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ONTOLOGY REPORT - ANNOTATIONS


Term:small molecule catabolic process
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Accession:GO:0044282 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of small molecules, any low molecular weight, monomeric, non-encoded molecule.
Comment:Small molecules in GO include monosaccharides but exclude disaccharides and polysaccharides.
Synonyms:exact_synonym: small molecule catabolism


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4-hydroxyproline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoga1 4-hydroxy-2-oxoglutarate aldolase 1 involved_in ISO (PMID:21998747) BHF-UCL PMID:21998747 NCBI chrNW_004936636:2,101,184...2,125,377 JBrowse link
adenosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within
involved_in
ISO (MGI:2151677|PMID:11591798), (MGI:3531253|PMID:8663040)
(MGI:4835158|PMID:8672487), (MGI:6478540|PMID:16742956), (MGI:6478860|PMID:8064675)
(PMID:8894685)
(PMID:16670267)
(MGI:1861066|PMID:10899903), (MGI:2155238|PMID:9478961), (MGI:3525377|PMID:15630442), (MGI:3619310|PMID:14607964), (MGI:3640719|PMID:10720488), (MGI:3664521|PMID:16841096), (MGI:3794903|PMID:18340377)
(MGI:74163|PMID:7670465)
(MGI:1095761|PMID:9272950), (MGI:72798|PMID:7731963)
(MGI:1095761|PMID:9272950), (MGI:3531253|PMID:8663040), (MGI:3808984|PMID:2015347), (MGI:49990|PMID:1618849), (MGI:59127|PMID:2387582), (MGI:76875|PMID:7592575), (MGI:83255|PMID:8894685)
MGI
UniProt
PMID:1618849 PMID:2015347 PMID:2387582 PMID:7592575 PMID:7670465 More... MGI:1095761 MGI:1861066 MGI:2151677 MGI:2155238 MGI:3525377 MGI:3531253 MGI:3619310 MGI:3640719 MGI:3664521 MGI:3794903 MGI:3808984 MGI:4835158 MGI:49990 MGI:59127 MGI:6478540 MGI:6478860 MGI:72798 MGI:74163 MGI:76875 MGI:83255 NCBI chrNW_004936530:2,217,713...2,224,070 JBrowse link
G Ada2 adenosine deaminase 2 involved_in ISO (PMID:20147294) UniProt PMID:20147294 NCBI chrNW_004936807:232,851...262,593 JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in ISO (MGI:3665448|PMID:16462750) MGI PMID:16462750 MGI:3665448 NCBI chrNW_004936472:23,151,674...23,161,292 JBrowse link
G Xdh xanthine dehydrogenase involved_in ISO (MGI:49329|PMID:1590774), (MGI:6478097|PMID:29895374), (MGI:6478533|PMID:8226898)
(PMID:1619276)
(MGI:2447927|PMID:12502743)
(MGI:6306257|PMID:30936145)
MGI PMID:1590774 PMID:1619276 PMID:8226898 PMID:12502743 PMID:29895374 More... MGI:2447927 MGI:49329 MGI:6306257 MGI:6478097 MGI:6478533 NCBI chrNW_004936493:1,762,814...1,824,501 JBrowse link
arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddah1 dimethylarginine dimethylaminohydrolase 1 involved_in ISO (PMID:24895913) BHF-UCL PMID:24895913 NCBI chrNW_004936608:262,653...397,753 JBrowse link
G Fah fumarylacetoacetate hydrolase acts_upstream_of_or_within ISO (MGI:1929783|PMID:11209059) MGI PMID:11209059 MGI:1929783 NCBI chrNW_004936471:38,140,324...38,174,472 JBrowse link
G Nos1 nitric oxide synthase 1 involved_in ISO PMID:1383204 BHF-UCL PMID:1383204 RGD:8553334 NCBI chrNW_004936558:5,162,471...5,302,488 JBrowse link
G Nos2 nitric oxide synthase 2 involved_in ISO (PMID:7504305)
(MGI:3807772|PMID:1383204)
BHF-UCL PMID:1383204 PMID:7504305 MGI:3807772 NCBI chrNW_004936538:4,052,277...4,097,051 JBrowse link
G Nos3 nitric oxide synthase 3 involved_in ISO (PMID:1378832), (PMID:7488039) BHF-UCL PMID:1378832 PMID:7488039 NCBI chrNW_004936527:6,427,147...6,445,770 JBrowse link
arginine catabolic process to ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg2 arginase 2 ISO RGD PMID:15753084 RGD:8693655 NCBI chrNW_004936495:11,004,296...11,045,467 JBrowse link
asparagine catabolic process via L-aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asrgl1 asparaginase and isoaspartyl peptidase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:19839645)
PMID:12753071
UniProt
MGI
PMID:12753071 PMID:19839645 RGD:1299508 NCBI chrNW_004936581:823,665...847,579 JBrowse link
aspartate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddo D-aspartate oxidase involved_in ISO (PMID:9163533) UniProt PMID:9163533 NCBI chrNW_004936564:6,280,890...6,299,838 JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1 involved_in ISO (PMID:2241899) UniProt PMID:2241899 NCBI chrNW_004936636:617,376...640,424 JBrowse link
beta-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh6a1 aldehyde dehydrogenase 6 family member A1 ISO RGD PMID:2768248 RGD:1599052 NCBI chrNW_004936488:3,320,357...3,340,463 JBrowse link
branched-chain amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcat1 branched chain amino acid transaminase 1 acts_upstream_of_or_within ISO (MGI:3027291|PMID:14755340) MGI PMID:14755340 MGI:3027291 NCBI chrNW_004936548:2,385,756...2,454,423 JBrowse link
G Bcat2 branched chain amino acid transaminase 2 acts_upstream_of_or_within ISO (MGI:3027291|PMID:14755340) RGD
MGI
PMID:11733007 PMID:14755340 MGI:3027291 RGD:1582175 NCBI chrNW_004936664:2,865,804...2,890,038 JBrowse link
G Bckdha branched chain keto acid dehydrogenase E1 subunit alpha involved_in ISO (PMID:7883996) HGNC-UCL PMID:7883996 NCBI chrNW_004936661:3,799,998...3,817,560 JBrowse link
G Bckdhb branched chain keto acid dehydrogenase E1 subunit beta involved_in ISO (PMID:2022752) HGNC-UCL PMID:2022752 NCBI chrNW_004936510:9,904,703...10,081,532 JBrowse link
G Bckdk branched chain keto acid dehydrogenase kinase involved_in ISO PMID:1377677 HGNC-UCL PMID:1377677 RGD:68712 NCBI chrNW_004936501:13,467,603...13,471,810 JBrowse link
G Ivd isovaleryl-CoA dehydrogenase involved_in ISO (PMID:7640268) UniProt PMID:7640268 NCBI chrNW_004936471:3,871,152...3,883,521 JBrowse link
G Slc25a44 solute carrier family 25 member 44 involved_in ISO (PMID:31435015)
(MGI:6359503|PMID:31435015)
UniProt PMID:31435015 MGI:6359503 NCBI chrNW_004936580:5,435,841...5,454,396 JBrowse link
butyrate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acads acyl-CoA dehydrogenase short chain ISO RGD PMID:3968063 RGD:2317678 NCBI chrNW_004936668:257,214...272,089 JBrowse link
butyryl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt19 nudix hydrolase 19 involved_in ISO (MGI:6157214|PMID:29378847) UniProt PMID:29378847 MGI:6157214 NCBI chrNW_004936570:3,018,465...3,026,763 JBrowse link
G Nudt7 nudix hydrolase 7 involved_in ISO (MGI:6157214|PMID:29378847), (MGI:6450264|PMID:18799520) UniProt PMID:18799520 PMID:29378847 MGI:6157214 MGI:6450264 NCBI chrNW_004936475:26,079,298...26,095,466 JBrowse link
canonical glycolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eno1 enolase 1 involved_in ISO (PMID:3529090)
PMID:15041191
(PMID:29775581)
CAFA
UniProt
PMID:3529090 PMID:15041191 PMID:29775581 RGD:2302788 NCBI chrNW_004936623:3,115,357...3,130,289 JBrowse link
G Eno2 enolase 2 involved_in ISO PMID:15041191 CAFA PMID:15041191 RGD:2302788 NCBI chrNW_004936709:904,647...913,445 JBrowse link
G Foxk1 forkhead box K1 acts_upstream_of ISO (PMID:30700909) UniProt PMID:30700909 NCBI chrNW_004936765:1,126,168...1,255,354 JBrowse link
G Foxk2 forkhead box K2 acts_upstream_of ISO (MGI:6281052|PMID:30700909) UniProt PMID:30700909 MGI:6281052 NCBI chrNW_004936923:109,973...166,952 JBrowse link
G Pfkm phosphofructokinase, muscle acts_upstream_of_or_within ISO (MGI:4356361|PMID:19696889) MGI PMID:19696889 MGI:4356361 NCBI chrNW_004936512:6,006,247...6,031,939 JBrowse link
carboxylic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pon1 paraoxonase 1 involved_in ISO (PMID:7638166) BHF-UCL PMID:7638166 NCBI chrNW_004936585:4,954,871...4,979,560 JBrowse link
G Pon3 paraoxonase 3 involved_in ISO (PMID:15772423) BHF-UCL PMID:15772423 NCBI chrNW_004936585:4,902,430...4,928,377 JBrowse link
