ONTOLOGY REPORT - ANNOTATIONS
Term: NLRP3 inflammasome complex assembly
Accession: GO:0044546
browse the term
Definition: The aggregation, arrangement and bonding together of a set of components to form the NLRP3 inflammasome complex, occurring at the level of an individual cell.
Synonyms: exact_synonym: NALP3 inflammasome complex assembly
related_synonym: NLRP3 inflammasome activation
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Atat1
alpha tubulin acetyltransferase 1
involved_in acts_upstream_of
IEA ISO
GO_REF:0000107 (PMID:23502856)
Ensembl RGD
PMID:23502856
GO_REF:0000107
NCBI chr20:2,844,595...2,857,809
Ensembl chr20:2,844,616...2,861,964
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Kcnj8
potassium inwardly-rectifying channel, subfamily J, member 8
acts_upstream_of_or_within
ISO
MGI:2180015 (PMID:28928055)
RGD
PMID:28928055
NCBI chr 4:175,508,908...175,515,829
Ensembl chr 4:175,508,912...175,515,603
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Nlrp3
NLR family, pyrin domain containing 3
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:5465108 (PMID:22753929) (MGI:5492224|PMID:23582325), (MGI:5792478|PMID:27043286), (MGI:5913002|PMID:28716882), (MGI:5921465|PMID:28656979), (MGI:6106673|PMID:28943315), (MGI:6260219|PMID:30487600), (MGI:6787653|PMID:34615873), (MGI:6844859|PMID:34861190), (MGI:6859739|PMID:28465465), (PMID:26173909) (PMID:17483456), (PMID:23582325), (PMID:25686105), (PMID:27043286), (PMID:27432880), (PMID:28465465), (PMID:28656979), (PMID:28943315), (PMID:30487600), (PMID:31189953), (PMID:33231615), (PMID:34554188), (PMID:34615873), (PMID:35114687), (PMID:35254907), (PMID:35559676), (PMID:36442502)
UniProt RGD
PMID:17483456 PMID:22753929 PMID:23582325 PMID:25686105 PMID:26173909 PMID:27043286 PMID:27432880 PMID:28465465 PMID:28656979 PMID:28716882 PMID:28943315 PMID:30487600 PMID:31189953 PMID:33231615 PMID:34554188 PMID:34615873 PMID:34861190 PMID:35114687 PMID:35254907 PMID:35559676 PMID:36442502 More...
GO_REF:0000024 MGI:5492224 MGI:5792478 MGI:5913002 MGI:5921465 MGI:6106673 MGI:6260219 MGI:6787653 MGI:6844859 MGI:6859739
NCBI chr10:44,326,770...44,353,814
Ensembl chr10:44,328,566...44,352,811
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Pycard
PYD and CARD domain containing
involved_in
ISO
(PMID:27432880)
RGD
PMID:27432880
NCBI chr 1:182,601,657...182,603,013
Ensembl chr 1:182,601,174...182,602,955
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Sirt2
sirtuin 2
involved_in acts_upstream_of
IEA ISO
GO_REF:0000107 (PMID:23502856)
Ensembl RGD
PMID:23502856
GO_REF:0000107
NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975
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Abhd17a
abhydrolase domain containing 17A, depalmitoylase
involved_in
ISO
(PMID:38092000)
RGD
PMID:38092000
NCBI chr 7:9,124,332...9,132,762
Ensembl chr 7:9,124,332...9,130,762
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Cptp
ceramide-1-phosphate transfer protein
involved_in
ISO ISS
(PMID:29164996) GO_REF:0000024
RGD UniProt
PMID:29164996
GO_REF:0000024
NCBI chr 5:166,474,947...166,479,103
Ensembl chr 5:166,474,966...166,479,017
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Csnk1a1
casein kinase 1, alpha 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:6787653|PMID:34615873)
UniProt RGD
PMID:34615873
GO_REF:0000024 MGI:6787653
NCBI chr18:55,017,049...55,050,184
Ensembl chr18:55,017,055...55,049,271
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Fbxl2
F-box and leucine-rich repeat protein 2
involved_in
ISO
(PMID:26037928)
RGD
PMID:26037928
NCBI chr 8:113,916,660...113,965,137
Ensembl chr 8:113,913,373...113,965,066
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Haus8l2
HAUS augmin-like complex, subunit 8 like 2
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr11:5,628,432...5,630,535
Ensembl chr11:5,628,427...5,630,533
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Hspa8
heat shock protein family A (Hsp70) member 8
involved_in
ISO IEA
(PMID:36586411) GO_REF:0000107
RGD Ensembl
PMID:36586411
GO_REF:0000107
NCBI chr 8:41,183,397...41,187,260
Ensembl chr 8:41,183,264...41,187,259
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Irgm
immunity-related GTPase M
involved_in
ISS ISO
GO_REF:0000024 (MGI:6282153|PMID:30612879) (PMID:30612879)
