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ONTOLOGY REPORT - ANNOTATIONS


Term:small molecule metabolic process
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Accession:GO:0044281 term browser browse the term
Definition:The chemical reactions and pathways involving small molecules, any low molecular weight, monomeric, non-encoded molecule.
Comment:Small molecules in GO include monosaccharides but exclude disaccharides and polysaccharides.
Synonyms:exact_synonym: small molecule metabolism


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'de novo' AMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADSS1 adenylosuccinate synthase 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000041 NCBI chr 8:72,288,246...72,305,479
Ensembl chr 8:72,288,323...72,305,479
JBrowse link
G ADSS2 adenylosuccinate synthase 2 involved_in IEA
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000041 NCBI chr 7:35,440,250...35,477,470
Ensembl chr 7:35,440,676...35,476,795
JBrowse link
'de novo' CTP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTPS1 CTP synthase 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr15:2,067,767...2,093,014
Ensembl chr15:2,067,763...2,093,014
JBrowse link
G CTPS2 CTP synthase 2 involved_in IEA UniProt GO_REF:0000041 NCBI chr  X:12,759,998...12,867,707
Ensembl chr  X:12,760,015...12,865,111
JBrowse link
'de novo' GDP-L-fucose biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GFUS GDP-L-fucose synthase involved_in IEA UniProt GO_REF:0000041 NCBI chr13:37,267,119...37,272,101
Ensembl chr13:37,267,122...37,271,967
JBrowse link
G GMDS GDP-mannose 4,6-dehydratase involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000041 NCBI chr35:2,108,459...2,519,902
Ensembl chr35:2,151,528...2,519,513
JBrowse link
'de novo' IMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase involved_in IBA
ISO
IEA
(PMID:21873635) GO_Central
RGD
UniProt
PMID:9332377 PMID:21873635 GO_REF:0000041 RGD:70804 NCBI chr37:22,420,645...22,446,769
Ensembl chr37:22,420,603...22,446,697
JBrowse link
G LOC100856570 phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase involved_in IEA UniProt GO_REF:0000041 NCBI chr31:28,133,546...28,165,595 JBrowse link
G LOC487740 trifunctional purine biosynthetic protein adenosine-3 involved_in IEA UniProt GO_REF:0000041 NCBI chr31:29,032,399...29,063,706 JBrowse link
G PAICS phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase involved_in IEA UniProt GO_REF:0000041 NCBI chr13:48,296,232...48,682,650 JBrowse link
G PFAS phosphoribosylformylglycinamidine synthase involved_in IEA UniProt GO_REF:0000041 NCBI chr 5:33,055,144...33,076,823
Ensembl chr 5:33,060,929...33,076,287
JBrowse link
G PPAT phosphoribosyl pyrophosphate amidotransferase involved_in IEA UniProt GO_REF:0000041 NCBI chr13:48,618,460...48,656,164
Ensembl chr13:48,620,714...48,655,780
JBrowse link
'de novo' NAD biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NADSYN1 NAD synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:47,216,547...47,254,582
Ensembl chr18:47,216,577...47,254,514
JBrowse link
'de novo' NAD biosynthetic process from tryptophan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AFMID arylformamidase involved_in IEA UniProt GO_REF:0000104
G BIRC5 baculoviral IAP repeat containing 5 involved_in IEA UniProt GO_REF:0000104 NCBI chr 9:2,930,308...2,959,307 JBrowse link
G HAAO 3-hydroxyanthranilate 3,4-dioxygenase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:45,368,157...45,379,521
Ensembl chr10:45,368,178...45,379,160
JBrowse link