cholesterol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1d1 aldo-keto reductase family 1 member D1 involved_in ISO (PMID:7508385) UniProt PMID:7508385 NCBI chrNW_004936592:2,486,219...2,522,796 JBrowse link
G Apoe apolipoprotein E acts_upstream_of_or_within ISO (MGI:1314982|PMID:9826706) MGI PMID:9826706 MGI:1314982 NCBI chrNW_004936706:1,512,438...1,516,805 JBrowse link
G Cel carboxyl ester lipase involved_in ISO (PMID:12031288) UniProt PMID:12031288 NCBI chrNW_004936487:19,463,219...19,472,029 JBrowse link
G Hsd3b7 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 ISO RGD PMID:16081591 RGD:1599972 NCBI chrNW_004936501:13,363,630...13,367,553 JBrowse link
G LOC101961079 cholesterol 24-hydroxylase involved_in ISO (PMID:14640697), (PMID:18621681), (PMID:25017465)
(MGI:1339884|PMID:10377398), (MGI:6393037|PMID:20193040)
UniProt PMID:10377398 PMID:14640697 PMID:18621681 PMID:20193040 PMID:25017465 MGI:1339884 MGI:6393037 NCBI chrNW_004936604:3,451,853...3,490,688 JBrowse link
G LOC101963150 sterol 26-hydroxylase, mitochondrial involved_in ISO (PMID:9660774) UniProt PMID:9660774 NCBI chrNW_004936569:1,213,700...1,250,181 JBrowse link
G LOC101970910 cytochrome P450 7A1 involved_in
acts_upstream_of_or_within
ISO PMID:1694852
(MGI:1933035|PMID:11279518), (MGI:3603484|PMID:15845870)
UniProt
MGI
PMID:1694852 PMID:11279518 PMID:15845870 MGI:1933035 MGI:3603484 RGD:70534 NCBI chrNW_004936496:4,599,138...4,605,653 JBrowse link
G LOC101972335 24-hydroxycholesterol 7-alpha-hydroxylase acts_upstream_of_or_within ISO (MGI:1859119|PMID:10748047) MGI PMID:10748047 MGI:1859119 NCBI chrNW_004936476:13,697,598...13,819,362 JBrowse link
G Mt3 metallothionein 3 involved_in ISO (MGI:4881636|PMID:20544854) UniProt PMID:20544854 MGI:4881636 NCBI chrNW_004936475:8,864,512...8,866,516 JBrowse link
G Scarb1 scavenger receptor class B member 1 acts_upstream_of_or_within ISO (MGI:1934548|PMID:11278646)
(MGI:3690692|PMID:10559220)
MGI PMID:10559220 PMID:11278646 MGI:1934548 MGI:3690692 NCBI chrNW_004936558:530,828...555,098 JBrowse link
cobalamin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cubn cubilin ISO RGD PMID:14576052 RGD:8554807 NCBI chrNW_004936520:10,140,784...10,410,082 JBrowse link
cytidine deamination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aicda activation induced cytidine deaminase involved_in ISO (MGI:2656023|PMID:12692563) UniProt PMID:12692563 MGI:2656023 NCBI chrNW_004936870:25,039...34,601 JBrowse link
G Cda cytidine deaminase involved_in ISO (PMID:9596658) RGD
UniProt
PMID:675715 PMID:9596658 RGD:2316616 NCBI chrNW_004936474:6,543,295...6,564,575 JBrowse link
G Cdadc1 cytidine and dCMP deaminase domain containing 1 involved_in ISO (PMID:26945630) UniProt PMID:26945630 NCBI chrNW_004936565:2,336,613...2,395,816 JBrowse link
D-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino acid oxidase involved_in ISO (PMID:16616139), (PMID:20603179)
(MGI:5442503|PMID:20603179)
UniProt PMID:16616139 PMID:20603179 MGI:5442503 NCBI chrNW_004936769:744,862...758,086 JBrowse link
D-amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddo D-aspartate oxidase involved_in ISO (PMID:20603179)
(MGI:5442503|PMID:20603179)
UniProt PMID:20603179 MGI:5442503 NCBI chrNW_004936564:6,280,890...6,299,838 JBrowse link
D-glucuronate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1a1 aldo-keto reductase family 1 member A1 involved_in
acts_upstream_of_or_within
ISO PMID:22820017
(MGI:3588122|PMID:15769935)
UniProt
MGI
PMID:15769935 PMID:22820017 MGI:3588122 RGD:13825440 NCBI chrNW_004936474:26,680,736...26,696,996 JBrowse link
D-ribose catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt5 nudix hydrolase 5 involved_in ISO (PMID:21389046) UniProt PMID:21389046 NCBI chrNW_004936484:3,148,955...3,169,527 JBrowse link
D-serine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino acid oxidase involved_in ISO (PMID:18544534) UniProt PMID:18544534 NCBI chrNW_004936769:744,862...758,086 JBrowse link
D-xylose catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhdh dihydrodiol dehydrogenase acts_upstream_of_or_within ISO (MGI:55366|PMID:6753830) MGI PMID:6753830 MGI:55366 NCBI chrNW_004936664:2,955,538...2,964,709 JBrowse link
deoxyadenosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within
involved_in
ISO (MGI:76875|PMID:7592575)
(MGI:3640719|PMID:10720488)
(MGI:1095761|PMID:9272950), (MGI:72798|PMID:7731963)
(MGI:74163|PMID:7670465)
(MGI:2155238|PMID:9478961), (MGI:3619310|PMID:14607964), (MGI:3640719|PMID:10720488)
MGI PMID:7592575 PMID:7670465 PMID:7731963 PMID:9272950 PMID:9478961 More... MGI:1095761 MGI:2155238 MGI:3619310 MGI:3640719 MGI:72798 MGI:74163 MGI:76875 NCBI chrNW_004936530:2,217,713...2,224,070 JBrowse link
G LOC101970144 purine nucleoside phosphorylase involved_in ISO (PMID:6771276) MGI PMID:6771276 NCBI chrNW_004936877:686,539...692,832 JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in ISO (MGI:3665448|PMID:16462750) MGI PMID:16462750 MGI:3665448 NCBI chrNW_004936472:23,151,674...23,161,292 JBrowse link
G Xdh xanthine dehydrogenase involved_in ISO (MGI:6478860|PMID:8064675) MGI PMID:8064675 MGI:6478860 NCBI chrNW_004936493:1,762,814...1,824,501 JBrowse link
deoxyguanosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gda guanine deaminase involved_in ISO (MGI:6478860|PMID:8064675) MGI PMID:8064675 MGI:6478860 NCBI chrNW_004936503:8,191,925...8,279,806 JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in ISO (MGI:3665448|PMID:16462750) MGI PMID:16462750 MGI:3665448 NCBI chrNW_004936472:23,151,674...23,161,292 JBrowse link
G Xdh xanthine dehydrogenase involved_in ISO (MGI:6306257|PMID:30936145), (MGI:6478097|PMID:29895374), (MGI:6478533|PMID:8226898) MGI PMID:8226898 PMID:29895374 PMID:30936145 MGI:6306257 MGI:6478097 MGI:6478533 NCBI chrNW_004936493:1,762,814...1,824,501 JBrowse link
deoxyinosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101970144 purine nucleoside phosphorylase involved_in ISO (PMID:6771276) MGI PMID:6771276 NCBI chrNW_004936877:686,539...692,832 JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in ISO (MGI:3665448|PMID:16462750) MGI PMID:16462750 MGI:3665448 NCBI chrNW_004936472:23,151,674...23,161,292 JBrowse link
G Xdh xanthine dehydrogenase involved_in ISO (MGI:6306257|PMID:30936145)
(PMID:1619276)
(MGI:49329|PMID:1590774), (MGI:6478097|PMID:29895374), (MGI:6478533|PMID:8226898)
(MGI:2447927|PMID:12502743)
MGI PMID:1590774 PMID:1619276 PMID:8226898 PMID:12502743 PMID:29895374 More... MGI:2447927 MGI:49329 MGI:6306257 MGI:6478097 MGI:6478533 NCBI chrNW_004936493:1,762,814...1,824,501 JBrowse link
deoxyribonucleoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dera deoxyribose-phosphate aldolase involved_in ISO (PMID:9226884) UniProt PMID:9226884 NCBI chrNW_004936587:1,555,534...1,665,217 JBrowse link
dibenzo-p-dioxin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101969148 cytochrome P450 1A1 ISO 2,3,7,8-tetrachlorodibenzo-p-dioxin RGD PMID:12914780 PMID:15812643 RGD:2306662 RGD:2306673 NCBI chrNW_004936471:33,682,730...33,688,332 JBrowse link
dicarboxylic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot4 acyl-CoA thioesterase 4 involved_in ISO (PMID:16141203) UniProt PMID:16141203 NCBI chrNW_004936488:2,912,016...2,914,995 JBrowse link
G Acot8 acyl-CoA thioesterase 8 involved_in ISO (PMID:16141203) UniProt PMID:16141203 NCBI chrNW_004936514:7,166,392...7,180,537 JBrowse link
ethanol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide acts_upstream_of_or_within ISO (MGI:1338643|PMID:10358022) MGI PMID:10358022 MGI:1338643 NCBI chrNW_004936520:3,467,003...3,489,754 JBrowse link
