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ONTOLOGY REPORT - ANNOTATIONS


Term:small molecule metabolic process
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Accession:GO:0044281 term browser browse the term
Definition:The chemical reactions and pathways involving small molecules, any low molecular weight, monomeric, non-encoded molecule.
Comment:Small molecules in GO include monosaccharides but exclude disaccharides and polysaccharides.
Synonyms:exact_synonym: small molecule metabolism


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'de novo' GDP-L-fucose biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gfus GDP-L-fucose synthase involved_in ISO (PMID:9525924) UniProt PMID:9525924 NCBI chrNW_004936470:8,523,240...8,527,451 JBrowse link
G Gmds GDP-mannose 4,6-dehydratase involved_in ISO (PMID:9525924) UniProt PMID:9525924 NCBI chrNW_004936633:2,752,677...3,367,408 JBrowse link
'de novo' IMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase ISO RGD PMID:9332377 RGD:70804 NCBI chrNW_004936586:1,782,581...1,809,458 JBrowse link
'de novo' NAD biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nadsyn1 NAD synthetase 1 involved_in ISO (PMID:31883644) UniProt PMID:31883644 NCBI chrNW_004936794:1,394,975...1,423,807 JBrowse link
'de novo' pyrimidine nucleobase biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in ISO (PMID:24332717) RGD
UniProt
PMID:1476792 PMID:24332717 RGD:5132591 NCBI chrNW_004936493:5,308,268...5,332,934 JBrowse link
G Dhodh dihydroorotate dehydrogenase (quinone) ISO RGD PMID:1476792 RGD:5132591 NCBI chrNW_004936475:21,863,627...21,877,660 JBrowse link
G Mtor mechanistic target of rapamycin kinase involved_in ISO (MGI:5469988|PMID:23429704) CACAO PMID:23429704 MGI:5469988 NCBI chrNW_004936474:158,376...282,310 JBrowse link
10-formyltetrahydrofolate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in ISO (PMID:1881876)
(MGI:5503248|PMID:23704330)
BHF-UCL PMID:1881876 PMID:23704330 MGI:5503248 NCBI chrNW_004936495:8,100,977...8,170,244 JBrowse link
G Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like involved_in ISO (PMID:12937168) BHF-UCL PMID:12937168 NCBI chrNW_004936489:3,877,423...4,060,129 JBrowse link
10-formyltetrahydrofolate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mthfd2l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like ISO RGD PMID:21163947 RGD:7244288 NCBI chrNW_004936598:1,401,392...1,514,314 JBrowse link
2-oxobutyrate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Thnsl2 threonine synthase like 2 involved_in ISO (MGI:3690523|PMID:17034760) BHF-UCL PMID:17034760 MGI:3690523 NCBI chrNW_004936712:684,711...699,714 JBrowse link
2-oxoglutarate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aadat aminoadipate aminotransferase involved_in ISO (PMID:18620547) UniProt PMID:18620547 NCBI chrNW_004936516:2,030,032...2,052,025 JBrowse link
G Dld dihydrolipoamide dehydrogenase ISO RGD PMID:3571202 RGD:2306876 NCBI chrNW_004936479:16,247,230...16,271,597 JBrowse link
G Dlst dihydrolipoamide S-succinyltransferase involved_in ISO (PMID:10806400) RGD
UniProt
PMID:3571202 PMID:10806400 RGD:2306876 NCBI chrNW_004936488:4,038,985...4,061,071 JBrowse link
G Gpt2 glutamic--pyruvic transaminase 2 involved_in ISO (PMID:11863375) UniProt PMID:11863375 NCBI chrNW_004936475:262,558...299,766 JBrowse link
G Idh1 isocitrate dehydrogenase (NADP(+)) 1 involved_in ISO (PMID:19935646) UniProt PMID:19935646 NCBI chrNW_004936950:334,894...349,221 JBrowse link
G Idh3a isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha ISO RGD PMID:938457 RGD:2306828 NCBI chrNW_004936471:36,823,003...36,842,576 JBrowse link
G Idh3b isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta ISO RGD PMID:938457 RGD:2306828 NCBI chrNW_004936485:16,033,287...16,038,097 JBrowse link
G Idh3g isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma ISO RGD PMID:938457 RGD:2306828 NCBI chrNW_004936809:666,231...675,279 JBrowse link
G Kyat3 kynurenine aminotransferase 3 involved_in ISO (MGI:3835225|PMID:19029248) UniProt PMID:19029248 MGI:3835225 NCBI chrNW_004936732:77,427...125,816 JBrowse link
G Ogdh oxoglutarate dehydrogenase involved_in ISO (PMID:24495017), (PMID:29211711) RGD
UniProt
PMID:3571202 PMID:9712727 PMID:24495017 PMID:29211711 RGD:2306876 RGD:2306877 NCBI chrNW_004936478:19,506,845...19,584,411 JBrowse link
G Ogdhl oxoglutarate dehydrogenase L involved_in ISO PMID:18783430 UniProt PMID:18783430 RGD:42721998 NCBI chrNW_004936728:573,079...599,155 JBrowse link
G Tat tyrosine aminotransferase involved_in ISO (PMID:7999802)
(MGI:5430853|PMID:21153519)
UniProt PMID:7999802 PMID:21153519 MGI:5430853 NCBI chrNW_004936475:22,190,282...22,199,398 JBrowse link
3'-phosphoadenosine 5'-phosphosulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Papss1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:14747722), (PMID:23207770)
(MGI:2448448|PMID:12414806)
UniProt
MGI
PMID:12414806 PMID:14747722 PMID:23207770 MGI:2448448 NCBI chrNW_004936818:863,969...975,562 JBrowse link
3'-phosphoadenosine 5'-phosphosulfate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:7830796) BHF-UCL PMID:7830796 NCBI chrNW_004937067:194,375...246,607 JBrowse link
G LOC101970597 sulfotransferase 1C1 involved_in ISO (PMID:17425406) UniProt PMID:17425406 NCBI chrNW_004936729:1,783,124...1,796,723 JBrowse link
G Sult2b1 sulfotransferase family 2B member 1 involved_in ISO (PMID:12923182) CAFA PMID:12923182 NCBI chrNW_004936664:2,626,810...2,655,290 JBrowse link
4-hydroxyproline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hoga1 4-hydroxy-2-oxoglutarate aldolase 1 involved_in ISO (PMID:21998747) BHF-UCL PMID:21998747 NCBI chrNW_004936636:2,101,184...2,125,377 JBrowse link
9-cis-retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a1 aldehyde dehydrogenase 1 family member A1 acts_upstream_of_or_within ISO (MGI:2662611|PMID:11876656) MGI PMID:11876656 MGI:2662611 NCBI chrNW_004936503:8,869,073...8,953,726 JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family member A2 acts_upstream_of_or_within ISO (MGI:2662611|PMID:11876656) MGI PMID:11876656 MGI:2662611 NCBI chrNW_004936471:19,175,997...19,263,335 JBrowse link
G Aldh8a1 aldehyde dehydrogenase 8 family member A1 acts_upstream_of_or_within ISO (MGI:2662611|PMID:11876656) MGI PMID:11876656 MGI:2662611 NCBI chrNW_004936560:2,562,394...2,580,261 JBrowse link
G Dhrs9 dehydrogenase/reductase 9 involved_in ISO (PMID:11304534) UniProt PMID:11304534 NCBI chrNW_004936469:10,465,701...10,487,534 JBrowse link
G LOC101969148 cytochrome P450 1A1 ISO 9-cis- and all-trans-retinoic acid synthesized from 9-cis- and all-trans-retinal RGD PMID:8765131 RGD:2306683 NCBI chrNW_004936471:33,682,730...33,688,332 JBrowse link
9-cis-retinoic acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a1 aldehyde dehydrogenase 1 family member A1 ISO RGD PMID:17167544 RGD:2306320 NCBI chrNW_004936503:8,869,073...8,953,726 JBrowse link
acetate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acss1 acyl-CoA synthetase short chain family member 1 ISO RGD PMID:4334748 RGD:2317572 NCBI chrNW_004936620:739,633...800,472 JBrowse link
G Acss2 acyl-CoA synthetase short chain family member 2 ISO RGD PMID:4334748 RGD:2317572 NCBI chrNW_004936561:5,794,685...5,842,619 JBrowse link
acetoacetic acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tyrp1 tyrosinase related protein 1 acts_upstream_of_or_within ISO (MGI:76308|PMID:7665913) MGI PMID:7665913 MGI:76308 NCBI chrNW_004936539:6,537,448...6,555,440 JBrowse link
acetyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 involved_in ISO (PMID:17371050) BHF-UCL PMID:17371050 NCBI chrNW_004936551:594,647...626,016 JBrowse link
G Acly ATP citrate lyase involved_in ISO (PMID:1371749) BHF-UCL PMID:1371749 NCBI chrNW_004936490:16,758,001...16,798,152 JBrowse link
G Acss1 acyl-CoA synthetase short chain family member 1 involved_in
acts_upstream_of_or_within
ISO (PMID:16788062)
(MGI:2151932|PMID:11150295)
UniProt
MGI
PMID:11150295 PMID:16788062 MGI:2151932 NCBI chrNW_004936620:739,633...800,472 JBrowse link
G Acss2 acyl-CoA synthetase short chain family member 2 acts_upstream_of_or_within ISO (MGI:2151932|PMID:11150295) MGI PMID:11150295 MGI:2151932 NCBI chrNW_004936561:5,794,685...5,842,619 JBrowse link
G Dip2a disco interacting protein 2 homolog A involved_in ISO (MGI:6478983|PMID:30672040) UniProt PMID:30672040 MGI:6478983 NCBI chrNW_004936778:49,130...123,345 JBrowse link
G Mlycd malonyl-CoA decarboxylase involved_in ISO (PMID:10417274), (PMID:10455107), (PMID:9869665) RGD
UniProt
PMID:9869665 PMID:10417274 PMID:10455107 PMID:17316539 RGD:1600790 NCBI chrNW_004936641:3,836,418...3,846,485 JBrowse link
G Ppcs phosphopantothenoylcysteine synthetase involved_in ISO (PMID:29754768) UniProt PMID:29754768 NCBI chrNW_004936474:23,867,117...23,870,832 JBrowse link
acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlat dihydrolipoamide S-acetyltransferase ISO RGD PMID:7487891 RGD:1599112 NCBI chrNW_004936612:2,395,452...2,437,592 JBrowse link
G Dld dihydrolipoamide dehydrogenase ISO RGD PMID:7487891 RGD:1599112 NCBI chrNW_004936479:16,247,230...16,271,597 JBrowse link
G Pdha1 pyruvate dehydrogenase E1 subunit alpha 1 involved_in ISO (PMID:19081061) RGD
UniProt
PMID:7487891 PMID:19081061 RGD:1599112 NCBI chrNW_004936844:889,720...906,631 JBrowse link
G Pdha2 pyruvate dehydrogenase E1 subunit alpha 2 ISO RGD PMID:7487891 RGD:1599112 NCBI chrNW_004936717:2,377,982...2,379,137 JBrowse link
G Pdhb pyruvate dehydrogenase E1 subunit beta involved_in ISO (PMID:19081061) RGD
UniProt
PMID:7487891 PMID:19081061 RGD:1599112 NCBI chrNW_004936473:2,580,642...2,586,266 JBrowse link
acetyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 involved_in ISO (PMID:17371050) BHF-UCL PMID:17371050 NCBI chrNW_004936551:594,647...626,016 JBrowse link
G Nudt7 nudix hydrolase 7 acts_upstream_of_or_within
involved_in
ISO (MGI:2137102|PMID:11415433)
(MGI:6450264|PMID:18799520)
MGI
UniProt
PMID:11415433 PMID:18799520 MGI:2137102 MGI:6450264 NCBI chrNW_004936475:26,079,298...26,095,466 JBrowse link
acetyl-CoA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acaa2 acetyl-CoA acyltransferase 2 ISO RGD PMID:16476568 RGD:2317620 NCBI chrNW_004936497:13,242,644...13,269,007 JBrowse link
G Acaca acetyl-CoA carboxylase alpha involved_in ISO (MGI:4840155|PMID:20952656) UniProt PMID:20952656 MGI:4840155 NCBI chrNW_004936490:927,769...1,191,483 JBrowse link
G Acacb acetyl-CoA carboxylase beta involved_in ISO (PMID:20952656) UniProt PMID:20952656 NCBI chrNW_004936769:950,970...1,053,671 JBrowse link
G Acly ATP citrate lyase ISO RGD PMID:18062843 RGD:2317315 NCBI chrNW_004936490:16,758,001...16,798,152 JBrowse link
G Acot12 acyl-CoA thioesterase 12 acts_upstream_of_or_within ISO (MGI:2450440|PMID:12545200) MGI PMID:12545200 MGI:2450440 NCBI chrNW_004936469:635,663...681,373 JBrowse link
G Cs citrate synthase ISO RGD PMID:818082 PMID:938457 PMID:5820645 RGD:2306824 RGD:2306825 RGD:2306828 NCBI chrNW_004936646:676,926...704,988 JBrowse link
G Fasn fatty acid synthase ISO RGD PMID:18062843 RGD:2317315 NCBI chrNW_004936594:5,591,785...5,609,886 JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 involved_in ISO (PMID:23751782) UniProt PMID:23751782 NCBI chrNW_004936627:4,451,847...4,473,163 JBrowse link
acyl-CoA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acadsb acyl-CoA dehydrogenase short/branched chain involved_in ISO PMID:8660691 MGI PMID:8660691 RGD:631739 NCBI chrNW_004936486:11,668,099...11,707,946 JBrowse link
G Acot12 acyl-CoA thioesterase 12 involved_in ISO PMID:11322891 HGNC-UCL PMID:11322891 RGD:633789 NCBI chrNW_004936469:635,663...681,373 JBrowse link
G Acot4 acyl-CoA thioesterase 4 involved_in ISO (PMID:16940157)
(MGI:3663233|PMID:16940157)
HGNC-UCL PMID:16940157 MGI:3663233 NCBI chrNW_004936488:2,912,016...2,914,995 JBrowse link
