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ONTOLOGY REPORT - ANNOTATIONS

Term:calyx of Held
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Accession:GO:0044305 term browser browse the term
Definition:The terminal specialization of a calyciferous axon which forms large synapses in the mammalian auditory central nervous system.
Synonyms:xref: NIF_Subcellular:sao1684283879
 never_in_taxon: NCBITaxon:8782 ! Aves


show annotations for term's descendants           Sort by:
calyx of Held term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aak1 AP2 associated kinase 1 is_active_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 6:86,826,252...86,980,209
Ensembl chr 6:86,826,499...86,980,205 		JBrowse link
G Actb actin, beta is_active_in IDA
IMP		 (PMID:27840001) SynGO PMID:27840001 NCBI chr 5:142,888,870...142,892,509
Ensembl chr 5:142,888,870...142,892,509 		JBrowse link
G Actg1 actin, gamma, cytoplasmic 1 is_active_in IMP
IDA		 (PMID:27840001) SynGO PMID:27840001 NCBI chr11:120,236,513...120,239,321
Ensembl chr11:120,236,516...120,239,368 		JBrowse link
G Adora1 adenosine A1 receptor is_active_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 1:134,126,953...134,163,195
Ensembl chr 1:134,126,963...134,163,169 		JBrowse link
G Atp1a3 ATPase, Na+/K+ transporting, alpha 3 polypeptide is_active_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 7:24,677,592...24,705,338
Ensembl chr 7:24,677,592...24,705,383 		JBrowse link
G Calb1 calbindin 1 is_active_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 4:15,881,264...15,906,709
Ensembl chr 4:15,881,264...15,908,064 		JBrowse link
G Calm1 calmodulin 1 is_active_in NAS
IMP
IDA		 (PMID:31628181) SynGO PMID:31628181 NCBI chr12:100,165,694...100,176,083
Ensembl chr12:100,165,694...100,176,073 		JBrowse link
G Calm2 calmodulin 2 is_active_in IDA
IMP		 (PMID:31628181) SynGO PMID:31628181 NCBI chr17:87,740,829...87,754,363
Ensembl chr17:87,740,840...87,754,363 		JBrowse link
G Calm3 calmodulin 3 is_active_in IDA
NAS
IMP		 (PMID:31628181) SynGO PMID:31628181 NCBI chr 7:16,649,304...16,657,957
Ensembl chr 7:16,649,304...16,658,039 		JBrowse link
G Cplx1 complexin 1 is_active_in IDA (PMID:26019341) SynGO PMID:26019341 NCBI chr 5:108,666,420...108,697,893
Ensembl chr 5:108,666,420...108,697,890 		JBrowse link
G Cplx2 complexin 2 is_active_in IDA (PMID:26019341) SynGO PMID:26019341 NCBI chr13:54,455,447...54,531,736
Ensembl chr13:54,519,162...54,531,730
Ensembl chr13:54,519,162...54,531,730 		JBrowse link
G Git1 GIT ArfGAP 1 is_active_in IMP
IDA		 (PMID:26637799) SynGO PMID:26637799 NCBI chr11:77,384,114...77,398,600
Ensembl chr11:77,384,388...77,398,612 		JBrowse link
G Git2 GIT ArfGAP 2 is_active_in IDA
IMP		 (PMID:26637799) SynGO PMID:26637799 NCBI chr 5:114,865,469...114,912,647
Ensembl chr 5:114,865,468...114,913,578 		JBrowse link
G Glra1 glycine receptor, alpha 1 subunit is_active_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr11:55,405,065...55,499,024
Ensembl chr11:55,405,064...55,499,024 		JBrowse link
G Htr1b 5-hydroxytryptamine (serotonin) receptor 1B is_active_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 9:81,510,344...81,515,885
Ensembl chr 9:81,510,344...81,515,881 		JBrowse link
G Itsn1 intersectin 1 (SH3 domain protein 1A) located_in
is_active_in		 IC
IDA		 (MGI:5492178|PMID:23633571)
(PMID:23633571)		 GOC
SynGO		 PMID:23633571 MGI:5492178 NCBI chr16:91,526,198...91,717,479
Ensembl chr16:91,526,169...91,717,485 		JBrowse link
G Kcna1 potassium voltage-gated channel, shaker-related subfamily, member 1 is_active_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 6:126,613,426...126,622,764
Ensembl chr 6:126,617,360...126,623,347 		JBrowse link
G Kcna2 potassium voltage-gated channel, shaker-related subfamily, member 2 is_active_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 3:106,998,203...107,022,321
Ensembl chr 3:107,008,462...107,022,321 		JBrowse link
