f7 E2F transcription factor 7 involved_in ISO (PMID:22802528) UniProt PMID:22802528 NCBI chrNW_004955405:16,148,640...16,187,272
Ensembl chrNW_004955405:16,148,480...16,186,282
JBrowse link
G Mdm2 MDM2 proto-oncogene involved_in ISO (PMID:21726810) UniProt PMID:21726810 NCBI chrNW_004955458:15,264,028...15,287,290
Ensembl chrNW_004955458:15,263,739...15,286,808
JBrowse link
G Muc1 mucin 1, cell surface associated involved_in ISO (PMID:15710329) BHF-UCL PMID:15710329 NCBI chrNW_004955545:1,657,728...1,662,112 JBrowse link
G Pcbp4 poly(rC) binding protein 4 involved_in ISO (PMID:10891498) UniProt PMID:10891498 NCBI chrNW_004955532:3,604,720...3,615,112
Ensembl chrNW_004955532:3,603,975...3,614,290
JBrowse link
G Pidd1 p53-induced death domain protein 1 involved_in ISO (PMID:21726810) UniProt PMID:21726810 NCBI chrNW_004955476:11,325,877...11,331,447
Ensembl chrNW_004955476:11,326,626...11,331,360
JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (MGI:3580934|PMID:15626733) UniProt PMID:15626733 MGI:3580934 NCBI chrNW_004955450:3,654,854...3,692,057
Ensembl chrNW_004955450:3,656,498...3,692,406
JBrowse link
G Ppp2r5c protein phosphatase 2 regulatory subunit B'gamma involved_in ISO (PMID:17245430) UniProt PMID:17245430 NCBI chrNW_004955538:1,233,511...1,363,956
Ensembl chrNW_004955538:1,276,083...1,361,639
JBrowse link
G Prap1 proline rich acidic protein 1 involved_in ISO (PMID:23235459) UniProt PMID:23235459 NCBI chrNW_004955477:10,982,530...11,002,747
Ensembl chrNW_004955477:10,999,168...11,002,651
JBrowse link
G Rbm38 RNA binding motif protein 38 involved_in ISO (PMID:17050675) UniProt PMID:17050675 NCBI chrNW_004955445:2,036,314...2,050,882
Ensembl chrNW_004955445:2,036,124...2,052,139
JBrowse link
G Rpl26 ribosomal protein L26 involved_in ISO (PMID:16213212)
(MGI:5882892|PMID:16213212)
CAFA PMID:16213212 MGI:5882892 NCBI chrNW_004955467:8,519,760...8,525,514
Ensembl chrNW_004955467:8,519,760...8,527,182
JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within
ISO (PMID:16213212)
(PMID:16107883)
CAFA
MGI
PMID:16107883 PMID:16213212 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928
JBrowse link
mitotic DNA damage checkpoint signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Znf830 zinc finger protein 830 acts_upstream_of_or_within ISO (PMID:23213458) MGI PMID:23213458 NCBI chrNW_004955481:9,661,791...9,663,326
Ensembl chrNW_004955481:9,661,830...9,662,918
JBrowse link
mitotic DNA replication checkpoint signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clspn claspin involved_in ISO (PMID:16885022) UniProt PMID:16885022 NCBI chrNW_004955452:13,801,073...13,842,387
Ensembl chrNW_004955452:13,802,285...13,833,735
JBrowse link
G Donson DNA replication fork stabilization factor DONSON involved_in ISO (PMID:28191891) UniProt PMID:28191891 NCBI chrNW_004955407:33,007,257...33,014,600
Ensembl chrNW_004955407:33,007,257...33,015,039
JBrowse link
G Nae1 NEDD8 activating enzyme E1 subunit 1 involved_in ISO (PMID:10722740) UniProt PMID:10722740 NCBI chrNW_004955433:23,333,797...23,358,255
Ensembl chrNW_004955433:23,333,742...23,358,579
JBrowse link
G Znf830 zinc finger protein 830 involved_in ISO (MGI:4950701|PMID:21191184) UniProt PMID:21191184 MGI:4950701 NCBI chrNW_004955481:9,661,791...9,663,326
Ensembl chrNW_004955481:9,661,830...9,662,918
