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ONTOLOGY REPORT - ANNOTATIONS


Term:small molecule metabolic process
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Accession:GO:0044281 term browser browse the term
Definition:The chemical reactions and pathways involving small molecules, any low molecular weight, monomeric, non-encoded molecule.
Comment:Small molecules in GO include monosaccharides but exclude disaccharides and polysaccharides.
Synonyms:exact_synonym: small molecule metabolism


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'de novo' AMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADSL adenylosuccinate lyase involved_in IEA
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000041 NCBI chr 5:8,027,799...8,045,480
Ensembl chr 5:7,985,700...8,045,510
JBrowse link
G ADSS1 adenylosuccinate synthase 1 involved_in IEA
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000041
G ADSS2 adenylosuccinate synthase 2 involved_in IEA UniProt GO_REF:0000041 NCBI chr10:17,220,081...17,259,141
Ensembl chr10:17,220,208...17,259,166
JBrowse link
'de novo' CTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTPS1 CTP synthase 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr 6:170,201,749...170,233,105
Ensembl chr 6:170,201,748...170,233,054
JBrowse link
G CTPS2 CTP synthase 2 involved_in IEA UniProt GO_REF:0000041 NCBI chr  X:13,050,740...13,181,131
Ensembl chr  X:13,049,941...13,174,568
JBrowse link
'de novo' GDP-L-fucose biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GFUS GDP-L-fucose synthase involved_in IEA UniProt GO_REF:0000041 NCBI chr 4:950,947...955,865
Ensembl chr 4:950,177...959,682
JBrowse link
G GMDS GDP-mannose 4,6-dehydratase involved_in ISS
IEA
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000024 GO_REF:0000041 NCBI chr 7:849,088...1,285,563
Ensembl chr 7:752,239...1,285,550
JBrowse link
'de novo' IMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADSL adenylosuccinate lyase involved_in IEA UniProt GO_REF:0000041 NCBI chr 5:8,027,799...8,045,480
Ensembl chr 5:7,985,700...8,045,510
JBrowse link
G ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase involved_in IEA
ISO
IBA
(PMID:21873635) UniProt
RGD
GO_Central
PMID:9332377 PMID:21873635 GO_REF:0000041 RGD:70804 NCBI chr15:117,617,584...117,649,063
Ensembl chr15:117,617,502...117,649,107
JBrowse link
G GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase involved_in IEA UniProt GO_REF:0000041 NCBI chr13:197,130,898...197,158,797
Ensembl chr13:197,130,904...197,161,891
JBrowse link
G PAICS phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase involved_in IEA UniProt GO_REF:0000041 NCBI chr 8:55,700,700...55,722,982
Ensembl chr 8:55,700,686...55,722,983
JBrowse link
G PPAT phosphoribosyl pyrophosphate amidotransferase involved_in IEA UniProt GO_REF:0000041 NCBI chr 8:55,652,194...55,701,077
Ensembl chr 8:55,652,201...55,701,077
JBrowse link
'de novo' NAD biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NADSYN1 NAD synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:2,334,793...2,372,356
Ensembl chr 2:2,334,793...2,372,355
JBrowse link
'de novo' NAD biosynthetic process from tryptophan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFMID arylformamidase involved_in IEA UniProt GO_REF:0000104 NCBI chr12:3,759,688...3,785,829
Ensembl chr12:3,759,708...3,785,836
JBrowse link
G HAAO 3-hydroxyanthranilate 3,4-dioxygenase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:97,580,756...97,595,033
Ensembl chr 3:97,580,851...97,595,021
JBrowse link
G IDO1 indoleamine 2,3-dioxygenase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:9,245,283...9,260,140
Ensembl chr17:9,245,196...9,260,491
JBrowse link
G IDO2 indoleamine 2,3-dioxygenase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:9,277,039...9,344,405
Ensembl chr17:9,277,069...9,343,749
JBrowse link
G KMO kynurenine 3-monooxygenase involved_in IEA UniProt GO_REF:0000104 NCBI chr10:12,442,877...12,489,417
Ensembl chr10:12,431,982...12,490,409
JBrowse link
G KYNU kynureninase involved_in IEA UniProt GO_REF:0000104 NCBI chr15:8,847,335...8,982,951
Ensembl chr15:8,850,665...8,982,945
JBrowse link
'de novo' pyrimidine nucleobase biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:1476792 PMID:21873635 RGD:5132591 NCBI chr 3:111,887,017...111,914,511
Ensembl chr 3:111,887,020...111,914,495
JBrowse link
G CMPK1 cytidine/uridine monophosphate kinase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:164,161,439...164,197,429
Ensembl chr 6:164,162,515...164,197,379
JBrowse link
G CPS1 carbamoyl-phosphate synthase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr15:113,210,038...113,339,086
Ensembl chr15:113,209,999...113,339,078
JBrowse link
G DHODH dihydroorotate dehydrogenase (quinone) involved_in IBA
ISO
IEA
(PMID:21873635) GO_Central
RGD
InterPro
PMID:1476792 PMID:21873635 GO_REF:0000002 RGD:5132591 NCBI chr 6:14,942,898...14,956,000
Ensembl chr 6:14,942,933...14,956,000
JBrowse link
G MTOR mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:71,286,989...71,412,913
Ensembl chr 6:71,286,989...71,412,888
JBrowse link
G UMPS uridine monophosphate synthetase involved_in IEA InterPro GO_REF:0000002 NCBI chr13:135,611,857...135,650,656
Ensembl chr13:135,610,058...135,650,604
JBrowse link
'de novo' UMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in IEA UniProt GO_REF:0000041 NCBI chr 3:111,887,017...111,914,511
Ensembl chr 3:111,887,020...111,914,495
JBrowse link
G DHODH dihydroorotate dehydrogenase (quinone) involved_in IEA UniProt GO_REF:0000041 NCBI chr 6:14,942,898...14,956,000
Ensembl chr 6:14,942,933...14,956,000
JBrowse link
G UMPS uridine monophosphate synthetase involved_in IEA UniProt GO_REF:0000041 NCBI chr13:135,611,857...135,650,656
Ensembl chr13:135,610,058...135,650,604
JBrowse link
10-formyltetrahydrofolate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in ISO (PMID:1881876)
(MGI:5503248|PMID:23704330)
BHF-UCL PMID:1881876 PMID:23704330 MGI:5503248 NCBI chr 7:88,471,317...88,533,690
Ensembl chr 7:88,471,414...88,537,600
JBrowse link
G MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:15,140,929...15,330,265
Ensembl chr 1:15,140,898...15,329,966
JBrowse link
10-formyltetrahydrofolate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1L1 aldehyde dehydrogenase 1 family member L1 involved_in IEA UniProt GO_REF:0000104 NCBI chr 7:53,748,585...53,794,777
Ensembl chr 7:53,748,585...53,794,706
JBrowse link
10-formyltetrahydrofolate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTHFD2L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like ISO RGD PMID:21163947 RGD:7244288 NCBI chr 8:70,179,701...70,288,356
Ensembl chr 8:70,179,658...70,300,150
JBrowse link
2-oxobutyrate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G THNSL2 threonine synthase like 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:57,800,976...57,821,296
Ensembl chr 3:57,799,026...57,823,440
JBrowse link
2-oxobutyrate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PHYH phytanoyl-CoA 2-hydroxylase ISO RGD PMID:10588950 RGD:727286 NCBI chr10:48,404,298...48,423,978
Ensembl chr10:48,404,293...48,423,978
JBrowse link
2-oxoglutarate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AADAT aminoadipate aminotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:19,768,816...19,792,254
Ensembl chr14:19,768,499...19,791,938
JBrowse link
G DLD dihydrolipoamide dehydrogenase ISO RGD PMID:3571202 RGD:2306876 NCBI chr 9:107,642,129...107,668,443
Ensembl chr 9:107,642,095...107,673,583
JBrowse link
G DLST dihydrolipoamide S-succinyltransferase involved_in IDA
ISO
(PMID:10806400) UniProt
RGD
PMID:3571202 PMID:10806400 RGD:2306876 NCBI chr 7:98,091,161...98,111,267
Ensembl chr 7:98,091,123...98,111,572
JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr14:110,608,422...110,635,825
Ensembl chr14:110,608,430...110,635,874
JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 6:20,407,203...20,431,849
Ensembl chr 6:20,407,198...20,432,068
JBrowse link
G GPT2 glutamic--pyruvic transaminase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:37,625,428...37,669,695
Ensembl chr 6:37,625,105...37,669,669
JBrowse link
G IDH1 isocitrate dehydrogenase (NADP(+)) 1 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr15:111,341,153...111,362,330
Ensembl chr15:111,341,152...111,362,280
JBrowse link
G IDH2 isocitrate dehydrogenase (NADP(+)) 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 7:55,654,298...55,675,571
Ensembl chr 7:55,651,606...55,681,426
JBrowse link
G IDH3A isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha ISO RGD PMID:938457 RGD:2306828 NCBI chr 7:47,759,436...47,778,948
Ensembl chr 7:47,759,431...47,778,956
JBrowse link
G IDH3B isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta ISO RGD PMID:938457 RGD:2306828 NCBI chr17:32,955,061...32,960,110
Ensembl chr17:32,955,101...32,960,106
JBrowse link
G IDH3G isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma ISO RGD PMID:938457 RGD:2306828 NCBI chr  X:124,528,643...124,537,570
Ensembl chr  X:124,528,644...124,538,298
JBrowse link
G KYAT3 kynurenine aminotransferase 3 involved_in ISO (MGI:3835225|PMID:19029248) UniProt PMID:19029248 MGI:3835225 NCBI chr 4:127,451,475...127,507,766
Ensembl chr 4:127,451,516...127,507,760
JBrowse link
G MRPS36 mitochondrial ribosomal protein S36 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:47,386,412...47,405,342
Ensembl chr16:47,386,434...47,405,911
JBrowse link
G OGDH oxoglutarate dehydrogenase involved_in ISO
IEA
RGD
Ensembl
PMID:3571202 PMID:9712727 GO_REF:0000107 RGD:2306876 RGD:2306877 NCBI chr18:50,609,415...50,684,990
Ensembl chr18:50,609,418...50,684,964
JBrowse link
G OGDHL oxoglutarate dehydrogenase L involved_in ISO PMID:18783430 UniProt PMID:18783430 RGD:42721998 NCBI chr14:90,207,439...90,235,500
Ensembl chr14:90,207,608...90,236,369
JBrowse link
G PHYH phytanoyl-CoA 2-hydroxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:48,404,298...48,423,978
Ensembl chr10:48,404,293...48,423,978
JBrowse link
G TAT tyrosine aminotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:14,571,311...14,583,203
Ensembl chr 6:14,570,587...14,583,177
JBrowse link
3'-phosphoadenosine 5'-phosphosulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAPSS1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2448448|PMID:12414806) Ensembl
MGI
PMID:12414806 GO_REF:0000107 MGI:2448448 NCBI chr 8:114,252,059...114,369,309
Ensembl chr 8:114,251,528...114,373,427
JBrowse link
G PAPSS2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:99,718,299...99,816,346
Ensembl chr14:99,685,578...99,808,389
JBrowse link
3'-phosphoadenosine 5'-phosphosulfate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:31,724,290...31,796,594
Ensembl chr 1:31,722,721...31,796,595
JBrowse link
G LOC100623441 sulfotransferase 1C4 involved_in ISO (PMID:23207770) CAFA PMID:23207770 NCBI chr 3:47,765,022...47,777,178 JBrowse link
G LOC100623656 sulfotransferase 1C1 involved_in ISO (PMID:17425406) UniProt PMID:17425406 NCBI chr 3:47,838,671...47,864,646 JBrowse link
G LOC100624389 sulfotransferase 1C4-like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:47,787,762...47,803,281
Ensembl chr 3:47,787,966...47,807,385
JBrowse link
G LOC100624541 sulfotransferase family cytosolic 1B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:66,727,047...66,748,761
Ensembl chr 8:66,728,191...66,743,873
JBrowse link
G SULT1A3 sulfotransferase family 1A member 3 involved_in ISO (PMID:23207770) CAFA PMID:23207770 NCBI chr 3:18,351,205...18,354,653
Ensembl chr 3:18,351,621...18,354,651
JBrowse link
G SULT1E1 sulfotransferase family 1E, estrogen-preferring, member 1 involved_in ISO (PMID:23207770) CAFA PMID:23207770 NCBI chr 8:66,811,536...66,838,181 JBrowse link
G SULT2A1 sulfotransferase family 2A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:53,525,496...53,536,723
Ensembl chr 6:53,524,765...53,536,721
JBrowse link
G SULT2B1 sulfotransferase family 2B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:53,928,248...53,963,443
Ensembl chr 6:53,928,248...53,963,443
JBrowse link
3-keto-sphinganine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL2 BCL2 apoptosis regulator involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:158,337,403...158,518,214
Ensembl chr 1:158,288,544...158,518,879
JBrowse link
G KDSR 3-ketodihydrosphingosine reductase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:158,288,544...158,329,898
Ensembl chr 1:158,288,544...158,518,879
JBrowse link
4-hydroxyproline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HOGA1 4-hydroxy-2-oxoglutarate aldolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:108,958,812...108,986,373
Ensembl chr14:108,959,134...108,986,726
JBrowse link
9-cis-retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A1 aldehyde dehydrogenase 1 family member A1 acts_upstream_of_or_within ISO (MGI:2662611|PMID:11876656) MGI PMID:11876656 MGI:2662611 NCBI chr 1:226,163,347...226,217,342