G IDO1 indoleamine 2,3-dioxygenase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:25,391,759...25,407,161
Ensembl chr16:25,391,754...25,407,048
JBrowse link
G IDO2 indoleamine 2,3-dioxygenase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:25,319,035...25,375,085
Ensembl chr16:25,319,035...25,385,515
JBrowse link
G KMO kynurenine 3-monooxygenase involved_in IEA UniProt GO_REF:0000104 NCBI chr 7:32,941,487...32,994,541
Ensembl chr 7:32,941,487...32,994,541
JBrowse link
G KYNU kynureninase involved_in IEA UniProt GO_REF:0000104 NCBI chr19:45,022,450...45,150,977
Ensembl chr19:45,022,072...45,149,339
JBrowse link
'de novo' pyrimidine nucleobase biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in IEA
ISO
IBA
(PMID:21873635) InterPro
RGD
Ensembl
GO_Central
PMID:1476792 PMID:21873635 GO_REF:0000002 GO_REF:0000107 RGD:5132591 NCBI chr17:21,198,839...21,221,897
Ensembl chr17:21,197,826...21,221,635
JBrowse link
G CMPK1 cytidine/uridine monophosphate kinase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr15:13,324,235...13,357,387
Ensembl chr15:13,326,185...13,358,152
JBrowse link
G CPS1 carbamoyl-phosphate synthase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr37:18,308,164...18,428,487
Ensembl chr37:18,143,986...18,427,697
JBrowse link
G DHODH dihydroorotate dehydrogenase (quinone) involved_in IBA
ISO
IEA
(PMID:21873635) GO_Central
RGD
InterPro
PMID:1476792 PMID:21873635 GO_REF:0000002 RGD:5132591 NCBI chr 5:77,756,411...77,766,207
Ensembl chr 5:77,756,407...77,774,090
JBrowse link
G MTOR mechanistic target of rapamycin kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:84,818,893...84,939,283
Ensembl chr 2:84,787,708...84,939,114
JBrowse link
G UMPS uridine monophosphate synthetase involved_in IEA InterPro GO_REF:0000002 NCBI chr33:27,754,592...27,782,517
Ensembl chr33:27,754,643...27,782,514
JBrowse link
'de novo' UMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase involved_in IEA UniProt GO_REF:0000041 NCBI chr17:21,198,839...21,221,897
Ensembl chr17:21,197,826...21,221,635
JBrowse link
G DHODH dihydroorotate dehydrogenase (quinone) involved_in IEA UniProt GO_REF:0000041 NCBI chr 5:77,756,411...77,766,207
Ensembl chr 5:77,756,407...77,774,090
JBrowse link
G UMPS uridine monophosphate synthetase involved_in IEA UniProt GO_REF:0000041 NCBI chr33:27,754,592...27,782,517
Ensembl chr33:27,754,643...27,782,514
JBrowse link
10-formyltetrahydrofolate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTHFD1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in ISO (PMID:1881876)
(MGI:5503248|PMID:23704330)
BHF-UCL PMID:1881876 PMID:23704330 MGI:5503248 NCBI chr 8:38,831,672...38,889,607
Ensembl chr 8:38,831,860...38,889,453
JBrowse link
G MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:41,316,247...41,495,226
Ensembl chr 1:41,309,419...41,495,216
JBrowse link
10-formyltetrahydrofolate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1L2 aldehyde dehydrogenase 1 family member L2 involved_in IEA UniProt GO_REF:0000104 NCBI chr10:33,310,523...33,365,677
Ensembl chr10:33,310,558...33,365,228
JBrowse link
10-formyltetrahydrofolate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTHFD2L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like ISO RGD PMID:21163947 RGD:7244288 NCBI chr13:62,670,543...62,803,270
Ensembl chr13:62,670,462...62,803,519
JBrowse link
2-oxobutyrate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G THNSL2 threonine synthase like 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:38,196,605...38,212,624
Ensembl chr17:38,191,494...38,212,809
JBrowse link