fatty acid alpha-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hacl1 2-hydroxyacyl-CoA lyase 1 involved_in ISO (PMID:10468558), (PMID:15644336), (PMID:21708296), (PMID:28289220)
(MGI:6105330|PMID:28629946)
HGNC-UCL
UniProt
PMID:10468558 PMID:15644336 PMID:21708296 PMID:28289220 PMID:28629946 MGI:6105330 RGD:708588 NCBI chrNW_004936473:2,823,183...2,856,077 JBrowse link
G Hao1 hydroxyacid oxidase 1 involved_in ISO (PMID:18215067) UniProt PMID:18215067 NCBI chrNW_004936485:11,435,151...11,486,042 JBrowse link
G Ilvbl ilvB acetolactate synthase like involved_in ISO (PMID:28289220) UniProt PMID:28289220 NCBI chrNW_004936596:5,343,895...5,352,804 JBrowse link
G Pex13 peroxisomal biogenesis factor 13 acts_upstream_of_or_within ISO (MGI:2670243|PMID:12897163) MGI PMID:12897163 MGI:2670243 NCBI chrNW_004936491:6,530,385...6,559,706 JBrowse link
G Slc27a2 solute carrier family 27 member 2 involved_in ISO (PMID:10198260) UniProt PMID:10198260 NCBI chrNW_004936471:12,259,779...12,298,760 JBrowse link
fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISO (PMID:23671276)
(MGI:5315378|PMID:10196381)
(PMID:18757502), (PMID:21145416)
(PMID:17542813), (PMID:9425230)
UniProt PMID:9425230 PMID:10196381 PMID:17542813 PMID:18757502 PMID:21145416 More... MGI:5315378 NCBI chrNW_004936809:615,133...634,618 JBrowse link
G Abcd2 ATP binding cassette subfamily D member 2 involved_in ISO (PMID:21145416)
(MGI:5315378|PMID:10196381)
UniProt PMID:10196381 PMID:21145416 MGI:5315378 NCBI chrNW_004936607:1,292,964...1,345,671 JBrowse link
G Abcd3 ATP binding cassette subfamily D member 3 involved_in ISO (PMID:9425230)
(PMID:24333844)
UniProt PMID:9425230 PMID:24333844 NCBI chrNW_004936537:4,659,685...4,745,992 JBrowse link
G Acaa2 acetyl-CoA acyltransferase 2 ISO RGD PMID:11879205 RGD:2317624 NCBI chrNW_004936497:13,242,644...13,269,007 JBrowse link
G Acadm acyl-CoA dehydrogenase medium chain involved_in ISO (PMID:2393404) UniProt PMID:2393404 NCBI chrNW_004936571:2,761,254...2,797,045 JBrowse link
G Acadvl acyl-CoA dehydrogenase very long chain ISO RGD PMID:8034667 RGD:631729 NCBI chrNW_004936595:514,883...520,223 JBrowse link
G Acox2 acyl-CoA oxidase 2 ISO RGD PMID:1400324 PMID:8654595 RGD:2299949 RGD:2299971 NCBI chrNW_004936473:2,494,568...2,525,956 JBrowse link
G Adipoq adiponectin, C1Q and collagen domain containing acts_upstream_of_or_within ISO (MGI:2387247|PMID:12151381) MGI PMID:12151381 MGI:2387247 NCBI chrNW_004936578:3,168,599...3,179,369 JBrowse link
G Bdh2 3-hydroxybutyrate dehydrogenase 2 involved_in ISO (PMID:16380372) HGNC-UCL PMID:16380372 NCBI chrNW_004936520:278,467...304,525 JBrowse link
G Cpt1a carnitine palmitoyltransferase 1A ISO RGD PMID:31901136 PMID:31953200 RGD:25823178 RGD:25823179 NCBI chrNW_004936599:1,491,934...1,535,101 JBrowse link
G Cpt2 carnitine palmitoyltransferase 2 involved_in ISO (PMID:20538056) RGD
UniProt
PMID:10380116 PMID:10796071 PMID:20538056 RGD:21410186 RGD:2326088 NCBI chrNW_004936522:7,858,172...7,875,679 JBrowse link
G Crot carnitine O-octanoyltransferase involved_in ISO (PMID:21619872) UniProt PMID:21619872 NCBI chrNW_004936763:1,425,394...1,462,638 JBrowse link
G Decr1 2,4-dienoyl-CoA reductase 1 involved_in ISO (PMID:15531764) UniProt PMID:15531764 NCBI chrNW_004936544:3,816,543...3,853,288 JBrowse link
G Echs1 enoyl-CoA hydratase, short chain 1 involved_in ISO (PMID:26251176) RGD
UniProt
PMID:12379132 PMID:26251176 RGD:2317616 NCBI chrNW_004936486:19,488,619...19,496,583 JBrowse link
G Eci1 enoyl-CoA delta isomerase 1 involved_in
acts_upstream_of_or_within
ISO PMID:11781327
(MGI:2180251|PMID:11916962)
UniProt
MGI
PMID:11781327 PMID:11916962 MGI:2180251 RGD:2306199 NCBI chrNW_004936694:1,794,673...1,807,306 JBrowse link
G Eci2 enoyl-CoA delta isomerase 2 ISO RGD PMID:11781327 RGD:2306199 NCBI chrNW_004936534:8,306,669...8,323,454 JBrowse link
G Hadh hydroxyacyl-CoA dehydrogenase involved_in ISO (PMID:2817332)
(PMID:11489939)
RGD
UniProt
PMID:2817332 PMID:11489939 PMID:17491019 RGD:2302227 NCBI chrNW_004936818:575,272...623,496 JBrowse link
G Hadha hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha acts_upstream_of_or_within ISO (MGI:2135592|PMID:11390422) RGD
MGI
PMID:1730633 PMID:11390422 MGI:2135592 RGD:1600572 NCBI chrNW_004936493:6,182,786...6,224,601 JBrowse link
G Hadhb hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta ISO RGD PMID:1730633 RGD:1600572 NCBI chrNW_004936493:6,139,717...6,182,792 JBrowse link
G Hsd17b10 hydroxysteroid 17-beta dehydrogenase 10 involved_in ISO (PMID:12917011) UniProt PMID:12917011 NCBI chrNW_004936751:399,743...402,200 JBrowse link
G Hsd17b4 hydroxysteroid 17-beta dehydrogenase 4 involved_in
acts_upstream_of_or_within
ISO (PMID:10400999), (PMID:10706581), (PMID:15060085), (PMID:9482850)
(MGI:3711634|PMID:17442273)
UniProt
MGI
PMID:9482850 PMID:10400999 PMID:10706581 PMID:15060085 PMID:17442273 MGI:3711634 NCBI chrNW_004936715:2,357,215...2,446,601 JBrowse link
G LOC101954746 peroxisomal bifunctional enzyme involved_in
acts_upstream_of_or_within
ISO (PMID:15060085)
(MGI:3711634|PMID:17442273)
PMID:11781327
PMID:12106015
UniProt
MGI
PMID:11781327 PMID:12106015 PMID:15060085 PMID:17442273 MGI:3711634 RGD:21201263 RGD:2306199 NCBI chrNW_004936578:4,554,164...4,666,427 JBrowse link
G LOC101968976 leptin acts_upstream_of_or_within ISO (MGI:5444071|PMID:22958918) MGI PMID:22958918 MGI:5444071 NCBI chrNW_004936479:15,394,966...15,411,334 JBrowse link
G Mtln mitoregulin involved_in ISO (PMID:32243843) UniProt PMID:32243843 NCBI chrNW_004943304:685...1,449 JBrowse link
G Pex2 peroxisomal biogenesis factor 2 involved_in ISO (PMID:10528859), (PMID:9765053) UniProt PMID:9765053 PMID:10528859 NCBI chrNW_004936702:1,573,616...1,626,323 JBrowse link
G Pex5 peroxisomal biogenesis factor 5 acts_upstream_of_or_within ISO (MGI:1096198|PMID:9288097)
(MGI:3711634|PMID:17442273)
MGI PMID:9288097 PMID:17442273 MGI:1096198 MGI:3711634 NCBI chrNW_004936709:587,296...606,085 JBrowse link
G Pex7 peroxisomal biogenesis factor 7 acts_upstream_of_or_within ISO (MGI:3052413|PMID:12915479) MGI PMID:12915479 MGI:3052413 NCBI chrNW_004936560:4,237,691...4,302,655 JBrowse link
G Scp2 sterol carrier protein 2 involved_in ISO PMID:9325339 UniProt PMID:9325339 RGD:21201257 NCBI chrNW_004936522:8,004,503...8,110,995 JBrowse link
G Sesn2 sestrin 2 acts_upstream_of_or_within ISO (MGI:5444071|PMID:22958918) MGI PMID:22958918 MGI:5444071 NCBI chrNW_004936474:12,416,652...12,436,799 JBrowse link
G Slc25a17 solute carrier family 25 member 17 involved_in ISO (PMID:12445829) BHF-UCL PMID:12445829 NCBI chrNW_004936492:1,015,121...1,066,802 JBrowse link
G Slc27a2 solute carrier family 27 member 2 involved_in ISO (PMID:10198260) UniProt PMID:10198260 NCBI chrNW_004936471:12,259,779...12,298,760 JBrowse link
fatty acid beta-oxidation using acyl-CoA dehydrogenase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acad11 acyl-CoA dehydrogenase family member 11 involved_in ISO (PMID:21237683) UniProt PMID:21237683 NCBI chrNW_004936529:5,915,241...5,997,230 JBrowse link
G Acadl acyl-CoA dehydrogenase long chain involved_in ISO (MGI:3526480|PMID:15639194) RGD
BHF-UCL
PMID:3968063 PMID:15639194 MGI:3526480 RGD:2317678 NCBI chrNW_004936845:66,674...96,248 JBrowse link
G Acadm acyl-CoA dehydrogenase medium chain involved_in ISO (MGI:4412440|PMID:18459129)
(PMID:1902818), (PMID:19224950), (PMID:25416781), (PMID:3597357)
(PMID:16972171)
RGD
BHF-UCL
PMID:1902818 PMID:3597357 PMID:3968063 PMID:16972171 PMID:18459129 More... MGI:4412440 RGD:2317678 NCBI chrNW_004936571:2,761,254...2,797,045 JBrowse link