Ensembl chr 1:226,161,296...226,217,312
JBrowse link
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2662611|PMID:11876656) Ensembl
MGI
PMID:11876656 GO_REF:0000107 MGI:2662611 NCBI chr 1:113,932,722...114,037,059
Ensembl chr 1:113,715,620...114,037,249
JBrowse link
G ALDH8A1 aldehyde dehydrogenase 8 family member A1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2662611|PMID:11876656) Ensembl
MGI
PMID:11876656 GO_REF:0000107 MGI:2662611 NCBI chr 1:29,060,682...29,083,815
Ensembl chr 1:29,060,710...29,083,166
JBrowse link
G CYP1A1 cytochrome P450 family 1 subfamily A member 1 ISO 9-cis- and all-trans-retinoic acid synthesized from 9-cis- and all-trans-retinal RGD PMID:8765131 RGD:2306683 NCBI chr 7:58,802,887...58,809,155
Ensembl chr 7:58,780,105...58,809,755
JBrowse link
G DHRS9 dehydrogenase/reductase 9 involved_in ISO (PMID:11304534) UniProt PMID:11304534 NCBI chr15:75,507,538...75,533,942
Ensembl chr15:75,507,588...75,535,655
JBrowse link
9-cis-retinoic acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A1 aldehyde dehydrogenase 1 family member A1 ISO RGD PMID:17167544 RGD:2306320 NCBI chr 1:226,163,347...226,217,342
Ensembl chr 1:226,161,296...226,217,312
JBrowse link
acetate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACSS1 acyl-CoA synthetase short chain family member 1 ISO RGD PMID:4334748 RGD:2317572 NCBI chr17:30,800,536...30,839,799
Ensembl chr17:30,800,426...30,839,742
JBrowse link
G ACSS2 acyl-CoA synthetase short chain family member 2 ISO RGD PMID:4334748 RGD:2317572 NCBI chr17:38,260,152...38,315,764
Ensembl chr17:38,260,147...38,315,758
JBrowse link
acetoacetic acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TYRP1 tyrosinase related protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:76308|PMID:7665913) Ensembl
MGI
PMID:7665913 GO_REF:0000107 MGI:76308 NCBI chr 1:209,725,698...209,745,141
Ensembl chr 1:209,725,636...209,745,705
JBrowse link
acetyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAT1 acetyl-CoA acetyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:36,525,266...36,545,634
Ensembl chr 9:36,525,261...36,545,633
JBrowse link
G ACLY ATP citrate lyase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:20,796,678...20,841,301
Ensembl chr12:20,796,749...20,841,298
JBrowse link
G ACSS1 acyl-CoA synthetase short chain family member 1 involved_in
acts_upstream_of_or_within
ISO (PMID:16788062)
(MGI:2151932|PMID:11150295)
UniProt
MGI
PMID:11150295 PMID:16788062 MGI:2151932 NCBI chr17:30,800,536...30,839,799
Ensembl chr17:30,800,426...30,839,742
JBrowse link
G ACSS2 acyl-CoA synthetase short chain family member 2 acts_upstream_of_or_within ISO (MGI:2151932|PMID:11150295) MGI PMID:11150295 MGI:2151932 NCBI chr17:38,260,152...38,315,764
Ensembl chr17:38,260,147...38,315,758
JBrowse link
G DIP2A disco interacting protein 2 homolog A involved_in ISO (MGI:6478983|PMID:30672040) UniProt PMID:30672040 MGI:6478983
G MLYCD malonyl-CoA decarboxylase involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:17316539 PMID:21873635 RGD:1600790 NCBI chr 6:4,683,386...4,698,698
Ensembl chr 6:4,681,664...4,698,661
JBrowse link
G PPCS phosphopantothenoylcysteine synthetase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:168,833,945...168,876,831
Ensembl chr 6:168,831,543...168,876,760
JBrowse link
acetyl-CoA biosynthetic process from acetate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACSS1 acyl-CoA synthetase short chain family member 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr17:30,800,536...30,839,799
Ensembl chr17:30,800,426...30,839,742
JBrowse link
acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLAT dihydrolipoamide S-acetyltransferase involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:7487891 PMID:21873635 RGD:1599112 NCBI chr 9:39,738,639...39,763,813
Ensembl chr 9:39,738,564...39,765,331
JBrowse link
G DLD dihydrolipoamide dehydrogenase ISO RGD PMID:7487891 RGD:1599112 NCBI chr 9:107,642,129...107,668,443
Ensembl chr 9:107,642,095...107,673,583
JBrowse link
G OLFML3 olfactomedin like 3 involved_in IEA GOC GO_REF:0000108 NCBI chr 4:106,566,978...106,571,086
Ensembl chr 4:106,563,450...106,627,166
JBrowse link
G PDHA1 pyruvate dehydrogenase E1 subunit alpha 1 involved_in IEA
ISO
ISS
IBA
(PMID:21873635) InterPro
RGD
UniProt
GO_Central
PMID:7487891 PMID:21873635 GO_REF:0000002 GO_REF:0000024 RGD:1599112 NCBI chr  X:15,699,924...15,718,908
Ensembl chr  X:15,700,050...15,718,904
JBrowse link
G PDHA2 pyruvate dehydrogenase E1 subunit alpha 2 ISO RGD PMID:7487891 RGD:1599112 NCBI chr 8:123,926,253...123,927,419 JBrowse link
G PDHB pyruvate dehydrogenase E1 subunit beta involved_in IBA
ISO
IEA
(PMID:21873635) GO_Central
RGD
InterPro
Ensembl
PMID:7487891 PMID:21873635 GO_REF:0000002 GO_REF:0000107 RGD:1599112 NCBI chr13:40,161,519...40,167,502
Ensembl chr13:40,160,546...40,167,476
JBrowse link
G PDHX pyruvate dehydrogenase complex component X involved_in IEA GOC GO_REF:0000108 NCBI chr 2:26,014,954...26,094,895
Ensembl chr 2:26,014,970...26,103,402
JBrowse link
acetyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAT1 acetyl-CoA acetyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:36,525,266...36,545,634
Ensembl chr 9:36,525,261...36,545,633
JBrowse link
G NUDT7 nudix hydrolase 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2137102|PMID:11415433) Ensembl
MGI
PMID:11415433 GO_REF:0000107 MGI:2137102 NCBI chr 6:10,161,959...10,174,006
Ensembl chr 6:10,158,688...10,173,980
JBrowse link
acetyl-CoA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAA2 acetyl-CoA acyltransferase 2 ISO RGD PMID:16476568 RGD:2317620 NCBI chr 1:99,284,467...99,310,759
Ensembl chr 1:99,280,800...99,332,381
JBrowse link
G ACACA acetyl-CoA carboxylase alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:38,580,916...38,875,067
Ensembl chr12:38,581,449...38,875,134
JBrowse link
G ACACB acetyl-CoA carboxylase beta involved_in ISO (PMID:20952656) UniProt PMID:20952656 NCBI chr14:41,621,574...41,739,916 JBrowse link
G ACLY ATP citrate lyase ISO RGD PMID:18062843 RGD:2317315 NCBI chr12:20,796,678...20,841,301
Ensembl chr12:20,796,749...20,841,298
JBrowse link
G ACOT12 acyl-CoA thioesterase 12 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2450440|PMID:12545200) Ensembl
MGI
PMID:12545200 GO_REF:0000107 MGI:2450440 NCBI chr 2:89,855,159...89,905,105
Ensembl chr 2:89,855,160...89,905,113
JBrowse link
G CS citrate synthase ISO RGD PMID:818082 PMID:938457 PMID:5820645 RGD:2306824 RGD:2306825 RGD:2306828 NCBI chr 5:21,669,778...21,700,737
Ensembl chr 5:21,666,510...21,700,736
JBrowse link
G FASN fatty acid synthase ISO RGD PMID:18062843 RGD:2317315 NCBI chr12:922,405...937,560
Ensembl chr12:920,507...937,559
JBrowse link
G HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr16:27,936,225...27,957,261
Ensembl chr16:27,936,217...27,957,194
JBrowse link
G HMGCS2 3-hydroxy-3-methylglutaryl-CoA synthase 2 involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 4:101,420,941...101,440,302
Ensembl chr 4:101,385,512...101,443,405
JBrowse link
G LOC110260333 hydroxymethylglutaryl-CoA synthase, mitochondrial-like involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr 4:101,385,486...101,404,273
Ensembl chr 4:101,385,512...101,443,405
JBrowse link
acyl-CoA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACADSB acyl-CoA dehydrogenase short/branched chain involved_in ISO PMID:8660691 MGI PMID:8660691 RGD:631739 NCBI chr14:132,563,002...132,607,574
Ensembl chr14:132,563,309...132,626,841
JBrowse link
G ACOT11 acyl-CoA thioesterase 11 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:157,749,917...157,832,280
Ensembl chr 6:157,749,921...157,807,086
JBrowse link
G ACOT12 acyl-CoA thioesterase 12 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:89,855,159...89,905,105
Ensembl chr 2:89,855,160...89,905,113
JBrowse link
G ACOT6 acyl-CoA thioesterase 6 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:96,984,547...96,990,400
Ensembl chr 7:96,984,716...96,992,873
JBrowse link
G ACOT7 acyl-CoA thioesterase 7 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:67,152,428...67,254,097
Ensembl chr 6:67,152,428...67,254,103
JBrowse link
G ACOT8 acyl-CoA thioesterase 8 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:2156286|PMID:11673457)
GO_Central
MGI
PMID:11673457 PMID:21873635 MGI:2156286 NCBI chr17:48,039,627...48,054,335
Ensembl chr17:48,039,628...48,054,335
JBrowse link
G ACOT9 acyl-CoA thioesterase 9 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:19,835,674...19,864,570
Ensembl chr  X:19,834,614...19,952,081
JBrowse link
G ACSM2B acyl-CoA synthetase medium chain family member 2B involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:25,357,943...25,387,843 JBrowse link
G ACSM3 acyl-CoA synthetase medium chain family member 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:25,247,723...25,284,063
Ensembl chr 3:25,247,722...25,283,709
JBrowse link
G ACSM4 acyl-CoA synthetase medium-chain family member 4 involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:12709059 PMID:21873635 RGD:1299602 NCBI chr 3:25,296,202...25,327,054
Ensembl chr 3:25,296,204...25,327,054
JBrowse link
G ACSM5 acyl-CoA synthetase medium chain family member 5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:25,393,121...25,422,551
Ensembl chr 3:25,393,174...25,422,476
JBrowse link
G BAAT bile acid-CoA:amino acid N-acyltransferase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:243,065,668...243,084,816
Ensembl chr 1:243,065,795...243,084,287
JBrowse link
G GCDH glutaryl-CoA dehydrogenase ISO RGD PMID:6895440 RGD:1598697 NCBI chr 2:66,131,154...66,138,963
Ensembl chr 2:66,130,625...66,138,868
JBrowse link
G GPAM glycerol-3-phosphate acyltransferase, mitochondrial involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3619815|PMID:15878874) Ensembl
MGI
PMID:15878874 GO_REF:0000107 MGI:3619815 NCBI chr14:122,538,600...122,582,390
Ensembl chr14:122,538,600...122,724,131
JBrowse link
G GPAT4 glycerol-3-phosphate acyltransferase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:10,705,998...10,724,486
Ensembl chr17:10,691,751...10,725,005
JBrowse link
G HMGCL 3-hydroxy-3-methylglutaryl-CoA lyase ISO RGD PMID:2573547 RGD:1599519 NCBI chr 6:81,611,516...81,630,454
Ensembl chr 6:81,611,422...81,630,530
JBrowse link
G HNF4A hepatocyte nuclear factor 4 alpha ISO RGD PMID:15870076 RGD:1625002 NCBI chr17:46,783,772...46,847,505
Ensembl chr17:46,783,777...46,847,503
JBrowse link
G LOC100158115 acyl-coenzyme A thioesterase 4 involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 7:96,941,065...96,945,834
Ensembl chr 7:96,868,157...96,949,358
JBrowse link
G LOC100515185 acyl-coenzyme A amino acid N-acyltransferase 2 involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 1:242,981,355...242,995,846 JBrowse link
G LOC110255172 acyl-coenzyme A amino acid N-acyltransferase 2-like involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 1:243,033,379...243,039,795 JBrowse link
G LOC110255331 acyl-coenzyme A thioesterase 1-like involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr 7:96,868,109...96,873,604
Ensembl chr 7:96,868,157...96,949,358
JBrowse link
G OXSM 3-oxoacyl-ACP synthase, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:12,685,893...12,692,148
Ensembl chr13:12,685,940...12,695,260
JBrowse link
adenine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:197,130,898...197,158,797
Ensembl chr13:197,130,904...197,161,891
JBrowse link
adenine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APRT adenine phosphoribosyltransferase acts_upstream_of_or_within ISO (MGI:80735|PMID:8643571), (MGI:83266|PMID:8894695)
(MGI:83266|PMID:8894695)
MGI PMID:8643571 PMID:8894695 MGI:80735 MGI:83266 NCBI chr 6:890,272...893,278
Ensembl chr 6:890,831...893,277
JBrowse link
G HPRT1 hypoxanthine phosphoribosyltransferase 1 acts_upstream_of_or_within ISO (MGI:83266|PMID:8894695) MGI PMID:8894695 MGI:83266 NCBI chr  X:110,321,144...110,357,902
Ensembl chr  X:110,321,208...110,357,899
JBrowse link
adenine salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APRT adenine phosphoribosyltransferase involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:85816|PMID:8864750)
GO_Central
MGI
PMID:8864750 PMID:21873635 MGI:85816 NCBI chr 6:890,272...893,278
Ensembl chr 6:890,831...893,277
JBrowse link
G HPRT1 hypoxanthine phosphoribosyltransferase 1 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
(PMID:21873635)
(MGI:1331314|PMID:10037486)
GO_Central
MGI
Ensembl
PMID:10037486 PMID:21873635 GO_REF:0000107 MGI:1331314 NCBI chr  X:110,321,144...110,357,902
Ensembl chr  X:110,321,208...110,357,899
JBrowse link
adenosine 5'-(hexahydrogen pentaphosphate) catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100515984 diphosphoinositol polyphosphate phosphohydrolase 3-beta involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:44,773,570...44,779,568 JBrowse link
G NUDT11 nudix hydrolase 11 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:44,912,160...44,918,977 JBrowse link