G Acot8 acyl-CoA thioesterase 8 involved_in
acts_upstream_of_or_within
ISO (PMID:9153233), (PMID:9299485)
(MGI:2156286|PMID:11673457)
PMID:11785945
UniProt
MGI
PMID:9153233 PMID:9299485 PMID:11673457 PMID:11785945 MGI:2156286 RGD:70235 NCBI chrNW_004936514:7,166,392...7,180,537 JBrowse link
G Acot9 acyl-CoA thioesterase 9 involved_in ISO (MGI:1928308|PMID:10383425) HGNC-UCL PMID:10383425 MGI:1928308 NCBI chrNW_004936624:795,272...834,441 JBrowse link
G Baat bile acid-CoA:amino acid N-acyltransferase involved_in ISO (PMID:12810727) UniProt PMID:12810727 NCBI chrNW_004936524:9,536,032...9,544,901 JBrowse link
G Gcdh glutaryl-CoA dehydrogenase ISO RGD PMID:6895440 RGD:1598697 NCBI chrNW_004936659:1,955,601...1,961,925 JBrowse link
G Gpam glycerol-3-phosphate acyltransferase, mitochondrial acts_upstream_of_or_within ISO (MGI:3619815|PMID:15878874) MGI PMID:15878874 MGI:3619815 NCBI chrNW_004936486:2,754,753...2,823,600 JBrowse link
G Gpat4 glycerol-3-phosphate acyltransferase 4 involved_in ISO (PMID:18238778) UniProt PMID:18238778 NCBI chrNW_004936785:967,871...1,007,761 JBrowse link
G Hmgcl 3-hydroxy-3-methylglutaryl-CoA lyase ISO RGD PMID:2573547 RGD:1599519 NCBI chrNW_004936474:8,955,216...8,971,078 JBrowse link
G Hnf4a hepatocyte nuclear factor 4 alpha ISO RGD PMID:15870076 RGD:1625002 NCBI chrNW_004936530:2,401,053...2,425,989 JBrowse link
G Oxsm 3-oxoacyl-ACP synthase, mitochondrial involved_in ISO (PMID:15668256) HGNC-UCL PMID:15668256 NCBI chrNW_004936473:17,298,641...17,302,954 JBrowse link
adenine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aprt adenine phosphoribosyltransferase acts_upstream_of_or_within ISO (MGI:83266|PMID:8894695)
(MGI:80735|PMID:8643571), (MGI:83266|PMID:8894695)
MGI PMID:8643571 PMID:8894695 MGI:80735 MGI:83266 NCBI chrNW_004936641:913,674...916,312 JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 acts_upstream_of_or_within ISO (MGI:83266|PMID:8894695) MGI PMID:8894695 MGI:83266 NCBI chrNW_004936691:650,753...694,362 JBrowse link
adenine salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aprt adenine phosphoribosyltransferase acts_upstream_of_or_within ISO (MGI:85816|PMID:8864750) MGI PMID:8864750 MGI:85816 NCBI chrNW_004936641:913,674...916,312 JBrowse link
G Hprt1 hypoxanthine phosphoribosyltransferase 1 acts_upstream_of_or_within ISO (MGI:1331314|PMID:10037486) MGI PMID:10037486 MGI:1331314 NCBI chrNW_004936691:650,753...694,362 JBrowse link
adenosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5e 5'-nucleotidase ecto acts_upstream_of_or_within ISO (MGI:3770326|PMID:16547283) MGI PMID:16547283 MGI:3770326 NCBI chrNW_004936510:5,797,218...5,846,118 JBrowse link
adenosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within
involved_in
ISO (MGI:2151677|PMID:11591798), (MGI:3531253|PMID:8663040)
(PMID:16670267)
(MGI:1861066|PMID:10899903), (MGI:2155238|PMID:9478961), (MGI:3525377|PMID:15630442), (MGI:3619310|PMID:14607964), (MGI:3640719|PMID:10720488), (MGI:3664521|PMID:16841096), (MGI:3794903|PMID:18340377)
(MGI:74163|PMID:7670465)
(MGI:1095761|PMID:9272950), (MGI:72798|PMID:7731963)
(MGI:4835158|PMID:8672487)
(MGI:1095761|PMID:9272950), (MGI:3531253|PMID:8663040), (MGI:3808984|PMID:2015347), (MGI:49990|PMID:1618849), (MGI:59127|PMID:2387582), (MGI:76875|PMID:7592575), (MGI:83255|PMID:8894685)
MGI
UniProt
PMID:1618849 PMID:2015347 PMID:2387582 PMID:7592575 PMID:7670465 PMID:7731963 PMID:8663040 PMID:8672487 PMID:8894685 PMID:9272950 PMID:9478961 PMID:10720488 PMID:10899903 PMID:11591798 PMID:14607964 PMID:15630442 PMID:16670267 PMID:16841096 PMID:18340377 MGI:1095761 MGI:1861066 MGI:2151677 MGI:2155238 MGI:3525377 MGI:3531253 MGI:3619310 MGI:3640719 MGI:3664521 MGI:3794903 MGI:3808984 MGI:4835158 MGI:49990 MGI:59127 MGI:72798 MGI:74163 MGI:76875 MGI:83255 NCBI chrNW_004936530:2,217,713...2,224,070 JBrowse link
G Ada2 adenosine deaminase 2 involved_in ISO (PMID:20147294) UniProt PMID:20147294 NCBI chrNW_004936807:232,851...262,593 JBrowse link
G Xdh xanthine dehydrogenase involved_in ISO (MGI:49329|PMID:1590774), (MGI:6478097|PMID:29895374), (MGI:6478533|PMID:8226898)
(MGI:2447927|PMID:12502743)
(MGI:6306257|PMID:30936145)
MGI PMID:1590774 PMID:8226898 PMID:12502743 PMID:29895374 PMID:30936145 MGI:2447927 MGI:49329 MGI:6306257 MGI:6478097 MGI:6478533 NCBI chrNW_004936493:1,762,814...1,824,501 JBrowse link
adenosine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acp3 acid phosphatase 3 involved_in ISO (PMID:18940592)
(MGI:3849266|PMID:18940592)
UniProt PMID:18940592 MGI:3849266 NCBI chrNW_004936529:5,661,772...5,723,108 JBrowse link
G Ada adenosine deaminase ISO RGD PMID:3746429 PMID:4462574 PMID:6815190 PMID:12675911 RGD:2291853 RGD:2291855 RGD:2291857 RGD:2291861 NCBI chrNW_004936530:2,217,713...2,224,070 JBrowse link
G Adk adenosine kinase ISO RGD PMID:12675911 RGD:2291861 NCBI chrNW_004936521:4,560,078...5,023,780 JBrowse link
G Nt5c1a 5'-nucleotidase, cytosolic IA ISO RGD PMID:12675911 RGD:2291861 NCBI chrNW_004936474:21,535,197...21,542,417 JBrowse link
G Nt5c1b 5'-nucleotidase, cytosolic IB ISO RGD PMID:12675911 RGD:2291861 NCBI chrNW_004936493:12,520,480...12,547,394 JBrowse link
G Nt5c2 5'-nucleotidase, cytosolic II ISO RGD PMID:12675911 RGD:2291861 NCBI chrNW_004936600:2,828,277...2,892,795 JBrowse link
G Nt5c3a 5'-nucleotidase, cytosolic IIIA ISO RGD PMID:12675911 RGD:2291861 NCBI chrNW_004936478:8,785,984...8,834,776 JBrowse link
G Nt5e 5'-nucleotidase ecto ISO RGD PMID:12675911 RGD:2291861 NCBI chrNW_004936510:5,797,218...5,846,118 JBrowse link
G Ptgdr prostaglandin D2 receptor acts_upstream_of_or_within ISO (MGI:3761771|PMID:11562489) MGI PMID:11562489 MGI:3761771 NCBI chrNW_004936697:2,481,340...2,488,868 JBrowse link
ADP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak1 adenylate kinase 1 ISO RGD PMID:19049516 RGD:5134369 NCBI chrNW_004936487:15,507,663...15,517,401 JBrowse link
G Ak2 adenylate kinase 2 ISO RGD PMID:5123889 RGD:5490208 NCBI chrNW_004936474:15,887,014...15,908,522 JBrowse link
G Ak3 adenylate kinase 3 ISO RGD PMID:5010295 PMID:5123889 RGD:5490208 RGD:5490216 NCBI chrNW_004936503:497,391...517,011 JBrowse link
ADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ampd3 adenosine monophosphate deaminase 3 involved_in ISO (MGI:5917829|PMID:28746349) MGI PMID:28746349 MGI:5917829 NCBI chrNW_004936528:7,847,156...7,891,585 JBrowse link
G Nt5e 5'-nucleotidase ecto involved_in ISO (MGI:6478084|PMID:20430891)
(MGI:5917829|PMID:28746349)
MGI PMID:20430891 PMID:28746349 MGI:5917829 MGI:6478084 NCBI chrNW_004936510:5,797,218...5,846,118 JBrowse link
G Nudt9 nudix hydrolase 9 acts_upstream_of_or_within ISO (MGI:2158549|PMID:11825615) MGI PMID:11825615 MGI:2158549 NCBI chrNW_004936905:586,160...616,490 JBrowse link
ADP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ampd3 adenosine monophosphate deaminase 3 involved_in
acts_upstream_of_or_within
ISO (MGI:5529149|PMID:23078545)
(MGI:5476853|PMID:23439682)
CACAO
MGI
PMID:23078545 PMID:23439682 MGI:5476853 MGI:5529149 NCBI chrNW_004936528:7,847,156...7,891,585 JBrowse link
G Bad BCL2 associated agonist of cell death involved_in ISO (MGI:3778846|PMID:18223655) UniProt PMID:18223655 MGI:3778846 NCBI chrNW_004936599:4,924,349...4,933,683 JBrowse link
alanyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aars1 alanyl-tRNA synthetase 1 involved_in
acts_upstream_of_or_within
ISO (MGI:5905209|PMID:27622773)
(MGI:3640843|PMID:16906134)
(PMID:27622773), (PMID:28493438)
RGD
UniProt
MGI
PMID:2040280 PMID:16906134 PMID:27622773 PMID:28493438 MGI:3640843 MGI:5905209 RGD:2302982 NCBI chrNW_004936475:23,268,613...23,294,236 JBrowse link
aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1h calcium voltage-gated channel subunit alpha1 H involved_in ISO (PMID:19342457) UniProt PMID:19342457 RGD:4891166 NCBI chrNW_004936694:2,702,224...2,724,574 JBrowse link
aldosterone metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scnn1b sodium channel epithelial 1 subunit beta acts_upstream_of_or_within ISO (MGI:6478095|PMID:28567665) MGI PMID:28567665 MGI:6478095 NCBI chrNW_004936501:8,021,090...8,065,245 JBrowse link
amino acid activation for nonribosomal peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aasdh aminoadipate-semialdehyde dehydrogenase acts_upstream_of_or_within ISO (MGI:5630050|PMID:24467666) MGI PMID:24467666 MGI:5630050 NCBI chrNW_004936482:18,558,789...18,591,709 JBrowse link
ammonia assimilation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asl argininosuccinate lyase acts_upstream_of_or_within ISO (MGI:3604426|PMID:12559843) MGI PMID:12559843 MGI:3604426 NCBI chrNW_004936543:7,688,788...7,699,842 JBrowse link
G Glul glutamate-ammonia ligase ISO RGD PMID:28323 RGD:2301547 NCBI chrNW_004936481:7,293,301...7,301,416 JBrowse link
AMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adsl adenylosuccinate lyase involved_in ISO (PMID:11428554) RGD
UniProt
PMID:3759987 PMID:11428554 RGD:5135303 NCBI chrNW_004936492:1,423,780...1,440,825 JBrowse link
G Adss1 adenylosuccinate synthase 1 involved_in ISO (PMID:15786719) UniProt PMID:15786719 NCBI chrNW_004936621:655,004...667,608 JBrowse link
G Adss2 adenylosuccinate synthase 2 involved_in
acts_upstream_of_or_within
ISO (PMID:2004783)
(MGI:64874|PMID:8308018)
UniProt
MGI
PMID:2004783 PMID:8308018 MGI:64874 NCBI chrNW_004936526:6,342,233...6,380,736 JBrowse link
G Prps1 phosphoribosyl pyrophosphate synthetase 1 ISO RGD PMID:2546925 RGD:5134985 NCBI chrNW_004936499:7,114,838...7,136,468 JBrowse link
G Prps2 phosphoribosyl pyrophosphate synthetase 2 ISO RGD PMID:2546925 RGD:5134985 NCBI chrNW_004936470:2,547,038...2,576,951 JBrowse link
AMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in ISO (MGI:6478860|PMID:8064675) MGI PMID:8064675 MGI:6478860 NCBI chrNW_004936530:2,217,713...2,224,070 JBrowse link
G Ampd3 adenosine monophosphate deaminase 3 involved_in ISO (MGI:5917829|PMID:28746349) MGI PMID:28746349 MGI:5917829 NCBI chrNW_004936528:7,847,156...7,891,585 JBrowse link
G Nt5c1b 5'-nucleotidase, cytosolic IB involved_in ISO (MGI:2153435|PMID:11690631) MGI PMID:11690631 MGI:2153435 NCBI chrNW_004936493:12,520,480...12,547,394 JBrowse link
G Nt5e 5'-nucleotidase ecto acts_upstream_of_or_within
involved_in
ISO (MGI:3770326|PMID:16547283)
(MGI:5917829|PMID:28746349)
(MGI:6478084|PMID:20430891)
RGD
MGI
PMID:16547283 PMID:20430891 PMID:21414400 PMID:28746349 MGI:3770326 MGI:5917829 MGI:6478084 RGD:5134346 NCBI chrNW_004936510:5,797,218...5,846,118 JBrowse link
G Xdh xanthine dehydrogenase involved_in ISO (MGI:6478860|PMID:8064675) MGI PMID:8064675 MGI:6478860 NCBI chrNW_004936493:1,762,814...1,824,501 JBrowse link
AMP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak1 adenylate kinase 1 ISO RGD PMID:19049516 RGD:5134369 NCBI chrNW_004936487:15,507,663...15,517,401 JBrowse link
G Ak2 adenylate kinase 2 ISO RGD PMID:5010295 RGD:5490216 NCBI chrNW_004936474:15,887,014...15,908,522 JBrowse link
G Ak3 adenylate kinase 3 involved_in ISO (PMID:11485571) BHF-UCL PMID:11485571 NCBI chrNW_004936503:497,391...517,011 JBrowse link
G Ak4 adenylate kinase 4 involved_in ISO (PMID:19766732) BHF-UCL PMID:19766732 NCBI chrNW_004936692:2,593,409...2,654,583 JBrowse link
G Ampd2 adenosine monophosphate deaminase 2 involved_in ISO (MGI:5489878|PMID:22212473) CACAO PMID:22212473 MGI:5489878 NCBI chrNW_004936704:1,092,180...1,111,722 JBrowse link
G Ampd3 adenosine monophosphate deaminase 3 involved_in
acts_upstream_of_or_within
ISO (MGI:5529149|PMID:23078545)
(MGI:5476853|PMID:23439682)
CACAO
MGI
PMID:23078545 PMID:23439682 MGI:5476853 MGI:5529149 NCBI chrNW_004936528:7,847,156...7,891,585 JBrowse link
AMP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak3 adenylate kinase 3 ISO RGD PMID:5484813 RGD:2301093 NCBI chrNW_004936503:497,391...517,011 JBrowse link