JBrowse link
mitotic G1 DNA damage checkpoint signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccnd1 cyclin D1 involved_in ISO (PMID:19412162) UniProt PMID:19412162 NCBI chrNW_004955422:16,449,921...16,462,676
Ensembl chrNW_004955422:16,448,770...16,463,300
JBrowse link
G Dgkz diacylglycerol kinase zeta involved_in ISO (PMID:16286473) UniProt PMID:16286473 NCBI chrNW_004955422:1,658,237...1,687,000
Ensembl chrNW_004955422:1,657,926...1,695,404
JBrowse link
G Fbxo31 F-box protein 31 involved_in ISO (PMID:19412162) UniProt PMID:19412162 NCBI chrNW_004955541:1,811,010...1,828,734
Ensembl chrNW_004955541:1,811,010...1,828,724
JBrowse link
G Gigyf2 GRB10 interacting GYF protein 2 acts_upstream_of_or_within ISO (PMID:19744960) MGI PMID:19744960 NCBI chrNW_004955453:3,201,593...3,301,541
Ensembl chrNW_004955453:3,203,358...3,301,547
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in ISO (PMID:21731742) UniProt PMID:21731742 NCBI chrNW_004955454:7,733,697...7,890,896
Ensembl chrNW_004955454:7,733,978...7,890,867
JBrowse link
G Rfwd3 ring finger and WD repeat domain 3 involved_in ISO (PMID:20173098) UniProt PMID:20173098 NCBI chrNW_004955484:2,824,057...2,857,321
Ensembl chrNW_004955484:2,824,422...2,858,283
JBrowse link
G Rpa2 replication protein A2 involved_in ISO (PMID:21731742) UniProt PMID:21731742 NCBI chrNW_004955452:7,080,641...7,098,009
Ensembl chrNW_004955452:7,080,579...7,097,742
JBrowse link
G Rps27l ribosomal protein S27 like involved_in ISO (PMID:18056458) UniProt PMID:18056458 NCBI chrNW_004955450:12,122,948...12,126,167
Ensembl chrNW_004955450:12,122,921...12,128,101
JBrowse link
G Sde2 SDE2 telomere maintenance homolog involved_in ISO (PMID:27906959) UniProt PMID:27906959 NCBI chrNW_004955489:181,425...210,966
Ensembl chrNW_004955489:180,414...210,900
JBrowse link
G Tp53 tumor protein p53 involved_in
acts_upstream_of_or_within
ISO (PMID:7958916)
(PMID:16107883)
BHF-UCL
MGI
PMID:7958916 PMID:16107883 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928
JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (PMID:23993650)
(PMID:18045533)
MGI PMID:18045533 PMID:23993650 NCBI chrNW_004955532:533,877...535,767
Ensembl chrNW_004955532:533,877...535,767
JBrowse link
G Wac WW domain containing adaptor with coiled-coil involved_in ISO (PMID:21329877) UniProt PMID:21329877 NCBI chrNW_004955462:2,358,842...2,435,644
Ensembl chrNW_004955462:2,358,842...2,435,628
JBrowse link
mitotic G2 DNA damage checkpoint signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abraxas1 abraxas 1, BRCA1 A complex subunit involved_in ISO (PMID:17525340), (PMID:17643121), (PMID:19261748) UniProt PMID:17525340 PMID:17643121 PMID:19261748 NCBI chrNW_004955474:6,252,321...6,265,518
Ensembl chrNW_004955474:6,252,321...6,265,286
JBrowse link
G Atm ATM serine/threonine kinase involved_in ISO (PMID:15149599) BHF-UCL PMID:15149599 NCBI chrNW_004955412:10,422,753...10,531,406
Ensembl chrNW_004955412:10,426,135...10,530,545
JBrowse link
G Babam1 BRISC and BRCA1 A complex member 1 involved_in ISO (PMID:19261746), (PMID:19261748), (PMID:19261749) UniProt PMID:19261746 PMID:19261748 PMID:19261749 NCBI chrNW_004955524:939,250...944,457
Ensembl chrNW_004955524:937,815...944,456
JBrowse link
G Babam2 BRISC and BRCA1 A complex member 2 involved_in ISO (PMID:19261748) UniProt PMID:19261748 NCBI chrNW_004955469:9,831,488...10,246,631