G Acads acyl-CoA dehydrogenase short chain involved_in ISO (PMID:3597357) RGD
BHF-UCL
PMID:3597357 PMID:3968063 RGD:2317678 NCBI chrNW_004936668:257,214...272,089 JBrowse link
G Acadvl acyl-CoA dehydrogenase very long chain involved_in ISO (PMID:9599005)
(MGI:3526480|PMID:15639194)
(PMID:7668252)
UniProt
BHF-UCL
PMID:7668252 PMID:9599005 PMID:15639194 MGI:3526480 NCBI chrNW_004936595:514,883...520,223 JBrowse link
G Etfa electron transfer flavoprotein subunit alpha involved_in ISO (PMID:25416781) UniProt PMID:25416781 NCBI chrNW_004936471:35,868,851...35,942,662 JBrowse link
G Etfb electron transfer flavoprotein subunit beta involved_in ISO (PMID:25416781)
(MGI:5700285|PMID:25023281)
UniProt PMID:25023281 PMID:25416781 MGI:5700285 NCBI chrNW_004937378:26,164...31,470 JBrowse link
G Etfdh electron transfer flavoprotein dehydrogenase involved_in ISO (PMID:17412732) BHF-UCL PMID:17412732 NCBI chrNW_004936576:5,140,577...5,165,527 JBrowse link
G Gcdh glutaryl-CoA dehydrogenase involved_in ISO (PMID:25416781) UniProt PMID:25416781 NCBI chrNW_004936659:1,955,601...1,961,925 JBrowse link
G Ivd isovaleryl-CoA dehydrogenase involved_in ISO (PMID:3597357) BHF-UCL PMID:3597357 NCBI chrNW_004936471:3,871,152...3,883,521 JBrowse link
fatty acid beta-oxidation using acyl-CoA oxidase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acox1 acyl-CoA oxidase 1 involved_in ISO (PMID:18536048) RGD
BHF-UCL
PMID:1400324 PMID:18536048 RGD:2299949 NCBI chrNW_004936594:1,115,607...1,140,085 JBrowse link
G Acox2 acyl-CoA oxidase 2 involved_in ISO (PMID:27884763) UniProt PMID:27884763 NCBI chrNW_004936473:2,494,568...2,525,956 JBrowse link
G Acox3 acyl-CoA oxidase 3, pristanoyl ISO RGD PMID:1400324 PMID:8026493 PMID:8654595 RGD:2299949 RGD:2299969 RGD:2299971 NCBI chrNW_004936477:19,696,274...19,731,338 JBrowse link
G Crat carnitine O-acetyltransferase involved_in ISO (PMID:23485643) UniProt PMID:23485643 NCBI chrNW_004936487:16,523,571...16,537,242 JBrowse link
fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadl acyl-CoA dehydrogenase long chain acts_upstream_of_or_within ISO (MGI:5660099|PMID:21151927) MGI PMID:21151927 MGI:5660099 NCBI chrNW_004936845:66,674...96,248 JBrowse link
G Acadvl acyl-CoA dehydrogenase very long chain acts_upstream_of_or_within ISO (MGI:5660099|PMID:21151927) MGI PMID:21151927 MGI:5660099 NCBI chrNW_004936595:514,883...520,223 JBrowse link
G Acot7 acyl-CoA thioesterase 7 acts_upstream_of_or_within ISO (MGI:2158988|PMID:11834298) MGI PMID:11834298 MGI:2158988 NCBI chrNW_004936623:1,112,021...1,191,190 JBrowse link
G Acox1 acyl-CoA oxidase 1 involved_in ISO (PMID:32169171) UniProt PMID:32169171 NCBI chrNW_004936594:1,115,607...1,140,085 JBrowse link
G Eci2 enoyl-CoA delta isomerase 2 involved_in ISO (PMID:10419495) UniProt PMID:10419495 NCBI chrNW_004936534:8,306,669...8,323,454 JBrowse link
G Faah fatty acid amide hydrolase involved_in ISO (PMID:9122178) UniProt PMID:9122178 NCBI chrNW_004936474:27,419,211...27,441,061 JBrowse link
G LOC101968976 leptin ISO RGD PMID:12058043 RGD:625499 NCBI chrNW_004936479:15,394,966...15,411,334 JBrowse link
G Lpin1 lipin 1 involved_in ISO (MGI:3770090|PMID:16950137) UniProt PMID:16950137 MGI:3770090 NCBI chrNW_004936532:7,596,279...7,654,139 JBrowse link
folic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfs methenyltetrahydrofolate synthetase involved_in ISO (PMID:12764149) BHF-UCL PMID:12764149 NCBI chrNW_004936471:37,910,856...37,964,655 JBrowse link
galactose catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gale UDP-galactose-4-epimerase involved_in ISO (PMID:16302980) UniProt PMID:16302980 NCBI chrNW_004936474:8,949,814...8,954,269 JBrowse link
G Glb1 galactosidase beta 1 ISO RGD PMID:6811372 RGD:1598981 NCBI chrNW_004936473:23,348,431...23,440,271 JBrowse link
gamma-aminobutyric acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase involved_in ISO (PMID:11561735) UniProt PMID:11561735 NCBI chrNW_004936530:7,543,743...7,621,392 JBrowse link
G Aldh5a1 aldehyde dehydrogenase 5 family member A1 involved_in
acts_upstream_of_or_within
ISO (PMID:15037717)
(MGI:2151301|PMID:11544478), (MGI:3050939|PMID:15262267)
(PMID:9683595)
UniProt
MGI
PMID:9683595 PMID:11544478 PMID:15037717 PMID:15262267 MGI:2151301 MGI:3050939 NCBI chrNW_004936671:843,577...865,798 JBrowse link
glucose catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bad BCL2 associated agonist of cell death acts_upstream_of_or_within ISO (MGI:2671672|PMID:12931191) MGI PMID:12931191 MGI:2671672 NCBI chrNW_004936599:4,924,349...4,933,683 JBrowse link
G Lrp5 LDL receptor related protein 5 involved_in ISO (PMID:19673927) BHF-UCL PMID:19673927 NCBI chrNW_004936599:1,746,309...1,814,471 JBrowse link
G Pfkfb2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 ISO RGD PMID:16980436 RGD:2304071 NCBI chrNW_004936557:5,559,993...5,584,912 JBrowse link
glucose catabolic process to lactate via pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ldha lactate dehydrogenase A acts_upstream_of_or_within ISO (MGI:62497|PMID:8224816) MGI PMID:8224816 MGI:62497 NCBI chrNW_004936528:866,607...879,977 JBrowse link
glutamate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Glud1 glutamate dehydrogenase 1 involved_in ISO (PMID:11032875), (PMID:6121377) BHF-UCL PMID:6121377 PMID:11032875 NCBI chrNW_004936601:5,415,857...5,435,964 JBrowse link
glutamate catabolic process to 2-oxoglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 acts_upstream_of_or_within ISO (MGI:53641|PMID:4193185) RGD
MGI
PMID:4193185 PMID:16489927 MGI:53641 RGD:13504861 NCBI chrNW_004936636:617,376...640,424 JBrowse link
glutamate catabolic process to aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 acts_upstream_of_or_within ISO (MGI:53641|PMID:4193185) MGI PMID:4193185 MGI:53641 NCBI chrNW_004936636:617,376...640,424 JBrowse link
glutamate catabolic process via 2-oxoglutarate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adhfe1 alcohol dehydrogenase iron containing 1 involved_in ISO (PMID:16435184) UniProt PMID:16435184 NCBI chrNW_004936496:7,529,217...7,562,881 JBrowse link
glutamate decarboxylation to succinate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gad2 glutamate decarboxylase 2 ISO RGD PMID:8999827 RGD:1625237 NCBI chrNW_004936484:1,737,806...1,810,378 JBrowse link
glutamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gls glutaminase involved_in
acts_upstream_of_or_within
ISO (PMID:22049910)
(MGI:5320252|PMID:22228304)
(MGI:3623875|PMID:16641247)
UniProt
MGI
PMID:16641247 PMID:22049910 PMID:22228304 MGI:3623875 MGI:5320252 NCBI chrNW_004936506:7,237,099...7,314,011 JBrowse link
G Ppat phosphoribosyl pyrophosphate amidotransferase ISO RGD PMID:8463258 RGD:633710 NCBI chrNW_004936482:18,606,124...18,648,989 JBrowse link
glycine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gldc glycine decarboxylase involved_in ISO (PMID:28244183) UniProt PMID:28244183 NCBI chrNW_004936539:1,008,340...1,095,044 JBrowse link
glycine decarboxylation via glycine cleavage system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amt aminomethyltransferase involved_in ISO (PMID:16051266) UniProt PMID:16051266 NCBI chrNW_004936529:1,049,364...1,054,458 JBrowse link
G Gcsh glycine cleavage system protein H ISO RGD PMID:6402507 RGD:1598699 NCBI chrNW_004936475:28,749,545...28,760,242 JBrowse link
G Gldc glycine decarboxylase ISO RGD PMID:6778858 RGD:1642728 NCBI chrNW_004936539:1,008,340...1,095,044 JBrowse link
glycolate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hao1 hydroxyacid oxidase 1 involved_in ISO (PMID:18215067) UniProt PMID:18215067 NCBI chrNW_004936485:11,435,151...11,486,042 JBrowse link