UniProt RGD
PMID:30612879
GO_REF:0000024 MGI:6282153
NCBI chr10:33,233,513...33,241,594
Ensembl chr10:33,233,455...33,241,578
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Lamp2
lysosomal-associated membrane protein 2
involved_in
ISO
(PMID:36586411)
RGD
PMID:36586411
NCBI chr X:117,173,097...117,222,090
Ensembl chr X:117,057,606...117,260,522
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Mefv
MEFV innate immunity regulator, pyrin
involved_in
ISS ISO
GO_REF:0000024 (PMID:26347139)
UniProt RGD
PMID:26347139
GO_REF:0000024
NCBI chr10:11,786,948...11,796,977
Ensembl chr10:11,787,422...11,796,973
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Nlrc3
NLR family, CARD domain containing 3
involved_in
ISO
(PMID:25277106)
RGD
PMID:25277106
NCBI chr10:11,551,378...11,585,027
Ensembl chr10:11,551,356...11,584,398
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Sirt2
sirtuin 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:23502856)
Ensembl RGD
PMID:23502856
GO_REF:0000107
NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975
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Trem2
triggering receptor expressed on myeloid cells 2
acts_upstream_of_or_within
ISO
(MGI:6391726|PMID:29887864) (PMID:32514138)
RGD
PMID:29887864 PMID:32514138
MGI:6391726
NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170
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Trim31
tripartite motif-containing 31
involved_in
ISO
(PMID:27929086) (MGI:5907951|PMID:27929086)
RGD
PMID:27929086
MGI:5907951
NCBI chr20:1,653,165...1,666,494
Ensembl chr20:1,653,165...1,666,494
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Zdhhc12
zinc finger DHHC-type palmitoyltransferase 12
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:36586411)
UniProt Ensembl RGD
PMID:36586411
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:13,363,504...13,366,383
Ensembl chr 3:13,363,504...13,366,474
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Atat1
alpha tubulin acetyltransferase 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:23502856)
Ensembl RGD
PMID:23502856
GO_REF:0000107
NCBI chr20:2,844,595...2,857,809
Ensembl chr20:2,844,616...2,861,964
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Brcc3
BRCA1/BRCA2-containing complex subunit 3
involved_in
ISS ISO
GO_REF:0000024 (MGI:7387171|PMID:23246432) (PMID:28943315)
UniProt RGD
PMID:23246432 PMID:28943315
GO_REF:0000024 MGI:7387171
NCBI chr 9:1,986,942...1,989,484
Ensembl chr 9:1,986,575...1,991,080
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Btk
Bruton tyrosine kinase
involved_in
ISO
(PMID:34554188) (MGI:7276081|PMID:34554188)
RGD
PMID:34554188
MGI:7276081
NCBI chr X:97,722,796...97,762,315
Ensembl chr X:97,722,802...97,761,853
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Casp4
caspase 4
involved_in
ISO
(MGI:5780643|PMID:26173909)
RGD
PMID:26173909
MGI:5780643
NCBI chr 8:2,599,017...2,635,097
Ensembl chr 8:2,598,876...2,635,092
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Cd36
CD36 molecule
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:5546292|PMID:23812099) GO_REF:0000107
UniProt RGD Ensembl
PMID:23812099
GO_REF:0000024 GO_REF:0000107 MGI:5546292
NCBI chr 4:17,317,343...17,410,084
Ensembl chr 4:17,354,466...17,513,903
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Cd36l1
CD36 molecule like 1
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr 4:17,424,749...17,465,808
Ensembl chr 4:17,354,466...17,513,903
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Ddx3x
DEAD-box helicase 3, X-linked
involved_in
ISO
(MGI:6368386|PMID:31511697)
RGD
PMID:31511697
MGI:6368386
NCBI chr X:9,479,532...9,493,169
Ensembl chr X:9,479,532...9,493,168
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Dhx33
DEAH-box helicase 33
involved_in
ISO
(PMID:23871209)
RGD
PMID:23871209
NCBI chr10:55,708,102...55,724,618
Ensembl chr10:55,705,756...55,724,567
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Gbp5
guanylate binding protein 5
involved_in
ISO
(PMID:22461501)
RGD
PMID:22461501
NCBI chr 2:231,237,748...231,257,071
Ensembl chr 2:231,237,748...231,257,061
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Mapk8
mitogen-activated protein kinase 8
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:28943315) (MGI:6106673|PMID:28943315) GO_REF:0000107