Ensembl chrNW_004955469:9,831,488...10,246,899
JBrowse link
G Blm BLM RecQ like helicase involved_in ISO (PMID:11309417) UniProt PMID:11309417 NCBI chrNW_004955416:14,814,753...14,899,865
Ensembl chrNW_004955416:14,842,033...14,899,687
JBrowse link
G Brca1 BRCA1 DNA repair associated involved_in ISO (PMID:17525340), (PMID:17643121), (PMID:19261748) UniProt PMID:17525340 PMID:17643121 PMID:19261748 NCBI chrNW_004955451:16,819,463...16,870,780
Ensembl chrNW_004955451:16,819,023...16,855,528
JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex subunit 3 involved_in ISO (PMID:17525341), (PMID:19261746), (PMID:19261748) UniProt PMID:17525341 PMID:19261746 PMID:19261748 NCBI chrNW_004955594:551,407...613,772
Ensembl chrNW_004955594:554,081...613,661
JBrowse link
G Brsk1 BR serine/threonine kinase 1 involved_in ISO (PMID:15150265) UniProt PMID:15150265 NCBI chrNW_004955567:924,728...943,092
Ensembl chrNW_004955567:924,734...943,701
JBrowse link
G Ccng1 cyclin G1 ISO RGD PMID:9464250 RGD:2316029 NCBI chrNW_004955408:16,846,050...16,850,365 JBrowse link
G Cdc14b cell division cycle 14B involved_in ISO (PMID:18662541) UniProt PMID:18662541 NCBI chrNW_004955422:23,303,472...23,445,785
Ensembl chrNW_004955422:23,303,250...23,322,493
JBrowse link
G Cdk1 cyclin dependent kinase 1 acts_upstream_of_or_within ISO (PMID:12937170) MGI PMID:12937170 NCBI chrNW_004955425:14,210,681...14,226,474
Ensembl chrNW_004955425:14,210,680...14,226,474
JBrowse link
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 involved_in ISO (PMID:15790566) UniProt PMID:15790566 NCBI chrNW_004955451:13,160,811...13,170,012
Ensembl chrNW_004955451:13,120,761...13,170,073
JBrowse link
G Cdkn1a cyclin dependent kinase inhibitor 1A involved_in ISO (PMID:23213251) UniProt PMID:23213251 NCBI chrNW_004955437:6,254,638...6,261,278
Ensembl chrNW_004955437:6,254,309...6,261,479
JBrowse link
G Chek1 checkpoint kinase 1 involved_in ISO (PMID:20932473) UniProt PMID:20932473 NCBI chrNW_004955412:26,627,606...26,650,554 JBrowse link
G Clspn claspin involved_in ISO (PMID:18662541) UniProt PMID:18662541 NCBI chrNW_004955452:13,801,073...13,842,387
Ensembl chrNW_004955452:13,802,285...13,833,735
JBrowse link
G Creb3l1 cAMP responsive element binding protein 3 like 1 involved_in ISO (PMID:37178686) UniProt PMID:37178686 NCBI chrNW_004955422:1,702,131...1,734,603
Ensembl chrNW_004955422:1,700,692...1,734,773
JBrowse link
G CUNH10orf90 chromosome unknown C10orf90 homolog involved_in ISO (MGI:4455105|PMID:20154723) UniProt PMID:20154723 MGI:4455105 NCBI chrNW_004955477:4,299,277...4,510,702
Ensembl chrNW_004955477:4,297,588...4,510,959
JBrowse link
G Donson DNA replication fork stabilization factor DONSON involved_in ISO (PMID:28191891) UniProt PMID:28191891 NCBI chrNW_004955407:33,007,257...33,014,600
Ensembl chrNW_004955407:33,007,257...33,015,039
JBrowse link
G Dtl denticleless E3 ubiquitin protein ligase homolog involved_in ISO (PMID:17085480) UniProt PMID:17085480 NCBI chrNW_004955406:5,256,057...5,299,573
Ensembl chrNW_004955406:5,254,558...5,299,573
JBrowse link
G Foxn3 forkhead box N3 involved_in ISO (PMID:9154802) UniProt PMID:9154802 NCBI chrNW_004955438:11,720,563...12,126,185
Ensembl chrNW_004955438:11,720,570...12,126,185
