Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:protein localization to cytoskeleton
go back to main search page
Accession:GO:0044380 term browser browse the term
Definition:A process in which a protein is transported to, or maintained in, a location within the cytoskeleton.
Synonyms:exact_synonym: protein localisation to cytoskeleton



show annotations for term's descendants           Sort by:
 
protein localization to cytoskeleton term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fam83h family with sequence similarity 83, member H involved_in ISO
IBA
(PMID:23902688)
PMID:21873635
RGD PMID:23902688 PMID:21873635 RGD:13792537 NCBI chr 7:107,716,431...107,724,619
Ensembl chr 7:107,716,431...107,728,672
JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A acts_upstream_of_or_within ISO (MGI:3766886|PMID:17720578) RGD PMID:17720578 MGI:3766886 NCBI chr15:49,950,035...50,022,188
Ensembl chr15:49,950,804...50,020,928
JBrowse link
chromosome passenger complex localization to spindle midzone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Klhl21 kelch-like family member 21 involved_in ISO
ISS
(PMID:19995937)
GO_REF:0000024
RGD
UniProt
PMID:19995937 GO_REF:0000024 NCBI chr 5:162,514,888...162,523,545
Ensembl chr 5:162,514,765...162,523,545
JBrowse link
negative regulation of protein localization to centrosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO (MGI:5883382|PMID:28057765) RGD PMID:28057765 MGI:5883382 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
JBrowse link
G Nin ninein acts_upstream_of_or_within ISO (MGI:5805714|PMID:27565344) RGD PMID:27565344 MGI:5805714 NCBI chr 6:88,525,405...88,627,710
Ensembl chr 6:88,525,742...88,627,639
JBrowse link
G Nsfl1c NSFL1 cofactor involved_in ISO UniProtKB:Q14CS0 (PMID:23649807) RGD PMID:23649807 NCBI chr 3:139,978,306...140,002,876
Ensembl chr 3:139,978,301...140,002,870
JBrowse link
G Ubxn2b UBX domain protein 2B involved_in ISO UniProtKB:Q9UNZ2 (PMID:23649807) RGD PMID:23649807 NCBI chr 5:19,303,634...19,333,181
Ensembl chr 5:19,303,682...19,326,849
JBrowse link
negative regulation of protein localization to microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd17a abhydrolase domain containing 17A, depalmitoylase involved_in IMP PMID:28521134 UniProt PMID:28521134 RGD:13441203 NCBI chr 7:9,124,332...9,132,762
Ensembl chr 7:9,124,332...9,130,762
JBrowse link
G Abhd17b abhydrolase domain containing 17B, depalmitoylase involved_in ISO (MGI:6103577|PMID:28521134) RGD PMID:28521134 MGI:6103577 NCBI chr 1:219,198,294...219,232,733
Ensembl chr 1:219,198,471...219,231,933
JBrowse link
G Abhd17c abhydrolase domain containing 17C, depalmitoylase involved_in ISO (MGI:6103577|PMID:28521134) RGD PMID:28521134 MGI:6103577 NCBI chr 1:138,084,632...138,125,595
Ensembl chr 1:138,084,634...138,125,595
JBrowse link
G Map1a microtubule-associated protein 1A involved_in ISO (MGI:5632407|PMID:25788676) RGD PMID:25788676 MGI:5632407 NCBI chr 3:108,263,217...108,283,936
Ensembl chr 3:108,263,151...108,282,899
JBrowse link
G Ttbk2 tau tubulin kinase 2 involved_in ISO (PMID:26323690) RGD PMID:26323690 NCBI chr 3:107,691,123...107,802,911
Ensembl chr 3:107,697,340...107,803,223
JBrowse link