2-oxobutyrate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC478000 phytanoyl-CoA hydroxylase-like ISO RGD PMID:10588950 RGD:727286 NCBI chr 2:23,185,901...23,206,719
Ensembl chr 2:23,185,782...23,253,497
JBrowse link
2-oxoglutarate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AADAT aminoadipate aminotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:20,920,118...20,944,251
Ensembl chr25:20,920,139...20,945,387
JBrowse link
G DLD dihydrolipoamide dehydrogenase ISO RGD PMID:3571202 RGD:2306876 NCBI chr18:12,703,340...12,734,408
Ensembl chr18:12,703,341...12,734,479
JBrowse link
G DLST dihydrolipoamide S-succinyltransferase involved_in ISO (PMID:10806400) RGD
UniProt
PMID:3571202 PMID:10806400 RGD:2306876 NCBI chr 8:48,003,730...48,025,001
Ensembl chr 8:48,002,211...48,024,999
JBrowse link
G GPT2 glutamic--pyruvic transaminase 2 involved_in ISO (PMID:11863375) UniProt PMID:11863375 NCBI chr15:8,238,295...8,250,789 JBrowse link
G IDH1 isocitrate dehydrogenase (NADP(+)) 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:16,512,027...16,531,269
Ensembl chr37:16,512,770...16,531,219
JBrowse link
G IDH3A isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha ISO RGD PMID:938457 RGD:2306828 NCBI chr 3:58,301,982...58,318,925
Ensembl chr 3:58,302,001...58,318,248
JBrowse link
G IDH3B isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta ISO RGD PMID:938457 RGD:2306828 NCBI chr24:18,556,437...18,561,399 JBrowse link
G IDH3G isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma ISO RGD PMID:938457 RGD:2306828 NCBI chr  X:121,599,368...121,608,707
Ensembl chr  X:121,599,368...121,608,643
JBrowse link
G KYAT3 kynurenine aminotransferase 3 involved_in ISO (MGI:3835225|PMID:19029248) UniProt PMID:19029248 MGI:3835225 NCBI chr 6:59,409,715...59,473,238
Ensembl chr 6:59,416,191...59,473,232
JBrowse link
G LOC478000 phytanoyl-CoA hydroxylase-like involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:23,185,901...23,206,719
Ensembl chr 2:23,185,782...23,253,497
JBrowse link
G MRPS36 mitochondrial ribosomal protein S36 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:54,302,992...54,311,943
Ensembl chr 5:25,834,145...25,834,559
JBrowse link
G OGDH oxoglutarate dehydrogenase involved_in ISO
IEA
RGD
Ensembl
PMID:3571202 PMID:9712727 GO_REF:0000107 RGD:2306876 RGD:2306877
G OGDHL oxoglutarate dehydrogenase L involved_in ISO PMID:18783430 UniProt PMID:18783430 RGD:42721998 NCBI chr28:1,573,653...1,600,264
Ensembl chr28:1,573,793...1,596,285
JBrowse link
G TAT tyrosine aminotransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:77,365,589...77,378,474
Ensembl chr 5:77,366,138...77,378,419
JBrowse link
3'-phosphoadenosine 5'-phosphosulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PAPSS1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
(PMID:21873635)
(MGI:2448448|PMID:12414806)
GO_Central
MGI
Ensembl
PMID:12414806 PMID:21873635 GO_REF:0000107 MGI:2448448 NCBI chr32:28,136,741...28,235,529
Ensembl chr32:28,136,909...28,235,484
JBrowse link
G PAPSS2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr26:37,725,205...37,745,103
Ensembl chr26:37,725,616...37,743,928
JBrowse link
3'-phosphoadenosine 5'-phosphosulfate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:251,985...322,081
Ensembl chr 1:252,103...322,718
JBrowse link
G LOC482182 sulfotransferase 1E1 involved_in ISO (PMID:23207770) CAFA PMID:23207770 NCBI chr13:59,323,430...59,343,745 JBrowse link
G SULT1A1 sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1 involved_in ISO (PMID:12471039), (PMID:23207770) CAFA PMID:12471039 PMID:23207770 NCBI chr 6:18,176,156...18,179,492