G Ak9 adenylate kinase 9 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chrNW_004936564:5,610,445...5,727,782 JBrowse link
anthranilate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kynu kynureninase involved_in ISO (PMID:11985583) UniProt PMID:11985583 NCBI chrNW_004936469:33,632,885...33,805,158 JBrowse link
arachidonic acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox12b arachidonate 12-lipoxygenase, 12R type involved_in ISO (PMID:15629692)
(MGI:3608217|PMID:16129665)
(MGI:1313249|PMID:10100631), (MGI:6316908|PMID:11256953)
PMID:23382512
UniProt PMID:10100631 PMID:11256953 PMID:15629692 PMID:16129665 PMID:23382512 MGI:1313249 MGI:3608217 MGI:6316908 RGD:8554649 NCBI chrNW_004936595:1,310,556...1,321,974 JBrowse link
G Alox15 arachidonate 15-lipoxygenase involved_in ISO (MGI:1101294|PMID:8798642)
(MGI:66203|PMID:8188678)
(PMID:17052953), (PMID:1944593), (PMID:24282679), (PMID:8334154)
PMID:23382512
RGD
UniProt
PMID:1944593 PMID:8117750 PMID:8188678 PMID:8334154 PMID:8798642 PMID:17052953 PMID:23382512 PMID:24282679 MGI:1101294 MGI:66203 RGD:70288 RGD:8554649 NCBI chrNW_004936677:3,232,183...3,241,307 JBrowse link
G Alox15b arachidonate 15-lipoxygenase type B involved_in ISO (PMID:10542053), (PMID:10625675), (PMID:24282679), (PMID:24497644), (PMID:27145229), (PMID:9177185)
(MGI:1097306|PMID:9305900)
PMID:23382512
UniProt PMID:9177185 PMID:9305900 PMID:10542053 PMID:10625675 PMID:23382512 PMID:24282679 PMID:24497644 PMID:27145229 MGI:1097306 RGD:8554649 NCBI chrNW_004936595:1,279,944...1,288,321 JBrowse link
G Aloxe3 arachidonate lipoxygenase 3 involved_in ISO (PMID:12881489), (PMID:17045234)
(MGI:3694035|PMID:17045234)
PMID:23382512
UniProt PMID:12881489 PMID:17045234 PMID:23382512 MGI:3694035 RGD:8554649 NCBI chrNW_004936595:1,329,492...1,350,914 JBrowse link
G Dagla diacylglycerol lipase alpha involved_in
acts_upstream_of_or_within
ISO (PMID:14610053)
(MGI:4437165|PMID:20147530)
(MGI:6423248|PMID:17584991)
UniProt
MGI
PMID:14610053 PMID:17584991 PMID:20147530 MGI:4437165 MGI:6423248 NCBI chrNW_004936581:1,371,292...1,430,699 JBrowse link
G Daglb diacylglycerol lipase beta involved_in
acts_upstream_of_or_within
ISO (PMID:14610053)
(MGI:4437165|PMID:20147530)
(MGI:6414691|PMID:23103940)
UniProt
MGI
PMID:14610053 PMID:20147530 PMID:23103940 MGI:4437165 MGI:6414691 NCBI chrNW_004936750:17,411...105,436 JBrowse link
G Ephx1 epoxide hydrolase 1 involved_in ISO (PMID:24958911) UniProt PMID:24958911 NCBI chrNW_004936526:2,589,254...2,652,831 JBrowse link
G Fads1 fatty acid desaturase 1 ISO RGD PMID:11414679 RGD:632758 NCBI chrNW_004936581:1,312,199...1,327,046 JBrowse link
G Gpx1 glutathione peroxidase 1 involved_in ISO (PMID:11115402)
(MGI:893248|PMID:9195979)
UniProt PMID:9195979 PMID:11115402 MGI:893248 NCBI chrNW_004936529:997,943...999,123 JBrowse link
G Gpx4 glutathione peroxidase 4 involved_in ISO (PMID:11115402) UniProt PMID:11115402 NCBI chrNW_004936588:506,101...508,469 JBrowse link
G LOC101961588 cytochrome P450 2D17 ISO RGD PMID:10945868 RGD:1599723 NCBI chrNW_004936718:153,340...157,966 JBrowse link
G LOC101970101 cytochrome P450 1B1 involved_in ISO (PMID:15258110)
(MGI:5572883|PMID:15258110)
UniProt PMID:15258110 MGI:5572883 NCBI chrNW_004936663:345,021...355,188 JBrowse link
G LOC101975825 group IIF secretory phospholipase A2 involved_in ISO (MGI:6467677|PMID:11877435) UniProt PMID:11877435 MGI:6467677 NCBI chrNW_004936474:6,186,604...6,192,621 JBrowse link
G Mapk3 mitogen-activated protein kinase 3 ISO RGD PMID:15027896 RGD:1626220 NCBI chrNW_004936501:12,342,670...12,390,650 JBrowse link
G Mgll monoglyceride lipase involved_in ISO (MGI:4836780|PMID:20729846) UniProt PMID:20729846 MGI:4836780 NCBI chrNW_004936798:681,549...721,645 JBrowse link
G Pla2g4a phospholipase A2 group IVA involved_in ISO (PMID:7794891) RGD
UniProt
PMID:7794891 PMID:16603549 RGD:1642459 NCBI chrNW_004936481:3,559,377...3,689,797 JBrowse link
G Pnpla8 patatin like phospholipase domain containing 8 involved_in ISO (PMID:10833412), (PMID:15695510) UniProt PMID:10833412 PMID:15695510 NCBI chrNW_004936653:1,470,314...1,499,813 JBrowse link
arginine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ass1 argininosuccinate synthase 1 involved_in ISO PMID:19491403
(PMID:18473344), (PMID:27287393), (PMID:8792870)
RGD
UniProt
PMID:8792870 PMID:12470967 PMID:18473344 PMID:19491403 PMID:27287393 RGD:12859071 RGD:631755 NCBI chrNW_004936487:17,482,307...17,527,407 JBrowse link
arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddah1 dimethylarginine dimethylaminohydrolase 1 involved_in ISO (PMID:24895913) BHF-UCL PMID:24895913 NCBI chrNW_004936608:262,653...397,753 JBrowse link
G Fah fumarylacetoacetate hydrolase acts_upstream_of_or_within ISO (MGI:1929783|PMID:11209059) MGI PMID:11209059 MGI:1929783 NCBI chrNW_004936471:38,140,324...38,174,472 JBrowse link
G Nos1 nitric oxide synthase 1 involved_in ISO PMID:1383204 BHF-UCL PMID:1383204 RGD:8553334 NCBI chrNW_004936558:5,162,471...5,302,488 JBrowse link
G Nos2 nitric oxide synthase 2 involved_in ISO (PMID:7504305)
(MGI:3807772|PMID:1383204)
BHF-UCL PMID:1383204 PMID:7504305 MGI:3807772 NCBI chrNW_004936538:4,052,277...4,097,051 JBrowse link
G Nos3 nitric oxide synthase 3 involved_in ISO (PMID:1378832), (PMID:7488039) BHF-UCL PMID:1378832 PMID:7488039 NCBI chrNW_004936527:6,427,147...6,445,770 JBrowse link
arginine catabolic process to ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg2 arginase 2 ISO RGD PMID:15753084 RGD:8693655 NCBI chrNW_004936495:11,004,296...11,045,467 JBrowse link
arginine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg2 arginase 2 ISO RGD PMID:16537391 RGD:1582129 NCBI chrNW_004936495:11,004,296...11,045,467 JBrowse link
G Ddah1 dimethylarginine dimethylaminohydrolase 1 ISO RGD PMID:17322279 RGD:1625578 NCBI chrNW_004936608:262,653...397,753 JBrowse link
G Ddah2 dimethylarginine dimethylaminohydrolase 2 ISO RGD PMID:17322279 RGD:1625578 NCBI chrNW_004936727:1,803,711...1,807,441 JBrowse link
G Slc39a8 solute carrier family 39 member 8 acts_upstream_of ISO (MGI:5912781|PMID:28481222) UniProt PMID:28481222 MGI:5912781 NCBI chrNW_004936520:961,376...1,036,801 JBrowse link
argininosuccinate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asl argininosuccinate lyase ISO RGD PMID:4062872 PMID:8586639 RGD:1599287 RGD:2300098 NCBI chrNW_004936543:7,688,788...7,699,842 JBrowse link
G Ass1 argininosuccinate synthase 1 involved_in ISO (PMID:7977368) RGD
BHF-UCL
PMID:4062872 PMID:7977368 RGD:2300098 NCBI chrNW_004936487:17,482,307...17,527,407 JBrowse link
arginyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rars1 arginyl-tRNA synthetase 1 involved_in ISO (MGI:3055639|PMID:12060739)
(PMID:25288775)
RGD
CAFA
UniProt
PMID:7082655 PMID:12060739 PMID:25288775 MGI:3055639 RGD:2303394 NCBI chrNW_004936622:884,324...917,964 JBrowse link
arsonoacetate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G As3mt arsenite methyltransferase involved_in ISO PMID:11790780
(PMID:25997655)
UniProt PMID:11790780 PMID:25997655 RGD:625365 NCBI chrNW_004936600:3,050,946...3,069,786 JBrowse link
G N6amt1 N-6 adenine-specific DNA methyltransferase 1 involved_in ISO (PMID:25997655) UniProt PMID:25997655 NCBI chrNW_004936500:13,086,873...13,099,814 JBrowse link
asparagine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asns asparagine synthetase (glutamine-hydrolyzing) ISO RGD PMID:2887559 RGD:2316002 NCBI chrNW_004936585:2,834,202...2,854,740 JBrowse link
asparagine catabolic process via L-aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asrgl1 asparaginase and isoaspartyl peptidase 1 involved_in ISO (PMID:19839645)
PMID:12753071
UniProt PMID:12753071 PMID:19839645 RGD:1299508 NCBI chrNW_004936581:823,665...847,579 JBrowse link
asparagine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aspg asparaginase involved_in ISO PMID:9575212 UniProt PMID:9575212 RGD:1299414 NCBI chrNW_004936621:1,140,651...1,163,608 JBrowse link
G Nit2 nitrilase family member 2 involved_in ISO (PMID:22674578) BHF-UCL PMID:22674578 NCBI chrNW_004936630:2,944,447...2,963,339 JBrowse link
asparaginyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nars1 asparaginyl-tRNA synthetase 1 involved_in ISO (PMID:9421509) UniProt PMID:9421509 NCBI chrNW_004936497:6,727,676...6,745,187 JBrowse link
aspartate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Got1 glutamic-oxaloacetic transaminase 1 acts_upstream_of_or_within ISO (MGI:53641|PMID:4193185) MGI PMID:4193185 MGI:53641 NCBI chrNW_004936636:617,376...640,424 JBrowse link
aspartate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddo D-aspartate oxidase involved_in ISO (PMID:9163533) UniProt PMID:9163533 NCBI chrNW_004936564:6,280,890...6,299,838 JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1 involved_in ISO (PMID:2241899) UniProt PMID:2241899 NCBI chrNW_004936636:617,376...640,424 JBrowse link
aspartate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adss1 adenylosuccinate synthase 1 ISO RGD PMID:3759987 RGD:5135303 NCBI chrNW_004936621:655,004...667,608 JBrowse link
G Adss2 adenylosuccinate synthase 2 ISO RGD PMID:71897 RGD:5135533 NCBI chrNW_004936526:6,342,233...6,380,736 JBrowse link
G Ass1 argininosuccinate synthase 1 involved_in ISO (PMID:7977368) BHF-UCL PMID:7977368 NCBI chrNW_004936487:17,482,307...17,527,407 JBrowse link
G Ddo D-aspartate oxidase acts_upstream_of_or_within ISO (MGI:3617951|PMID:16525061) MGI PMID:16525061 MGI:3617951 NCBI chrNW_004936564:6,280,890...6,299,838 JBrowse link
G Got1 glutamic-oxaloacetic transaminase 1 ISO RGD PMID:2837211 RGD:2289377 NCBI chrNW_004936636:617,376...640,424 JBrowse link
ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5f1a ATP synthase F1 subunit alpha involved_in ISO (PMID:21106936) CAFA PMID:21106936 NCBI chrNW_004936517:743,036...752,836 JBrowse link
G Atp5f1b ATP synthase F1 subunit beta involved_in ISO (PMID:17510399), (PMID:21106936) CAFA PMID:17510399 PMID:21106936 NCBI chrNW_004936646:951,236...958,907 JBrowse link
G Atp5mc1 ATP synthase membrane subunit c locus 1 ISO RGD PMID:22209705 RGD:13800744 NCBI chrNW_004936490:12,549,045...12,551,895 JBrowse link
G Atp5po ATP synthase peripheral stalk subunit OSCP ISO RGD PMID:7864899 RGD:14696824 NCBI chrNW_004936500:8,444,681...8,454,694 JBrowse link
G Dguok deoxyguanosine kinase ISO RGD PMID:30404003 RGD:15039296 NCBI chrNW_004936556:226,643...263,517 JBrowse link
G LOC101970352 L-lactate dehydrogenase C chain acts_upstream_of_or_within ISO (MGI:3775056|PMID:18367675) MGI PMID:18367675 MGI:3775056 NCBI chrNW_004936528:827,322...862,832 JBrowse link
G Pklr pyruvate kinase L/R ISO RGD PMID:4273555 PMID:5492954 RGD:2302789 RGD:2302790 NCBI chrNW_004936580:4,770,977...4,799,316 JBrowse link
G Pkm pyruvate kinase M1/2 ISO RGD PMID:4273555 RGD:2302790 NCBI chrNW_004936471:31,589,322...31,617,891 JBrowse link
G Slc25a13 solute carrier family 25 member 13 involved_in ISO (PMID:12851387) UniProt PMID:12851387 NCBI chrNW_004936585:4,061,297...4,215,912 JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in ISO (PMID:10513816) BHF-UCL PMID:10513816 NCBI chrNW_004936661:3,742,080...3,758,266 JBrowse link
ATP generation from ADP term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak9 adenylate kinase 9 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chrNW_004936564:5,610,445...5,727,782 JBrowse link
benzylpenicillin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc2 ATP binding cassette subfamily C member 2 ISO RGD PMID:19255943 RGD:11081014 NCBI chrNW_004936636:292,631...341,999 JBrowse link
beta-alanine biosynthetic process via 3-ureidopropionate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Upb1 beta-ureidopropionase 1 involved_in ISO (PMID:22525402), (PMID:29976570) UniProt PMID:22525402 PMID:29976570 NCBI chrNW_004936619:668,380...713,720 JBrowse link