positive regulation of protein localization to actin cortical patch term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppp1r9b protein phosphatase 1, regulatory subunit 9B IMP RGD PMID:18216290 RGD:8554111 NCBI chr10:79,938,055...79,954,085
Ensembl chr10:79,938,066...79,954,083
JBrowse link
positive regulation of protein localization to centrosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC regulator of WNT signaling pathway involved_in ISO
IEA
(PMID:28057765)
(MGI:5883382|PMID:28057765)
GO_REF:0000107
RGD
Ensembl
PMID:28057765 GO_REF:0000107 MGI:5883382 NCBI chr18:25,828,558...25,925,511
Ensembl chr18:25,864,222...25,922,696
JBrowse link
G Bicd1 BICD cargo adaptor 1 involved_in ISO UniProtKB:Q8TD16 (PMID:17139249) RGD PMID:17139249 NCBI chr 4:182,479,071...182,631,504
Ensembl chr 4:182,479,071...182,627,434
JBrowse link
G Cep250 centrosomal protein 250 involved_in ISO (PMID:27623382) RGD PMID:27623382 NCBI chr 3:144,470,946...144,516,125
Ensembl chr 3:144,471,214...144,516,125
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO
IEA
(PMID:17139249)
GO_REF:0000107
RGD
Ensembl
PMID:17139249 GO_REF:0000107 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
JBrowse link
G Mark4 microtubule affinity regulating kinase 4 involved_in ISO (PMID:23400999) RGD PMID:23400999 NCBI chr 1:79,075,353...79,108,882
Ensembl chr 1:79,068,904...79,108,556
JBrowse link
G Nup62 nucleoporin 62 involved_in ISO (PMID:24107630) RGD PMID:24107630 NCBI chr 1:95,298,995...95,314,902
Ensembl chr 1:95,295,526...95,315,174
JBrowse link
G Pard6a par-6 family cell polarity regulator alpha involved_in ISO
ISS
(PMID:20719959)
GO_REF:0000024
RGD
UniProt
PMID:20719959 GO_REF:0000024 NCBI chr19:33,589,583...33,591,900
Ensembl chr19:33,589,542...33,591,900
JBrowse link
positive regulation of protein localization to spindle pole body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Numa1 nuclear mitotic apparatus protein 1 involved_in ISO (PMID:16076287) RGD PMID:16076287 NCBI chr 1:156,297,907...156,372,855
Ensembl chr 1:156,326,259...156,372,855
JBrowse link
protein localization to actin cytoskeleton term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppp1r9b protein phosphatase 1, regulatory subunit 9B IMP Ppp1cc RGD PMID:18216290 RGD:8554111 NCBI chr10:79,938,055...79,954,085
Ensembl chr10:79,938,066...79,954,083
JBrowse link
protein localization to centrosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aurka aurora kinase A acts_upstream_of_or_within ISO (MGI:3697244|PMID:17060449) RGD PMID:17060449 MGI:3697244 NCBI chr 3:161,128,309...161,144,524
Ensembl chr 3:161,128,313...161,144,390
JBrowse link
G Bbs4 Bardet-Biedl syndrome 4 involved_in IGI
IMP
ISO
PMID:18762586
(PMID:15107855)
RGD PMID:15107855 PMID:18762586 PMID:18762586 RGD:10047371, RGD:10047371 NCBI chr 8:59,731,912...59,765,408
Ensembl chr 8:59,731,912...59,765,607
JBrowse link
G C2cd3 C2 domain containing 3 centriole elongation regulator involved_in
acts_upstream_of_or_within
ISO (PMID:24997988)
MGI:3836403 (MGI:5551659|PMID:24469809)
RGD PMID:24469809 PMID:24997988 MGI:5551659 NCBI chr 1:154,715,151...154,812,955
Ensembl chr 1:154,715,310...154,812,520
JBrowse link
G Ccdc14 coiled-coil domain containing 14 involved_in ISO
IBA
(PMID:26297806)
PMID:21873635
RGD PMID:26297806 PMID:21873635 RGD:13792537 NCBI chr11:66,052,063...66,087,915