Ensembl chr 6:18,176,355...18,179,489
JBrowse link
G SULT1B1 sulfotransferase family 1B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:59,229,514...59,244,387
Ensembl chr13:59,229,514...59,244,434
JBrowse link
G SULT1C3 sulfotransferase family 1C member 3 involved_in ISO (PMID:17425406) UniProt PMID:17425406 NCBI chr10:35,610,282...35,644,315
Ensembl chr10:35,610,989...35,644,557
JBrowse link
G SULT1C4 sulfotransferase family 1C member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:35,494,614...35,504,162
Ensembl chr10:35,495,727...35,504,125
JBrowse link
G SULT2B1 sulfotransferase family 2B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:107,705,568...107,721,160
Ensembl chr 1:107,705,576...107,720,876
JBrowse link
3-keto-sphinganine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KDSR 3-ketodihydrosphingosine reductase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:13,682,838...13,726,872
Ensembl chr 1:13,689,246...13,723,528
JBrowse link
4-hydroxyproline catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HOGA1 4-hydroxy-2-oxoglutarate aldolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:10,849,037...10,872,238
Ensembl chr28:10,849,046...10,871,853
JBrowse link
9-cis-retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A1 aldehyde dehydrogenase 1 family member A1 acts_upstream_of_or_within ISO (MGI:2662611|PMID:11876656) MGI PMID:11876656 MGI:2662611 NCBI chr 1:84,940,411...84,994,789
Ensembl chr 1:84,940,411...84,994,789
JBrowse link
G ALDH1A2 aldehyde dehydrogenase 1 family member A2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2662611|PMID:11876656) Ensembl
MGI
PMID:11876656 GO_REF:0000107 MGI:2662611 NCBI chr30:23,074,432...23,170,374
Ensembl chr30:23,074,432...23,340,030
JBrowse link
G ALDH8A1 aldehyde dehydrogenase 8 family member A1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2662611|PMID:11876656) Ensembl
MGI
PMID:11876656 GO_REF:0000107 MGI:2662611 NCBI chr 1:27,672,422...27,695,029
Ensembl chr 1:27,673,024...27,694,868
JBrowse link
G CYP1A1 cytochrome P450 family 1 subfamily A member 1 ISO 9-cis- and all-trans-retinoic acid synthesized from 9-cis- and all-trans-retinal RGD PMID:8765131 RGD:2306683 NCBI chr30:37,793,277...37,799,535
Ensembl chr30:37,793,508...37,796,866
JBrowse link
G DHRS9 dehydrogenase/reductase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr36:13,859,935...13,881,432
Ensembl chr36:13,866,959...13,880,179
JBrowse link
9-cis-retinoic acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1A1 aldehyde dehydrogenase 1 family member A1 ISO RGD PMID:17167544 RGD:2306320 NCBI chr 1:84,940,411...84,994,789
Ensembl chr 1:84,940,411...84,994,789
JBrowse link
acetate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACSS1 acyl-CoA synthetase short chain family member 1 ISO RGD PMID:4334748 RGD:2317572 NCBI chr23:1,192,771...1,251,724
Ensembl chr23:1,184,392...1,252,255
JBrowse link
G ACSS2 acyl-CoA synthetase short chain family member 2 ISO RGD PMID:4334748 RGD:2317572 NCBI chr24:23,928,800...23,973,383
Ensembl chr24:23,928,838...23,972,651
JBrowse link
acetoacetic acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TYRP1 tyrosinase related protein 1 acts_upstream_of_or_within ISO (MGI:76308|PMID:7665913) MGI PMID:7665913 MGI:76308 NCBI chr11:33,317,084...33,336,029
Ensembl chr11:33,317,121...33,335,498
JBrowse link
acetyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAT1 acetyl-CoA acetyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:24,361,301...24,379,807
Ensembl chr 5:24,361,301...24,379,812
JBrowse link