beta-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh6a1 aldehyde dehydrogenase 6 family member A1 ISO RGD PMID:2768248 RGD:1599052 NCBI chrNW_004936488:3,320,357...3,340,463 JBrowse link
beta-alanine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aasdh aminoadipate-semialdehyde dehydrogenase acts_upstream_of_or_within ISO (MGI:5630050|PMID:24467666) MGI PMID:24467666 MGI:5630050 NCBI chrNW_004936482:18,558,789...18,591,709 JBrowse link
G Dpys dihydropyrimidinase ISO RGD PMID:8307005 RGD:1624990 NCBI chrNW_004936470:39,564,431...39,637,394 JBrowse link
G Upb1 beta-ureidopropionase 1 ISO RGD PMID:7626590 RGD:1624989 NCBI chrNW_004936619:668,380...713,720 JBrowse link
bile acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1d1 aldo-keto reductase family 1 member D1 involved_in ISO (PMID:7508385) MGI PMID:7508385 NCBI chrNW_004936592:2,486,219...2,522,796 JBrowse link
G Amacr alpha-methylacyl-CoA racemase ISO RGD PMID:11964182 RGD:704372 NCBI chrNW_004936518:7,072,436...7,088,927 JBrowse link
G Baat bile acid-CoA:amino acid N-acyltransferase involved_in ISO (PMID:12810727), (PMID:8034703) UniProt PMID:8034703 PMID:12810727 NCBI chrNW_004936524:9,536,032...9,544,901 JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within ISO (MGI:1933035|PMID:11279518) MGI PMID:11279518 MGI:1933035 NCBI chrNW_004936668:62,103...81,549 JBrowse link
G Hsd17b10 hydroxysteroid 17-beta dehydrogenase 10 involved_in ISO (PMID:12917011) UniProt PMID:12917011 NCBI chrNW_004936751:399,743...402,200 JBrowse link
G LOC101955077 cytochrome P450 7B1 involved_in ISO (MGI:1859119|PMID:10748047) UniProt PMID:10748047 MGI:1859119 NCBI chrNW_004936496:8,900,320...9,072,109 JBrowse link
G LOC101963150 sterol 26-hydroxylase, mitochondrial involved_in ISO (PMID:11412116), (PMID:9660774) UniProt PMID:9660774 PMID:11412116 NCBI chrNW_004936569:1,213,700...1,250,181 JBrowse link
G LOC101970910 cytochrome P450 7A1 involved_in ISO (PMID:19965590)
PMID:1694852
UniProt PMID:1694852 PMID:19965590 RGD:70534 NCBI chrNW_004936496:4,599,138...4,605,653 JBrowse link
G LOC101972335 24-hydroxycholesterol 7-alpha-hydroxylase involved_in ISO (PMID:10748047)
(MGI:1859119|PMID:10748047)
UniProt PMID:10748047 MGI:1859119 NCBI chrNW_004936476:13,697,598...13,819,362 JBrowse link
G LOC101977223 7-alpha-hydroxycholest-4-en-3-one 12-alpha-hydroxylase involved_in ISO (PMID:14643796)
(MGI:3588413|PMID:12393855)
UniProt PMID:12393855 PMID:14643796 MGI:3588413 NCBI chrNW_004936695:2,263,868...2,265,373 JBrowse link
G Pex2 peroxisomal biogenesis factor 2 acts_upstream_of_or_within ISO (MGI:3027293|PMID:14673138) MGI PMID:14673138 MGI:3027293 NCBI chrNW_004936702:1,573,616...1,626,323 JBrowse link
G Slc27a2 solute carrier family 27 member 2 involved_in ISO (PMID:11980911) UniProt PMID:11980911 NCBI chrNW_004936471:12,259,779...12,298,760 JBrowse link
G Slc27a5 solute carrier family 27 member 5 involved_in ISO (PMID:11980911) UniProt PMID:11980911 NCBI chrNW_004937062:90,217...98,562 JBrowse link
G Star steroidogenic acute regulatory protein ISO RGD PMID:15382124 RGD:1600081 NCBI chrNW_004936710:1,523,289...1,530,181 JBrowse link
bile acid conjugation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Baat bile acid-CoA:amino acid N-acyltransferase involved_in ISO PMID:12951368
(PMID:12810727), (PMID:2037576), (PMID:8034703)
PMID:624713
UniProt PMID:624713 PMID:2037576 PMID:8034703 PMID:12810727 PMID:12951368 RGD:14695068 RGD:2312798 NCBI chrNW_004936524:9,536,032...9,544,901 JBrowse link
bile acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb11 ATP binding cassette subfamily B member 11 involved_in ISO (PMID:20010382), (PMID:29507376)
PMID:9545351
(PMID:32203132)
UniProt PMID:9545351 PMID:20010382 PMID:29507376 PMID:32203132 RGD:728120 NCBI chrNW_004936469:10,521,576...10,599,005 JBrowse link
G Amacr alpha-methylacyl-CoA racemase involved_in ISO (PMID:10655068) RGD
UniProt
PMID:8020470 PMID:10655068 RGD:2315634 NCBI chrNW_004936518:7,072,436...7,088,927 JBrowse link
G Arv1 ARV1 homolog, fatty acid homeostasis modulator acts_upstream_of_or_within ISO (MGI:4849624|PMID:20663892) MGI PMID:20663892 MGI:4849624 NCBI chrNW_004936484:19,551,293...19,562,132 JBrowse link
G Atp8b1 ATPase phospholipid transporting 8B1 acts_upstream_of_or_within ISO (MGI:3041693|PMID:14976163) MGI PMID:14976163 MGI:3041693 NCBI chrNW_004936497:6,652,240...6,712,960 JBrowse link
G Baat bile acid-CoA:amino acid N-acyltransferase acts_upstream_of_or_within ISO (MGI:893269|PMID:9215542) MGI PMID:9215542 MGI:893269 NCBI chrNW_004936524:9,536,032...9,544,901 JBrowse link
G Gba2 glucosylceramidase beta 2 involved_in
NOT|involved_in
ISO (PMID:17105727)
(MGI:3690511|PMID:17080196)
UniProt PMID:17080196 PMID:17105727 MGI:3690511 NCBI chrNW_004936524:3,730,833...3,742,526 JBrowse link
G LOC101954950 aromatase ISO chenodeoxycholic acid RGD PMID:20026603 RGD:4890374 NCBI chrNW_004936471:13,107,603...13,136,910 JBrowse link
G LOC101968976 leptin acts_upstream_of_or_within ISO (MGI:2386518|PMID:12114517) MGI PMID:12114517 MGI:2386518 NCBI chrNW_004936479:15,394,966...15,411,334 JBrowse link
G Nr1h4 nuclear receptor subfamily 1 group H member 4 acts_upstream_of_or_within ISO (MGI:2678884|PMID:12917447) RGD
MGI
PMID:12754200 PMID:12917447 PMID:27993716 MGI:2678884 RGD:14701034 RGD:1625079 NCBI chrNW_004936492:13,315,265...13,365,186 JBrowse link
G Nr5a2 nuclear receptor subfamily 5 group A member 2 acts_upstream_of_or_within ISO (MGI:3050203|PMID:15014077) MGI PMID:15014077 MGI:3050203 NCBI chrNW_004936567:4,084,161...4,194,858 JBrowse link
G Scp2 sterol carrier protein 2 involved_in ISO PMID:9325339 UniProt PMID:9325339 RGD:21201257 NCBI chrNW_004936522:8,004,503...8,110,995 JBrowse link
G Slc27a5 solute carrier family 27 member 5 acts_upstream_of_or_within ISO (MGI:3722950|PMID:16618417) RGD
MGI
PMID:12454267 PMID:16618417 MGI:3722950 RGD:1302363 NCBI chrNW_004937062:90,217...98,562 JBrowse link
biotin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101961662 biotinidase acts_upstream_of_or_within ISO (MGI:4888153|PMID:21051254) MGI PMID:21051254 MGI:4888153 NCBI chrNW_004936473:2,787,386...2,823,014 JBrowse link
branched-chain amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcat1 branched chain amino acid transaminase 1 acts_upstream_of_or_within ISO (MGI:3027291|PMID:14755340) MGI PMID:14755340 MGI:3027291 NCBI chrNW_004936548:2,385,756...2,454,423 JBrowse link
G Bcat2 branched chain amino acid transaminase 2 acts_upstream_of_or_within ISO (MGI:3027291|PMID:14755340) RGD
MGI
PMID:11733007 PMID:14755340 MGI:3027291 RGD:1582175 NCBI chrNW_004936664:2,865,804...2,890,038 JBrowse link
G Bckdha branched chain keto acid dehydrogenase E1 subunit alpha involved_in ISO (PMID:7883996) HGNC-UCL PMID:7883996 NCBI chrNW_004936661:3,799,998...3,817,560 JBrowse link
G Bckdhb branched chain keto acid dehydrogenase E1 subunit beta involved_in ISO (PMID:2022752) HGNC-UCL PMID:2022752 NCBI chrNW_004936510:9,904,703...10,081,532 JBrowse link
G Bckdk branched chain keto acid dehydrogenase kinase involved_in ISO PMID:1377677 HGNC-UCL PMID:1377677 RGD:68712 NCBI chrNW_004936501:13,467,603...13,471,810 JBrowse link
G Ivd isovaleryl-CoA dehydrogenase involved_in ISO (PMID:7640268) UniProt PMID:7640268 NCBI chrNW_004936471:3,871,152...3,883,521 JBrowse link
G Slc25a44 solute carrier family 25 member 44 involved_in ISO (PMID:31435015)
(MGI:6359503|PMID:31435015)
UniProt PMID:31435015 MGI:6359503 NCBI chrNW_004936580:5,435,841...5,454,396 JBrowse link
branched-chain amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcat2 branched chain amino acid transaminase 2 acts_upstream_of_or_within ISO (MGI:4442298|PMID:20237068) MGI PMID:20237068 MGI:4442298 NCBI chrNW_004936664:2,865,804...2,890,038 JBrowse link
brexanolone metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hsd17b10 hydroxysteroid 17-beta dehydrogenase 10 involved_in ISO (PMID:19706438) UniProt PMID:19706438 NCBI chrNW_004936751:399,743...402,200 JBrowse link
butyrate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acads acyl-CoA dehydrogenase short chain ISO RGD PMID:3968063 RGD:2317678 NCBI chrNW_004936668:257,214...272,089 JBrowse link
butyrate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acot4 acyl-CoA thioesterase 4 NOT|involved_in ISO (PMID:16940157) HGNC-UCL PMID:16940157 NCBI chrNW_004936488:2,912,016...2,914,995 JBrowse link
butyryl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt7 nudix hydrolase 7 involved_in ISO (MGI:6450264|PMID:18799520) UniProt PMID:18799520 MGI:6450264 NCBI chrNW_004936475:26,079,298...26,095,466 JBrowse link
calcitriol biosynthetic process from calciol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101963150 sterol 26-hydroxylase, mitochondrial involved_in ISO (PMID:15465040) UniProt PMID:15465040 NCBI chrNW_004936569:1,213,700...1,250,181 JBrowse link
G LOC101972957 vitamin D 25-hydroxylase involved_in ISO (PMID:15465040), (PMID:18511070) UniProt PMID:15465040 PMID:18511070 NCBI chrNW_004936528:3,881,630...3,897,613 JBrowse link
G LOC101978323 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial involved_in ISO (PMID:15795327), (PMID:16549446), (PMID:17023519), (PMID:22862690), (PMID:9415400)
(MGI:3590419|PMID:15972816)
BHF-UCL
UniProt
PMID:9415400 PMID:15795327 PMID:15972816 PMID:16549446 PMID:17023519 PMID:22862690 MGI:3590419 NCBI chrNW_004936646:1,899,686...1,904,104 JBrowse link
cAMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy1 adenylate cyclase 1 ISO RGD PMID:14985420 RGD:2312640 NCBI chrNW_004936478:20,310,509...20,477,506 JBrowse link
G Adcy10 adenylate cyclase 10 involved_in ISO (PMID:12609998), (PMID:15659711) RGD
UniProt
PMID:7225326 PMID:9874775 PMID:12609998 PMID:15659711 PMID:16627466 PMID:16964251 RGD:1299450 RGD:2313171 RGD:2313173 RGD:2313177 NCBI chrNW_004936481:18,274,158...18,330,136 JBrowse link
G Adcy2 adenylate cyclase 2 involved_in ISO PMID:18164588
PMID:10427002
RGD
BHF-UCL
UniProt
PMID:10427002 PMID:11738086 PMID:12711600 PMID:18164588 RGD:10400857 RGD:2312641 RGD:2312674 RGD:8553431 NCBI chrNW_004936643:47,830...338,891 JBrowse link
G Adcy3 adenylate cyclase 3 involved_in ISO (MGI:1889935|PMID:11055432)
PMID:24363043
RGD
UniProt
PMID:11055432 PMID:12711600 PMID:24363043 MGI:1889935 RGD:10400870 RGD:2312674 NCBI chrNW_004936493:7,250,194...7,333,433 JBrowse link
G Adcy4 adenylate cyclase 4 involved_in ISO PMID:8900209 RGD
BHF-UCL
PMID:8900209 PMID:11738086 PMID:12711600 RGD:2312641 RGD:2312674 RGD:8554340 NCBI chrNW_004936722:213,916...230,802 JBrowse link
G Adcy5 adenylate cyclase 5 involved_in ISO (PMID:15385642), (PMID:24700542)
(PMID:24740569)
RGD
UniProt
PMID:10894801 PMID:11738086 PMID:12711600 PMID:15385642 PMID:24700542 PMID:24740569 RGD:2312641 RGD:2312674 RGD:2315006 NCBI chrNW_004936725:1,751,272...1,897,937 JBrowse link
G Adcy6 adenylate cyclase 6 involved_in ISO (MGI:4457984|PMID:20466003)
(PMID:17916776), (PMID:18403039)
RGD
UniProt
PMID:10866989 PMID:10894801 PMID:11738086 PMID:12711600 PMID:15579502 PMID:15961389 PMID:17916776 PMID:18403039 PMID:18971210 PMID:20466003 MGI:4457984 RGD:1598749 RGD:2312641 RGD:2312654 RGD:2312674 RGD:2312678 RGD:2313211 RGD:2315006 NCBI chrNW_004936512:6,612,708...6,629,202 JBrowse link
G Adcy7 adenylate cyclase 7 involved_in ISO (PMID:11113152), (PMID:17760784) RGD
UniProt
PMID:11113152 PMID:12711600 PMID:17760784 RGD:2312674 NCBI chrNW_004936475:3,368,069...3,393,306 JBrowse link
G Adcy8 adenylate cyclase 8 ISO RGD PMID:16741924 PMID:19305019 PMID:19444869 RGD:2312769 RGD:2312785 RGD:7241269 NCBI chrNW_004936470:17,831,644...18,047,868 JBrowse link
G Adcy9 adenylate cyclase 9 acts_upstream_of_or_within
involved_in
ISO (MGI:76465|PMID:7575502), (MGI:80863|PMID:8662814)
(PMID:10987815), (PMID:9628827)
RGD
MGI
UniProt
PMID:7575502 PMID:8662814 PMID:9628827 PMID:10987815 PMID:19444869 MGI:76465 MGI:80863 RGD:2312785 NCBI chrNW_004936694:336,269...449,490 JBrowse link
cAMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde4d phosphodiesterase 4D involved_in ISO (PMID:20819076) BHF-UCL PMID:20819076 NCBI chrNW_004936480:8,123,437...9,235,586 JBrowse link
cAMP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 acts_upstream_of_or_within ISO (MGI:76872|PMID:7595494) MGI PMID:7595494 MGI:76872 NCBI chrNW_004936469:25,494,820...25,745,783 JBrowse link
G Epha2 EPH receptor A2 involved_in ISO (PMID:27385333) UniProt PMID:27385333 NCBI chrNW_004936474:3,648,395...3,673,856 JBrowse link
canonical glycolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eno1 enolase 1 involved_in ISO (PMID:3529090)
PMID:15041191
(PMID:29775581)
CAFA
UniProt
PMID:3529090 PMID:15041191 PMID:29775581 RGD:2302788 NCBI chrNW_004936623:3,115,357...3,130,289 JBrowse link
G Eno2 enolase 2 involved_in ISO PMID:15041191 CAFA PMID:15041191 RGD:2302788 NCBI chrNW_004936709:904,647...913,445 JBrowse link
G Foxk1 forkhead box K1 acts_upstream_of ISO (PMID:30700909) UniProt PMID:30700909 NCBI chrNW_004936765:1,126,168...1,255,354 JBrowse link
G Foxk2 forkhead box K2 acts_upstream_of ISO (MGI:6281052|PMID:30700909) UniProt PMID:30700909 MGI:6281052 NCBI chrNW_004936923:109,973...166,952 JBrowse link
G Pfkm phosphofructokinase, muscle acts_upstream_of_or_within ISO (MGI:4356361|PMID:19696889) MGI PMID:19696889 MGI:4356361 NCBI chrNW_004936512:6,006,247...6,031,939 JBrowse link
carboxylic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pon1 paraoxonase 1 involved_in ISO (PMID:7638166) BHF-UCL PMID:7638166 NCBI chrNW_004936585:4,954,871...4,979,560 JBrowse link
G Pon3 paraoxonase 3 involved_in ISO (PMID:15772423) BHF-UCL PMID:15772423 NCBI chrNW_004936585:4,902,430...4,928,377 JBrowse link
carboxylic acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il1rn interleukin 1 receptor antagonist ISO kainic acid RGD PMID:9685640 RGD:7174732 NCBI chrNW_004936783:1,447,158...1,466,331 JBrowse link
G Mcfd2 multiple coagulation factor deficiency 2, ER cargo receptor complex subunit involved_in ISO PMID:12832409 MGI PMID:12832409 RGD:724668 NCBI chrNW_004936508:5,392,275...5,419,267 JBrowse link
G Mif macrophage migration inhibitory factor involved_in ISO (PMID:12782713) BHF-UCL PMID:12782713 NCBI chrNW_004936619:1,207,058...1,208,010 JBrowse link
carnosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Carns1 carnosine synthase 1 acts_upstream_of_or_within
involved_in
ISO (MGI:4457482|PMID:20097752), (MGI:5607487|PMID:24891507)
(PMID:20097752)
MGI
UniProt
PMID:20097752 PMID:24891507 MGI:4457482 MGI:5607487 NCBI chrNW_004936599:2,322,797...2,331,604 JBrowse link
carnosine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Carnmt1 carnosine N-methyltransferase 1 involved_in ISO (PMID:29463897)
PMID:26001783
(PMID:26001783)
UniProt PMID:26001783 PMID:29463897 RGD:10047234 NCBI chrNW_004936503:10,725,069...10,785,409 JBrowse link
CDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 ISO RGD PMID:3010881 RGD:5133253 NCBI chrNW_004936474:28,147,459...28,180,779 JBrowse link
CDP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak9 adenylate kinase 9 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chrNW_004936564:5,610,445...5,727,782 JBrowse link
cellular amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asl argininosuccinate lyase acts_upstream_of_or_within ISO (MGI:3604426|PMID:12559843) MGI PMID:12559843 MGI:3604426 NCBI chrNW_004936543:7,688,788...7,699,842 JBrowse link
G Asns asparagine synthetase (glutamine-hydrolyzing) ISO RGD PMID:7818476 RGD:1298553 NCBI chrNW_004936585:2,834,202...2,854,740 JBrowse link
G Dio1 iodothyronine deiodinase 1 involved_in ISO (PMID:26305885) ARUK-UCL PMID:26305885 NCBI chrNW_004936522:7,234,270...7,250,263 JBrowse link
G Ggt1 gamma-glutamyltransferase 1 involved_in ISO (PMID:14754911) UniProt PMID:14754911 NCBI chrNW_004936619:762,278...791,610 JBrowse link
G Ggt5 gamma-glutamyltransferase 5 involved_in ISO (PMID:1676842) UniProt PMID:1676842 NCBI chrNW_004936619:794,876...837,748 JBrowse link
G Hgd homogentisate 1,2-dioxygenase acts_upstream_of_or_within ISO (MGI:64581|PMID:8188247) MGI PMID:8188247 MGI:64581 NCBI chrNW_004936536:7,314,548...7,359,426 JBrowse link
G Kyat3 kynurenine aminotransferase 3 involved_in ISO (MGI:3835225|PMID:19029248) UniProt PMID:19029248 MGI:3835225 NCBI chrNW_004936732:77,427...125,816 JBrowse link
G Pm20d1 peptidase M20 domain containing 1 involved_in ISO (PMID:27374330)
(MGI:5796058|PMID:27374330)
UniProt PMID:27374330 MGI:5796058 NCBI chrNW_004936557:6,610,862...6,631,220 JBrowse link
G Slc16a2 solute carrier family 16 member 2 acts_upstream_of ISO (PMID:26305885) ARUK-UCL PMID:26305885 NCBI chrNW_004936683:803,186...910,143 JBrowse link
G Tat tyrosine aminotransferase ISO RGD PMID:12717026 RGD:1582407 NCBI chrNW_004936475:22,190,282...22,199,398 JBrowse link
cellular detoxification of methylglyoxal term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Park7 Parkinsonism associated deglycase involved_in ISO (PMID:28993701) UniProt PMID:28993701 NCBI chrNW_004936623:2,422,780...2,436,817 JBrowse link
cellular ketone body metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oxct1 3-oxoacid CoA-transferase 1 acts_upstream_of_or_within
involved_in
ISO (MGI:2664113|PMID:12534938)
(PMID:9671268)
RGD
MGI
UniProt
PMID:3860190 PMID:9671268 PMID:12534938 MGI:2664113 RGD:2326212 NCBI chrNW_004936518:924,840...1,057,201 JBrowse link
cellular ketone metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nmt1 N-myristoyltransferase 1 involved_in ISO (PMID:22865860) BHF-UCL PMID:22865860 NCBI chrNW_004936541:1,391,133...1,424,148 JBrowse link
cGMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gucy1a1 guanylate cyclase 1 soluble subunit alpha 1 involved_in
acts_upstream_of_or_within
ISO (PMID:23505436)
(MGI:3640061|PMID:16614755)
UniProt
MGI
PMID:16614755 PMID:23505436 MGI:3640061 NCBI chrNW_004936576:2,353,874...2,411,747 JBrowse link
G Gucy1b1 guanylate cyclase 1 soluble subunit beta 1 involved_in ISO (PMID:23505436) UniProt PMID:23505436 NCBI chrNW_004936576:2,427,451...2,469,946 JBrowse link
G Gucy2d guanylate cyclase 2D, retinal involved_in ISO (MGI:5049799|PMID:21598940) UniProt PMID:21598940 MGI:5049799 NCBI chrNW_004936595:1,235,747...1,250,294 JBrowse link
G Nppa natriuretic peptide A acts_upstream_of ISO (PMID:1672777) GO_Central PMID:1672777 NCBI chrNW_004936474:671,362...673,610 JBrowse link
G Nppb natriuretic peptide B acts_upstream_of ISO (PMID:1672777) GO_Central PMID:1672777 NCBI chrNW_004936474:683,325...684,662 JBrowse link
G Nppc natriuretic peptide C acts_upstream_of ISO (PMID:1672777)
(MGI:2177134|PMID:11259675)
GO_Central PMID:1672777 PMID:11259675 MGI:2177134 NCBI chrNW_004936525:5,092,675...5,099,344 JBrowse link
G Npr1 natriuretic peptide receptor 1 involved_in ISO (PMID:1672777) GO_Central PMID:1672777 NCBI chrNW_004936580:3,479,858...3,496,896 JBrowse link
G Npr2 natriuretic peptide receptor 2 acts_upstream_of ISO (PMID:1672777) GO_Central PMID:1672777 NCBI chrNW_004936524:3,779,398...3,798,074 JBrowse link
cGMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde1a phosphodiesterase 1A ISO RGD PMID:16514069 RGD:2312521 NCBI chrNW_004936509:10,819,067...11,142,964 JBrowse link
G Pde2a phosphodiesterase 2A involved_in ISO (PMID:19828435)
(MGI:4420377|PMID:19632989)
UniProt PMID:19632989 PMID:19828435 MGI:4420377 NCBI chrNW_004936498:1,856,256...1,944,405 JBrowse link
G Pde5a phosphodiesterase 5A acts_upstream_of_or_within ISO (MGI:2450821|PMID:12554648) MGI PMID:12554648 MGI:2450821 NCBI chrNW_004936869:24,265...117,120 JBrowse link
G Pde9a phosphodiesterase 9A involved_in ISO (PMID:25799991)
(MGI:1266874|PMID:9624145)
(MGI:5634842|PMID:25799991)
UniProt PMID:9624145 PMID:25799991 MGI:1266874 MGI:5634842 NCBI chrNW_004936500:1,201,843...1,266,818 JBrowse link
cGMP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (MGI:66348|PMID:7518067), (MGI:68066|PMID:3038581) MGI PMID:3038581 PMID:7518067 MGI:66348 MGI:68066 NCBI chrNW_004936602:2,744,757...3,011,051 JBrowse link
G Pde5a phosphodiesterase 5A acts_upstream_of_or_within ISO (MGI:4361111|PMID:19474061), (MGI:4834094|PMID:20511540) MGI PMID:19474061 PMID:20511540 MGI:4361111 MGI:4834094 NCBI chrNW_004936869:24,265...117,120 JBrowse link
G Pde9a phosphodiesterase 9A involved_in ISO (PMID:9624146) UniProt PMID:9624146 NCBI chrNW_004936500:1,201,843...1,266,818 JBrowse link
G Rora RAR related orphan receptor A acts_upstream_of_or_within ISO (MGI:66348|PMID:7518067) MGI PMID:7518067 MGI:66348 NCBI chrNW_004936471:21,402,056...21,567,908 JBrowse link
cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa1 apolipoprotein A1 acts_upstream_of_or_within ISO (MGI:2180727|PMID:8647961) MGI PMID:8647961 MGI:2180727 NCBI chrNW_004936542:2,111,055...2,112,626 JBrowse link
G Cftr CF transmembrane conductance regulator acts_upstream_of_or_within ISO (MGI:3709533|PMID:17085523) MGI PMID:17085523 MGI:3709533 NCBI chrNW_004936589:1,565,933...1,719,208 JBrowse link
G Dhcr24 24-dehydrocholesterol reductase acts_upstream_of_or_within ISO (MGI:2686848|PMID:14684813), (MGI:3624168|PMID:16321981), (MGI:3769949|PMID:16513830) MGI PMID:14684813 PMID:16321981 PMID:16513830 MGI:2686848 MGI:3624168 MGI:3769949 NCBI chrNW_004936522:6,423,561...6,447,363 JBrowse link
G Fdft1 farnesyl-diphosphate farnesyltransferase 1 ISO RGD PMID:16440058 RGD:1626611 NCBI chrNW_004936628:3,599,435...3,600,061 JBrowse link
G G6pd glucose-6-phosphate dehydrogenase involved_in ISO (PMID:12027950) BHF-UCL PMID:12027950 NCBI chrNW_004936809:1,269,900...1,285,853 JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase acts_upstream_of_or_within
involved_in
ISO (MGI:2180727|PMID:8647961), (MGI:3603484|PMID:15845870), (MGI:70238|PMID:7798939)
(PMID:23063590)
RGD
MGI
CACAO
PMID:7798939 PMID:8647961 PMID:12841361 PMID:15845870 PMID:23063590 MGI:2180727 MGI:3603484 MGI:70238 RGD:1300058 NCBI chrNW_004936549:1,378,536...1,400,501 JBrowse link
G Hsd17b7 hydroxysteroid 17-beta dehydrogenase 7 involved_in
acts_upstream_of_or_within
ISO (PMID:12829805)
(MGI:2673751|PMID:12829805)
UniProt
MGI
PMID:12829805 MGI:2673751 NCBI chrNW_004936831:951,603...976,159 JBrowse link
G Insig1 insulin induced gene 1 involved_in
acts_upstream_of_or_within
ISO (PMID:32322062)
(MGI:3689278|PMID:16955138)
UniProt
MGI
PMID:16955138 PMID:32322062 MGI:3689278 NCBI chrNW_004936527:9,684,304...9,696,951 JBrowse link
G Insig2 insulin induced gene 2 involved_in
acts_upstream_of_or_within
ISO (PMID:32322062)
(MGI:3689278|PMID:16955138)
UniProt
MGI
PMID:16955138 PMID:32322062 MGI:3689278 NCBI chrNW_004936469:52,120,063...52,140,646 JBrowse link
G Lbr lamin B receptor involved_in ISO (PMID:27336722)
(MGI:3822946|PMID:18785926)
(MGI:5308142|PMID:22140257)
(PMID:16784888)
UniProt PMID:16784888 PMID:18785926 PMID:22140257 PMID:27336722 MGI:3822946 MGI:5308142 NCBI chrNW_004936526:2,254,463...2,282,785 JBrowse link
G LOC101964999 EBP cholestenol delta-isomerase involved_in ISO (PMID:9894009) RGD
UniProt
PMID:9894009 PMID:11171067 RGD:628445 NCBI chrNW_004936721:508,716...515,968 JBrowse link
G LOC101971285 7-dehydrocholesterol reductase involved_in ISO (PMID:9465114) RGD
UniProt
PMID:9465114 PMID:9831636 PMID:10329655 RGD:2316918 RGD:632010 NCBI chrNW_004936794:1,432,379...1,468,966 JBrowse link
G Lss lanosterol synthase involved_in ISO PMID:7568116
(PMID:17186944)
RGD
UniProt
BHF-UCL
PMID:1429550 PMID:7568116 PMID:16440058 PMID:17186944 RGD:1626611 RGD:2316919 RGD:728996 NCBI chrNW_004936778:323,120...351,100 JBrowse link
G Mvk mevalonate kinase involved_in ISO (PMID:1377680) UniProt PMID:1377680 NCBI chrNW_004936769:1,274,595...1,295,186 JBrowse link
G Npc1l1 NPC1 like intracellular cholesterol transporter 1 involved_in ISO (PMID:17140581) HGNC-UCL PMID:17140581 NCBI chrNW_004936478:19,434,557...19,452,245 JBrowse link