G Kcna3 potassium voltage-gated channel, shaker-related subfamily, member 3 is_active_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 3:106,943,486...106,947,223
Ensembl chr 3:106,943,485...106,945,386 		JBrowse link
G Kcnc1 potassium voltage gated channel, Shaw-related subfamily, member 1 is_active_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 7:46,045,643...46,088,130
Ensembl chr 7:46,045,921...46,088,128 		JBrowse link
G Kcnc3 potassium voltage gated channel, Shaw-related subfamily, member 3 is_active_in IDA
IMP		 (PMID:33508244) SynGO PMID:33508244 NCBI chr 7:44,236,405...44,254,175
Ensembl chr 7:44,240,088...44,254,178 		JBrowse link
G Kcnc4 potassium voltage gated channel, Shaw-related subfamily, member 4 is_active_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 3:107,345,614...107,367,617
Ensembl chr 3:107,345,619...107,366,868 		JBrowse link
G Kcnk2 potassium channel, subfamily K, member 2 located_in ISO MGI
RGD		 PMID:15261098 GO_REF:0000096 MGI:4417868 RGD:9831118 NCBI chr 1:188,940,127...189,134,951
Ensembl chr 1:188,940,127...189,134,470 		JBrowse link
G Kcnq5 potassium voltage-gated channel, subfamily Q, member 5 is_active_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 1:21,468,623...22,032,874
Ensembl chr 1:21,468,627...22,032,166 		JBrowse link
G Ncs1 neuronal calcium sensor 1 is_active_in ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 2:31,135,766...31,186,001
Ensembl chr 2:31,135,835...31,186,001 		JBrowse link
G Nos1 nitric oxide synthase 1, neuronal is_active_in IMP
IDA		 (PMID:19038221) SynGO PMID:19038221 NCBI chr 5:118,004,904...118,096,905
Ensembl chr 5:117,919,097...118,096,905 		JBrowse link
G Prkca protein kinase C, alpha is_active_in IMP
IDA		 (PMID:21658591) SynGO PMID:21658591 NCBI chr11:107,824,213...108,237,360
Ensembl chr11:107,824,213...108,234,754 		JBrowse link
G Prkcb protein kinase C, beta is_active_in IDA
IMP		 (PMID:21658591) SynGO PMID:21658591 NCBI chr 7:121,888,327...122,233,625
Ensembl chr 7:121,887,974...122,233,625 		JBrowse link
G Prkcg protein kinase C, gamma located_in
is_active_in		 IC
IDA
IMP		 (MGI:5637456|PMID:24794094)
(PMID:24794094)		 GOC
SynGO		 PMID:24794094 MGI:5637456 NCBI chr 7:3,352,038...3,379,615
Ensembl chr 7:3,337,704...3,379,615 		JBrowse link
G Rimbp2 RIMS binding protein 2 is_active_in IDA
IMP		 (PMID:26402606), (PMID:29967030) SynGO PMID:26402606 PMID:29967030 NCBI chr 5:128,834,852...129,030,636
Ensembl chr 5:128,834,855...129,030,550 		JBrowse link
G Septin5 septin 5 is_active_in IDA
IMP		 (PMID:20624595) SynGO PMID:20624595 NCBI chr16:18,440,561...18,448,688
Ensembl chr16:18,439,252...18,448,704 		JBrowse link
G Tprg1l transformation related protein 63 regulated 1 like located_in
is_active_in		 ISO MGI GO_REF:0000096 MGI:4417868 NCBI chr 4:154,241,942...154,246,763
Ensembl chr 4:154,241,942...154,245,123 		JBrowse link
G Tspoap1 TSPO associated protein 1 is_active_in IDA
IMP		 (PMID:26402606) SynGO PMID:26402606 NCBI chr11:87,649,022...87,676,754
Ensembl chr11:87,651,367...87,676,754 		JBrowse link
G Unc13a unc-13 homolog A is_active_in IDA (PMID:23658173) SynGO PMID:23658173 NCBI chr 8:72,079,356...72,124,418
Ensembl chr 8:72,077,061...72,124,401 		JBrowse link
G Unc13b unc-13 homolog B is_active_in IDA (PMID:23658173) SynGO PMID:23658173 NCBI chr 4:43,046,193...43,264,873
Ensembl chr 4:43,058,953...43,264,871 		JBrowse link
G Unc13c unc-13 homolog C is_active_in IDA (PMID:23658173) SynGO PMID:23658173 NCBI chr 9:73,386,704...73,915,421
Ensembl chr 9:73,386,704...73,876,248 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 28583
    cellular anatomical entity 19615
      presynapse 807
        axon terminus 206
          calyx of Held 36
Path 2
Term Annotations click to browse term
  cellular_component 28583
    cellular anatomical entity 19615
      cell projection 2718
        plasma membrane bounded cell projection 2464
          neuron projection 1521
            axon 765
              distal axon 398
                axon terminus 206
                  calyx of Held 36
paths to the root