G ACLY ATP citrate lyase involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 9:20,929,530...20,974,200
Ensembl chr 9:20,929,614...20,973,663
JBrowse link
G ACSS1 acyl-CoA synthetase short chain family member 1 involved_in
acts_upstream_of_or_within
ISO (PMID:16788062)
(MGI:2151932|PMID:11150295)
UniProt
MGI
PMID:11150295 PMID:16788062 MGI:2151932 NCBI chr23:1,192,771...1,251,724
Ensembl chr23:1,184,392...1,252,255
JBrowse link
G ACSS2 acyl-CoA synthetase short chain family member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2151932|PMID:11150295) Ensembl
MGI
PMID:11150295 GO_REF:0000107 MGI:2151932 NCBI chr24:23,928,800...23,973,383
Ensembl chr24:23,928,838...23,972,651
JBrowse link
G DIP2A disco interacting protein 2 homolog A involved_in ISO (MGI:6478983|PMID:30672040) UniProt PMID:30672040 MGI:6478983 NCBI chr31:39,695,620...39,778,527
Ensembl chr31:39,686,465...39,777,484
JBrowse link
G MLYCD malonyl-CoA decarboxylase involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:17316539 PMID:21873635 RGD:1600790 NCBI chr 5:68,385,058...68,399,965
Ensembl chr 5:68,384,618...68,399,965
JBrowse link
G PPCS phosphopantothenoylcysteine synthetase involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:813,435...817,732
Ensembl chr15:813,870...816,825
JBrowse link
acetyl-CoA biosynthetic process from acetate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACSS1 acyl-CoA synthetase short chain family member 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr23:1,192,771...1,251,724
Ensembl chr23:1,184,392...1,252,255
JBrowse link
acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLAT dihydrolipoamide S-acetyltransferase involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:7487891 PMID:21873635 RGD:1599112 NCBI chr 5:21,062,833...21,094,235
Ensembl chr 5:21,064,026...21,094,153
JBrowse link
G DLD dihydrolipoamide dehydrogenase ISO RGD PMID:7487891 RGD:1599112 NCBI chr18:12,703,340...12,734,408
Ensembl chr18:12,703,341...12,734,479
JBrowse link
G PDHA1 pyruvate dehydrogenase E1 subunit alpha 1 involved_in IEA
ISO
ISS
InterPro
RGD
UniProt
PMID:7487891 GO_REF:0000002 GO_REF:0000024 RGD:1599112 NCBI chr  X:15,338,364...15,354,011
Ensembl chr  X:15,338,202...15,387,458
JBrowse link
G PDHB pyruvate dehydrogenase E1 subunit beta involved_in IBA
ISO
IEA
(PMID:21873635) GO_Central
RGD
InterPro
PMID:7487891 PMID:21873635 GO_REF:0000002 RGD:1599112 NCBI chr20:32,185,420...32,191,592 JBrowse link
G PDHX pyruvate dehydrogenase complex component X involved_in IEA GOC GO_REF:0000108 NCBI chr18:32,947,883...33,011,845
Ensembl chr18:32,917,858...33,011,819
JBrowse link
acetyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAT1 acetyl-CoA acetyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:24,361,301...24,379,807
Ensembl chr 5:24,361,301...24,379,812
JBrowse link
G NUDT7 nudix hydrolase 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2137102|PMID:11415433) Ensembl
MGI
PMID:11415433 GO_REF:0000107 MGI:2137102 NCBI chr 5:73,515,819...73,527,780
Ensembl chr 5:73,516,166...73,527,716
JBrowse link
acetyl-CoA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAA2 acetyl-CoA acyltransferase 2 ISO RGD PMID:16476568 RGD:2317620 NCBI chr 7:79,028,636...79,057,720 JBrowse link
G ACACA acetyl-CoA carboxylase alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:36,904,204...37,188,096
Ensembl chr 9:36,905,293...37,187,892
JBrowse link
G ACACB acetyl-CoA carboxylase beta involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:17,763,531...17,895,319
Ensembl chr26:17,747,362...17,894,400
JBrowse link