G Pmvk phosphomevalonate kinase involved_in ISO (PMID:8663599) UniProt PMID:8663599 NCBI chrNW_004936580:4,473,554...4,482,396 JBrowse link
G Tm7sf2 transmembrane 7 superfamily member 2 involved_in ISO (PMID:16784888)
(MGI:3822946|PMID:18785926)
UniProt PMID:16784888 PMID:18785926 MGI:3822946 RGD:13825441 NCBI chrNW_004936599:4,253,725...4,258,198 JBrowse link
cholesterol biosynthetic process via 24,25-dihydrolanosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101955024 lanosterol 14-alpha demethylase ISO RGD PMID:7581240 RGD:2316902 NCBI chrNW_004936621:2,209,255...2,232,404 JBrowse link
cholesterol biosynthetic process via desmosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhcr24 24-dehydrocholesterol reductase involved_in ISO (PMID:11519011) UniProt PMID:11519011 NCBI chrNW_004936522:6,423,561...6,447,363 JBrowse link
cholesterol biosynthetic process via lathosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sc5d sterol-C5-desaturase ISO RGD PMID:7961720 RGD:2316911 NCBI chrNW_004936542:6,046,425...6,062,825 JBrowse link
cholesterol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1d1 aldo-keto reductase family 1 member D1 involved_in ISO (PMID:7508385) UniProt PMID:7508385 NCBI chrNW_004936592:2,486,219...2,522,796 JBrowse link
G Apoe apolipoprotein E acts_upstream_of_or_within ISO (MGI:1314982|PMID:9826706) MGI PMID:9826706 MGI:1314982 NCBI chrNW_004936706:1,512,438...1,516,805 JBrowse link
G Cel carboxyl ester lipase involved_in ISO (PMID:12031288) UniProt PMID:12031288 NCBI chrNW_004936487:19,463,219...19,472,029 JBrowse link
G Hsd3b7 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 ISO RGD PMID:16081591 RGD:1599972 NCBI chrNW_004936501:13,363,630...13,367,553 JBrowse link
G LOC101961079 cholesterol 24-hydroxylase involved_in ISO (PMID:14640697), (PMID:18621681), (PMID:25017465)
(MGI:1339884|PMID:10377398), (MGI:6393037|PMID:20193040)
UniProt PMID:10377398 PMID:14640697 PMID:18621681 PMID:20193040 PMID:25017465 MGI:1339884 MGI:6393037 NCBI chrNW_004936604:3,451,853...3,490,688 JBrowse link
G LOC101963150 sterol 26-hydroxylase, mitochondrial involved_in ISO (PMID:9660774) UniProt PMID:9660774 NCBI chrNW_004936569:1,213,700...1,250,181 JBrowse link
G LOC101970910 cytochrome P450 7A1 involved_in
acts_upstream_of_or_within
ISO PMID:1694852
(MGI:1933035|PMID:11279518), (MGI:3603484|PMID:15845870)
UniProt
MGI
PMID:1694852 PMID:11279518 PMID:15845870 MGI:1933035 MGI:3603484 RGD:70534 NCBI chrNW_004936496:4,599,138...4,605,653 JBrowse link
G LOC101972335 24-hydroxycholesterol 7-alpha-hydroxylase acts_upstream_of_or_within ISO (MGI:1859119|PMID:10748047) MGI PMID:10748047 MGI:1859119 NCBI chrNW_004936476:13,697,598...13,819,362 JBrowse link
G Mt3 metallothionein 3 involved_in ISO (MGI:4881636|PMID:20544854) UniProt PMID:20544854 MGI:4881636 NCBI chrNW_004936475:8,864,512...8,866,516 JBrowse link
G Scarb1 scavenger receptor class B member 1 acts_upstream_of_or_within ISO (MGI:1934548|PMID:11278646)
(MGI:3690692|PMID:10559220)
MGI PMID:10559220 PMID:11278646 MGI:1934548 MGI:3690692 NCBI chrNW_004936558:530,828...555,098 JBrowse link
cholesterol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 involved_in
acts_upstream_of_or_within
ISO (PMID:14747463)
(MGI:2153573|PMID:11559713)
BHF-UCL
MGI
PMID:11559713 PMID:14747463 MGI:2153573 NCBI chrNW_004936559:7,177,887...7,312,660 JBrowse link
G Abca5 ATP binding cassette subfamily A member 5 involved_in ISO (PMID:25125465) UniProt PMID:25125465 NCBI chrNW_004936541:8,467,035...8,549,893 JBrowse link
G Abcg1 ATP binding cassette subfamily G member 1 involved_in ISO (PMID:15994327) BHF-UCL PMID:15994327 NCBI chrNW_004936500:1,620,763...1,678,561 JBrowse link
G Angptl3 angiopoietin like 3 involved_in ISO (PMID:17110602) BHF-UCL PMID:17110602 NCBI chrNW_004936692:286,432...295,021 JBrowse link
G Aplp2 amyloid beta precursor like protein 2 acts_upstream_of_or_within ISO (MGI:3762423|PMID:17920016) MGI PMID:17920016 MGI:3762423 NCBI chrNW_004936572:2,205,527...2,277,786 JBrowse link
G Apoa1 apolipoprotein A1 involved_in
acts_upstream_of_or_within
ISO (PMID:15464323)
(MGI:3588626|PMID:15995171)
(MGI:1099137|PMID:9327769), (MGI:1339278|PMID:10357841), (MGI:3487338|PMID:15466405), (MGI:3688492|PMID:9795222), (MGI:3696597|PMID:17071966), (MGI:70854|PMID:7751823)
BHF-UCL
MGI
PMID:7751823 PMID:9327769 PMID:9795222 PMID:10357841 PMID:15464323 PMID:15466405 PMID:15995171 PMID:17071966 MGI:1099137 MGI:1339278 MGI:3487338 MGI:3588626 MGI:3688492 MGI:3696597 MGI:70854 NCBI chrNW_004936542:2,111,055...2,112,626 JBrowse link
G Apoa2 apolipoprotein A2 acts_upstream_of_or_within ISO (MGI:1339279|PMID:10357838)
(MGI:1339279|PMID:10357838), (MGI:2180727|PMID:8647961)
MGI PMID:8647961 PMID:10357838 MGI:1339279 MGI:2180727 NCBI chrNW_004936903:520,420...521,726 JBrowse link
G Apoa4 apolipoprotein A4 involved_in ISO (PMID:1935934) BHF-UCL PMID:1935934 NCBI chrNW_004936542:2,098,683...2,101,127 JBrowse link
G Apob apolipoprotein B involved_in ISO (PMID:2563166) BHF-UCL PMID:2563166 NCBI chrNW_004936493:10,509,118...10,549,144 JBrowse link
G Apoc1 apolipoprotein C1 acts_upstream_of_or_within ISO (MGI:70746|PMID:7848292) MGI PMID:7848292 MGI:70746 NCBI chrNW_004936706:1,519,248...1,520,102 JBrowse link
G Apoc3 apolipoprotein C3 acts_upstream_of_or_within ISO (MGI:2152463|PMID:11590213), (MGI:69667|PMID:8089130)
(MGI:82330|PMID:8864964)
MGI PMID:8089130 PMID:8864964 PMID:11590213 MGI:2152463 MGI:69667 MGI:82330 NCBI chrNW_004936542:2,106,927...2,108,412 JBrowse link
G Apoe apolipoprotein E involved_in
acts_upstream_of_or_within
ISO (PMID:9649566)
(MGI:2180727|PMID:8647961), (MGI:51330|PMID:1423598)
(PMID:3771793)
BHF-UCL
MGI
PMID:1423598 PMID:3771793 PMID:8647961 PMID:9649566 MGI:2180727 MGI:51330 NCBI chrNW_004936706:1,512,438...1,516,805 JBrowse link
G Cat catalase acts_upstream_of_or_within ISO (MGI:53683|PMID:5087482) MGI PMID:5087482 MGI:53683 NCBI chrNW_004936533:3,601,270...3,637,128 JBrowse link
G Cebpa CCAAT enhancer binding protein alpha acts_upstream_of_or_within ISO (MGI:3847596|PMID:18974039) MGI PMID:18974039 MGI:3847596 NCBI chrNW_004936570:2,513,561...2,516,213 JBrowse link
G Ch25h cholesterol 25-hydroxylase acts_upstream_of_or_within ISO (MGI:1316846|PMID:9852097) MGI PMID:9852097 MGI:1316846 NCBI chrNW_004936601:5,015,922...5,016,942 JBrowse link
G Cln6 CLN6 transmembrane ER protein involved_in ISO (PMID:16857350) UniProt PMID:16857350 NCBI chrNW_004936471:28,069,058...28,084,607 JBrowse link
G Cln8 CLN8 transmembrane ER and ERGIC protein involved_in ISO (PMID:16086686) UniProt PMID:16086686 NCBI chrNW_004936615:993,092...999,976 JBrowse link
G Dhcr24 24-dehydrocholesterol reductase acts_upstream_of_or_within ISO (MGI:3614236|PMID:16407971) MGI PMID:16407971 MGI:3614236 NCBI chrNW_004936522:6,423,561...6,447,363 JBrowse link
G Fdx1 ferredoxin 1 involved_in ISO (PMID:21636783) UniProt PMID:21636783 NCBI chrNW_004936612:3,878,179...3,905,678 JBrowse link
G Fech ferrochelatase acts_upstream_of_or_within ISO (MGI:1930023|PMID:11160364) MGI PMID:11160364 MGI:1930023 NCBI chrNW_004936497:6,755,626...6,788,568 JBrowse link
G Fgl1 fibrinogen like 1 acts_upstream_of_or_within ISO (MGI:5505372|PMID:23483972) MGI PMID:23483972 MGI:5505372 NCBI chrNW_004936614:431,537...452,174 JBrowse link
G Gba glucosylceramidase beta involved_in ISO (PMID:24211208), (PMID:26724485)
(MGI:6271235|PMID:24211208)
UniProt PMID:24211208 PMID:26724485 MGI:6271235 NCBI chrNW_004936580:4,715,869...4,720,752 JBrowse link
G Gba2 glucosylceramidase beta 2 involved_in ISO (MGI:5771619|PMID:26724485) UniProt PMID:26724485 MGI:5771619 NCBI chrNW_004936524:3,730,833...3,742,526 JBrowse link
G Hnf1a HNF1 homeobox A acts_upstream_of_or_within ISO (MGI:1933035|PMID:11279518) MGI PMID:11279518 MGI:1933035 NCBI chrNW_004936668:62,103...81,549 JBrowse link
G Insig1 insulin induced gene 1 acts_upstream_of_or_within ISO (MGI:3603108|PMID:16100574) MGI PMID:16100574 MGI:3603108 NCBI chrNW_004936527:9,684,304...9,696,951 JBrowse link
G Insig2 insulin induced gene 2 acts_upstream_of_or_within ISO (MGI:3603108|PMID:16100574) MGI PMID:16100574 MGI:3603108 NCBI chrNW_004936469:52,120,063...52,140,646 JBrowse link
G Lcat lecithin-cholesterol acyltransferase involved_in
acts_upstream_of_or_within
ISO (PMID:26195816), (PMID:4335615)
(MGI:1096057|PMID:9300780)
RGD
BHF-UCL
MGI
PMID:746355 PMID:4335615 PMID:9300780 PMID:26195816 MGI:1096057 RGD:1581789 NCBI chrNW_004936475:18,294,013...18,297,433 JBrowse link
G Ldlr low density lipoprotein receptor acts_upstream_of_or_within ISO (MGI:3696597|PMID:17071966) MGI PMID:17071966 MGI:3696597 NCBI chrNW_004936659:1,259,405...1,300,545 JBrowse link
G Lepr leptin receptor acts_upstream_of_or_within ISO (MGI:3588626|PMID:15995171) MGI PMID:15995171 MGI:3588626 NCBI chrNW_004936591:5,771,371...5,846,177 JBrowse link
G Lipc lipase C, hepatic type acts_upstream_of_or_within ISO (MGI:1339279|PMID:10357838) MGI PMID:10357838 MGI:1339279 NCBI chrNW_004936471:19,604,083...19,733,721 JBrowse link
G LOC101958515 apolipoprotein F acts_upstream_of_or_within ISO (MGI:5428098|PMID:22363685) MGI PMID:22363685 MGI:5428098 NCBI chrNW_004936646:764,689...766,265 JBrowse link
G LOC101959175 amyloid beta precursor protein acts_upstream_of_or_within ISO (MGI:3762423|PMID:17920016) MGI PMID:17920016 MGI:3762423 NCBI chrNW_004936640:1,549,977...1,787,436 JBrowse link
G LOC101963150 sterol 26-hydroxylase, mitochondrial ISO RGD PMID:2175615 RGD:1299597 NCBI chrNW_004936569:1,213,700...1,250,181 JBrowse link
G LOC101968976 leptin acts_upstream_of_or_within ISO (MGI:3588626|PMID:15995171) MGI PMID:15995171 MGI:3588626 NCBI chrNW_004936479:15,394,966...15,411,334 JBrowse link
G LOC101969174 phosphatidylcholine transfer protein acts_upstream_of_or_within ISO (MGI:3603484|PMID:15845870) MGI PMID:15845870 MGI:3603484 NCBI chrNW_004936490:6,902,959...6,929,051 JBrowse link
G LOC101970597 sulfotransferase 1C1 involved_in ISO (PMID:28992322) UniProt PMID:28992322 NCBI chrNW_004936729:1,783,124...1,796,723 JBrowse link
G LOC101970674 SREBF chaperone acts_upstream_of_or_within ISO (MGI:1934968|PMID:11358865) MGI PMID:11358865 MGI:1934968 NCBI chrNW_004936596:1,124,573...1,180,219 JBrowse link
G LOC101975820 cholesterol side-chain cleavage enzyme, mitochondrial involved_in ISO (PMID:18182448)
(PMID:21636783)
UniProt PMID:18182448 PMID:21636783 NCBI chrNW_004936471:33,367,810...33,380,764 JBrowse link
G LOC101978543 cholesteryl ester transfer protein involved_in ISO (PMID:2586614)
(PMID:2833496)
BHF-UCL PMID:2586614 PMID:2833496 NCBI chrNW_004936475:9,115,126...9,133,071 JBrowse link
G Lrp1 LDL receptor related protein 1 acts_upstream_of_or_within ISO (MGI:3762423|PMID:17920016) MGI PMID:17920016 MGI:3762423 NCBI chrNW_004936646:1,326,900...1,407,236 JBrowse link
G Lrp5 LDL receptor related protein 5 acts_upstream_of_or_within ISO (MGI:2448205|PMID:12509515) MGI PMID:12509515 MGI:2448205 NCBI chrNW_004936599:1,746,309...1,814,471 JBrowse link
G Nsdhl NAD(P) dependent steroid dehydrogenase-like acts_upstream_of_or_within ISO (MGI:1338572|PMID:10369263) MGI PMID:10369263 MGI:1338572 NCBI chrNW_004936714:246,574...273,930 JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 acts_upstream_of_or_within ISO (MGI:3710922|PMID:17242417) MGI PMID:17242417 MGI:3710922 NCBI chrNW_004936522:6,271,339...6,300,202 JBrowse link
G Pip4p1 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1 involved_in ISO (PMID:25035345) UniProt PMID:25035345 NCBI chrNW_004936877:669,407...673,004 JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO (MGI:5616959|PMID:25429154) MGI PMID:25429154 MGI:5616959 NCBI chrNW_004936724:1,747,015...1,780,298 JBrowse link