Ensembl chr11:66,052,620...66,087,956
JBrowse link
G Cep131 centrosomal protein 131 involved_in ISO (PMID:26297806) RGD PMID:26297806 NCBI chr10:105,346,015...105,370,380
Ensembl chr10:105,346,015...105,370,380
JBrowse link
G Cep192 centrosomal protein 192 involved_in ISO (PMID:17980596) RGD PMID:17980596 NCBI chr18:61,346,957...61,458,405
Ensembl chr18:61,332,158...61,458,379
JBrowse link
G Cep350 centrosomal protein 350 acts_upstream_of_or_within ISO (MGI:3720992|PMID:17600711) RGD PMID:17600711 MGI:3720992 NCBI chr13:68,023,327...68,164,478
Ensembl chr13:68,026,891...68,165,214
JBrowse link
G Cep63 centrosomal protein 63 acts_upstream_of_or_within ISO MGI:4377328 (MGI:5662131|PMID:26158450) RGD PMID:26158450 MGI:5662131 NCBI chr 8:103,162,639...103,214,177
Ensembl chr 8:103,162,700...103,214,177
JBrowse link
G Cep83 centrosomal protein 83 acts_upstream_of_or_within ISO (PMID:23348840), (PMID:23530209) RGD PMID:23348840 PMID:23530209 NCBI chr 7:29,280,358...29,389,574
Ensembl chr 7:29,280,419...29,389,574
JBrowse link
G Csnk1d casein kinase 1, delta involved_in ISO (PMID:24648492) RGD PMID:24648492 NCBI chr10:106,221,992...106,256,620
Ensembl chr10:106,221,992...106,256,614
JBrowse link
G Dctn2 dynactin subunit 2 involved_in ISO
IEA
(PMID:24816561)
GO_REF:0000107
RGD
Ensembl
PMID:24816561 GO_REF:0000107 NCBI chr 7:63,092,061...63,107,560
Ensembl chr 7:63,092,057...63,108,543
JBrowse link
G Disc1 DISC1 scaffold protein involved_in IGI
IMP
PMID:18762586 GO_Central PMID:18762586 PMID:18762586 RGD:10047371, RGD:10047371 NCBI chr19:53,014,201...53,223,617
Ensembl chr19:53,014,616...53,219,778
JBrowse link
G Hook3 hook microtubule-tethering protein 3 acts_upstream_of_or_within ISO (MGI:4457463|PMID:20152126) RGD PMID:20152126 MGI:4457463 NCBI chr16:65,954,293...66,058,812
Ensembl chr16:65,954,350...66,061,338
JBrowse link
G Htt huntingtin acts_upstream_of_or_within ISO MGI:2177755|MGI:2386570 (MGI:5298413|PMID:21985783) RGD PMID:21985783 MGI:5298413 NCBI chr14:75,845,836...75,996,094
Ensembl chr14:75,845,836...75,995,070
JBrowse link
G Mapre1 microtubule-associated protein, RP/EB family, member 1 acts_upstream_of_or_within ISO (MGI:3720992|PMID:17600711) RGD PMID:17600711 MGI:3720992 NCBI chr 3:142,218,846...142,246,990
Ensembl chr 3:142,212,955...142,246,983
JBrowse link
G Mcph1 microcephalin 1 acts_upstream_of_or_within ISO MGI:5308745 (MGI:5306866|PMID:21947081) RGD PMID:21947081 MGI:5306866 NCBI chr16:71,021,855...71,224,067
Ensembl chr16:71,024,588...71,224,122
JBrowse link
G Nedd1 NEDD1 gamma-tubulin ring complex targeting factor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:27,233,315...27,274,486
Ensembl chr 7:27,233,316...27,274,486
JBrowse link
G Pcm1 pericentriolar material 1 involved_in
acts_upstream_of_or_within
IMP
ISO
IBA
PMID:18762586
(MGI:4457463|PMID:20152126), (MGI:5551659|PMID:24469809)
(PMID:24816561)
PMID:21873635
RGD PMID:20152126 PMID:24469809 PMID:24816561 PMID:18762586 PMID:21873635 MGI:4457463 MGI:5551659, RGD:10047371, RGD:13792537 NCBI chr16:51,008,315...51,105,261
Ensembl chr16:51,008,315...51,105,091
JBrowse link
G Pibf1 progesterone immunomodulatory binding factor 1 involved_in ISO (PMID:23110211) RGD PMID:23110211 NCBI chr15:75,850,389...76,019,711
Ensembl chr15:75,850,624...76,019,712
JBrowse link