G NUDT3 nudix hydrolase 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:30,343,253...30,422,019
Ensembl chr 7:30,320,307...30,443,535
JBrowse link
G NUDT4 nudix hydrolase 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:89,714,012...89,728,260 JBrowse link
adenosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5E 5'-nucleotidase ecto involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3770326|PMID:16547283) Ensembl
MGI
PMID:16547283 GO_REF:0000107 MGI:3770326 NCBI chr 1:54,400,786...54,450,743
Ensembl chr 1:54,400,810...54,448,742
JBrowse link
adenosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(MGI:1095761|PMID:9272950), (MGI:72798|PMID:7731963)
(MGI:1095761|PMID:9272950), (MGI:3531253|PMID:8663040), (MGI:3808984|PMID:2015347), (MGI:49990|PMID:1618849), (MGI:59127|PMID:2387582), (MGI:76875|PMID:7592575), (MGI:83255|PMID:8894685)
(MGI:1861066|PMID:10899903), (MGI:2155238|PMID:9478961), (MGI:3525377|PMID:15630442), (MGI:3619310|PMID:14607964), (MGI:3640719|PMID:10720488), (MGI:3664521|PMID:16841096), (MGI:3794903|PMID:18340377)
(MGI:2151677|PMID:11591798), (MGI:3531253|PMID:8663040)
(MGI:74163|PMID:7670465)
(PMID:21873635)
Ensembl
MGI
GO_Central
PMID:1618849 PMID:2015347 PMID:2387582 PMID:7592575 PMID:7670465 PMID:7731963 PMID:8663040 PMID:8894685 PMID:9272950 PMID:9478961 PMID:10720488 PMID:10899903 PMID:11591798 PMID:14607964 PMID:15630442 PMID:16841096 PMID:18340377 PMID:21873635 GO_REF:0000107 MGI:1095761 MGI:1861066 MGI:2151677 MGI:2155238 MGI:3525377 MGI:3531253 MGI:3619310 MGI:3640719 MGI:3664521 MGI:3794903 MGI:3808984 MGI:49990 MGI:59127 MGI:72798 MGI:74163 MGI:76875 MGI:83255 NCBI chr17:47,044,492...47,072,232
Ensembl chr17:47,044,495...47,072,245
JBrowse link
G ADA2 adenosine deaminase 2 involved_in IBA
ISS
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000024 NCBI chr 5:69,526,413...69,554,640
Ensembl chr 5:69,526,434...69,554,661
JBrowse link
G ADAL adenosine deaminase like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:128,089,422...128,125,691
Ensembl chr 1:128,089,500...128,125,967
JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:107,987,060...108,052,043
Ensembl chr 3:107,986,528...108,080,151
JBrowse link
adenosine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACP3 acid phosphatase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:73,471,837...73,530,778
Ensembl chr13:73,471,881...73,571,052
JBrowse link
G ADA adenosine deaminase ISO RGD PMID:3746429 PMID:4462574 PMID:6815190 PMID:12675911 RGD:2291853 RGD:2291855 RGD:2291857 RGD:2291861 NCBI chr17:47,044,492...47,072,232
Ensembl chr17:47,044,495...47,072,245
JBrowse link
G ADK adenosine kinase ISO RGD PMID:12675911 RGD:2291861 NCBI chr14:76,836,072...77,320,586
Ensembl chr14:76,836,095...77,322,416
JBrowse link
G LOC100516797 cytosolic 5'-nucleotidase 1B involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:119,428,046...119,453,846 JBrowse link
G NT5C1A 5'-nucleotidase, cytosolic IA involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:12675911 PMID:21873635 RGD:2291861 NCBI chr 6:95,473,259...95,497,645
Ensembl chr 6:95,473,261...95,497,000
JBrowse link
G NT5C2 5'-nucleotidase, cytosolic II involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:12675911 PMID:21873635 RGD:2291861 NCBI chr14:114,062,451...114,167,460
Ensembl chr14:114,062,457...114,168,204
JBrowse link
G NT5C3A 5'-nucleotidase, cytosolic IIIA ISO RGD PMID:12675911 RGD:2291861 NCBI chr18:40,440,890...40,483,043
Ensembl chr18:40,441,102...40,483,376
JBrowse link
G NT5E 5'-nucleotidase ecto ISO RGD PMID:12675911 RGD:2291861 NCBI chr 1:54,400,786...54,450,743
Ensembl chr 1:54,400,810...54,448,742
JBrowse link
ADP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK1 adenylate kinase 1 involved_in IEA
ISO
UniProt
RGD
PMID:19049516 GO_REF:0000104 RGD:5134369 NCBI chr 1:268,355,032...268,365,659
Ensembl chr 1:268,355,032...268,365,598
JBrowse link
G AK2 adenylate kinase 2 involved_in IEA
ISO
UniProt
RGD
PMID:5123889 GO_REF:0000104 RGD:5490208 NCBI chr 6:89,295,164...89,318,169 JBrowse link
G AK3 adenylate kinase 3 involved_in IEA
ISO
UniProt
RGD
PMID:5010295 PMID:5123889 GO_REF:0000104 RGD:5490208 RGD:5490216 NCBI chr 1:217,236,561...217,263,144
Ensembl chr 1:217,236,482...217,261,370
JBrowse link
G AK4 adenylate kinase 4 involved_in IEA UniProt GO_REF:0000104 NCBI chr 6:147,177,029...147,257,799
Ensembl chr 6:147,177,029...147,257,814
JBrowse link
ADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMPD3 adenosine monophosphate deaminase 3 involved_in ISO (MGI:5917829|PMID:28746349) MGI PMID:28746349 MGI:5917829 NCBI chr 2:49,026,695...49,084,982
Ensembl chr 2:49,028,923...49,083,590
JBrowse link
G ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 involved_in ISO (MGI:3760051|PMID:17502665) MGI PMID:17502665 MGI:3760051 NCBI chr14:107,263,546...107,390,923
Ensembl chr14:107,263,449...107,506,052
JBrowse link
G NT5E 5'-nucleotidase ecto involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:54,400,786...54,450,743
Ensembl chr 1:54,400,810...54,448,742
JBrowse link
G NUDT9 nudix hydrolase 9 acts_upstream_of_or_within ISO (MGI:2158549|PMID:11825615) MGI PMID:11825615 MGI:2158549 NCBI chr 8:131,436,245...131,472,984 JBrowse link
ADP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMPD3 adenosine monophosphate deaminase 3 involved_in
acts_upstream_of_or_within
ISO (MGI:5529149|PMID:23078545)
(MGI:5476853|PMID:23439682)
CACAO
MGI
PMID:23078545 PMID:23439682 MGI:5476853 MGI:5529149 NCBI chr 2:49,026,695...49,084,982
Ensembl chr 2:49,028,923...49,083,590
JBrowse link
G BAD BCL2 associated agonist of cell death involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:7,831,192...7,842,864
Ensembl chr 2:7,830,920...7,842,863
JBrowse link
alanyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AARS1 alanyl-tRNA synthetase 1 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3640843|PMID:16906134)
GO_Central
MGI
RGD
PMID:2040280 PMID:16906134 PMID:21873635 MGI:3640843 RGD:2302982 NCBI chr 6:13,298,336...13,321,423
Ensembl chr 6:13,298,348...13,321,364
JBrowse link
G AARS2 alanyl-tRNA synthetase 2, mitochondrial involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 7:39,301,020...39,314,296
Ensembl chr 7:39,299,460...39,313,778
JBrowse link
G AARSD1 alanyl-tRNA synthetase domain containing 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr12:19,918,235...19,926,828 JBrowse link
alcohol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADH4 alcohol dehydrogenase 4 (class II), pi polypeptide involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1346361|PMID:10514444) Ensembl
MGI
PMID:10514444 GO_REF:0000107 MGI:1346361 NCBI chr 8:121,225,485...121,259,262
NCBI chr  X:98,582,002...98,583,002
Ensembl chr 8:121,225,656...121,261,747
JBrowse link
alcohol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADH4 alcohol dehydrogenase 4 (class II), pi polypeptide involved_in ISO (PMID:3466164) UniProt PMID:3466164 NCBI chr 8:121,225,485...121,259,262
NCBI chr  X:98,582,002...98,583,002
Ensembl chr 8:121,225,656...121,261,747
JBrowse link
G DHRS4 dehydrogenase/reductase (SDR family) member 4 involved_in ISO (PMID:18571493) UniProt PMID:18571493 NCBI chr 7:75,242,121...75,255,594
Ensembl chr 7:75,242,121...75,255,600
JBrowse link
aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA1H calcium voltage-gated channel subunit alpha1 H involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:40,637,420...40,694,616
Ensembl chr 3:40,637,436...40,694,818
JBrowse link
G CYP11B2 cytochrome P450 family 11 subfamily B member 2 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:50073|PMID:1686470), (MGI:80407|PMID:8645611)
GO_Central
MGI
PMID:1686470 PMID:8645611 PMID:21873635 MGI:50073 MGI:80407 NCBI chr 4:1,365,725...1,373,138 JBrowse link
aldosterone metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SCNN1B sodium channel epithelial 1 subunit beta involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:6478095|PMID:28567665) Ensembl
MGI
PMID:28567665 GO_REF:0000107 MGI:6478095 NCBI chr 3:22,832,259...22,902,592
Ensembl chr 3:22,832,262...22,902,063
JBrowse link
alpha-amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AADAT aminoadipate aminotransferase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:19,768,816...19,792,254
Ensembl chr14:19,768,499...19,791,938
JBrowse link
amino acid activation for nonribosomal peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASDH aminoadipate-semialdehyde dehydrogenase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5630050|PMID:24467666) Ensembl
MGI
PMID:24467666 GO_REF:0000107 MGI:5630050 NCBI chr 8:55,604,394...55,645,536
Ensembl chr 8:55,604,626...55,645,504
JBrowse link
ammonia assimilation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASL argininosuccinate lyase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3604426|PMID:12559843) Ensembl
MGI
PMID:12559843 GO_REF:0000107 MGI:3604426 NCBI chr 3:16,637,481...16,646,869
Ensembl chr 3:16,637,481...16,646,869
JBrowse link
G GLUL glutamate-ammonia ligase ISO RGD PMID:28323 RGD:2301547 NCBI chr 9:123,751,551...123,762,575
Ensembl chr 9:123,751,548...123,762,547
JBrowse link
AMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADSL adenylosuccinate lyase involved_in ISO (PMID:11428554) RGD
UniProt
PMID:3759987 PMID:11428554 RGD:5135303 NCBI chr 5:8,027,799...8,045,480
Ensembl chr 5:7,985,700...8,045,510
JBrowse link
G ADSS1 adenylosuccinate synthase 1 involved_in ISO (PMID:15786719) UniProt PMID:15786719
G ADSS2 adenylosuccinate synthase 2 involved_in
acts_upstream_of_or_within
ISO (PMID:2004783)
(MGI:64874|PMID:8308018)
UniProt
MGI
PMID:2004783 PMID:8308018 MGI:64874 NCBI chr10:17,220,081...17,259,141
Ensembl chr10:17,220,208...17,259,166
JBrowse link
G NUDT2 nudix hydrolase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:32,450,986...32,466,893
Ensembl chr10:32,451,064...32,466,839
JBrowse link
G PRPS1 phosphoribosyl pyrophosphate synthetase 1 ISO RGD PMID:2546925 RGD:5134985 NCBI chr  X:88,074,861...88,101,925
Ensembl chr  X:88,074,963...88,119,094
JBrowse link
G PRPS2 phosphoribosyl pyrophosphate synthetase 2 ISO RGD PMID:2546925 RGD:5134985 NCBI chr  X:9,505,034...9,531,044
Ensembl chr  X:9,502,748...9,600,301
JBrowse link
AMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:47,044,492...47,072,232
Ensembl chr17:47,044,495...47,072,245
JBrowse link
G AMPD3 adenosine monophosphate deaminase 3 involved_in ISO (MGI:5917829|PMID:28746349) MGI PMID:28746349 MGI:5917829 NCBI chr 2:49,026,695...49,084,982
Ensembl chr 2:49,028,923...49,083,590
JBrowse link
G NT5E 5'-nucleotidase ecto involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3770326|PMID:16547283)
GO_Central
MGI
RGD
PMID:16547283 PMID:21414400 PMID:21873635 MGI:3770326 RGD:5134346 NCBI chr 1:54,400,786...54,450,743
Ensembl chr 1:54,400,810...54,448,742
JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:107,987,060...108,052,043
Ensembl chr 3:107,986,528...108,080,151
JBrowse link
AMP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK1 adenylate kinase 1 involved_in IEA
ISO
UniProt
RGD
PMID:19049516 GO_REF:0000104 RGD:5134369 NCBI chr 1:268,355,032...268,365,659
Ensembl chr 1:268,355,032...268,365,598
JBrowse link
G AK2 adenylate kinase 2 involved_in IEA
ISO
UniProt
RGD
PMID:5010295 GO_REF:0000104 RGD:5490216 NCBI chr 6:89,295,164...89,318,169 JBrowse link
G AK3 adenylate kinase 3 involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000104 NCBI chr 1:217,236,561...217,263,144
Ensembl chr 1:217,236,482...217,261,370
JBrowse link
G AK4 adenylate kinase 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:147,177,029...147,257,799
Ensembl chr 6:147,177,029...147,257,814
JBrowse link
G AMPD1 adenosine monophosphate deaminase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:105,868,834...105,892,171
Ensembl chr 4:105,868,897...105,893,771
JBrowse link
G AMPD2 adenosine monophosphate deaminase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:110,493,490...110,505,123
Ensembl chr 4:110,493,495...110,505,138
JBrowse link
G AMPD3 adenosine monophosphate deaminase 3 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:5476853|PMID:23439682)
GO_Central
MGI
PMID:21873635 PMID:23439682 MGI:5476853 NCBI chr 2:49,026,695...49,084,982
Ensembl chr 2:49,028,923...49,083,590
JBrowse link
AMP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK3 adenylate kinase 3 ISO RGD PMID:5484813 RGD:2301093 NCBI chr 1:217,236,561...217,263,144
Ensembl chr 1:217,236,482...217,261,370
JBrowse link
G AK9 adenylate kinase 9 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:75,558,009...75,693,415 JBrowse link
AMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADK adenosine kinase involved_in IEA UniProt GO_REF:0000041 NCBI chr14:76,836,072...77,320,586
Ensembl chr14:76,836,095...77,322,416
JBrowse link
G APRT adenine phosphoribosyltransferase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:890,272...893,278