glycolytic process from galactose term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Galk1 galactokinase 1 acts_upstream_of_or_within ISO (MGI:1861531|PMID:10915771) MGI PMID:10915771 MGI:1861531 NCBI chrNW_004936594:944,936...950,537 JBrowse link
G Galt galactose-1-phosphate uridylyltransferase acts_upstream_of_or_within ISO (MGI:2180189|PMID:11286504) MGI PMID:11286504 MGI:2180189 NCBI chrNW_004936524:2,726,795...2,730,049 JBrowse link
glyoxylate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt alanine--glyoxylate and serine--pyruvate aminotransferase involved_in ISO (PMID:22198249) UniProt PMID:22198249 NCBI chrNW_004936745:856,915...867,477 JBrowse link
G Agxt2 alanine--glyoxylate aminotransferase 2 involved_in ISO (PMID:20018850) BHF-UCL PMID:20018850 NCBI chrNW_004936518:6,508,928...6,544,324 JBrowse link
G Hoga1 4-hydroxy-2-oxoglutarate aldolase 1 involved_in ISO (PMID:20797690) UniProt PMID:20797690 NCBI chrNW_004936636:2,101,184...2,125,377 JBrowse link
histidine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hal histidine ammonia-lyase acts_upstream_of_or_within ISO (MGI:52899|PMID:8486363) MGI PMID:8486363 MGI:52899 NCBI chrNW_004936507:12,058,583...12,078,159 JBrowse link
G Hdc histidine decarboxylase involved_in
acts_upstream_of_or_within
ISO (PMID:22767596)
(MGI:2138019|PMID:11478947)
UniProt
MGI
PMID:11478947 PMID:22767596 MGI:2138019 NCBI chrNW_004936471:12,303,802...12,324,613 JBrowse link
G LOC101964451 urocanate hydratase involved_in ISO (PMID:19304569) BHF-UCL PMID:19304569 NCBI chrNW_004936898:583,802...600,305 JBrowse link
homocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta-synthase involved_in ISO (PMID:18776696), (PMID:24416422) BHF-UCL PMID:18776696 PMID:24416422 NCBI chrNW_004936500:976,043...1,003,559 JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase involved_in ISO (PMID:11466310) BHF-UCL PMID:11466310 NCBI chrNW_004936643:379,790...410,034 JBrowse link
inosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101970144 purine nucleoside phosphorylase involved_in
acts_upstream_of_or_within
ISO (PMID:23438750)
(PMID:16964310)
UniProt
MGI
PMID:16964310 PMID:23438750 NCBI chrNW_004936877:686,539...692,832 JBrowse link
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in ISO (MGI:3665448|PMID:16462750) MGI PMID:16462750 MGI:3665448 NCBI chrNW_004936472:23,151,674...23,161,292 JBrowse link
G Xdh xanthine dehydrogenase involved_in ISO (MGI:49329|PMID:1590774), (MGI:6478097|PMID:29895374), (MGI:6478533|PMID:8226898)
(PMID:1619276)
(MGI:2447927|PMID:12502743)
(MGI:6306257|PMID:30936145)
MGI PMID:1590774 PMID:1619276 PMID:8226898 PMID:12502743 PMID:29895374 More... MGI:2447927 MGI:49329 MGI:6306257 MGI:6478097 MGI:6478533 NCBI chrNW_004936493:1,762,814...1,824,501 JBrowse link
inositol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Miox myo-inositol oxygenase involved_in ISO (PMID:11716759)
(PMID:18364358)
UniProt PMID:11716759 PMID:18364358 NCBI chrNW_004936629:355,517...357,678 JBrowse link
inositol phosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ntsr1 neurotensin receptor 1 ISO RGD PMID:15707678 RGD:9743914 NCBI chrNW_004936514:10,240,990...10,272,859 JBrowse link
inositol phosphate dephosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Impa1 inositol monophosphatase 1 involved_in
acts_upstream_of_or_within
ISO PMID:9462881
(PMID:17068342)
(PMID:9462881)
UniProt
MGI
PMID:9462881 PMID:17068342 RGD:2302240 NCBI chrNW_004936656:2,598,454...2,616,643 JBrowse link
G Impa2 inositol monophosphatase 2 acts_upstream_of_or_within ISO (PMID:17068342) MGI PMID:17068342 NCBI chrNW_004936626:268,788...310,781 JBrowse link
G Inpp4b inositol polyphosphate-4-phosphatase type II B acts_upstream_of_or_within ISO PMID:9295334 MGI PMID:9295334 RGD:633135 NCBI chrNW_004936535:5,427,131...6,168,622 JBrowse link
G Inpp5a inositol polyphosphate-5-phosphatase A acts_upstream_of_or_within ISO (PMID:8006039) MGI PMID:8006039 NCBI chrNW_004936486:18,893,958...19,022,450 JBrowse link
G Inpp5e inositol polyphosphate-5-phosphatase E acts_upstream_of_or_within ISO (MGI:1861829|PMID:10806194) MGI PMID:10806194 MGI:1861829 NCBI chrNW_004936669:1,377,005...1,385,287 JBrowse link
G Inpp5k inositol polyphosphate-5-phosphatase K acts_upstream_of_or_within ISO (PMID:12536145) MGI PMID:12536145 NCBI chrNW_004936538:7,641,485...7,662,033 JBrowse link
G Mtmr2 myotubularin related protein 2 acts_upstream_of_or_within ISO (MGI:3619505|PMID:16399794) MGI PMID:16399794 MGI:3619505 NCBI chrNW_004936700:1,790,592...1,873,019 JBrowse link
G Mtmr7 myotubularin related protein 7 acts_upstream_of_or_within ISO (MGI:2673068|PMID:12890864) MGI PMID:12890864 MGI:2673068 NCBI chrNW_004936573:6,346,106...6,434,697 JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:9593664) UniProt PMID:9593664 NCBI chrNW_004936735:1,252,414...1,338,318 JBrowse link
G Synj1 synaptojanin 1 acts_upstream_of_or_within ISO (MGI:1346710|PMID:10535736) MGI PMID:10535736 MGI:1346710 NCBI chrNW_004936500:9,484,571...9,565,980 JBrowse link
G Synj2 synaptojanin 2 ISO RGD PMID:9388224 RGD:69390 NCBI chrNW_004936489:9,848,070...9,911,952 JBrowse link
isoleucine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadsb acyl-CoA dehydrogenase short/branched chain involved_in ISO (PMID:11013134) UniProt PMID:11013134 NCBI chrNW_004936486:11,668,099...11,707,946 JBrowse link
G Acat1 acetyl-CoA acetyltransferase 1 involved_in ISO (PMID:1979337), (PMID:8103405) BHF-UCL PMID:1979337 PMID:8103405 NCBI chrNW_004936551:594,647...626,016 JBrowse link
G Bcat2 branched chain amino acid transaminase 2 acts_upstream_of_or_within ISO (MGI:3770498|PMID:17767905) RGD
MGI
PMID:11733007 PMID:17767905 MGI:3770498 RGD:1582175 NCBI chrNW_004936664:2,865,804...2,890,038 JBrowse link
G Bckdk branched chain keto acid dehydrogenase kinase ISO RGD PMID:27472223 RGD:39131293 NCBI chrNW_004936501:13,467,603...13,471,810 JBrowse link
G Hsd17b10 hydroxysteroid 17-beta dehydrogenase 10 involved_in ISO (PMID:18996107), (PMID:19706438) UniProt PMID:18996107 PMID:19706438 NCBI chrNW_004936751:399,743...402,200 JBrowse link
ketone body catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 involved_in ISO (PMID:1979337) BHF-UCL PMID:1979337 NCBI chrNW_004936551:594,647...626,016 JBrowse link
G Acat2 acetyl-CoA acetyltransferase 2 ISO RGD PMID:5116556 RGD:2326095 NCBI chrNW_004936489:11,255,871...11,273,848 JBrowse link
G Oxct1 3-oxoacid CoA-transferase 1 acts_upstream_of_or_within ISO (MGI:4946851|PMID:21209089) MGI PMID:21209089 MGI:4946851 NCBI chrNW_004936518:924,840...1,057,201 JBrowse link
ketone catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oxct1 3-oxoacid CoA-transferase 1 acts_upstream_of_or_within ISO (MGI:4946851|PMID:21209089) MGI PMID:21209089 MGI:4946851 NCBI chrNW_004936518:924,840...1,057,201 JBrowse link
L-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt alanine--glyoxylate and serine--pyruvate aminotransferase involved_in ISO (PMID:17696873), (PMID:18492492), (PMID:22198249) UniProt PMID:17696873 PMID:18492492 PMID:22198249 NCBI chrNW_004936745:856,915...867,477 JBrowse link
L-alanine catabolic process, by transamination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt2 alanine--glyoxylate aminotransferase 2 involved_in ISO (PMID:20018850) BHF-UCL PMID:20018850 NCBI chrNW_004936518:6,508,928...6,544,324 JBrowse link
L-cysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt alanine--glyoxylate and serine--pyruvate aminotransferase involved_in ISO (PMID:18492492) UniProt PMID:18492492 NCBI chrNW_004936745:856,915...867,477 JBrowse link