UniProt RGD Ensembl
PMID:28943315
GO_REF:0000024 GO_REF:0000107 MGI:6106673
NCBI chr16:8,638,897...8,721,960
Ensembl chr16:8,638,924...8,721,981
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Mark4
microtubule affinity regulating kinase 4
involved_in
ISO
(PMID:28656979) (MGI:5921465|PMID:28656979)
RGD
PMID:28656979
MGI:5921465
NCBI chr 1:79,075,353...79,108,882
Ensembl chr 1:79,068,904...79,108,556
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Mavs
mitochondrial antiviral signaling protein
involved_in
ISO
(PMID:23582325) (MGI:5492224|PMID:23582325)
RGD
PMID:23582325
MGI:5492224
NCBI chr 3:118,451,650...118,466,094
Ensembl chr 3:118,451,743...118,466,094
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Mir21
microRNA 21
IDA
RGD
PMID:29084974
RGD:41404715
NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348
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Myd88
MYD88, innate immune signal transduction adaptor
involved_in
ISS ISO
GO_REF:0000024 (PMID:33718825)
UniProt RGD
PMID:33718825
GO_REF:0000024
NCBI chr 8:119,074,439...119,078,508
Ensembl chr 8:119,074,437...119,079,415
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Nek7
NIMA-related kinase 7
involved_in
ISO ISS IEA
(MGI:5698271|PMID:26642356), (MGI:5751332|PMID:26814970) GO_REF:0000024 GO_REF:0000107 (PMID:31189953), (PMID:36442502)
RGD UniProt Ensembl
PMID:26642356 PMID:26814970 PMID:31189953 PMID:36442502
GO_REF:0000024 GO_REF:0000107 MGI:5698271 MGI:5751332
NCBI chr13:50,022,212...50,149,374
Ensembl chr13:50,022,218...50,149,296
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Plcg2
phospholipase C, gamma 2
acts_upstream_of_or_within involved_in
ISO IEA
(PMID:32514138) GO_REF:0000107
RGD Ensembl
PMID:32514138
GO_REF:0000107
NCBI chr19:45,547,416...45,683,930
Ensembl chr19:45,547,416...45,683,930
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Ppp2ca
protein phosphatase 2 catalytic subunit alpha
involved_in
ISS ISO
GO_REF:0000024 (MGI:6859739|PMID:28465465)
UniProt RGD
PMID:28465465
GO_REF:0000024 MGI:6859739
NCBI chr10:36,358,110...36,377,864
Ensembl chr10:36,358,101...36,377,862
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Prkd1
protein kinase D1
involved_in
ISS ISO
GO_REF:0000024 (MGI:5913002|PMID:28716882)
UniProt RGD
PMID:28716882
GO_REF:0000024 MGI:5913002
NCBI chr 6:67,725,193...68,039,002
Ensembl chr 6:67,725,905...68,039,042
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Ptpn22
protein tyrosine phosphatase, non-receptor type 22
involved_in
ISO
(PMID:27043286) (MGI:5792478|PMID:27043286)
RGD
PMID:27043286
MGI:5792478
NCBI chr 2:191,366,761...191,414,782
Ensembl chr 2:191,366,808...191,414,779
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Stmp1
short transmembrane mitochondrial protein 1
involved_in
ISO
(MGI:6384515|PMID:31836654)
RGD
PMID:31836654
MGI:6384515
NCBI chr 4:63,927,523...63,937,355
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Tlr4
toll-like receptor 4
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (MGI:5546292|PMID:23812099)
UniProt Ensembl RGD
PMID:23812099
GO_REF:0000024 GO_REF:0000107 MGI:5546292
NCBI chr 5:80,145,867...80,159,501
Ensembl chr 5:80,145,826...80,159,628
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Tlr6
toll-like receptor 6
involved_in
ISO
(MGI:5546292|PMID:23812099)
RGD
PMID:23812099
MGI:5546292
NCBI chr14:43,362,164...43,374,500
Ensembl chr14:43,362,164...43,375,685
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Usp50
ubiquitin specific peptidase 50
acts_upstream_of_or_within
ISO
(PMID:28094437)
RGD
PMID:28094437
NCBI chr 3:114,012,104...114,035,468
Ensembl chr 3:114,011,702...114,035,476
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Zdhhc5
zinc finger DHHC-type palmitoyltransferase 5
involved_in
ISO
(PMID:38092000)
RGD
PMID:38092000
NCBI chr 3:69,772,037...69,800,142
Ensembl chr 3:69,771,890...69,799,921
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Eif2ak2
eukaryotic translation initiation factor 2-alpha kinase 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:5432942|PMID:22801494)
UniProt RGD
PMID:22801494
GO_REF:0000024 MGI:5432942
NCBI chr 6:16,189,000...16,224,972
Ensembl chr 6:16,188,979...16,224,971
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