Ensembl chr 6:890,831...893,277
JBrowse link
anthranilate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HAAO 3-hydroxyanthranilate 3,4-dioxygenase involved_in IEA UniProt GO_REF:0000104 NCBI chr 3:97,580,756...97,595,033
Ensembl chr 3:97,580,851...97,595,021
JBrowse link
G KMO kynurenine 3-monooxygenase involved_in IEA UniProt GO_REF:0000104 NCBI chr10:12,442,877...12,489,417
Ensembl chr10:12,431,982...12,490,409
JBrowse link
G KYNU kynureninase involved_in IEA
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000104 NCBI chr15:8,847,335...8,982,951
Ensembl chr15:8,850,665...8,982,945
JBrowse link
arachidonic acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALOX12 arachidonate 12-lipoxygenase, 12S type involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:52,401,861...52,414,913
Ensembl chr12:52,286,019...52,414,907
JBrowse link
G ALOX12B arachidonate 12-lipoxygenase, 12R type involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:53,292,530...53,302,850
Ensembl chr12:53,292,524...53,302,993
JBrowse link
G ALOX15 arachidonate 15-lipoxygenase involved_in IEA
ISO
Ensembl
RGD
PMID:8117750 GO_REF:0000107 RGD:70288 NCBI chr12:52,287,174...52,295,873
Ensembl chr12:52,286,019...52,414,907
JBrowse link
G ALOX15B arachidonate 15-lipoxygenase type B involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:53,259,867...53,281,127
Ensembl chr12:53,259,940...53,281,520
JBrowse link
G ALOX5 arachidonate 5-lipoxygenase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:90,859,209...90,907,084
Ensembl chr14:90,858,975...90,907,094
JBrowse link
G ALOXE3 arachidonate lipoxygenase 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:53,309,845...53,331,780
Ensembl chr12:53,309,845...53,331,324
JBrowse link
G CYP1B1 cytochrome P450 family 1 subfamily B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:102,195,743...102,205,687
Ensembl chr 3:102,195,741...102,206,750
JBrowse link
G CYP2C42 cytochrome P450 C42 acts_upstream_of_or_within ISO (MGI:3665447|PMID:15102943) MGI PMID:15102943 MGI:3665447 NCBI chr14:106,666,445...106,701,809
Ensembl chr14:106,013,495...106,713,121
JBrowse link
G CYP2C49 cytochrome P450 2C49 involved_in ISO (MGI:1277710|PMID:9721182) UniProt PMID:9721182 MGI:1277710 NCBI chr14:106,571,803...106,612,082 JBrowse link
G CYP2D6 cytochrome P450 family 2 subfamily D member 6 involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:10945868 PMID:21873635 RGD:1599723 NCBI chr 5:6,539,021...6,543,643
Ensembl chr 5:6,538,907...6,543,643
JBrowse link
G CYP4A90 cytochrome P450 family 4 subfamily A member 90 ISO RGD PMID:12857783 RGD:1625451 NCBI chr 6:128,704,964...128,722,878 JBrowse link
G CYP4F52 cytochrome P450 family 4 subfamily F member 52 involved_in ISO (PMID:10660572) UniProt PMID:10660572 NCBI chr 2:61,745,069...61,759,971 JBrowse link
G DAGLA diacylglycerol lipase alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4437165|PMID:20147530) Ensembl
MGI
PMID:20147530 GO_REF:0000107 MGI:4437165 NCBI chr 2:9,802,011...9,863,808
Ensembl chr 2:9,802,012...9,863,865
JBrowse link
G DAGLB diacylglycerol lipase beta involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4437165|PMID:20147530) Ensembl
MGI
PMID:20147530 GO_REF:0000107 MGI:4437165 NCBI chr 3:4,741,882...4,779,210
Ensembl chr 3:4,741,877...4,779,205
JBrowse link
G EPHX1 epoxide hydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:13,757,489...13,773,071
Ensembl chr10:13,735,170...13,773,071
JBrowse link
G FADS1 fatty acid desaturase 1 ISO RGD PMID:11414679 RGD:632758 NCBI chr 2:9,735,425...9,747,405
Ensembl chr 2:9,735,293...9,749,671
JBrowse link
G GPX1 glutathione peroxidase 1 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr13:31,916,269...31,917,337
Ensembl chr13:31,914,932...31,917,335
JBrowse link
G GPX4 glutathione peroxidase 4 involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:77,321,568...77,323,931
Ensembl chr 2:77,320,464...77,323,886
JBrowse link
G LOC110261221 cytochrome P450 2J2-like ISO RGD PMID:9143331 RGD:632631 NCBI chr 6:152,321,816...152,358,179
Ensembl chr 6:152,321,848...152,648,979
JBrowse link
G MAPK3 mitogen-activated protein kinase 3 ISO RGD PMID:15027896 RGD:1626220 NCBI chr 3:18,291,444...18,299,410
Ensembl chr 3:18,291,445...18,299,567
JBrowse link
G MGLL monoglyceride lipase involved_in ISO (MGI:4836780|PMID:20729846) UniProt PMID:20729846 MGI:4836780 NCBI chr13:72,480,395...72,568,964
Ensembl chr13:72,479,337...72,568,962
JBrowse link
G PLA2G2F phospholipase A2 group IIF involved_in ISO (MGI:6467677|PMID:11877435) UniProt PMID:11877435 MGI:6467677 NCBI chr 6:78,413,459...78,423,311
Ensembl chr 6:78,413,284...78,423,309
JBrowse link
G PLA2G4A phospholipase A2 group IVA involved_in IEA
ISO
Ensembl
RGD
PMID:16603549 GO_REF:0000107 RGD:1642459 NCBI chr 9:127,853,581...128,164,825
Ensembl chr 9:127,859,051...128,162,636
JBrowse link
G PNPLA8 patatin like phospholipase domain containing 8 involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 9:108,271,343...108,320,574
Ensembl chr 9:108,255,083...108,320,264
JBrowse link
arginine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASS1 argininosuccinate synthase 1 involved_in IEA
ISO
IBA
(PMID:21873635) UniProt
RGD
GO_Central
PMID:12470967 PMID:21873635 GO_REF:0000041 RGD:631755 NCBI chr 1:270,531,434...270,586,364
Ensembl chr 1:270,531,589...270,586,361
JBrowse link
G NAGS N-acetylglutamate synthase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:19,170,398...19,173,968
Ensembl chr12:19,169,961...19,174,747
JBrowse link
arginine biosynthetic process via ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASL argininosuccinate lyase involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr 3:16,637,481...16,646,869
Ensembl chr 3:16,637,481...16,646,869
JBrowse link
G OTC ornithine transcarbamylase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:34,322,398...34,391,711
Ensembl chr  X:34,322,298...34,391,837
JBrowse link
arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDAH1 dimethylarginine dimethylaminohydrolase 1 involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr 4:130,485,305...130,617,534
Ensembl chr 4:130,483,878...130,617,531
JBrowse link
G DDAH2 dimethylarginine dimethylaminohydrolase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:23,838,993...23,842,514
Ensembl chr 7:23,838,993...23,842,516
JBrowse link
G FAH fumarylacetoacetate hydrolase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1929783|PMID:11209059) Ensembl
MGI
PMID:11209059 GO_REF:0000107 MGI:1929783 NCBI chr 7:49,047,833...49,087,790
Ensembl chr 7:49,047,983...49,105,598
JBrowse link
G NOS1 nitric oxide synthase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:35,112,898...35,299,297
Ensembl chr14:35,113,184...35,295,972
JBrowse link
G NOS2 nitric oxide synthase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:44,174,944...44,219,875
Ensembl chr12:44,174,944...44,327,111
JBrowse link
G NOS3 nitric oxide synthase 3 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr18:6,209,218...6,228,912
Ensembl chr18:6,209,156...6,228,938
JBrowse link
arginine catabolic process to glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OAT ornithine aminotransferase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:133,808,193...133,830,517 JBrowse link
arginine catabolic process to ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARG1 arginase 1 involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:15753084 PMID:21873635 RGD:8693655 NCBI chr 1:32,006,035...32,028,983
Ensembl chr 1:32,006,038...32,028,986
JBrowse link
G ARG2 arginase 2 involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:15753084 PMID:21873635 RGD:8693655 NCBI chr 7:91,343,987...91,385,911
Ensembl chr 7:91,343,987...91,385,911
JBrowse link
arginine catabolic process to proline via ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OAT ornithine aminotransferase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:133,808,193...133,830,517 JBrowse link
arginine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARG1 arginase 1 involved_in IEA
ISO
UniProt
RGD
PMID:4062872 GO_REF:0000043 RGD:2300098 NCBI chr 1:32,006,035...32,028,983
Ensembl chr 1:32,006,038...32,028,986
JBrowse link
G ARG2 arginase 2 ISO RGD PMID:16537391 RGD:1582129 NCBI chr 7:91,343,987...91,385,911
Ensembl chr 7:91,343,987...91,385,911
JBrowse link
G DDAH1 dimethylarginine dimethylaminohydrolase 1 involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:17322279 PMID:21873635 RGD:1625578 NCBI chr 4:130,485,305...130,617,534
Ensembl chr 4:130,483,878...130,617,531
JBrowse link
G DDAH2 dimethylarginine dimethylaminohydrolase 2 involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:17322279 PMID:21873635 RGD:1625578 NCBI chr 7:23,838,993...23,842,514
Ensembl chr 7:23,838,993...23,842,516
JBrowse link
G SLC39A8 solute carrier family 39 member 8 involved_in
acts_upstream_of
IEA
ISO
(MGI:5912781|PMID:28481222) Ensembl
UniProt
PMID:28481222 GO_REF:0000107 MGI:5912781 NCBI chr 8:118,604,852...118,678,115
Ensembl chr 8:118,605,293...118,684,039
JBrowse link
argininosuccinate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASL argininosuccinate lyase ISO RGD PMID:4062872 PMID:8586639 RGD:1599287 RGD:2300098 NCBI chr 3:16,637,481...16,646,869
Ensembl chr 3:16,637,481...16,646,869
JBrowse link
G ASS1 argininosuccinate synthase 1 involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:4062872 PMID:21873635 RGD:2300098 NCBI chr 1:270,531,434...270,586,364
Ensembl chr 1:270,531,589...270,586,361
JBrowse link
arginyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DALRD3 DALR anticodon binding domain containing 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr13:31,650,880...31,656,320
Ensembl chr13:31,650,875...31,656,326
JBrowse link
G RARS1 arginyl-tRNA synthetase 1 involved_in IBA
ISO
IEA
(PMID:21873635) GO_Central
RGD
InterPro
PMID:7082655 PMID:21873635 GO_REF:0000002 RGD:2303394 NCBI chr16:55,373,739...55,412,076
Ensembl chr16:55,373,726...55,412,117
JBrowse link
G RARS2 arginyl-tRNA synthetase 2, mitochondrial involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr 1:55,906,508...55,982,094
Ensembl chr 1:55,893,480...55,982,068
JBrowse link
aromatic amino acid family metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HPD 4-hydroxyphenylpyruvate dioxygenase involved_in IEA InterPro GO_REF:0000002 NCBI chr14:30,845,608...30,857,658
Ensembl chr14:30,845,613...30,857,667
JBrowse link
G IL4I1 interleukin 4 induced 1 acts_upstream_of_or_within ISO (MGI:3505621|PMID:15383589) MGI PMID:15383589 MGI:3505621 NCBI chr 6:54,906,401...54,945,840
Ensembl chr 6:54,906,401...54,946,202
JBrowse link
G PAH phenylalanine hydroxylase involved_in IEA InterPro GO_REF:0000002 NCBI chr 5:81,385,401...81,460,569
Ensembl chr 5:81,236,096...81,463,452
JBrowse link
G TPH1 tryptophan hydroxylase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:41,075,623...41,109,005
Ensembl chr 2:41,028,692...41,108,928
JBrowse link
G TPH2 tryptophan hydroxylase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 5:35,917,159...36,016,981
Ensembl chr 5:35,918,569...36,017,514
JBrowse link
arsonoacetate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AS3MT arsenite methyltransferase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:113,844,107...113,867,880
Ensembl chr14:113,847,859...113,869,507
JBrowse link
G N6AMT1 N-6 adenine-specific DNA methyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:192,248,511...192,265,923
Ensembl chr13:192,249,246...192,265,629
JBrowse link
asparagine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASNS asparagine synthetase (glutamine-hydrolyzing) involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:2887559 PMID:21873635 RGD:2316002 NCBI chr 9:77,318,341...77,336,290
Ensembl chr 9:77,318,213...77,509,020
JBrowse link
G ASNSD1 asparagine synthetase domain containing 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr15:94,261,910...94,272,129
Ensembl chr15:94,261,905...94,272,129
JBrowse link
asparagine catabolic process via L-aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASRGL1 asparaginase and isoaspartyl peptidase 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 2:9,328,260...9,353,384
Ensembl chr 2:9,328,269...9,353,340
JBrowse link
asparagine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASPG asparaginase involved_in ISO PMID:9575212 UniProt PMID:9575212 RGD:1299414
G DEDD death effector domain containing involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:89,311,308...89,323,692
Ensembl chr 4:89,311,310...89,323,724
JBrowse link
G NIT2 nitrilase family member 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:158,630,997...158,653,164
Ensembl chr13:158,630,743...158,653,095
JBrowse link
asparaginyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NARS1 asparaginyl-tRNA synthetase 1 involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr 1:106,911,267...106,933,105
Ensembl chr 1:106,911,277...106,933,118