G Cbs cystathionine beta-synthase involved_in ISO (PMID:15520012) UniProt PMID:15520012 NCBI chrNW_004936500:976,043...1,003,559 JBrowse link
G Cdo1 cysteine dioxygenase type 1 ISO RGD PMID:16611641 RGD:2301357 NCBI chrNW_004936742:981,863...993,271 JBrowse link
L-cysteine catabolic process to hypotaurine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csad cysteine sulfinic acid decarboxylase involved_in ISO PMID:9635011 UniProt PMID:9635011 RGD:13800536 NCBI chrNW_004936512:10,447,457...10,475,231 JBrowse link
L-cysteine catabolic process to taurine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Csad cysteine sulfinic acid decarboxylase involved_in ISO PMID:9635011 UniProt PMID:9635011 RGD:13800536 NCBI chrNW_004936512:10,447,457...10,475,231 JBrowse link
L-lysine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aass aminoadipate-semialdehyde synthase acts_upstream_of_or_within ISO (MGI:1350812|PMID:10567240) MGI PMID:10567240 MGI:1350812 NCBI chrNW_004936605:3,135,977...3,190,956 JBrowse link
L-lysine catabolic process to acetyl-CoA via L-pipecolate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pipox pipecolic acid and sarcosine oxidase involved_in ISO (PMID:10642506) UniProt PMID:10642506 NCBI chrNW_004936538:5,218,097...5,252,579 JBrowse link
L-phenylalanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il4i1 interleukin 4 induced 1 involved_in ISO (PMID:17356132), (PMID:25767141) UniProt PMID:17356132 PMID:25767141 NCBI chrNW_004936664:3,674,612...3,715,036 JBrowse link
G Qdpr quinoid dihydropteridine reductase ISO RGD PMID:4155291 RGD:5128604 NCBI chrNW_004936477:10,687,328...10,708,015 JBrowse link
L-serine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta-synthase involved_in ISO (PMID:18776696) UniProt PMID:18776696 NCBI chrNW_004936500:976,043...1,003,559 JBrowse link
G Sds serine dehydratase involved_in ISO (PMID:15689518), (PMID:18342636) UniProt PMID:15689518 PMID:18342636 NCBI chrNW_004936668:3,208,810...3,213,465 JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 involved_in ISO (PMID:17482557) UniProt PMID:17482557 NCBI chrNW_004936741:1,849,239...1,877,724 JBrowse link
L-xylitol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sord sorbitol dehydrogenase involved_in ISO (PMID:8487505) UniProt PMID:8487505 NCBI chrNW_004936471:7,760,097...7,805,475 JBrowse link
lactate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ldhd lactate dehydrogenase D involved_in ISO (PMID:30931947) UniProt PMID:30931947 NCBI chrNW_004936475:23,920,204...23,923,846 JBrowse link
leucine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bckdk branched chain keto acid dehydrogenase kinase ISO RGD PMID:27472223 RGD:39131293 NCBI chrNW_004936501:13,467,603...13,471,810 JBrowse link
G Ivd isovaleryl-CoA dehydrogenase involved_in ISO (PMID:7640268)
PMID:6401713
UniProt
BHF-UCL
PMID:6401713 PMID:7640268 RGD:8554099 NCBI chrNW_004936471:3,871,152...3,883,521 JBrowse link
long-chain fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISO (PMID:18757502)
(PMID:23671276)
UniProt PMID:18757502 PMID:23671276 NCBI chrNW_004936809:615,133...634,618 JBrowse link
G Acadl acyl-CoA dehydrogenase long chain ISO RGD PMID:3968063 RGD:2317678 NCBI chrNW_004936845:66,674...96,248 JBrowse link
G Aig1 androgen induced 1 involved_in ISO (PMID:27018888) UniProt PMID:27018888 NCBI chrNW_004936625:2,790,215...3,028,135 JBrowse link
G Lipe lipase E, hormone sensitive type acts_upstream_of_or_within ISO (MGI:3654969|PMID:16804080) MGI PMID:16804080 MGI:3654969 NCBI chrNW_004936706:122,939...139,506 JBrowse link
G LOC101965444 androgen dependent TFPI regulating protein involved_in ISO (PMID:27018888) UniProt PMID:27018888 NCBI chrNW_004936534:1,332,682...1,389,242 JBrowse link
malonate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsf3 acyl-CoA synthetase family member 3 involved_in ISO (PMID:21642549), (PMID:21846720) UniProt PMID:21642549 PMID:21846720 NCBI chrNW_004936641:700,218...736,875 JBrowse link
medium-chain fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadm acyl-CoA dehydrogenase medium chain involved_in ISO (PMID:1970566) RGD
BHF-UCL
PMID:1970566 PMID:3968063 RGD:2317678 NCBI chrNW_004936571:2,761,254...2,797,045 JBrowse link
methionine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mat1a methionine adenosyltransferase 1A involved_in ISO (PMID:10677294) UniProt PMID:10677294 NCBI chrNW_004936716:126,628...142,986 JBrowse link
methylglyoxal catabolic process to lactate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Park7 Parkinsonism associated deglycase involved_in ISO (PMID:28993701) UniProt PMID:28993701 NCBI chrNW_004936623:2,422,780...2,436,817 JBrowse link
negative regulation of arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 involved_in ISO (PMID:19278978) BHF-UCL PMID:19278978 NCBI chrNW_004936567:944,825...1,039,920 JBrowse link
negative regulation of fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acacb acetyl-CoA carboxylase beta involved_in ISO (MGI:3530688|PMID:15677334), (MGI:3629477|PMID:12920182) UniProt PMID:12920182 PMID:15677334 MGI:3530688 MGI:3629477 NCBI chrNW_004936769:950,970...1,053,671 JBrowse link
G Akt1 AKT serine/threonine kinase 1 involved_in ISO (PMID:16814735) BHF-UCL PMID:16814735 NCBI chrNW_004936621:620,163...639,115 JBrowse link
G Cnr1 cannabinoid receptor 1 ISO RGD PMID:19724020 RGD:2314644 NCBI chrNW_004936510:3,779,930...3,806,615 JBrowse link
G Dbi diazepam binding inhibitor, acyl-CoA binding protein ISO RGD PMID:11485163 RGD:2316274 NCBI chrNW_004936469:50,981,198...50,986,224 JBrowse link
G Mfsd2a major facilitator superfamily domain containing 2A acts_upstream_of_or_within ISO (MGI:5474727|PMID:23209793) ARUK-UCL PMID:23209793 MGI:5474727 NCBI chrNW_004936474:21,790,807...21,803,336 JBrowse link
G Pink1 PTEN induced kinase 1 ISO RGD PMID:25421206 RGD:11560775 NCBI chrNW_004936474:6,574,471...6,589,478 JBrowse link
G Plin5 perilipin 5 involved_in ISO (MGI:5440401|PMID:22532565)
(MGI:5559662|PMID:22675471), (MGI:5559666|PMID:21885430)
UniProt PMID:21885430 PMID:22532565 PMID:22675471 MGI:5440401 MGI:5559662 MGI:5559666 NCBI chrNW_004936588:2,629,762...2,637,303 JBrowse link
negative regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Etfbkmt electron transfer flavoprotein subunit beta lysine methyltransferase involved_in ISO (PMID:25416781)
(MGI:5700285|PMID:25023281)
UniProt PMID:25023281 PMID:25416781 MGI:5700285 NCBI chrNW_004936607:4,533,607...4,541,230 JBrowse link
negative regulation of glucose catabolic process to lactate via pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc25a12 solute carrier family 25 member 12 ISO RGD PMID:19764902 RGD:13628741 NCBI chrNW_004936509:1,994,082...2,077,731 JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase acts_upstream_of_or_within ISO (MGI:4867601|PMID:20935145) MGI PMID:20935145 MGI:4867601 NCBI chrNW_004936606:4,518,525...4,540,109 JBrowse link
G Tp53 tumor protein p53 acts_upstream_of_or_within ISO (MGI:4867601|PMID:20935145) MGI PMID:20935145 MGI:4867601 NCBI chrNW_004936595:919,807...935,367 JBrowse link
nicotinamide riboside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101970144 purine nucleoside phosphorylase involved_in ISO (PMID:19001417) UniProt PMID:19001417 NCBI chrNW_004936877:686,539...692,832 JBrowse link
G LOC101972142 methylthioadenosine phosphorylase NOT|involved_in ISO (PMID:19001417) UniProt PMID:19001417 NCBI chrNW_004936652:3,431,588...3,468,770 JBrowse link
nucleobase-containing small molecule catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 involved_in ISO (PMID:10858452) UniProt PMID:10858452 NCBI chrNW_004936555:6,896,661...6,920,333 JBrowse link