JBrowse link
G Foxo4 forkhead box O4 acts_upstream_of_or_within ISO (PMID:12048180) MGI PMID:12048180 NCBI chrNW_004955475:10,666,024...10,673,717
Ensembl chrNW_004955475:10,665,987...10,674,110
JBrowse link
G Fzr1 fizzy and cell division cycle 20 related 1 involved_in ISO (PMID:18662541) UniProt PMID:18662541 NCBI chrNW_004955495:5,481,914...5,503,690
Ensembl chrNW_004955495:5,481,916...5,505,521
JBrowse link
G Ier3 immediate early response 3 acts_upstream_of_or_within ISO (PMID:20467439) MGI PMID:20467439 NCBI chrNW_004955583:730,353...731,301
Ensembl chrNW_004955583:730,289...731,260
JBrowse link
G Mbd4 methyl-CpG binding domain 4, DNA glycosylase acts_upstream_of_or_within ISO (PMID:14614141) MGI PMID:14614141 NCBI chrNW_004955429:17,858,656...17,868,111
Ensembl chrNW_004955429:17,858,937...17,869,262
JBrowse link
G Mbtps1 membrane bound transcription factor peptidase, site 1 involved_in ISO (PMID:37178686) UniProt PMID:37178686 NCBI chrNW_004955564:176,230...226,555
Ensembl chrNW_004955564:176,230...228,587
JBrowse link
G Mbtps2 membrane bound transcription factor peptidase, site 2 involved_in ISO (PMID:37178686) UniProt PMID:37178686 NCBI chrNW_004955509:2,185,054...2,222,497
Ensembl chrNW_004955509:2,184,522...2,222,505
JBrowse link
G Mrnip MRN complex interacting protein involved_in ISO (PMID:27568553) UniProt PMID:27568553 NCBI chrNW_004955408:726,124...758,851 JBrowse link
G Nbn nibrin involved_in
acts_upstream_of_or_within
ISO (PMID:11438675)
(PMID:18614044)
UniProt
MGI
PMID:11438675 PMID:18614044 NCBI chrNW_004955417:6,840,916...6,880,479
Ensembl chrNW_004955417:6,839,312...6,880,133
JBrowse link
G Nop53 NOP53 ribosome biogenesis factor involved_in ISO (PMID:21741933) UniProt PMID:21741933 NCBI chrNW_004955574:1,505,997...1,514,680
Ensembl chrNW_004955574:1,506,022...1,517,130
JBrowse link
G Plk1 polo like kinase 1 involved_in ISO (PMID:18662541) UniProt PMID:18662541 NCBI chrNW_004955493:2,206,353...2,217,231
Ensembl chrNW_004955493:2,206,353...2,217,231
JBrowse link
G Rint1 RAD50 interactor 1 involved_in ISO (PMID:11096100) BHF-UCL PMID:11096100 NCBI chrNW_004955410:10,121,322...10,144,748
Ensembl chrNW_004955410:10,121,219...10,144,748
JBrowse link
G Syf2 SYF2 pre-mRNA splicing factor acts_upstream_of_or_within ISO (PMID:22448250) MGI PMID:22448250 NCBI chrNW_004955452:4,850,049...4,856,647
Ensembl chrNW_004955452:4,848,659...4,857,114
JBrowse link
G Taok1 TAO kinase 1 involved_in ISO (PMID:17396146) UniProt PMID:17396146 NCBI chrNW_004955481:3,698,686...3,836,209
Ensembl chrNW_004955481:3,705,202...3,772,116
JBrowse link
G Taok2 TAO kinase 2 involved_in ISO (PMID:17396146) UniProt PMID:17396146 NCBI chrNW_004955493:6,968,537...6,986,608
Ensembl chrNW_004955493:6,969,096...6,985,878
JBrowse link
G Taok3 TAO kinase 3 involved_in ISO (PMID:17396146) UniProt PMID:17396146 NCBI chrNW_004955455:13,020,618...13,207,539
Ensembl chrNW_004955455:13,103,357...13,211,315
JBrowse link
G Uimc1 ubiquitin interaction motif containing 1 involved_in ISO (PMID:17525340), (PMID:17525341), (PMID:17525342), (PMID:17643121), (PMID:19261748) UniProt PMID:17525340 PMID:17525341 PMID:17525342 PMID:17643121 PMID:19261748 NCBI chrNW_004955408:29,154,373...29,274,817
Ensembl chrNW_004955408:29,154,629...29,274,856
JBrowse link