JBrowse link
G NARS2 asparaginyl-tRNA synthetase 2, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:12,869,347...13,010,897
Ensembl chr 9:12,867,686...13,010,887
JBrowse link
aspartate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:53641|PMID:4193185)
GO_Central
MGI
PMID:4193185 PMID:21873635 MGI:53641 NCBI chr14:110,608,422...110,635,825
Ensembl chr14:110,608,430...110,635,874
JBrowse link
G GOT1L1 glutamic-oxaloacetic transaminase 1 like 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:48,500,156...48,506,992
Ensembl chr15:48,500,068...48,507,021
JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:53641|PMID:4193185) Ensembl
MGI
PMID:4193185 GO_REF:0000107 MGI:53641 NCBI chr 6:20,407,203...20,431,849
Ensembl chr 6:20,407,198...20,432,068
JBrowse link
aspartate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDO D-aspartate oxidase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:76,391,112...76,417,147
Ensembl chr 1:76,390,493...76,417,301
JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:110,608,422...110,635,825
Ensembl chr14:110,608,430...110,635,874
JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 6:20,407,203...20,431,849
Ensembl chr 6:20,407,198...20,432,068
JBrowse link
aspartate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADSS1 adenylosuccinate synthase 1 ISO RGD PMID:3759987 RGD:5135303
G ADSS2 adenylosuccinate synthase 2 ISO RGD PMID:71897 RGD:5135533 NCBI chr10:17,220,081...17,259,141
Ensembl chr10:17,220,208...17,259,166
JBrowse link
G ASS1 argininosuccinate synthase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:270,531,434...270,586,364
Ensembl chr 1:270,531,589...270,586,361
JBrowse link
G DDO D-aspartate oxidase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3617951|PMID:16525061) Ensembl
MGI
PMID:16525061 GO_REF:0000107 MGI:3617951 NCBI chr 1:76,391,112...76,417,147
Ensembl chr 1:76,390,493...76,417,301
JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in ISS
ISO
UniProt
RGD
PMID:2837211 GO_REF:0000024 RGD:2289377 NCBI chr14:110,608,422...110,635,825
Ensembl chr14:110,608,430...110,635,874
JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 involved_in ISS
ISO
UniProt
RGD
PMID:12686151 GO_REF:0000024 RGD:2289396 NCBI chr 6:20,407,203...20,431,849
Ensembl chr 6:20,407,198...20,432,068
JBrowse link
aspartyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DARS1 aspartyl-tRNA synthetase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr15:15,810,497...15,885,706
Ensembl chr15:15,810,628...15,885,706
JBrowse link
ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDOA aldolase, fructose-bisphosphate A involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:18,246,036...18,260,167
Ensembl chr 3:18,234,787...18,260,256
JBrowse link
G ATP5F1A ATP synthase F1 subunit alpha involved_in ISO (PMID:21106936) CAFA PMID:21106936 NCBI chr 1:95,738,789...95,750,835
Ensembl chr 1:95,625,800...95,750,875
JBrowse link
G ATP5F1B ATP synthase F1 subunit beta involved_in ISO (PMID:17510399), (PMID:21106936) CAFA PMID:17510399 PMID:21106936 NCBI chr 5:21,984,750...21,992,393
Ensembl chr 5:21,984,580...21,992,407
JBrowse link
G ATP5MC1 ATP synthase membrane subunit c locus 1 ISO RGD PMID:22209705 RGD:13800744 NCBI chr12:25,110,540...25,113,481
Ensembl chr12:25,110,535...25,113,485
JBrowse link
G ATP5MF ATP synthase membrane subunit f involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:6,389,338...6,396,960 JBrowse link
G ATP5PO ATP synthase peripheral stalk subunit OSCP ISO RGD PMID:7864899 RGD:14696824 NCBI chr13:197,509,331...197,519,530
Ensembl chr13:197,509,325...197,519,589
JBrowse link
G DGUOK deoxyguanosine kinase ISO RGD PMID:30404003 RGD:15039296 NCBI chr 3:69,054,749...69,091,366
Ensembl chr 3:69,054,760...69,091,341
JBrowse link
G LDHC lactate dehydrogenase C involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3775056|PMID:18367675) Ensembl
MGI
PMID:18367675 GO_REF:0000107 MGI:3775056 NCBI chr 2:40,748,567...40,810,114
Ensembl chr 2:40,748,863...40,809,910
JBrowse link
G NUDT2 nudix hydrolase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:32,450,986...32,466,893
Ensembl chr10:32,451,064...32,466,839
JBrowse link
G PKLR pyruvate kinase L/R ISO RGD PMID:4273555 PMID:5492954 RGD:2302789 RGD:2302790 NCBI chr 4:94,536,978...94,546,561
Ensembl chr 4:94,536,954...94,547,591
JBrowse link
G PKM pyruvate kinase, muscle ISO RGD PMID:4273555 RGD:2302790 NCBI chr 7:60,971,807...61,032,780 JBrowse link
G SLC25A13 solute carrier family 25 member 13 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:75,781,421...75,980,606
Ensembl chr 9:75,754,392...76,349,242
JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 6:49,332,169...49,348,642
Ensembl chr 6:49,332,169...49,349,048
JBrowse link
ATP generation from ADP term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK9 adenylate kinase 9 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:75,558,009...75,693,415 JBrowse link
ATP synthesis coupled proton transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP5F1A ATP synthase F1 subunit alpha involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 1:95,738,789...95,750,835
Ensembl chr 1:95,625,800...95,750,875
JBrowse link
G ATP5F1B ATP synthase F1 subunit beta involved_in IEA InterPro GO_REF:0000002 NCBI chr 5:21,984,750...21,992,393
Ensembl chr 5:21,984,580...21,992,407
JBrowse link
G ATP5F1C ATP synthase F1 subunit gamma involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:63,584,288...63,599,537
Ensembl chr10:63,583,693...63,599,453
JBrowse link
G ATP5F1D ATP synthase F1 subunit delta involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:77,216,430...77,219,301
Ensembl chr 2:77,216,433...77,222,749
JBrowse link
G ATP5F1E ATP synthase F1 subunit epsilon involved_in IEA InterPro GO_REF:0000002 NCBI chr17:59,163,085...59,174,488 JBrowse link
G ATP5MC1 ATP synthase membrane subunit c locus 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr12:25,110,540...25,113,481
Ensembl chr12:25,110,535...25,113,485
JBrowse link
G ATP5MC2 ATP synthase membrane subunit c locus 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:18,871,025...18,879,933
Ensembl chr 5:18,871,027...18,878,838
JBrowse link
G ATP5MC3 ATP synthase membrane subunit c locus 3 involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr15:81,091,037...81,094,297
Ensembl chr15:81,083,960...81,094,488
JBrowse link
G ATP5ME ATP synthase membrane subunit e involved_in IEA InterPro GO_REF:0000002 NCBI chr 8:112,092...113,526
Ensembl chr 8:110,604...114,908
JBrowse link
G ATP5MG ATP synthase membrane subunit g involved_in IEA
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000104 NCBI chr 9:45,706,449...45,716,541
Ensembl chr 9:45,661,106...45,720,783
JBrowse link
G ATP5PB ATP synthase peripheral stalk-membrane subunit b involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000104 NCBI chr 4:108,896,063...108,907,626
Ensembl chr 4:108,896,056...108,907,805
JBrowse link
G ATP5PD ATP synthase peripheral stalk subunit d involved_in IEA
IBA
(PMID:21873635) UniProt
InterPro
GO_Central
PMID:21873635 GO_REF:0000002 GO_REF:0000104 NCBI chr12:6,241,467...6,247,344 JBrowse link
G ATP5PF ATP synthase peripheral stalk subunit F6 involved_in IEA InterPro GO_REF:0000002 NCBI chr13:189,281,429...189,290,234
Ensembl chr13:189,278,945...189,290,229
JBrowse link
G ATP5PO ATP synthase peripheral stalk subunit OSCP involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr13:197,509,331...197,519,530
Ensembl chr13:197,509,325...197,519,589
JBrowse link
G ATP6 ATP synthase F0 subunit 6 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr MT:9,120...9,800
Ensembl chr MT:9,120...9,800
JBrowse link
G ATP6V1A ATPase H+ transporting V1 subunit A involved_in IEA GOC GO_REF:0000108 NCBI chr13:146,128,664...146,165,269
Ensembl chr13:146,121,759...146,192,442
JBrowse link
G MT-ATP8 mitochondrially encoded ATP synthase membrane subunit 8 involved_in IEA InterPro GO_REF:0000002 NCBI chr MT:8,959...9,162
Ensembl chr MT:8,959...9,162
JBrowse link
benzoyl-CoA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100517803 glycine N-phenylacetyltransferase involved_in ISO (PMID:22475485) UniProt PMID:22475485
benzylpenicillin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCC2 ATP binding cassette subfamily C member 2 ISO RGD PMID:19255943 RGD:11081014 NCBI chr14:110,955,698...111,038,898
Ensembl chr14:110,955,656...111,078,873
JBrowse link
beta-alanine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPYD dihydropyrimidine dehydrogenase involved_in IEA UniProt GO_REF:0000041 NCBI chr 4:119,931,471...120,712,461
Ensembl chr 4:119,931,458...120,712,462
JBrowse link
beta-alanine biosynthetic process via 3-ureidopropionate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UPB1 beta-ureidopropionase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:49,533,208...49,561,518
Ensembl chr14:49,533,226...49,565,100
JBrowse link
beta-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH6A1 aldehyde dehydrogenase 6 family member A1 ISO RGD PMID:2768248 RGD:1599052 NCBI chr 7:97,360,583...97,381,885
Ensembl chr 7:97,357,952...97,381,841
JBrowse link
beta-alanine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASDH aminoadipate-semialdehyde dehydrogenase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5630050|PMID:24467666) Ensembl
MGI
PMID:24467666 GO_REF:0000107 MGI:5630050 NCBI chr 8:55,604,394...55,645,536
Ensembl chr 8:55,604,626...55,645,504
JBrowse link
G DPYS dihydropyrimidinase ISO RGD PMID:8307005 RGD:1624990 NCBI chr 4:32,791,152...32,879,489
Ensembl chr 4:32,789,460...32,879,489
JBrowse link
G UPB1 beta-ureidopropionase 1 ISO RGD PMID:7626590 RGD:1624989 NCBI chr14:49,533,208...49,561,518
Ensembl chr14:49,533,226...49,565,100
JBrowse link
bile acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKR1D1 aldo-keto reductase family 1 member D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:11,416,065...11,532,846
Ensembl chr18:11,416,068...11,532,728
JBrowse link
G AMACR alpha-methylacyl-CoA racemase ISO RGD PMID:11964182 RGD:704372 NCBI chr16:20,005,741...20,023,339
Ensembl chr16:19,952,451...20,023,285
JBrowse link
G BAAT bile acid-CoA:amino acid N-acyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:243,065,668...243,084,816
Ensembl chr 1:243,065,795...243,084,287
JBrowse link
G CYP27A1 cytochrome P450 family 27 subfamily A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:120,809,886...120,852,196
Ensembl chr15:120,809,959...120,852,193
JBrowse link
G CYP39A1 cytochrome P450 family 39 subfamily A member 1 involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 7:41,345,011...41,425,854
Ensembl chr 7:41,344,804...41,426,343
JBrowse link
G CYP7A1 cytochrome P450 family 7 subfamily A member 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr 4:74,343,101...74,372,628
Ensembl chr 4:74,342,856...74,372,638
JBrowse link
G CYP7B1 cytochrome P450 family 7 subfamily B member 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 4:69,615,953...69,793,131
Ensembl chr 4:69,616,035...69,806,496
JBrowse link
G CYP8B1 cytochrome P450 family 8 subfamily B member 1 involved_in ISS
IDA
IEA
(PMID:14643796) UniProt PMID:14643796 GO_REF:0000024 GO_REF:0000041 NCBI chr13:26,330,233...26,331,738
Ensembl chr13:26,330,171...26,337,379
JBrowse link
G HNF1A HNF1 homeobox A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1933035|PMID:11279518) Ensembl
MGI
PMID:11279518 GO_REF:0000107 MGI:1933035 NCBI chr14:40,868,819...40,888,322
Ensembl chr14:40,868,676...40,888,328
JBrowse link
G HSD17B10 hydroxysteroid 17-beta dehydrogenase 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:46,218,540...46,220,942
Ensembl chr  X:46,218,545...46,220,944
JBrowse link
G PEX2 peroxisomal biogenesis factor 2 acts_upstream_of_or_within ISO (MGI:3027293|PMID:14673138) MGI PMID:14673138 MGI:3027293 NCBI chr 4:59,252,330...59,270,117
Ensembl chr 4:59,252,337...59,270,117
JBrowse link
G SLC27A2 solute carrier family 27 member 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:121,530,449...121,578,994
Ensembl chr 1:121,526,295...121,579,121
JBrowse link
G SLC27A5 solute carrier family 27 member 5 involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
Ensembl
PMID:21873635 GO_REF:0000002 GO_REF:0000107 NCBI chr 6:63,068,880...63,075,246
Ensembl chr 6:63,065,829...63,075,204
JBrowse link
G STAR steroidogenic acute regulatory protein ISO RGD PMID:15382124 RGD:1600081 NCBI chr15:48,377,597...48,385,398
Ensembl chr15:48,347,864...48,385,464
JBrowse link
bile acid conjugation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAAT bile acid-CoA:amino acid N-acyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:243,065,668...243,084,816
Ensembl chr 1:243,065,795...243,084,287
JBrowse link
G LOC110255172 acyl-coenzyme A amino acid N-acyltransferase 2-like involved_in ISO PMID:624713
PMID:12951368
UniProt PMID:624713 PMID:12951368 RGD:14695068 RGD:2312798 NCBI chr 1:243,033,379...243,039,795 JBrowse link