G Entpd7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in ISO (PMID:11278936) UniProt PMID:11278936 NCBI chrNW_004936636:406,389...446,167 JBrowse link
ornithine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otc ornithine transcarbamylase involved_in ISO (PMID:2556444), (PMID:8112735) BHF-UCL PMID:2556444 PMID:8112735 NCBI chrNW_004936502:5,234,253...5,291,891 JBrowse link
phenylacetate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pon3 paraoxonase 3 ISO RGD PMID:12946270 RGD:1303961 NCBI chrNW_004936585:4,902,430...4,928,377 JBrowse link
phylloquinone catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbr1 carbonyl reductase 1 ISO menadione catabolism RGD PMID:16359670 RGD:2316273 NCBI chrNW_004936500:6,569,708...6,591,266 JBrowse link
G Cbr3 carbonyl reductase 3 ISO menadione catabolism RGD PMID:18983987 RGD:2316293 NCBI chrNW_004936500:6,461,776...6,469,063 JBrowse link
polyprenol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Srd5a3 steroid 5 alpha-reductase 3 involved_in ISO (PMID:20637498)
(MGI:4821529|PMID:20637498)
UniProt PMID:20637498 MGI:4821529 NCBI chrNW_004936482:17,727,418...17,744,780 JBrowse link
positive regulation of fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISO (PMID:23123468)
(MGI:3835692|PMID:18854420), (MGI:3836690|PMID:18723473), (MGI:6189665|PMID:23123468)
UniProt PMID:18723473 PMID:18854420 PMID:23123468 MGI:3835692 MGI:3836690 MGI:6189665 NCBI chrNW_004936809:615,133...634,618 JBrowse link
G Abcd2 ATP binding cassette subfamily D member 2 involved_in ISO (PMID:10196381)
(MGI:3835692|PMID:18854420), (MGI:3836690|PMID:18723473)
UniProt PMID:10196381 PMID:18723473 PMID:18854420 MGI:3835692 MGI:3836690 NCBI chrNW_004936607:1,292,964...1,345,671 JBrowse link
G Acsl5 acyl-CoA synthetase long chain family member 5 ISO RGD PMID:14711823 RGD:2312802 NCBI chrNW_004936486:2,952,379...2,992,148 JBrowse link
G Akt2 AKT serine/threonine kinase 2 involved_in ISO (PMID:16814735) BHF-UCL PMID:16814735 NCBI chrNW_004936661:2,652,568...2,694,039 JBrowse link
G Cpt1a carnitine palmitoyltransferase 1A ISO RGD PMID:19302064 RGD:2311346 NCBI chrNW_004936599:1,491,934...1,535,101 JBrowse link
G Fabp1 fatty acid binding protein 1 ISO peroxisomal RGD PMID:16262600 RGD:1626442 NCBI chrNW_004936712:738,361...743,073 JBrowse link
G Irs1 insulin receptor substrate 1 involved_in ISO (PMID:16814735) BHF-UCL PMID:16814735 NCBI chrNW_004936525:9,064,442...9,125,972 JBrowse link
G Irs2 insulin receptor substrate 2 involved_in ISO (PMID:16814735) BHF-UCL PMID:16814735 NCBI chrNW_004936472:2,772,187...2,796,398 JBrowse link
G Mtln mitoregulin involved_in ISO (MGI:6278482|PMID:29949755) UniProt PMID:29949755 MGI:6278482 NCBI chrNW_004943304:685...1,449 JBrowse link
G Plin5 perilipin 5 involved_in ISO PMID:22127648
(MGI:3709110|PMID:17130488)
UniProt PMID:17130488 PMID:22127648 MGI:3709110 RGD:8553692 NCBI chrNW_004936588:2,629,762...2,637,303 JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in ISO (PMID:20007935) BHF-UCL PMID:20007935 NCBI chrNW_004936546:5,331,220...5,332,669 JBrowse link
positive regulation of glucose catabolic process to lactate via pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in ISO (MGI:3759354|PMID:17828264) UniProt PMID:17828264 MGI:3759354 NCBI chrNW_004936599:3,033,854...3,046,364 JBrowse link
proline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino acid oxidase involved_in ISO (PMID:16616139) UniProt PMID:16616139 NCBI chrNW_004936769:744,862...758,086 JBrowse link
purine nucleoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt1 nudix hydrolase 1 involved_in ISO (PMID:11139615) UniProt PMID:11139615 NCBI chrNW_004936823:7,104...22,083 JBrowse link
purine ribonucleoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enpp4 ectonucleotide pyrophosphatase/phosphodiesterase 4 involved_in ISO (PMID:22995898) UniProt PMID:22995898 NCBI chrNW_004936476:14,188,328...14,204,063 JBrowse link
pyridoxal phosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101971587 pyridoxal phosphatase involved_in ISO (PMID:14522954), (PMID:8132548)
(MGI:5545856|PMID:24338687), (MGI:5545857|PMID:24338473), (MGI:6695679|PMID:25783190)
UniProt PMID:8132548 PMID:14522954 PMID:24338473 PMID:24338687 PMID:25783190 MGI:5545856 MGI:5545857 MGI:6695679 NCBI chrNW_004936492:3,420,590...3,426,764 JBrowse link
pyrimidine nucleoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Upb1 beta-ureidopropionase 1 involved_in ISO (PMID:22525402) UniProt PMID:22525402 NCBI chrNW_004936619:668,380...713,720 JBrowse link
quinolinate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Qprt quinolinate phosphoribosyltransferase involved_in
acts_upstream_of_or_within
ISO (PMID:24038671), (PMID:3409840), (PMID:9473669)
(PMID:9473669)
UniProt
MGI
PMID:3409840 PMID:9473669 PMID:24038671 NCBI chrNW_004936501:12,743,634...12,763,068 JBrowse link
regulation of fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb11 ATP binding cassette subfamily B member 11 involved_in ISO (MGI:5442473|PMID:22619174) UniProt PMID:22619174 MGI:5442473 NCBI chrNW_004936469:10,521,576...10,599,005 JBrowse link
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISO (MGI:1095802|PMID:9256488), (MGI:1101351|PMID:9418970), (MGI:5635749|PMID:25255441), (MGI:87573|PMID:9126326) UniProt PMID:9126326 PMID:9256488 PMID:9418970 PMID:25255441 MGI:1095802 MGI:1101351 MGI:5635749 MGI:87573 NCBI chrNW_004936809:615,133...634,618 JBrowse link
G Lonp2 lon peptidase 2, peroxisomal involved_in ISO (PMID:22002062) UniProt PMID:22002062 NCBI chrNW_004936475:1,480,723...1,584,757 JBrowse link
G Mlycd malonyl-CoA decarboxylase ISO RGD PMID:10516138 RGD:1600797 NCBI chrNW_004936641:3,836,418...3,846,485 JBrowse link
G Mtor mechanistic target of rapamycin kinase ISO RGD PMID:17142137 RGD:1625611 NCBI chrNW_004936474:158,376...282,310 JBrowse link
G Tysnd1 trypsin like peroxisomal matrix peptidase 1 involved_in ISO (PMID:22002062) UniProt PMID:22002062 NCBI chrNW_004936521:8,442,175...8,450,221 JBrowse link
retinoic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101970215 cytochrome P450 2W1 involved_in ISO (PMID:26936974) UniProt PMID:26936974 NCBI chrNW_004936754:1,203,004...1,208,131 JBrowse link
G LOC101975674 cytochrome P450 26B1 involved_in ISO (PMID:10823918) RGD
BHF-UCL
PMID:10823918 PMID:21138835 RGD:6771354 NCBI chrNW_004936491:16,010,394...16,028,852 JBrowse link
G LOC101977861 cytochrome P450 26A1 involved_in ISO (PMID:10823918)
(MGI:894533|PMID:9250660)
BHF-UCL
MGI
PMID:9250660 PMID:10823918 MGI:894533 NCBI chrNW_004936601:1,810,572...1,815,927 JBrowse link
G LOC101978131 cytochrome P450 26C1 involved_in ISO (PMID:14532297) BHF-UCL PMID:14532297 NCBI chrNW_004936601:1,818,037...1,828,400 JBrowse link
S-adenosylhomocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahcy adenosylhomocysteinase acts_upstream_of_or_within ISO (MGI:2183618|PMID:12023972) RGD
MGI
PMID:11741948 PMID:12023972 MGI:2183618 RGD:730275 NCBI chrNW_004936561:6,314,797...6,333,961 JBrowse link
selenocysteine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scly selenocysteine lyase involved_in ISO PMID:20164179 CAFA PMID:20164179 RGD:12793035 NCBI chrNW_004936525:381,188...407,544 JBrowse link
serine family amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Thnsl2 threonine synthase like 2 involved_in ISO (MGI:3690523|PMID:17034760) BHF-UCL PMID:17034760 MGI:3690523 NCBI chrNW_004936712:684,711...699,714 JBrowse link