G Pon1 paraoxonase 1 acts_upstream_of_or_within ISO (MGI:1860864|PMID:9685159) MGI PMID:9685159 MGI:1860864 NCBI chrNW_004936585:4,954,871...4,979,560 JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 acts_upstream_of_or_within ISO (MGI:5320806|PMID:22383528) MGI PMID:22383528 MGI:5320806 NCBI chrNW_004936842:448,315...452,557 JBrowse link
G Soat1 sterol O-acyltransferase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:8407899)
(PMID:16647063)
(MGI:3603484|PMID:15845870)
BHF-UCL
MGI
PMID:8407899 PMID:15845870 PMID:16647063 MGI:3603484 NCBI chrNW_004936481:9,614,605...9,669,705 JBrowse link
G Soat2 sterol O-acyltransferase 2 acts_upstream_of_or_within
involved_in
ISO (MGI:1206070|PMID:9756919)
(PMID:11294643), (PMID:16647063)
RGD
MGI
BHF-UCL
PMID:9756919 PMID:11294643 PMID:12217884 PMID:16647063 MGI:1206070 RGD:625687 NCBI chrNW_004936512:10,420,847...10,430,813 JBrowse link
G Sqle squalene epoxidase ISO RGD PMID:9300786 RGD:1625701 NCBI chrNW_004936470:22,726,793...22,752,429 JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 ISO RGD PMID:18071061 RGD:1643359 NCBI chrNW_004936741:1,408,669...1,419,717 JBrowse link
G Sult2b1 sulfotransferase family 2B member 1 involved_in ISO (PMID:28575648) UniProt PMID:28575648 NCBI chrNW_004936664:2,626,810...2,655,290 JBrowse link
G Tnfsf4 TNF superfamily member 4 acts_upstream_of_or_within ISO (MGI:57200|PMID:3473481) MGI PMID:3473481 MGI:57200 NCBI chrNW_004936481:14,391,359...14,409,514 JBrowse link
G Tsku tsukushi, small leucine rich proteoglycan involved_in ISO (MGI:6407480|PMID:31391339) UniProt PMID:31391339 MGI:6407480 NCBI chrNW_004936498:5,434,912...5,487,354 JBrowse link
citrate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acly ATP citrate lyase involved_in ISO (PMID:1371749) RGD
BHF-UCL
PMID:1371749 PMID:18062843 RGD:2317315 NCBI chrNW_004936490:16,758,001...16,798,152 JBrowse link
G Aco1 aconitase 1 involved_in ISO (PMID:1281544)
(PMID:16527810), (PMID:8041788)
CAFA
UniProt
PMID:1281544 PMID:8041788 PMID:16527810 NCBI chrNW_004936524:1,081,672...1,134,971 JBrowse link
G Aco2 aconitase 2 ISO RGD PMID:9712727 PMID:14674759 RGD:2306852 RGD:2306877 NCBI chrNW_004936492:407,482...452,538 JBrowse link
G Cs citrate synthase ISO RGD PMID:818082 PMID:938457 PMID:5820645 PMID:9712727 RGD:2306824 RGD:2306825 RGD:2306828 RGD:2306877 NCBI chrNW_004936646:676,926...704,988 JBrowse link
citrulline biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase ISO RGD PMID:7053379 RGD:10755426 NCBI chrNW_004936493:5,308,268...5,332,934 JBrowse link
G LOC101975532 delta-1-pyrroline-5-carboxylate synthase involved_in ISO (PMID:11092761), (PMID:26297558) UniProt PMID:11092761 PMID:26297558 NCBI chrNW_004936636:3,779,259...3,800,846 JBrowse link
G Otc ornithine transcarbamylase involved_in ISO (PMID:2556444), (PMID:8112735) RGD
BHF-UCL
PMID:2556444 PMID:8112735 PMID:9472964 RGD:4144071 NCBI chrNW_004936502:5,234,253...5,291,891 JBrowse link
citrulline metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ass1 argininosuccinate synthase 1 involved_in ISO (PMID:7977368) BHF-UCL PMID:7977368 NCBI chrNW_004936487:17,482,307...17,527,407 JBrowse link
G Ddah1 dimethylarginine dimethylaminohydrolase 1 involved_in ISO (PMID:19663506) UniProt PMID:19663506 NCBI chrNW_004936608:262,653...397,753 JBrowse link
G Ddah2 dimethylarginine dimethylaminohydrolase 2 involved_in ISO (PMID:10493931) UniProt PMID:10493931 NCBI chrNW_004936727:1,803,711...1,807,441 JBrowse link
G LOC101966195 huntingtin acts_upstream_of_or_within ISO (MGI:3712404|PMID:17213233) MGI PMID:17213233 MGI:3712404 NCBI chrNW_004936477:20,443,101...20,577,167 JBrowse link
CMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Upp1 uridine phosphorylase 1 involved_in ISO (MGI:2683856|PMID:14715930) MGI PMID:14715930 MGI:2683856 NCBI chrNW_004936478:22,508,602...22,531,604 JBrowse link
G Upp2 uridine phosphorylase 2 involved_in ISO (MGI:2683856|PMID:14715930) MGI PMID:14715930 MGI:2683856 NCBI chrNW_004936469:20,465,767...20,513,084 JBrowse link
CMP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak9 adenylate kinase 9 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chrNW_004936564:5,610,445...5,727,782 JBrowse link
cobalamin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cubn cubilin ISO RGD PMID:14576052 RGD:8554807 NCBI chrNW_004936520:10,140,784...10,410,082 JBrowse link
cobalamin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd4 ATP binding cassette subfamily D member 4 involved_in ISO (PMID:22922874) UniProt PMID:22922874 NCBI chrNW_004936488:3,526,875...3,538,851 JBrowse link
G Cblif cobalamin binding intrinsic factor ISO RGD PMID:14166172 RGD:1624368 NCBI chrNW_004936581:2,919,793...2,933,743 JBrowse link
G Mmachc metabolism of cobalamin associated C involved_in ISO (PMID:19700356), (PMID:22642810)
(PMID:23825108)
UniProt
BHF-UCL
PMID:19700356 PMID:22642810 PMID:23825108 NCBI chrNW_004936474:26,636,277...26,641,486 JBrowse link
G Mmadhc metabolism of cobalamin associated D involved_in ISO (PMID:24722857) UniProt PMID:24722857 NCBI chrNW_004936469:27,771,741...27,804,324 JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase involved_in ISO (PMID:23825108) BHF-UCL PMID:23825108 NCBI chrNW_004936484:16,087,924...16,180,089 JBrowse link
coenzyme A biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 involved_in ISO (PMID:17371050) BHF-UCL PMID:17371050 NCBI chrNW_004936551:594,647...626,016 JBrowse link
G Acot7 acyl-CoA thioesterase 7 involved_in ISO (PMID:10578051) BHF-UCL PMID:10578051 NCBI chrNW_004936623:1,112,021...1,191,190 JBrowse link
G Coasy Coenzyme A synthase involved_in
acts_upstream_of_or_within
ISO (PMID:11923312)
(MGI:2181228|PMID:11980892)
UniProt
MGI
PMID:11923312 PMID:11980892 MGI:2181228 NCBI chrNW_004936490:17,318,873...17,323,080 JBrowse link
G Pank1 pantothenate kinase 1 acts_upstream_of_or_within ISO (MGI:4461354|PMID:20559429), (MGI:5446555|PMID:22815849)
(MGI:3607004|PMID:16040613)
MGI PMID:16040613 PMID:20559429 PMID:22815849 MGI:3607004 MGI:4461354 MGI:5446555 NCBI chrNW_004936601:4,578,132...4,639,305 JBrowse link
G Pank2 pantothenate kinase 2 acts_upstream_of_or_within ISO (MGI:5446555|PMID:22815849) MGI PMID:22815849 MGI:5446555 NCBI chrNW_004936485:14,785,050...14,804,258 JBrowse link
G Pank3 pantothenate kinase 3 involved_in
acts_upstream_of_or_within
ISO (PMID:30927326)
(MGI:3607004|PMID:16040613)
(PMID:20797618)
UniProt
MGI
PMID:16040613 PMID:20797618 PMID:30927326 MGI:3607004 NCBI chrNW_004936622:810,016...836,103 JBrowse link
G Ppcs phosphopantothenoylcysteine synthetase involved_in ISO (PMID:11923312)
(PMID:29754768)
UniProt PMID:11923312 PMID:29754768 NCBI chrNW_004936474:23,867,117...23,870,832 JBrowse link
coenzyme A catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt7 nudix hydrolase 7 acts_upstream_of_or_within
involved_in
ISO (MGI:2137102|PMID:11415433)
(MGI:6450264|PMID:18799520)
MGI
UniProt
PMID:11415433 PMID:18799520 MGI:2137102 MGI:6450264 NCBI chrNW_004936475:26,079,298...26,095,466 JBrowse link
coenzyme A metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 involved_in ISO (PMID:17371050) BHF-UCL PMID:17371050 NCBI chrNW_004936551:594,647...626,016 JBrowse link
G Crot carnitine O-octanoyltransferase involved_in ISO (MGI:5546000|PMID:15492013) UniProt PMID:15492013 MGI:5546000 NCBI chrNW_004936763:1,425,394...1,462,638 JBrowse link
G Mccc2 methylcrotonyl-CoA carboxylase subunit 2 ISO RGD PMID:3995077 RGD:2316862 NCBI chrNW_004936549:4,760,073...4,830,190 JBrowse link
cortisol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1h calcium voltage-gated channel subunit alpha1 H involved_in ISO PMID:19342457
(PMID:19342457)
UniProt PMID:19342457 RGD:4891166 NCBI chrNW_004936694:2,702,224...2,724,574 JBrowse link
creatine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gamt guanidinoacetate N-methyltransferase acts_upstream_of_or_within
involved_in
ISO (MGI:3043413|PMID:15028668)
(PMID:8651275)
RGD
MGI
UniProt
PMID:8651275 PMID:15028668 PMID:15533043 MGI:3043413 RGD:1359081 NCBI chrNW_004936588:721,436...724,475 JBrowse link
creatine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gatm glycine amidinotransferase involved_in ISO (PMID:26490222) CAFA PMID:26490222 NCBI chrNW_004936471:8,017,611...8,032,703 JBrowse link
creatinine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mme membrane metalloendopeptidase involved_in ISO (PMID:22024547) UniProt PMID:22024547 NCBI chrNW_004936519:2,513,896...2,595,896 JBrowse link
CTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctps1 CTP synthase 1 involved_in ISO (PMID:24870241)
(PMID:16179339)
UniProt PMID:16179339 PMID:24870241 NCBI chrNW_004936474:22,611,037...22,633,208 JBrowse link
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 ISO RGD PMID:1316151 RGD:729254 NCBI chrNW_004936490:10,634,788...10,640,182 JBrowse link
CTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in ISO (PMID:11278936) UniProt PMID:11278936 NCBI chrNW_004936636:406,389...446,167 JBrowse link
CTP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 involved_in ISO (PMID:10858452) UniProt PMID:10858452 NCBI chrNW_004936555:6,896,661...6,920,333 JBrowse link
cyclic purine nucleotide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ampd2 adenosine monophosphate deaminase 2 involved_in ISO (PMID:23911318) UniProt PMID:23911318 NCBI chrNW_004936704:1,092,180...1,111,722 JBrowse link
cyclooxygenase pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdkrb1 bradykinin receptor B1 involved_in ISO (PMID:23846981) AgBase PMID:23846981 NCBI chrNW_004936604:551,774...567,014 JBrowse link
G LOC101974307 protein SCO1 homolog, mitochondrial acts_upstream_of_or_within ISO (MGI:6093414|PMID:28973536) MGI PMID:28973536 MGI:6093414 NCBI chrNW_004936595:3,523,789...3,537,933 JBrowse link
G Ptgs1 prostaglandin-endoperoxide synthase 1 involved_in ISO (PMID:1380156) BHF-UCL PMID:1380156 NCBI chrNW_004936487:10,745,465...10,758,812 JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 involved_in
acts_upstream_of_or_within
ISO (PMID:1380156), (PMID:7592599), (PMID:7947975)
(MGI:5315361|PMID:12925531)
(MGI:52337|PMID:1419907)
UniProt
MGI
PMID:1380156 PMID:1419907 PMID:7592599 PMID:7947975 PMID:12925531 MGI:52337 MGI:5315361 NCBI chrNW_004936481:3,821,564...3,828,086 JBrowse link
G Sphk1 sphingosine kinase 1 ISO RGD PMID:18723875 RGD:2311353 NCBI chrNW_004936594:1,482,830...1,489,337 JBrowse link
cysteine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta-synthase involved_in
acts_upstream_of_or_within
ISO (PMID:24416422)
(MGI:3044255|PMID:15030387)
BHF-UCL
MGI
PMID:15030387 PMID:24416422 MGI:3044255 NCBI chrNW_004936500:976,043...1,003,559 JBrowse link
G Cth cystathionine gamma-lyase involved_in ISO (PMID:10212249) RGD
UniProt
PMID:9359866 PMID:10212249 RGD:1359024 NCBI chrNW_004936591:1,619,446...1,643,667 JBrowse link
G Ggt1 gamma-glutamyltransferase 1 involved_in ISO (MGI:5294309|PMID:12468440) UniProt PMID:12468440 MGI:5294309 NCBI chrNW_004936619:762,278...791,610 JBrowse link
cysteine biosynthetic process via cystathionine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cth cystathionine gamma-lyase involved_in ISO (PMID:19428278) BHF-UCL PMID:19428278 NCBI chrNW_004936591:1,619,446...1,643,667 JBrowse link
cysteine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gclc glutamate-cysteine ligase catalytic subunit involved_in ISO (PMID:2294991) UniProt PMID:2294991 NCBI chrNW_004936476:7,371,270...7,418,756 JBrowse link
G LOC101977655 glutamate--cysteine ligase regulatory subunit acts_upstream_of_or_within ISO (MGI:2447526|PMID:12384496) MGI PMID:12384496 MGI:2447526 NCBI chrNW_004936537:5,356,914...5,378,998 JBrowse link
cysteinyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cars1 cysteinyl-tRNA synthetase 1 involved_in ISO (PMID:10908348), (PMID:11347887), (PMID:17303165) UniProt PMID:10908348 PMID:11347887 PMID:17303165 NCBI chrNW_004936794:1,115,111...1,165,286 JBrowse link