bile acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCB11 ATP binding cassette subfamily B member 11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:75,402,296...75,487,092
Ensembl chr15:75,400,766...75,486,403
JBrowse link
G ACAA1 acetyl-CoA acyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:22,964,844...23,020,138
Ensembl chr13:22,964,875...23,020,143
JBrowse link
G AMACR alpha-methylacyl-CoA racemase involved_in ISO (PMID:10655068) RGD
UniProt
PMID:8020470 PMID:10655068 RGD:2315634 NCBI chr16:20,005,741...20,023,339
Ensembl chr16:19,952,451...20,023,285
JBrowse link
G ARV1 ARV1 homolog, fatty acid homeostasis modulator involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4849624|PMID:20663892) Ensembl
MGI
PMID:20663892 GO_REF:0000107 MGI:4849624 NCBI chr14:59,396,958...59,409,008
Ensembl chr14:59,396,961...59,408,958
JBrowse link
G ATP8B1 ATPase phospholipid transporting 8B1 acts_upstream_of_or_within ISO (MGI:3041693|PMID:14976163) MGI PMID:14976163 MGI:3041693 NCBI chr 1:162,936,209...163,063,040
Ensembl chr 1:162,933,131...163,063,032
JBrowse link
G CYP19A2 cytochrome P450 19A2 ISO chenodeoxycholic acid RGD PMID:20026603 RGD:4890374 NCBI chr 1:120,652,172...120,695,899
Ensembl chr 1:120,367,667...120,695,899
JBrowse link
G GBA2 glucosylceramidase beta 2 involved_in
NOT|involved_in
IEA
ISO
(MGI:3690511|PMID:17080196) Ensembl
UniProt
PMID:17080196 GO_REF:0000107 MGI:3690511 NCBI chr 1:236,456,238...236,467,887
Ensembl chr 1:236,455,240...236,468,210
JBrowse link
G LEP leptin involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2386518|PMID:12114517) Ensembl
MGI
PMID:12114517 GO_REF:0000107 MGI:2386518 NCBI chr18:20,106,867...20,124,071
Ensembl chr18:20,106,868...20,123,447
JBrowse link
G LOC110255172 acyl-coenzyme A amino acid N-acyltransferase 2-like acts_upstream_of_or_within ISO (MGI:893269|PMID:9215542) MGI PMID:9215542 MGI:893269 NCBI chr 1:243,033,379...243,039,795 JBrowse link
G NPC1 NPC intracellular cholesterol transporter 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 6:108,403,126...108,450,486
Ensembl chr 6:108,402,877...108,450,990
JBrowse link
G NR1H4 nuclear receptor subfamily 1 group H member 4 acts_upstream_of_or_within ISO (MGI:2678884|PMID:12917447) RGD
MGI
PMID:12754200 PMID:12917447 PMID:27993716 MGI:2678884 RGD:14701034 RGD:1625079 NCBI chr 5:83,607,222...83,732,668
Ensembl chr 5:83,604,288...83,684,604
JBrowse link
G NR5A2 nuclear receptor subfamily 5 group A member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3050203|PMID:15014077) Ensembl
MGI
PMID:15014077 GO_REF:0000107 MGI:3050203 NCBI chr10:22,727,865...22,866,905
Ensembl chr10:22,715,735...22,866,904
JBrowse link
G SCP2 sterol carrier protein 2 involved_in ISO PMID:9325339 UniProt PMID:9325339 RGD:21201257 NCBI chr 6:159,191,045...159,314,985 JBrowse link
G SLC27A5 solute carrier family 27 member 5 acts_upstream_of_or_within ISO (MGI:3722950|PMID:16618417) RGD
MGI
PMID:12454267 PMID:16618417 MGI:3722950 RGD:1302363 NCBI chr 6:63,068,880...63,075,246
Ensembl chr 6:63,065,829...63,075,204
JBrowse link
biotin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTD biotinidase involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:4888153|PMID:21051254)
GO_Central
MGI
PMID:21051254 PMID:21873635 MGI:4888153 NCBI chr13:2,840,425...2,902,619
Ensembl chr13:2,840,456...2,903,680
JBrowse link
branched-chain amino acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAT1 branched chain amino acid transaminase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:48,814,212...48,925,632
Ensembl chr 5:48,814,300...48,925,976
JBrowse link
G BCAT2 branched chain amino acid transaminase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:54,107,682...54,123,595
Ensembl chr 6:54,107,681...54,143,602
JBrowse link
branched-chain amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAT1 branched chain amino acid transaminase 1 acts_upstream_of_or_within ISO (MGI:3027291|PMID:14755340) MGI PMID:14755340 MGI:3027291 NCBI chr 5:48,814,212...48,925,632
Ensembl chr 5:48,814,300...48,925,976
JBrowse link
G BCAT2 branched chain amino acid transaminase 2 acts_upstream_of_or_within ISO (MGI:3027291|PMID:14755340) RGD
MGI
PMID:11733007 PMID:14755340 MGI:3027291 RGD:1582175 NCBI chr 6:54,107,682...54,123,595
Ensembl chr 6:54,107,681...54,143,602
JBrowse link
G BCKDHA branched chain keto acid dehydrogenase E1 subunit alpha involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr 6:49,381,995...49,398,745 JBrowse link
G BCKDHB branched chain keto acid dehydrogenase E1 subunit beta involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 1:85,755,819...86,017,661
Ensembl chr 1:85,715,203...86,017,600
JBrowse link
G BCKDK branched chain keto acid dehydrogenase kinase involved_in ISO PMID:1377677 HGNC-UCL PMID:1377677 RGD:68712 NCBI chr 3:17,375,628...17,380,925
Ensembl chr 3:17,375,352...17,402,204
JBrowse link
G ECHDC2 enoyl-CoA hydratase domain containing 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:159,326,146...159,347,178
Ensembl chr 6:159,326,150...159,349,471
JBrowse link
G HIBADH 3-hydroxyisobutyrate dehydrogenase involved_in IEA UniProt GO_REF:0000043 NCBI chr18:44,985,410...45,102,171
Ensembl chr18:44,985,425...45,208,347
JBrowse link
G HIBCH 3-hydroxyisobutyryl-CoA hydrolase involved_in IEA UniProt GO_REF:0000043 NCBI chr15:94,795,744...94,941,362
Ensembl chr15:94,785,453...94,941,381
JBrowse link
G IVD isovaleryl-CoA dehydrogenase involved_in ISO (PMID:7640268) UniProt PMID:7640268 NCBI chr 1:130,896,488...130,910,582
Ensembl chr 1:130,893,983...130,940,350
JBrowse link
G SLC25A44 solute carrier family 25 member 44 involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr 4:93,837,004...93,857,154
Ensembl chr 4:93,810,504...93,857,158
JBrowse link
G TMEM91 transmembrane protein 91 involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 6:49,366,073...49,372,419 JBrowse link
branched-chain amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAT1 branched chain amino acid transaminase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 5:48,814,212...48,925,632
Ensembl chr 5:48,814,300...48,925,976
JBrowse link
G BCAT2 branched chain amino acid transaminase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4442298|PMID:20237068) InterPro
MGI
PMID:20237068 GO_REF:0000002 MGI:4442298 NCBI chr 6:54,107,682...54,123,595
Ensembl chr 6:54,107,681...54,143,602
JBrowse link
brexanolone catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HSD17B6 hydroxysteroid 17-beta dehydrogenase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:22,089,496...22,114,319
Ensembl chr 5:22,092,578...22,155,917
JBrowse link
brexanolone metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HSD17B10 hydroxysteroid 17-beta dehydrogenase 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:46,218,540...46,220,942
Ensembl chr  X:46,218,545...46,220,944
JBrowse link
butyrate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACADS acyl-CoA dehydrogenase short chain involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:3968063 PMID:21873635 RGD:2317678 NCBI chr14:40,642,810...40,656,922
Ensembl chr14:40,624,213...40,659,928
JBrowse link
butyrate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100158115 acyl-coenzyme A thioesterase 4 NOT|involved_in ISO (PMID:16940157) HGNC-UCL PMID:16940157 NCBI chr 7:96,941,065...96,945,834
Ensembl chr 7:96,868,157...96,949,358
JBrowse link
butyryl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT7 nudix hydrolase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:10,161,959...10,174,006
Ensembl chr 6:10,158,688...10,173,980
JBrowse link
calcitriol biosynthetic process from calciol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP27A1 cytochrome P450 family 27 subfamily A member 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:120,809,886...120,852,196
Ensembl chr15:120,809,959...120,852,193
JBrowse link
G CYP27B1 cytochrome P450 family 27 subfamily B member 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:23,053,129...23,058,865
Ensembl chr 5:23,050,114...23,058,470
JBrowse link
G CYP2R1 cytochrome P450 family 2 subfamily R member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:44,375,432...44,394,122
Ensembl chr 2:44,375,520...44,396,367
JBrowse link
cAMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADCY1 adenylate cyclase 1 involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:14985420 PMID:21873635 RGD:2312640 NCBI chr18:50,043,572...50,143,549
Ensembl chr18:50,046,575...50,143,771
JBrowse link
G ADCY10 adenylate cyclase 10 involved_in IEA
ISO
Ensembl
RGD
PMID:7225326 PMID:9874775 PMID:16627466 PMID:16964251 GO_REF:0000107 RGD:1299450 RGD:2313171 RGD:2313173 RGD:2313177 NCBI chr 4:83,103,768...83,205,015
Ensembl chr 4:83,098,285...83,204,453
JBrowse link
G ADCY2 adenylate cyclase 2 involved_in IEA
ISO
UniProt
RGD
PMID:11738086 PMID:12711600 GO_REF:0000043 RGD:2312641 RGD:2312674 NCBI chr16:74,305,729...74,729,999
Ensembl chr16:74,305,745...74,524,295
JBrowse link
G ADCY3 adenylate cyclase 3 involved_in IBA
ISO
IEA
(PMID:21873635) GO_Central
RGD
UniProt
PMID:12711600 PMID:21873635 GO_REF:0000043 RGD:2312674 NCBI chr 3:113,875,005...113,969,053
Ensembl chr 3:113,875,512...113,988,372
JBrowse link
G ADCY4 adenylate cyclase 4 involved_in IEA
ISO
UniProt
RGD
PMID:11738086 PMID:12711600 GO_REF:0000043 RGD:2312641 RGD:2312674 NCBI chr 7:74,955,410...74,972,440
Ensembl chr 7:74,952,038...74,974,201
JBrowse link
G ADCY5 adenylate cyclase 5 involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:10894801 PMID:11738086 PMID:12711600 PMID:21873635 RGD:2312641 RGD:2312674 RGD:2315006 NCBI chr13:136,965,746...137,133,795
Ensembl chr13:136,973,000...137,135,349
JBrowse link
G ADCY6 adenylate cyclase 6 involved_in IBA
ISO
IEA
(PMID:21873635) GO_Central
RGD
UniProt
PMID:10866989 PMID:10894801 PMID:11738086 PMID:12711600 PMID:15579502 PMID:15961389 PMID:18971210 PMID:21873635 GO_REF:0000043 RGD:1598749 RGD:2312641 RGD:2312654 RGD:2312674 RGD:2312678 RGD:2313211 RGD:2315006 NCBI chr 5:14,834,420...14,855,309
Ensembl chr 5:14,834,426...14,850,728
JBrowse link
G ADCY7 adenylate cyclase 7 involved_in IEA
ISO
Ensembl
RGD
UniProt
InterPro
PMID:12711600 GO_REF:0000002 GO_REF:0000043 GO_REF:0000107 RGD:2312674 NCBI chr 6:34,521,503...34,586,384
Ensembl chr 6:34,519,180...34,585,779
JBrowse link
G ADCY8 adenylate cyclase 8 involved_in IBA
ISO
IEA
(PMID:21873635) GO_Central
RGD
UniProt
PMID:16741924 PMID:19305019 PMID:19444869 PMID:21873635 GO_REF:0000043 RGD:2312769 RGD:2312785 RGD:7241269 NCBI chr 4:9,645,398...9,867,065
Ensembl chr 4:9,644,589...9,866,534
JBrowse link
G ADCY9 adenylate cyclase 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:76465|PMID:7575502), (MGI:80863|PMID:8662814) Ensembl
MGI
RGD
PMID:7575502 PMID:8662814 PMID:19444869 GO_REF:0000107 MGI:76465 MGI:80863 RGD:2312785 NCBI chr 3:38,117,211...38,303,600
Ensembl chr 3:38,103,923...38,303,538
JBrowse link
cAMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDE4A phosphodiesterase 4A involved_in IEA UniProt GO_REF:0000041 NCBI chr 2:69,225,403...69,268,327
Ensembl chr 2:69,225,395...69,267,971
JBrowse link
G PDE4B phosphodiesterase 4B involved_in IEA UniProt GO_REF:0000041 NCBI chr 6:146,167,262...146,720,105
Ensembl chr 6:146,166,681...146,720,127
JBrowse link
G PDE4C phosphodiesterase 4C involved_in IEA UniProt GO_REF:0000041 NCBI chr 2:59,567,644...59,598,398 JBrowse link
G PDE4D phosphodiesterase 4D involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000041 NCBI chr16:37,897,300...39,406,534
Ensembl chr16:37,897,300...39,154,586
JBrowse link
G PDE8A phosphodiesterase 8A involved_in IEA UniProt GO_REF:0000041 NCBI chr 7:52,410,766...52,558,482
Ensembl chr 7:52,410,779...52,556,884
JBrowse link
G PDE8B phosphodiesterase 8B involved_in IEA UniProt GO_REF:0000041 NCBI chr 2:86,007,190...86,323,796 JBrowse link
cAMP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNB4 calcium voltage-gated channel auxiliary subunit beta 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:76872|PMID:7595494) Ensembl
MGI
PMID:7595494 GO_REF:0000107 MGI:76872 NCBI chr15:402,801...455,691
Ensembl chr15:186,315...459,856
JBrowse link
G EPHA2 EPH receptor A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:75,251,465...75,279,364
Ensembl chr 6:75,251,467...75,279,314
JBrowse link
canonical glycolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENO1 enolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:69,385,879...69,401,664
Ensembl chr 6:69,385,882...69,401,117
JBrowse link
G ENO2 enolase 2 involved_in ISO PMID:15041191 CAFA PMID:15041191 RGD:2302788 NCBI chr 5:63,799,927...63,809,067
Ensembl chr 5:63,799,339...63,836,688
JBrowse link
G FOXK1 forkhead box K1 involved_in
acts_upstream_of
IEA
ISO
(PMID:30700909) Ensembl
UniProt
PMID:30700909 GO_REF:0000107 NCBI chr 3:3,556,139...3,621,150
Ensembl chr 3:3,556,007...3,621,142
JBrowse link
G FOXK2 forkhead box K2 involved_in