G RGD1304728 similar to 4933427D14Rik protein involved_in ISO
IBA
(PMID:26297806)
PMID:21873635
RGD PMID:26297806 PMID:21873635 RGD:13792537 NCBI chr10:56,783,869...56,832,668
Ensembl chr10:56,783,775...56,832,968
JBrowse link
G Snx10 sorting nexin 10 involved_in ISO (PMID:21844891) RGD PMID:21844891 NCBI chr 4:80,612,648...80,677,005
Ensembl chr 4:80,612,669...80,676,996
JBrowse link
G Spag5 sperm associated antigen 5 involved_in ISO (PMID:26297806) RGD PMID:26297806 NCBI chr10:63,198,717...63,216,746
Ensembl chr10:63,198,768...63,216,745
JBrowse link
G Stil STIL, centriolar assembly protein involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(PMID:22349705)
RGD PMID:22349705 PMID:21873635 RGD:13792537 NCBI chr 5:128,520,837...128,573,732
Ensembl chr 5:128,520,953...128,573,730
JBrowse link
protein localization to meiotic spindle midzone term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ttk Ttk protein kinase acts_upstream_of_or_within ISO MGI:5056148 (MGI:5049806|PMID:21558374) RGD PMID:21558374 MGI:5049806 NCBI chr 8:84,754,329...84,792,653
Ensembl chr 8:84,754,315...84,792,651
JBrowse link
protein localization to microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Champ1 chromosome alignment maintaining phosphoprotein 1 involved_in IBA
ISO
PMID:21873635
(PMID:21063390)
RGD PMID:21063390 PMID:21873635 RGD:13792537 NCBI chr16:75,733,958...75,744,977
Ensembl chr16:75,733,805...75,744,984
JBrowse link
G Cript CXXC repeat containing interactor of PDZ3 domain involved_in IMP PMID:10570482 UniProt PMID:10570482 RGD:8554363 NCBI chr 6:7,581,428...7,589,384
Ensembl chr 6:7,580,703...7,589,399
JBrowse link
G Diaph1 diaphanous-related formin 1 involved_in ISO (PMID:15123714) RGD PMID:15123714 NCBI chr18:29,669,659...29,769,044
Ensembl chr18:29,669,659...29,769,172
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 acts_upstream_of_or_within ISO MGI:1861437 (MGI:3806438|PMID:18716223) RGD PMID:18716223 MGI:3806438 NCBI chr 5:166,456,989...166,468,733
Ensembl chr 5:166,456,686...166,468,664
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta acts_upstream_of_or_within ISO MGI:94941 (MGI:3806438|PMID:18716223) RGD PMID:18716223 MGI:3806438 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
JBrowse link
G Kif20b kinesin family member 20B involved_in ISO (MGI:5505333|PMID:23864681) RGD PMID:23864681 MGI:5505333 NCBI chr 1:232,428,293...232,483,798
Ensembl chr 1:232,428,371...232,483,787
JBrowse link
G Mapre1 microtubule-associated protein, RP/EB family, member 1 involved_in
acts_upstream_of_or_within
ISO
ISS
(PMID:19632184), (PMID:21820309)
(MGI:3611941|PMID:16247022)
GO_REF:0000024
RGD
UniProt
PMID:16247022 PMID:19632184 PMID:21820309 GO_REF:0000024 MGI:3611941 NCBI chr 3:142,218,846...142,246,990
Ensembl chr 3:142,212,955...142,246,983
JBrowse link
G Mid1 midline 1 involved_in ISO (PMID:11806752) RGD PMID:11806752 NCBI chr  X:24,116,674...24,491,205
Ensembl chr  X:24,120,293...24,248,353
JBrowse link
G Mid2 midline 2 involved_in ISO (PMID:11806752) RGD PMID:11806752 NCBI chr  X:104,354,692...104,456,757
Ensembl chr  X:104,355,316...104,453,473
JBrowse link
protein localization to microtubule plus-end term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gas2l1 growth arrest-specific 2 like 1 involved_in ISO