cytidine deamination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aicda activation induced cytidine deaminase involved_in ISO (MGI:2656023|PMID:12692563) UniProt PMID:12692563 MGI:2656023 NCBI chrNW_004936870:25,039...34,601 JBrowse link
G Cda cytidine deaminase involved_in ISO (PMID:9596658) RGD
UniProt
PMID:675715 PMID:9596658 RGD:2316616 NCBI chrNW_004936474:6,543,295...6,564,575 JBrowse link
G Cdadc1 cytidine and dCMP deaminase domain containing 1 involved_in ISO (PMID:26945630) UniProt PMID:26945630 NCBI chrNW_004936565:2,336,613...2,395,816 JBrowse link
cytosine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mapk1 mitogen-activated protein kinase 1 acts_upstream_of_or_within ISO (MGI:3510481|PMID:15284227) MGI PMID:15284227 MGI:3510481 NCBI chrNW_004936619:1,889,841...1,932,646 JBrowse link
G Tet2 tet methylcytosine dioxygenase 2 acts_upstream_of_or_within ISO (MGI:5298314|PMID:21803851) MGI PMID:21803851 MGI:5298314 NCBI chrNW_004936752:440,137...577,339 JBrowse link
D-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino acid oxidase involved_in ISO (PMID:16616139), (PMID:20603179)
(MGI:5442503|PMID:20603179)
UniProt PMID:16616139 PMID:20603179 MGI:5442503 NCBI chrNW_004936769:744,862...758,086 JBrowse link
D-amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddo D-aspartate oxidase involved_in ISO (PMID:20603179)
(MGI:5442503|PMID:20603179)
UniProt PMID:20603179 MGI:5442503 NCBI chrNW_004936564:6,280,890...6,299,838 JBrowse link
D-gluconate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pgd phosphogluconate dehydrogenase ISO RGD PMID:17447164 RGD:1624966 NCBI chrNW_004936623:4,234,869...4,251,690 JBrowse link
D-glucuronate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1a1 aldo-keto reductase family 1 member A1 involved_in
acts_upstream_of_or_within
ISO PMID:22820017
(MGI:3588122|PMID:15769935)
UniProt
MGI
PMID:15769935 PMID:22820017 MGI:3588122 RGD:13825440 NCBI chrNW_004936474:26,680,736...26,696,996 JBrowse link
D-ribose catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt5 nudix hydrolase 5 involved_in ISO (PMID:21389046) UniProt PMID:21389046 NCBI chrNW_004936484:3,148,955...3,169,527 JBrowse link
D-serine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Srr serine racemase involved_in
acts_upstream_of_or_within
ISO (PMID:11054547), (PMID:15193426)
(MGI:1347751|PMID:10557334), (MGI:1926659|PMID:11054547), (MGI:2183617|PMID:12021263), (MGI:3529732|PMID:15710237)
UniProt
MGI
PMID:10557334 PMID:11054547 PMID:12021263 PMID:15193426 PMID:15710237 MGI:1347751 MGI:1926659 MGI:2183617 MGI:3529732 NCBI chrNW_004936538:8,362,033...8,383,820 JBrowse link
D-serine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino acid oxidase involved_in ISO (PMID:18544534) UniProt PMID:18544534 NCBI chrNW_004936769:744,862...758,086 JBrowse link
D-serine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dao D-amino acid oxidase involved_in ISO (PMID:21679769) UniProt PMID:21679769 NCBI chrNW_004936769:744,862...758,086 JBrowse link
G Srr serine racemase involved_in ISO (PMID:20106978) UniProt PMID:20106978 RGD:8554326 NCBI chrNW_004936538:8,362,033...8,383,820 JBrowse link
D-xylose catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dhdh dihydrodiol dehydrogenase acts_upstream_of_or_within ISO (MGI:55366|PMID:6753830) MGI PMID:6753830 MGI:55366 NCBI chrNW_004936664:2,955,538...2,964,709 JBrowse link
dADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nudt18 nudix hydrolase 18 involved_in ISO (PMID:22556419) UniProt PMID:22556419 NCBI chrNW_004936555:5,929,262...5,932,334 JBrowse link
dADP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak9 adenylate kinase 9 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chrNW_004936564:5,610,445...5,727,782 JBrowse link
dAMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase involved_in ISO (MGI:3640719|PMID:10720488) MGI PMID:10720488 MGI:3640719 NCBI chrNW_004936530:2,217,713...2,224,070 JBrowse link
G Xdh xanthine dehydrogenase involved_in ISO (MGI:6478860|PMID:8064675) MGI PMID:8064675 MGI:6478860 NCBI chrNW_004936493:1,762,814...1,824,501 JBrowse link
dAMP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak9 adenylate kinase 9 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chrNW_004936564:5,610,445...5,727,782 JBrowse link
dATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adk adenosine kinase acts_upstream_of_or_within ISO (MGI:3620422|PMID:12163459) MGI PMID:12163459 MGI:3620422 NCBI chrNW_004936521:4,560,078...5,023,780 JBrowse link
dATP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within ISO (MGI:76875|PMID:7592575)
(MGI:2155238|PMID:9478961), (MGI:3619310|PMID:14607964)
(MGI:72798|PMID:7731963)
(MGI:74163|PMID:7670465)
MGI PMID:7592575 PMID:7670465 PMID:7731963 PMID:9478961 PMID:14607964 MGI:2155238 MGI:3619310 MGI:72798 MGI:74163 MGI:76875 NCBI chrNW_004936530:2,217,713...2,224,070 JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in ISO (PMID:24141705)
(MGI:5828027|PMID:27920203)
UniProt
MGI
PMID:24141705 PMID:27920203 MGI:5828027 NCBI chrNW_004936561:4,180,607...4,238,623 JBrowse link
dATP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak2 adenylate kinase 2 ISO RGD PMID:5010295 RGD:5490216 NCBI chrNW_004936474:15,887,014...15,908,522 JBrowse link
G Ak3 adenylate kinase 3 ISO RGD PMID:5010295 RGD:5490216 NCBI chrNW_004936503:497,391...517,011 JBrowse link
G Guk1 guanylate kinase 1 ISO RGD PMID:4307347 RGD:5147877 NCBI chrNW_004936864:76,707...86,479 JBrowse link
G Oga O-GlcNAcase ISO RGD PMID:17573462 RGD:2305953 NCBI chrNW_004936600:3,983,983...3,996,360 JBrowse link
daunorubicin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1a1 aldo-keto reductase family 1 member A1 involved_in ISO (PMID:18276838) UniProt PMID:18276838 NCBI chrNW_004936474:26,680,736...26,696,996 JBrowse link
G Akr1b1 aldo-keto reductase family 1 member B involved_in ISO (PMID:20837989) UniProt PMID:20837989 NCBI chrNW_004936579:1,312,175...1,328,397 JBrowse link
G Cbr4 carbonyl reductase 4 involved_in ISO (PMID:20837989) UniProt PMID:20837989 NCBI chrNW_004936516:1,184,859...1,205,668 JBrowse link
G LOC101974041 aflatoxin B1 aldehyde reductase member 2 involved_in ISO (PMID:20837989) UniProt PMID:20837989 NCBI chrNW_004936474:5,565,715...5,573,048 JBrowse link
dCDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmpk1 cytidine/uridine monophosphate kinase 1 ISO RGD PMID:192455 RGD:5133256 NCBI chrNW_004936474:28,147,459...28,180,779 JBrowse link
dCDP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak9 adenylate kinase 9 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chrNW_004936564:5,610,445...5,727,782 JBrowse link
dCMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5c 5', 3'-nucleotidase, cytosolic involved_in ISO (MGI:55510|PMID:6301357) MGI PMID:6301357 MGI:55510 NCBI chrNW_004936594:430,274...432,027 JBrowse link
G Upp1 uridine phosphorylase 1 involved_in ISO (MGI:73237|PMID:7744869) MGI PMID:7744869 MGI:73237 NCBI chrNW_004936478:22,508,602...22,531,604 JBrowse link
dCMP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak9 adenylate kinase 9 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chrNW_004936564:5,610,445...5,727,782 JBrowse link
dCTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dctpp1 dCTP pyrophosphatase 1 involved_in ISO (PMID:24467396) UniProt PMID:24467396 NCBI chrNW_004936501:12,880,745...12,884,240 JBrowse link
deoxyadenosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within ISO (MGI:76875|PMID:7592575)
(MGI:1095761|PMID:9272950), (MGI:72798|PMID:7731963)
(MGI:74163|PMID:7670465)
(MGI:2155238|PMID:9478961), (MGI:3619310|PMID:14607964), (MGI:3640719|PMID:10720488)
MGI PMID:7592575 PMID:7670465 PMID:7731963 PMID:9272950 PMID:9478961 PMID:10720488 PMID:14607964 MGI:1095761 MGI:2155238 MGI:3619310 MGI:3640719 MGI:72798 MGI:74163 MGI:76875 NCBI chrNW_004936530:2,217,713...2,224,070 JBrowse link
G Xdh xanthine dehydrogenase involved_in ISO (MGI:6478860|PMID:8064675) MGI PMID:8064675 MGI:6478860 NCBI chrNW_004936493:1,762,814...1,824,501 JBrowse link
deoxycytidine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dck deoxycytidine kinase ISO RGD PMID:7686601 PMID:8305745 RGD:2300395 RGD:2300398 NCBI chrNW_004936598:3,819,239...3,846,692 JBrowse link
G Tk2 thymidine kinase 2 ISO RGD PMID:21444706 RGD:5134349 NCBI chrNW_004936475:16,851,380...16,875,195 JBrowse link
deoxyguanosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gda guanine deaminase involved_in ISO (MGI:6478860|PMID:8064675) MGI PMID:8064675 MGI:6478860 NCBI chrNW_004936503:8,191,925...8,279,806 JBrowse link
G Xdh xanthine dehydrogenase involved_in ISO (MGI:6306257|PMID:30936145), (MGI:6478097|PMID:29895374), (MGI:6478533|PMID:8226898) MGI PMID:8226898 PMID:29895374 PMID:30936145 MGI:6306257 MGI:6478097 MGI:6478533 NCBI chrNW_004936493:1,762,814...1,824,501 JBrowse link
deoxyinosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Xdh xanthine dehydrogenase involved_in ISO (MGI:6306257|PMID:30936145)
(MGI:49329|PMID:1590774), (MGI:6478097|PMID:29895374), (MGI:6478533|PMID:8226898)
(MGI:2447927|PMID:12502743)
MGI PMID:1590774 PMID:8226898 PMID:12502743 PMID:29895374 PMID:30936145 MGI:2447927 MGI:49329 MGI:6306257 MGI:6478097 MGI:6478533 NCBI chrNW_004936493:1,762,814...1,824,501 JBrowse link
deoxyribonucleoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dera deoxyribose-phosphate aldolase involved_in ISO (PMID:9226884) UniProt PMID:9226884 NCBI chrNW_004936587:1,555,534...1,665,217 JBrowse link
deoxyribonucleoside monophosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnph1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 involved_in ISO (PMID:25108359)
PMID:17234634
UniProt PMID:17234634 PMID:25108359 RGD:8553712 NCBI chrNW_004936476:16,740,643...16,742,831 JBrowse link
deoxyribonucleoside triphosphate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rrm2b ribonucleotide reductase regulatory TP53 inducible subunit M2B acts_upstream_of_or_within ISO (MGI:2670318|PMID:12858174), (MGI:3714223|PMID:17486094) MGI PMID:12858174 PMID:17486094 MGI:2670318 MGI:3714223 NCBI chrNW_004936470:41,354,387...41,401,308 JBrowse link
deoxyribonucleotide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rrm1 ribonucleotide reductase catalytic subunit M1 involved_in ISO (MGI:3846285|PMID:19176520) UniProt PMID:19176520 MGI:3846285 NCBI chrNW_004936498:815,401...848,749 JBrowse link
G Rrm2 ribonucleotide reductase regulatory subunit M2 involved_in ISO (MGI:3846285|PMID:19176520) UniProt PMID:19176520 MGI:3846285 NCBI chrNW_004936532:6,348,041...6,390,144 JBrowse link
G Rrm2b ribonucleotide reductase regulatory TP53 inducible subunit M2B acts_upstream_of_or_within ISO (MGI:2152627|PMID:11517226) MGI PMID:11517226 MGI:2152627 NCBI chrNW_004936470:41,354,387...41,401,308 JBrowse link
deoxyribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nt5c 5', 3'-nucleotidase, cytosolic acts_upstream_of_or_within ISO (MGI:1353788|PMID:10681516) MGI PMID:10681516 MGI:1353788 NCBI chrNW_004936594:430,274...432,027 JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in ISO (PMID:23601106), (PMID:26294762) UniProt PMID:23601106 PMID:26294762 NCBI chrNW_004936561:4,180,607...4,238,623 JBrowse link
deoxyribonucleotide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rrm2 ribonucleotide reductase regulatory subunit M2 acts_upstream_of_or_within ISO (MGI:2655004|PMID:12655059) MGI PMID:12655059 MGI:2655004 NCBI chrNW_004936532:6,348,041...6,390,144 JBrowse link
G Tk2 thymidine kinase 2 acts_upstream_of_or_within ISO (MGI:3807446|PMID:18467430) MGI PMID:18467430 MGI:3807446 NCBI chrNW_004936475:16,851,380...16,875,195 JBrowse link
dGDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Guk1 guanylate kinase 1 involved_in ISO (PMID:31201273) RGD
UniProt
PMID:4307347 PMID:31201273 RGD:5147877 NCBI chrNW_004936864:76,707...86,479