acts_upstream_of
IEA
ISO
(MGI:6281052|PMID:30700909) Ensembl
UniProt
PMID:30700909 GO_REF:0000107 MGI:6281052 NCBI chr12:560,848...615,646
Ensembl chr12:562,074...615,747
JBrowse link
G PFKL phosphofructokinase, liver type involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:207,167,287...207,191,688
Ensembl chr13:207,167,372...207,191,690
JBrowse link
G PFKM phosphofructokinase, muscle involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(MGI:4356361|PMID:19696889)
(PMID:21873635)
Ensembl
MGI
GO_Central
PMID:19696889 PMID:21873635 GO_REF:0000107 MGI:4356361 NCBI chr 5:78,475,473...78,525,052
Ensembl chr 5:78,475,540...78,526,995
JBrowse link
G PFKP phosphofructokinase, platelet involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:67,022,652...67,082,336
Ensembl chr10:67,022,652...67,082,451
JBrowse link
carboxylic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PON1 paraoxonase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:74,943,646...74,974,720
Ensembl chr 9:74,926,048...74,974,724
JBrowse link
G PON3 paraoxonase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:74,983,040...75,017,947
Ensembl chr 9:74,991,277...75,017,942
JBrowse link
carboxylic acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSAD cysteine sulfinic acid decarboxylase involved_in IEA InterPro GO_REF:0000002 NCBI chr 5:18,379,340...18,410,446
Ensembl chr 5:18,379,340...18,410,212
JBrowse link
G GAD1 glutamate decarboxylase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr15:76,991,863...77,034,819
Ensembl chr15:76,991,928...77,034,817
JBrowse link
G GAD2 glutamate decarboxylase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr10:49,316,682...49,391,013
Ensembl chr10:49,313,641...49,390,926
JBrowse link
G GADL1 glutamate decarboxylase like 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr13:16,892,162...17,049,314
Ensembl chr13:16,876,166...17,101,433
JBrowse link
G IL1RN interleukin 1 receptor antagonist ISO kainic acid RGD PMID:9685640 RGD:7174732
G LDHA lactate dehydrogenase A involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:40,814,163...40,827,284
Ensembl chr 2:40,812,453...40,826,715
JBrowse link
G LDHB lactate dehydrogenase B involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:12,988,754...12,990,033
Ensembl chr 2:12,988,708...12,990,067
JBrowse link
G LDHB lactate dehydrogenase B involved_in IEA InterPro GO_REF:0000002 NCBI chr 5:51,810,932...51,831,218 JBrowse link
G LDHC lactate dehydrogenase C involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:40,748,567...40,810,114
Ensembl chr 2:40,748,863...40,809,910
JBrowse link
G LOC110261667 glutamate decarboxylase 1-like involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:160,629,047...160,858,696 JBrowse link
G MCFD2 multiple coagulation factor deficiency 2, ER cargo receptor complex subunit involved_in ISO PMID:12832409 MGI PMID:12832409 RGD:724668 NCBI chr 3:93,620,921...93,633,018
Ensembl chr 3:93,591,533...93,633,016
JBrowse link
G MIF macrophage migration inhibitory factor involved_in ISO (PMID:12782713) BHF-UCL PMID:12782713 NCBI chr14:49,840,303...49,841,063
Ensembl chr14:49,840,305...49,862,317
JBrowse link
G PDXDC1 pyridoxal dependent decarboxylase domain containing 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:7,465,274...7,520,681
Ensembl chr 3:7,407,930...7,520,679
JBrowse link
G SGPL1 sphingosine-1-phosphate lyase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr14:73,696,902...73,781,830
Ensembl chr14:73,723,800...73,781,830
JBrowse link
G UEVLD UEV and lactate/malate dehyrogenase domains involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:40,617,086...40,671,701
Ensembl chr 2:40,617,039...40,671,684
JBrowse link
carnosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CARNS1 carnosine synthase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4457482|PMID:20097752), (MGI:5607487|PMID:24891507) InterPro
Ensembl
MGI
PMID:20097752 PMID:24891507 GO_REF:0000002 GO_REF:0000107 MGI:4457482 MGI:5607487 NCBI chr 2:5,097,238...5,105,697
Ensembl chr 2:5,097,238...5,112,282
JBrowse link
carnosine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CARNMT1 carnosine N-methyltransferase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:228,054,910...228,092,258
Ensembl chr 1:228,054,920...228,092,358
JBrowse link
CDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CMPK1 cytidine/uridine monophosphate kinase 1 involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:3010881 PMID:21873635 RGD:5133253 NCBI chr 6:164,161,439...164,197,429
Ensembl chr 6:164,162,515...164,197,379
JBrowse link
CDP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK9 adenylate kinase 9 involved_in ISO (PMID:23416111) UniProt PMID:23416111 NCBI chr 1:75,558,009...75,693,415 JBrowse link
cellular amino acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAT1 branched chain amino acid transaminase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:48,814,212...48,925,632
Ensembl chr 5:48,814,300...48,925,976
JBrowse link
G BCAT2 branched chain amino acid transaminase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:54,107,682...54,123,595
Ensembl chr 6:54,107,681...54,143,602
JBrowse link
G PYCR1 pyrroline-5-carboxylate reductase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr12:1,060,028...1,064,808
Ensembl chr12:1,060,568...1,064,809
JBrowse link
cellular amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENOSF1 enolase superfamily member 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:105,613,211...105,642,533
Ensembl chr 6:105,613,273...105,645,113
JBrowse link
G IL4I1 interleukin 4 induced 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:54,906,401...54,945,840
Ensembl chr 6:54,906,401...54,946,202
JBrowse link
cellular amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABHD14A abhydrolase domain containing 14A involved_in IEA InterPro GO_REF:0000002 NCBI chr13:34,104,359...34,111,953
Ensembl chr13:34,104,425...34,118,894
JBrowse link
G ACY1 aminoacylase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr13:34,114,119...34,119,684 JBrowse link
G ASL argininosuccinate lyase acts_upstream_of_or_within ISO (MGI:3604426|PMID:12559843) MGI PMID:12559843 MGI:3604426 NCBI chr 3:16,637,481...16,646,869
Ensembl chr 3:16,637,481...16,646,869
JBrowse link
G ASNS asparagine synthetase (glutamine-hydrolyzing) ISO RGD PMID:7818476 RGD:1298553 NCBI chr 9:77,318,341...77,336,290
Ensembl chr 9:77,318,213...77,509,020
JBrowse link
G DDC dopa decarboxylase involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:136,496,364...136,571,220
Ensembl chr 9:136,495,891...136,571,197
JBrowse link
G DIO1 iodothyronine deiodinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:158,376,744...158,392,745
Ensembl chr 6:158,374,173...158,392,754
JBrowse link
G GGT5 gamma-glutamyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:49,638,184...49,663,007
Ensembl chr14:49,640,422...49,666,575
JBrowse link
G GLUD1 glutamate dehydrogenase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr14:87,968,850...88,005,375
Ensembl chr14:87,968,850...88,005,550
JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 involved_in IEA
ISO
InterPro
RGD
PMID:14522984 GO_REF:0000002 RGD:1582383 NCBI chr 6:20,407,203...20,431,849
Ensembl chr 6:20,407,198...20,432,068
JBrowse link
G HDC histidine decarboxylase involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:121,505,677...121,525,416
Ensembl chr 1:121,505,742...121,525,255
JBrowse link
G HGD homogentisate 1,2-dioxygenase acts_upstream_of_or_within ISO (MGI:64581|PMID:8188247) MGI PMID:8188247 MGI:64581 NCBI chr13:139,660,315...139,710,402
Ensembl chr13:139,660,343...139,710,405
JBrowse link
G KYAT3 kynurenine aminotransferase 3 involved_in ISO (MGI:3835225|PMID:19029248) UniProt PMID:19029248 MGI:3835225 NCBI chr 4:127,451,475...127,507,766
Ensembl chr 4:127,451,516...127,507,760
JBrowse link
G LOC100519130 N-fatty-acyl-amino acid synthase/hydrolase PM20D1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:68,378,949...68,405,876 JBrowse link
G PM20D1 peptidase M20 domain containing 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:66,522,015...66,550,511 JBrowse link
G SDSL serine dehydratase like involved_in IEA InterPro GO_REF:0000002 NCBI chr14:38,471,162...38,484,459
Ensembl chr14:38,471,165...38,484,155
JBrowse link
G SGSM2 small G protein signaling modulator 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr12:48,416,774...48,462,851
Ensembl chr12:48,386,674...48,462,849
JBrowse link
G SLC16A2 solute carrier family 16 member 2 involved_in
acts_upstream_of
IEA
ISO
(PMID:26305885) Ensembl
ARUK-UCL
PMID:26305885 GO_REF:0000107 NCBI chr  X:59,748,685...59,861,018
Ensembl chr  X:59,748,741...59,861,018
JBrowse link
G SRR serine racemase involved_in IEA InterPro GO_REF:0000002 NCBI chr12:48,386,915...48,407,917
Ensembl chr12:48,386,674...48,462,849
JBrowse link
G TAT tyrosine aminotransferase ISO RGD PMID:12717026 RGD:1582407 NCBI chr 6:14,571,311...14,583,203
Ensembl chr 6:14,570,587...14,583,177
JBrowse link
cellular detoxification of methylglyoxal term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PARK7 Parkinsonism associated deglycase involved_in ISO (PMID:28993701) UniProt PMID:28993701 NCBI chr 6:68,629,327...68,645,147
Ensembl chr 6:68,629,214...68,645,520
JBrowse link
cellular glucuronidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100515741 UDP-glucuronosyltransferase 2B31 involved_in ISO (PMID:18719240), (PMID:20056724), (PMID:22579593) UniProt PMID:18719240 PMID:20056724 PMID:22579593 NCBI chr 8:66,251,785...66,297,861 JBrowse link
G LOC100623255 UDP-glucuronosyltransferase 2B31 involved_in ISO (PMID:17442341), (PMID:18719240), (PMID:20056724), (PMID:22579593) BHF-UCL PMID:17442341 PMID:18719240 PMID:20056724 PMID:22579593 NCBI chr 8:65,915,718...65,936,113 JBrowse link
G LOC100624788 UDP-glucuronosyltransferase 2A1 involved_in ISO (PMID:19858781) BHF-UCL PMID:19858781 NCBI chr 8:66,646,241...66,689,685 JBrowse link
G UGT1A6 UDP glucuronosyltransferase 1 family, polypeptide A6 involved_in ISO (PMID:17179145), (PMID:18719240), (PMID:22579593) UniProt PMID:17179145 PMID:18719240 PMID:22579593 NCBI chr15:133,968,693...134,049,029 JBrowse link
cellular ketone body metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OXCT1 3-oxoacid CoA-transferase 1 involved_in
acts_upstream_of_or_within
IBA
ISO
ISS
(PMID:21873635)
(MGI:2664113|PMID:12534938)
GO_Central
MGI
RGD
UniProt
PMID:3860190 PMID:12534938 PMID:21873635 GO_REF:0000024 MGI:2664113 RGD:2326212 NCBI chr16:26,514,497...26,659,739
Ensembl chr16:26,512,396...26,659,845
JBrowse link
cellular ketone metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP2B6B cytochrome P450 family 2 subfamily B member 6B involved_in ISO (PMID:19651758) BHF-UCL PMID:19651758 NCBI chr 6:49,158,175...49,173,872
Ensembl chr 6:49,110,812...49,178,413
JBrowse link
G DHRS4 dehydrogenase/reductase (SDR family) member 4 involved_in ISO (PMID:18571493) UniProt PMID:18571493 NCBI chr 7:75,242,121...75,255,594
Ensembl chr 7:75,242,121...75,255,600
JBrowse link
G NMT1 N-myristoyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:18,303,371...18,337,440
Ensembl chr12:18,303,371...18,337,446
JBrowse link
cGMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GUCY1A1 guanylate cyclase 1 soluble subunit alpha 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3640061|PMID:16614755) InterPro
MGI
Ensembl
PMID:16614755 GO_REF:0000002 GO_REF:0000107 MGI:3640061 NCBI chr 8:44,448,758...44,520,737
Ensembl chr 8:44,449,232...44,518,135
JBrowse link
G GUCY1A2 guanylate cyclase 1 soluble subunit alpha 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:62,101,581...62,510,803
Ensembl chr 9:62,101,613...62,499,581
JBrowse link
G GUCY1B1 guanylate cyclase 1 soluble subunit beta 1 involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr 8:44,544,364...44,604,690
Ensembl chr 8:44,544,179...44,604,704
JBrowse link
G GUCY2C guanylate cyclase 2C involved_in IEA
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000043 NCBI chr 5:57,780,484...57,902,475
Ensembl chr 5:57,822,563...58,022,071
JBrowse link
G GUCY2D guanylate cyclase 2D, retinal involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:53,200,570...53,250,566
Ensembl chr12:53,235,900...53,251,559
JBrowse link
G LOC100625149 guanylate cyclase soluble subunit beta-2 involved_in IEA InterPro GO_REF:0000002 NCBI chr11:16,772,313...16,811,787 JBrowse link
G NPPA natriuretic peptide A involved_in
acts_upstream_of
IBA
IEA
ISS
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:71,919,557...71,921,345
Ensembl chr 6:71,919,495...71,932,254
JBrowse link
G NPPB natriuretic peptide B acts_upstream_of
involved_in
ISS
IBA
(PMID:21873635) GO_Central PMID:21873635 GO_REF:0000024 NCBI chr 6:71,930,374...71,931,843
Ensembl chr 6:71,919,495...71,932,254
JBrowse link
G NPPC natriuretic peptide C acts_upstream_of
involved_in
ISS
IBA
(PMID:21873635) GO_Central
AgBase