sorbitol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sord sorbitol dehydrogenase involved_in ISO (PMID:12962626), (PMID:3365415), (PMID:6870831), (PMID:8487505)
(PMID:32367058)
UniProt
FlyBase
PMID:3365415 PMID:6870831 PMID:8487505 PMID:12962626 PMID:32367058 NCBI chrNW_004936471:7,760,097...7,805,475 JBrowse link
thymidine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpyd dihydropyrimidine dehydrogenase involved_in ISO (PMID:1512248) UniProt PMID:1512248 NCBI chrNW_004936537:1,660,461...2,439,305 JBrowse link
tryptophan catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acmsd aminocarboxymuconate semialdehyde decarboxylase ISO RGD PMID:11802786 RGD:70243 NCBI chrNW_004936469:40,858,338...40,904,807 JBrowse link
G Il4i1 interleukin 4 induced 1 involved_in ISO (PMID:17356132), (PMID:25767141) UniProt PMID:17356132 PMID:25767141 NCBI chrNW_004936664:3,674,612...3,715,036 JBrowse link
G Kynu kynureninase involved_in ISO (PMID:17334708) UniProt PMID:17334708 NCBI chrNW_004936469:33,632,885...33,805,158 JBrowse link
tryptophan catabolic process to acetyl-CoA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kynu kynureninase ISO RGD PMID:7236232 RGD:2303721 NCBI chrNW_004936469:33,632,885...33,805,158 JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase ISO RGD PMID:7236232 RGD:2303721 NCBI chrNW_004936576:2,537,702...2,555,790 JBrowse link
tryptophan catabolic process to indole-3-acetate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il4i1 interleukin 4 induced 1 involved_in ISO (PMID:32818467), (PMID:32866000) UniProt PMID:32818467 PMID:32866000 NCBI chrNW_004936664:3,674,612...3,715,036 JBrowse link
tryptophan catabolic process to kynurenine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afmid arylformamidase acts_upstream_of_or_within ISO (MGI:3587527|PMID:15866519) MGI PMID:15866519 MGI:3587527 NCBI chrNW_004936594:2,794,927...2,805,689 JBrowse link
G Ido1 indoleamine 2,3-dioxygenase 1 acts_upstream_of_or_within ISO (MGI:2151782|PMID:2419335), (MGI:2156954|PMID:11751753) RGD
MGI
PMID:2419335 PMID:10719243 PMID:11513477 PMID:11751753 MGI:2151782 MGI:2156954 RGD:2290190 RGD:2290543 NCBI chrNW_004936843:658,058...672,662 JBrowse link
G Ido2 indoleamine 2,3-dioxygenase 2 involved_in
acts_upstream_of_or_within
ISO (PMID:17671174)
(MGI:3719924|PMID:17671174)
(MGI:3712725|PMID:17499941)
UniProt
MGI
PMID:17499941 PMID:17671174 MGI:3712725 MGI:3719924 NCBI chrNW_004936843:595,237...649,390 JBrowse link
G Tdo2 tryptophan 2,3-dioxygenase involved_in ISO (PMID:27762317) UniProt PMID:27762317 NCBI chrNW_004936576:2,537,702...2,555,790 JBrowse link
tyrosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il4i1 interleukin 4 induced 1 involved_in ISO (PMID:17356132) UniProt PMID:17356132 NCBI chrNW_004936664:3,674,612...3,715,036 JBrowse link
G Tat tyrosine aminotransferase involved_in ISO (PMID:7999802)
(MGI:5430853|PMID:21153519)
UniProt PMID:7999802 PMID:21153519 MGI:5430853 NCBI chrNW_004936475:22,190,282...22,199,398 JBrowse link
UDP-glucose catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Galt galactose-1-phosphate uridylyltransferase ISO RGD PMID:8255669 RGD:1598677 NCBI chrNW_004936524:2,726,795...2,730,049 JBrowse link
UDP-N-acetylglucosamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mgat1 alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase acts_upstream_of_or_within ISO (MGI:51667|PMID:1421759) MGI PMID:1421759 MGI:51667 NCBI chrNW_004936826:344,452...364,929 JBrowse link
urate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase involved_in ISO (MGI:3665448|PMID:16462750) MGI PMID:16462750 MGI:3665448 NCBI chrNW_004936472:23,151,674...23,161,292 JBrowse link
uridine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Upp1 uridine phosphorylase 1 involved_in ISO (PMID:7488099)
(MGI:5476603|PMID:23355744), (MGI:73237|PMID:7744869)
UniProt PMID:7488099 PMID:7744869 PMID:23355744 MGI:5476603 MGI:73237 NCBI chrNW_004936478:22,508,602...22,531,604 JBrowse link
G Upp2 uridine phosphorylase 2 involved_in ISO (PMID:12849978), (PMID:21855639)
(MGI:2683856|PMID:14715930)
UniProt PMID:12849978 PMID:14715930 PMID:21855639 MGI:2683856 NCBI chrNW_004936469:20,465,767...20,513,084 JBrowse link
valine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh6a1 aldehyde dehydrogenase 6 family member A1 involved_in ISO (PMID:23835272) RGD
BHF-UCL
PMID:2768248 PMID:23835272 RGD:1599052 NCBI chrNW_004936488:3,320,357...3,340,463 JBrowse link
G Bckdk branched chain keto acid dehydrogenase kinase ISO RGD PMID:27472223 RGD:39131293 NCBI chrNW_004936501:13,467,603...13,471,810 JBrowse link
G Hibadh 3-hydroxyisobutyrate dehydrogenase involved_in ISO (PMID:16466957) UniProt PMID:16466957 NCBI chrNW_004936478:4,118,752...4,219,908 JBrowse link
very long-chain fatty acid beta-oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acox1 acyl-CoA oxidase 1 involved_in ISO (PMID:32169171) UniProt PMID:32169171 NCBI chrNW_004936594:1,115,607...1,140,085 JBrowse link
very long-chain fatty acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 involved_in ISO (PMID:21145416)
(MGI:3836690|PMID:18723473)
PMID:25043761
(PMID:18757502)
(PMID:9425230)
UniProt PMID:9425230 PMID:18723473 PMID:18757502 PMID:21145416 PMID:25043761 MGI:3836690 RGD:13673760 NCBI chrNW_004936809:615,133...634,618 JBrowse link
G Abcd2 ATP binding cassette subfamily D member 2 involved_in ISO (PMID:21145416)
(MGI:3836690|PMID:18723473)
PMID:25043761
UniProt PMID:18723473 PMID:21145416 PMID:25043761 MGI:3836690 RGD:13673760 NCBI chrNW_004936607:1,292,964...1,345,671 JBrowse link
G Abcd3 ATP binding cassette subfamily D member 3 involved_in ISO (PMID:9425230) UniProt PMID:9425230 NCBI chrNW_004936537:4,659,685...4,745,992 JBrowse link
G Slc27a2 solute carrier family 27 member 2 acts_upstream_of_or_within ISO (MGI:2662022|PMID:12719378) MGI PMID:12719378 MGI:2662022 NCBI chrNW_004936471:12,259,779...12,298,760 JBrowse link
G Slc27a4 solute carrier family 27 member 4 acts_upstream_of_or_within ISO (MGI:3719310|PMID:17522045) MGI PMID:17522045 MGI:3719310 NCBI chrNW_004936487:15,877,075...15,905,752 JBrowse link
vitamin D catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf23 fibroblast growth factor 23 involved_in ISO (PMID:15040831) UniProt PMID:15040831 NCBI chrNW_004936606:4,555,034...4,561,961 JBrowse link
G LOC101957714 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial involved_in ISO PMID:10231362
PMID:16617161
(PMID:16617161), (PMID:24893882), (PMID:29461981), (PMID:8506296), (PMID:8679605)
UniProt PMID:8506296 PMID:8679605 PMID:10231362 PMID:16617161 PMID:24893882 More... RGD:14995311 RGD:14995316 NCBI chrNW_004936514:1,467,460...1,480,185 JBrowse link
G LOC101978323 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial involved_in ISO PMID:9333115
(MGI:1097206|PMID:9295274)
BHF-UCL PMID:9295274 PMID:9333115 MGI:1097206 RGD:69373 NCBI chrNW_004936646:1,899,686...1,904,104 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12173
    metabolic process 7652
      small molecule metabolic process 1221
        small molecule catabolic process 222
          alcohol catabolic process + 27
          dibenzo-p-dioxin catabolic process 1
          formaldehyde catabolic process 0
          hypochlorous acid catabolic process 0
          ketone body catabolic process + 3
          ketone catabolic process + 4
          monosaccharide catabolic process + 19
          nucleobase-containing small molecule catabolic process + 22
          organic acid catabolic process + 146
          thiocyanate catabolic process 0
          urate catabolic process 1
          urea catabolic process + 0
          vitamin catabolic process + 12
paths to the root