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ONTOLOGY REPORT - ANNOTATIONS


Term:multi-organism transport
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Accession:GO:0044766 term browser browse the term
Definition:The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore, involving more than one organism.


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clathrin-dependent endocytosis of virus by host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Siglec1 sialic acid binding Ig like lectin 1 involved_in IBA
ISO
PMID:21873635
(PMID:12857889)
RGD PMID:12857889, PMID:21873635 RGD:13792537 NCBI chr 3:123,612,067...123,631,718
Ensembl chr 3:123,612,067...123,631,109
JBrowse link
entry of viral genome into host nucleus through nuclear pore complex via importin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kpna2 karyopherin subunit alpha 2 involved_in
acts_upstream_of_or_within
ISO (PMID:28189564)
(MGI:5898166|PMID:28189564)
RGD PMID:28189564 MGI:5898166 NCBI chr10:95,200,029...95,212,111
Ensembl chr10:95,200,030...95,212,111
JBrowse link
G Kpna6 karyopherin subunit alpha 6 involved_in
acts_upstream_of_or_within
ISO (PMID:28189564)
MGI:3856636 (MGI:5898166|PMID:28189564)
RGD PMID:28189564 MGI:5898166 NCBI chr 5:147,852,738...147,867,600
Ensembl chr 5:147,850,275...147,886,615
JBrowse link
intracellular transport of viral protein in host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dynlt1 dynein light chain Tctex-type 1 involved_in ISO (PMID:18647839) RGD PMID:18647839 NCBI chr 1:47,206,892...47,213,785
Ensembl chr 1:47,206,895...47,213,749
JBrowse link
intracellular transport of virus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dync1i1 dynein cytoplasmic 1 intermediate chain 1 involved_in ISO (PMID:25540360) RGD PMID:25540360 NCBI chr 4:30,807,755...31,121,097
Ensembl chr 4:30,807,879...31,121,090
JBrowse link
negative regulation of intracellular transport of viral material term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bst2 bone marrow stromal cell antigen 2 involved_in ISO
ISS
(PMID:19036818), (PMID:20686043), (PMID:20943977)
(MGI:5437405|PMID:22284121), (MGI:5437427|PMID:20686043), (MGI:5448513|PMID:21919738)
GO_REF:0000024
RGD
UniProt
PMID:19036818 PMID:20686043 PMID:20943977 PMID:21919738 PMID:22284121 GO_REF:0000024 MGI:5437405 MGI:5437427 MGI:5448513 NCBI chr16:19,938,781...19,942,353
Ensembl chr16:19,938,784...19,942,353
JBrowse link
G Mx2 MX dynamin like GTPase 2 involved_in ISO (PMID:20167191) RGD PMID:20167191 NCBI chr11:38,035,306...38,066,185
Ensembl chr11:38,035,450...38,059,950
JBrowse link
G Trim15 tripartite motif containing 15 involved_in ISO (PMID:18248090) RGD PMID:18248090 NCBI chr20:2,194,293...2,203,636
Ensembl chr20:2,194,709...2,201,668
JBrowse link
positive regulation of intracellular transport of viral material term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fmr1 FMRP translational regulator 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:24514761)
Ensembl
RGD
PMID:24514761 GO_REF:0000107 NCBI chr  X:154,684,924...154,722,369
Ensembl chr  X:154,684,935...154,722,314
JBrowse link
receptor-mediated endocytosis of virus by host cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav1 caveolin 1 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:P51636 (PMID:21047970)
Ensembl
RGD
PMID:21047970 GO_REF:0000107 NCBI chr 4:44,597,123...44,630,206
Ensembl chr 4:44,597,123...44,630,200
JBrowse link
G Cav2 caveolin 2 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:O60840 (PMID:21047970)
Ensembl
RGD
PMID:21047970 GO_REF:0000107 NCBI chr 4:44,573,264...44,580,640
Ensembl chr 4:44,573,264...44,580,638
JBrowse link
G Ctsl cathepsin L involved_in ISO (PMID:16081529), (PMID:32221306), (PMID:32855215) RGD PMID:16081529 PMID:32221306 PMID:32855215 NCBI chr17:1,873,105...1,879,266
Ensembl chr17:1,872,848...1,879,279
JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 involved_in ISO (PMID:21047970) RGD PMID:21047970 NCBI chr 5:128,923,809...129,022,268
Ensembl chr 5:128,923,934...129,022,054
JBrowse link
G LOC100294508 dyslexia susceptibility 2-like acts_upstream_of_or_within ISO MGI:5907241|MGI:5907242 (MGI:5750797|PMID:26814968) RGD PMID:26814968 MGI:5750797 NCBI chr 5:144,779,306...144,872,271
Ensembl chr 5:144,779,681...144,872,271
JBrowse link
G Pikfyve phosphoinositide kinase, FYVE-type zinc finger containing involved_in ISO (PMID:32221306) RGD PMID:32221306 NCBI chr 9:71,911,744...72,005,816
Ensembl chr 9:71,915,421...72,005,838
JBrowse link
G Tpcn2 two pore segment channel 2 involved_in ISO (PMID:32221306) RGD PMID:32221306 NCBI chr 1:218,419,182...218,448,902
Ensembl chr 1:218,419,184...218,448,877
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19634
    localization 6435
      multi-organism localization 16
        multi-organism transport 16
          intracellular transport of viral protein in host cell 1
          multi-organism intercellular transport + 0
          multi-organism macropinocytosis + 0
          multi-organism micropinocytosis 0
          multi-organism nuclear import 0
          transport of virus + 15
Path 2
Term Annotations click to browse term
  biological_process 19634
    localization 6435
      establishment of localization 4860
        transport 4697
          multi-organism transport 16
            intracellular transport of viral protein in host cell 1
            multi-organism intercellular transport + 0
            multi-organism macropinocytosis + 0
            multi-organism micropinocytosis 0
            multi-organism nuclear import 0
            transport of virus + 15
paths to the root