PMID:21873635 GO_REF:0000024 NCBI chr15:132,504,669...132,509,688
Ensembl chr15:132,506,474...132,509,673
JBrowse link
G NPR1 natriuretic peptide receptor 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000043 NCBI chr 4:95,957,220...95,974,253
Ensembl chr 4:95,957,228...95,973,430
JBrowse link
G NPR2 natriuretic peptide receptor 2 involved_in
acts_upstream_of
IEA
ISO
IBA
(PMID:1672777)
(PMID:21873635)
Ensembl
GO_Central
GO_Central
PMID:1672777 PMID:21873635 GO_REF:0000107 NCBI chr 1:236,508,994...236,529,172
Ensembl chr 1:236,508,998...236,529,154
JBrowse link
G PLBD1 phospholipase B domain containing 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000043 NCBI chr 5:57,950,872...58,022,059
Ensembl chr 5:57,822,563...58,022,071
JBrowse link
cGMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDE1A phosphodiesterase 1A ISO RGD PMID:16514069 RGD:2312521 NCBI chr15:87,619,049...87,965,068
Ensembl chr15:87,440,916...87,964,202
JBrowse link
G PDE2A phosphodiesterase 2A involved_in ISS
IBA
IEA
(PMID:21873635) UniProt
GO_Central
Ensembl
PMID:21873635 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:7,136,637...7,227,966
Ensembl chr 9:7,136,644...7,227,964
JBrowse link
G PDE5A phosphodiesterase 5A acts_upstream_of_or_within ISO (MGI:2450821|PMID:12554648) MGI PMID:12554648 MGI:2450821 NCBI chr 8:104,270,858...104,420,955
Ensembl chr 8:104,270,881...104,420,947
JBrowse link
G PDE9A phosphodiesterase 9A involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr13:205,938,342...206,034,981
Ensembl chr13:205,938,334...206,034,981
JBrowse link
cGMP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (MGI:66348|PMID:7518067), (MGI:68066|PMID:3038581) MGI PMID:3038581 PMID:7518067 MGI:66348 MGI:68066 NCBI chr13:66,526,508...66,897,125
Ensembl chr13:66,528,322...66,897,128
JBrowse link
G PDE5A phosphodiesterase 5A acts_upstream_of_or_within ISO (MGI:4361111|PMID:19474061), (MGI:4834094|PMID:20511540) MGI PMID:19474061 PMID:20511540 MGI:4361111 MGI:4834094 NCBI chr 8:104,270,858...104,420,955
Ensembl chr 8:104,270,881...104,420,947
JBrowse link
G PDE9A phosphodiesterase 9A involved_in ISO (PMID:9624146) UniProt PMID:9624146 NCBI chr13:205,938,342...206,034,981
Ensembl chr13:205,938,334...206,034,981
JBrowse link
G RORA RAR related orphan receptor A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:66348|PMID:7518067) Ensembl
MGI
PMID:7518067 GO_REF:0000107 MGI:66348 NCBI chr 1:110,719,004...111,482,807
Ensembl chr 1:110,719,190...111,477,703
JBrowse link
cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA1 apolipoprotein A1 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
(PMID:21873635)
(MGI:2180727|PMID:8647961)
GO_Central
MGI
Ensembl
PMID:8647961 PMID:21873635 GO_REF:0000107 MGI:2180727 NCBI chr 9:44,216,481...44,218,360
Ensembl chr 9:44,216,393...44,218,978
JBrowse link
G APOA4 apolipoprotein A4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:44,201,587...44,204,072
Ensembl chr 9:44,201,508...44,204,206
JBrowse link
G CFTR CF transmembrane conductance regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3709533|PMID:17085523) Ensembl
MGI
PMID:17085523 GO_REF:0000107 MGI:3709533 NCBI chr18:28,627,717...28,818,209
Ensembl chr18:28,627,728...28,817,950
JBrowse link
G CYB5R3 cytochrome b5 reductase 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr 5:6,146,230...6,170,209
Ensembl chr 5:6,146,279...6,170,202
JBrowse link
G CYP51A1 cytochrome P450 family 51 subfamily A member 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:72,057,506...72,079,587
Ensembl chr 9:72,057,511...72,079,444
JBrowse link
G DHCR24 24-dehydrocholesterol reductase acts_upstream_of_or_within ISO (MGI:2686848|PMID:14684813), (MGI:3624168|PMID:16321981), (MGI:3769949|PMID:16513830) MGI PMID:14684813 PMID:16321981 PMID:16513830 MGI:2686848 MGI:3624168 MGI:3769949 NCBI chr 6:157,483,794...157,519,060
Ensembl chr 6:157,483,783...157,579,161
JBrowse link
G DHCR7 7-dehydrocholesterol reductase involved_in IEA
ISO
IBA
(PMID:21873635) UniProt
RGD
GO_Central
PMID:9831636 PMID:10329655 PMID:21873635 GO_REF:0000041 RGD:2316918 RGD:632010 NCBI chr 2:2,377,352...2,391,846
Ensembl chr 2:2,377,416...2,391,448
JBrowse link
G EBP EBP cholestenol delta-isomerase involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:11171067 PMID:21873635 RGD:628445 NCBI chr  X:42,670,592...42,678,571 JBrowse link
G FDFT1 farnesyl-diphosphate farnesyltransferase 1 involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:16440058 PMID:21873635 RGD:1626611 NCBI chr14:14,976,259...15,010,701
Ensembl chr14:14,967,273...15,104,179
JBrowse link
G G6PD glucose-6-phosphate dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:125,029,147...125,041,040
Ensembl chr  X:125,025,257...125,041,033
JBrowse link
G HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2180727|PMID:8647961), (MGI:3603484|PMID:15845870), (MGI:70238|PMID:7798939) UniProt
Ensembl
MGI
RGD
PMID:7798939 PMID:8647961 PMID:12841361 PMID:15845870 GO_REF:0000043 GO_REF:0000107 MGI:2180727 MGI:3603484 MGI:70238 RGD:1300058 NCBI chr 2:84,380,245...84,401,117
Ensembl chr 2:84,380,225...84,402,956
JBrowse link
G HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr16:27,936,225...27,957,261
Ensembl chr16:27,936,217...27,957,194
JBrowse link
G HMGCS2 3-hydroxy-3-methylglutaryl-CoA synthase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:101,420,941...101,440,302
Ensembl chr 4:101,385,512...101,443,405
JBrowse link
G HSD17B7 hydroxysteroid 17-beta dehydrogenase 7 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:2673751|PMID:12829805)
GO_Central
MGI
PMID:12829805 PMID:21873635 MGI:2673751 NCBI chr 4:87,720,747...87,743,037
Ensembl chr 4:87,720,118...87,742,992
JBrowse link
G INSIG1 insulin induced gene 1 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3689278|PMID:16955138)
GO_Central
MGI
PMID:16955138 PMID:21873635 MGI:3689278 NCBI chr18:2,885,494...2,898,758
Ensembl chr18:2,885,611...2,898,767
JBrowse link
G INSIG2 insulin induced gene 2 involved_in
acts_upstream_of_or_within
IBA
ISO
ISS
(PMID:21873635)
(MGI:3689278|PMID:16955138)
GO_Central
MGI
UniProt
PMID:16955138 PMID:21873635 GO_REF:0000024 MGI:3689278 NCBI chr15:23,676,684...23,699,591
Ensembl chr15:23,676,683...23,699,585
JBrowse link
G LBR lamin B receptor involved_in IEA UniProt GO_REF:0000041 NCBI chr10:13,389,896...13,416,831
Ensembl chr10:13,386,946...13,416,759
JBrowse link
G LOC100625049 isopentenyl-diphosphate Delta-isomerase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr10:68,534,520...68,539,279
Ensembl chr10:68,534,796...68,539,279
JBrowse link
G LOC110255234 liver carboxylesterase-like involved_in IEA Ensembl GO_REF:0000107
G LOC110260333 hydroxymethylglutaryl-CoA synthase, mitochondrial-like involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:101,385,486...101,404,273
Ensembl chr 4:101,385,512...101,443,405
JBrowse link
G LSS lanosterol synthase involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:1429550 PMID:16440058 PMID:21873635 RGD:1626611 RGD:2316919
G MSMO1 methylsterol monooxygenase 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr 8:43,726,834...43,745,784
Ensembl chr 8:43,726,855...43,744,714
JBrowse link
G MVD mevalonate diphosphate decarboxylase involved_in IEA UniProt GO_REF:0000041 NCBI chr 6:1,008,100...1,014,303
Ensembl chr 6:1,008,100...1,014,302
JBrowse link
G MVK mevalonate kinase involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
UniProt
PMID:21873635 GO_REF:0000043 GO_REF:0000107 NCBI chr14:41,320,790...41,357,437
Ensembl chr14:41,281,671...41,362,974
JBrowse link
G NPC1L1 NPC1 like intracellular cholesterol transporter 1 involved_in ISO (PMID:17140581) HGNC-UCL PMID:17140581 NCBI chr18:50,726,854...50,757,676
Ensembl chr18:50,726,894...50,757,649
JBrowse link
G PMVK phosphomevalonate kinase involved_in IBA
ISS
(PMID:21873635)
(PMID:8663599)
GO_Central
UniProt
PMID:8663599 PMID:21873635 NCBI chr 4:94,861,500...94,913,743
Ensembl chr 4:94,861,694...94,878,921
JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr16:25,745,902...25,783,524
Ensembl chr16:25,745,321...25,783,610
JBrowse link
G PRKAA2 protein kinase AMP-activated catalytic subunit alpha 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:155,683,392...155,754,283
Ensembl chr 6:155,681,781...155,754,272
JBrowse link
G TM7SF2 transmembrane 7 superfamily member 2 involved_in IEA UniProt GO_REF:0000041 NCBI chr 2:7,076,778...7,081,502
Ensembl chr 2:7,076,778...7,081,429
JBrowse link
cholesterol biosynthetic process via 24,25-dihydrolanosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP51A1 cytochrome P450 family 51 subfamily A member 1 ISO RGD PMID:7581240 RGD:2316902 NCBI chr 9:72,057,506...72,079,587
Ensembl chr 9:72,057,511...72,079,444
JBrowse link
cholesterol biosynthetic process via desmosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHCR24 24-dehydrocholesterol reductase involved_in ISO (PMID:11519011) UniProt PMID:11519011 NCBI chr 6:157,483,794...157,519,060
Ensembl chr 6:157,483,783...157,579,161
JBrowse link
cholesterol biosynthetic process via lathosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SC5D sterol-C5-desaturase involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:7961720 PMID:21873635 RGD:2316911 NCBI chr 9:48,357,115...48,372,391
Ensembl chr 9:48,357,145...48,372,388
JBrowse link
cholesterol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKR1D1 aldo-keto reductase family 1 member D1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:11,416,065...11,532,846
Ensembl chr18:11,416,068...11,532,728
JBrowse link
G APOE apolipoprotein E involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:1314982|PMID:9826706)
GO_Central
MGI
PMID:9826706 PMID:21873635 MGI:1314982 NCBI chr 6:51,373,113...51,375,333
Ensembl chr 6:51,372,259...51,377,794
JBrowse link
G CEL carboxyl ester lipase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:272,763,203...272,770,259
Ensembl chr 1:272,763,226...272,770,255
JBrowse link
G CYP27A1 cytochrome P450 family 27 subfamily A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:120,809,886...120,852,196
Ensembl chr15:120,809,959...120,852,193
JBrowse link
G CYP39A1 cytochrome P450 family 39 subfamily A member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1859119|PMID:10748047) Ensembl
MGI
PMID:10748047 GO_REF:0000107 MGI:1859119 NCBI chr 7:41,345,011...41,425,854
Ensembl chr 7:41,344,804...41,426,343
JBrowse link
G CYP46A1 cytochrome P450 family 46 subfamily A member 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:120,658,781...120,695,031
Ensembl chr 7:120,661,111...120,695,019
JBrowse link
G CYP7A1 cytochrome P450 family 7 subfamily A member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1933035|PMID:11279518), (MGI:3603484|PMID:15845870) Ensembl
MGI
InterPro
PMID:11279518 PMID:15845870 GO_REF:0000002 GO_REF:0000107 MGI:1933035 MGI:3603484 NCBI chr 4:74,343,101...74,372,628
Ensembl chr 4:74,342,856...74,372,638
JBrowse link
G MT3 metallothionein 3 involved_in ISS UniProt GO_REF:0000024 NCBI chr 6:18,634,735...18,636,134
Ensembl chr 6:18,634,721...18,789,137
JBrowse link
G SCARB1 scavenger receptor class B member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1934548|PMID:11278646)
(MGI:3690692|PMID:10559220)
Ensembl
MGI
PMID:10559220 PMID:11278646 GO_REF:0000107 MGI:1934548 MGI:3690692 NCBI chr14:28,301,421...28,393,568
Ensembl chr14:28,301,294...28,393,565
JBrowse link
G STX1B syntaxin 1B ISO RGD PMID:16081591 RGD:1599972 NCBI chr 3:17,439,563...17,459,517
Ensembl chr 3:17,439,581...17,459,516
JBrowse link
cholesterol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA1 ATP binding cassette subfamily A member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2153573|PMID:11559713) Ensembl
MGI
PMID:11559713 GO_REF:0000107 MGI:2153573 NCBI chr 1:246,144,277...246,278,492
Ensembl chr 1:246,144,277...246,278,492
JBrowse link
G ABCA5 ATP binding cassette subfamily A member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:11,018,692...11,152,916
Ensembl chr12:10,954,541...11,152,727
JBrowse link
G ABCG1 ATP binding cassette subfamily G member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:205,561,897...205,628,428
Ensembl chr13:205,561,951...205,628,425
JBrowse link
G ANGPTL3 angiopoietin like 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:149,836,417...149,845,854
Ensembl chr 6:149,832,541...149,845,831
JBrowse link
G APLP2 amyloid beta precursor like protein 2 acts_upstream_of_or_within ISO (MGI:3762423|PMID:17920016) MGI PMID:17920016 MGI:3762423 NCBI chr 9:56,798,781...56,871,849
Ensembl chr 9:56,798,827...56,872,643
JBrowse link
G APOA1 apolipoprotein A1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3588626|PMID:15995171)
(MGI:1099137|PMID:9327769), (MGI:1339278|PMID:10357841), (MGI:3487338|PMID:15466405), (MGI:3688492|PMID:9795222), (MGI:3696597|PMID:17071966), (MGI:70854|PMID:7751823)
UniProt
MGI
PMID:7751823 PMID:9327769 PMID:9795222 PMID:10357841 PMID:15466405 PMID:15995171