IBA
(PMID:24706950)
PMID:21873635
RGD PMID:24706950 PMID:21873635 RGD:13792537 NCBI chr14:79,951,702...79,961,830
Ensembl chr14:79,950,555...79,961,438
JBrowse link
G Gas2l2 growth arrest-specific 2 like 2 involved_in ISO
IBA
(PMID:24706950)
PMID:21873635
RGD PMID:24706950 PMID:21873635 RGD:13792537 NCBI chr10:68,222,475...68,229,877
Ensembl chr10:68,222,475...68,229,881
JBrowse link
G Mapre1 microtubule-associated protein, RP/EB family, member 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:142,218,846...142,246,990
Ensembl chr 3:142,212,955...142,246,983
JBrowse link
G Mapre2 microtubule-associated protein, RP/EB family, member 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:15,028,675...15,169,553
Ensembl chr18:15,029,041...15,168,044
JBrowse link
G Mapre3 microtubule-associated protein, RP/EB family, member 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:25,513,800...25,558,876
Ensembl chr 6:25,513,800...25,558,881
JBrowse link
protein localization to mitotic spindle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fam83d family with sequence similarity 83, member D involved_in IBA
ISO
PMID:21873635
(PMID:18485706)
RGD PMID:18485706 PMID:21873635 RGD:13792537 NCBI chr 3:147,421,941...147,441,211
Ensembl chr 3:147,421,908...147,441,192
JBrowse link
protein localization to mitotic spindle pole body term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wrap73 WD repeat containing, antisense to TP73 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:164,706,112...164,721,645
Ensembl chr 5:164,706,163...164,721,643
JBrowse link
protein localization to pericentriolar material term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Golgb1 golgin B1 involved_in ISO (PMID:25205765) RGD PMID:25205765 NCBI chr11:63,843,179...63,900,665
Ensembl chr11:63,843,986...63,900,770
JBrowse link
G Nudcd3 NudC domain containing 3 involved_in ISO (PMID:25205765) RGD PMID:25205765 NCBI chr14:80,975,417...81,059,183
Ensembl chr14:80,976,328...81,058,962
JBrowse link
protein localization to spindle microtubule term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hnrnpu heterogeneous nuclear ribonucleoprotein U involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:21242313)
Ensembl
UniProt
RGD
PMID:21242313 GO_REF:0000024 GO_REF:0000107 NCBI chr13:90,069,058...90,086,905
Ensembl chr13:90,074,181...90,086,588
JBrowse link
regulation of protein localization to centrosome term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cep72 centrosomal protein 72 involved_in ISO (PMID:26297806) RGD PMID:26297806 NCBI chr 1:29,225,312...29,255,294
Ensembl chr 1:29,225,361...29,255,271
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19512
    localization 6512
      macromolecule localization 3048
        protein localization 2588
          cellular protein localization 1832
            protein localization to organelle 953
              protein localization to cytoskeleton 61
                chromosome passenger complex localization to spindle midzone 1
                protein localization to actin cytoskeleton + 1
                protein localization to eisosome filament 0
                protein localization to microtubule cytoskeleton + 57
                protein localization to septin ring 0
paths to the root