mitotic intra-S DNA damage checkpoint signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 involved_in ISO (PMID:15916964) UniProt PMID:15916964 NCBI chrNW_004955449:332,563...411,218
Ensembl chrNW_004955449:338,193...411,218
JBrowse link
G Chek2 checkpoint kinase 2 involved_in ISO (PMID:11298456) UniProt PMID:11298456 NCBI chrNW_004955455:2,969,113...3,008,004
Ensembl chrNW_004955455:2,969,270...3,003,173
JBrowse link
G Msh2 mutS homolog 2 acts_upstream_of_or_within ISO (PMID:15533840) MGI PMID:15533840 NCBI chrNW_004955441:14,188,315...14,247,608
Ensembl chrNW_004955441:14,187,805...14,247,698
JBrowse link
G Nek11 NIMA related kinase 11 involved_in ISO (PMID:15161910) UniProt PMID:15161910 NCBI chrNW_004955501:7,107,858...7,375,079
Ensembl chrNW_004955501:7,108,526...7,374,984
JBrowse link
G Rad17 RAD17 checkpoint clamp loader component involved_in ISO (PMID:15538388) UniProt PMID:15538388 NCBI chrNW_004955575:78,686...115,072
Ensembl chrNW_004955575:78,335...115,129
JBrowse link
G Rad9a RAD9 checkpoint clamp component A acts_upstream_of_or_within ISO (PMID:9766521) MGI PMID:9766521 NCBI chrNW_004955422:18,079,634...18,146,122
Ensembl chrNW_004955422:18,079,652...18,085,548
JBrowse link
G Tipin TIMELESS interacting protein involved_in ISO (PMID:17102137) HGNC-UCL PMID:17102137 NCBI chrNW_004955450:9,259,838...9,279,479
Ensembl chrNW_004955450:9,262,717...9,279,401
JBrowse link
G Xpc XPC complex subunit, DNA damage recognition and repair factor acts_upstream_of_or_within ISO (PMID:15533840) MGI PMID:15533840 NCBI chrNW_004955429:16,935,901...16,968,285
Ensembl chrNW_004955429:16,935,901...16,955,845
JBrowse link
negative regulation of mitotic DNA damage checkpoint term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppp1r10 protein phosphatase 1 regulatory subunit 10 involved_in ISO (PMID:23426265) BHF-UCL PMID:23426265 NCBI chrNW_004955583:621,380...635,595
Ensembl chrNW_004955583:621,092...634,929
JBrowse link
positive regulation of mitotic DNA damage checkpoint term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Map3k20 mitogen-activated protein kinase kinase kinase 20 involved_in ISO (PMID:15342622) UniProt PMID:15342622 NCBI chrNW_004955449:1,976,186...2,139,044 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12321
    cellular process 11505
      cell cycle process 1052
        mitotic cell cycle process 601
          mitotic cell cycle checkpoint signaling 116
            mitotic DNA integrity checkpoint signaling 72
              mitotic DNA damage checkpoint signaling + 70
              mitotic DNA replication checkpoint signaling 4
Path 2
Term Annotations click to browse term
  biological_process 12321
    biological regulation 8863
      regulation of biological process 8603
        regulation of cellular process 8187
          regulation of cell cycle 895
            regulation of cell cycle process 634
              regulation of cell cycle phase transition 346
                negative regulation of cell cycle phase transition 208
                  cell cycle checkpoint signaling 153
                    DNA integrity checkpoint signaling 108
                      mitotic DNA integrity checkpoint signaling 72
                        mitotic DNA damage checkpoint signaling + 70
                        mitotic DNA replication checkpoint signaling 4
paths to the root