G ACLY ATP citrate lyase ISO RGD PMID:18062843 RGD:2317315 NCBI chr 9:20,929,530...20,974,200
Ensembl chr 9:20,929,614...20,973,663
JBrowse link
G ACOT12 acyl-CoA thioesterase 12 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2450440|PMID:12545200) Ensembl
MGI
PMID:12545200 GO_REF:0000107 MGI:2450440 NCBI chr 3:25,928,356...25,979,688
Ensembl chr 3:25,928,394...25,971,378
JBrowse link
G CS citrate synthase ISO RGD PMID:818082 PMID:938457 PMID:5820645 RGD:2306824 RGD:2306825 RGD:2306828 NCBI chr10:584,000...611,351
Ensembl chr10:584,904...611,436
JBrowse link
G FASN fatty acid synthase ISO RGD PMID:18062843 RGD:2317315 NCBI chr 9:233,105...249,573
Ensembl chr 9:232,963...249,092
JBrowse link
G HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:66,633,706...66,654,005
Ensembl chr 4:66,633,572...66,652,196
JBrowse link
G HMGCS2 3-hydroxy-3-methylglutaryl-CoA synthase 2 involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr17:56,679,942...56,698,521
Ensembl chr17:56,680,301...56,698,419
JBrowse link
acyl-CoA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACADSB acyl-CoA dehydrogenase short/branched chain involved_in ISO PMID:8660691 MGI PMID:8660691 RGD:631739 NCBI chr28:32,563,697...32,604,006
Ensembl chr28:32,563,671...32,601,063
JBrowse link
G ACOT11 acyl-CoA thioesterase 11 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:54,510,865...54,558,740
Ensembl chr 5:54,510,965...54,552,568
JBrowse link
G ACOT12 acyl-CoA thioesterase 12 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:25,928,356...25,979,688
Ensembl chr 3:25,928,394...25,971,378
JBrowse link
G ACOT4 acyl-CoA thioesterase 4 involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 8:46,889,326...46,894,379
Ensembl chr 8:46,852,880...46,911,640
JBrowse link
G ACOT6 acyl-CoA thioesterase 6 involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr 8:46,905,354...46,911,627
Ensembl chr 8:46,852,880...46,911,640
JBrowse link
G ACOT7 acyl-CoA thioesterase 7 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:60,153,616...60,239,254
Ensembl chr 5:60,153,616...60,239,239
JBrowse link
G ACOT8 acyl-CoA thioesterase 8 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(MGI:2156286|PMID:11673457)
(PMID:21873635)
InterPro
MGI
Ensembl
GO_Central
PMID:11673457 PMID:21873635 GO_REF:0000002 GO_REF:0000107 MGI:2156286 NCBI chr24:33,149,415...33,163,086
Ensembl chr24:33,128,290...33,163,050
JBrowse link
G ACOT9 acyl-CoA thioesterase 9 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:19,395,763...19,460,945
Ensembl chr  X:19,395,762...19,551,198
JBrowse link
G ACSM3 acyl-CoA synthetase medium chain family member 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:24,558,010...24,594,326
Ensembl chr 6:24,558,142...24,582,728
JBrowse link
G ACSM5 acyl-CoA synthetase medium chain family member 5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:24,907,766...24,943,841
Ensembl chr 6:24,907,236...24,940,862
JBrowse link
G BAAT bile acid-CoA:amino acid N-acyltransferase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:58,102,057...58,116,750
Ensembl chr11:58,102,592...58,109,389
JBrowse link
G GCDH glutaryl-CoA dehydrogenase ISO RGD PMID:6895440 RGD:1598697 NCBI chr20:49,284,341...49,290,456
Ensembl chr20:49,284,425...49,290,849
JBrowse link
G GPAM glycerol-3-phosphate acyltransferase, mitochondrial involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3619815|PMID:15878874) Ensembl
MGI
PMID:15878874 GO_REF:0000107 MGI:3619815 NCBI chr28:23,261,673...23,323,985
Ensembl chr28:23,258,428...23,298,017
JBrowse link
G GPAT4 glycerol-3-phosphate acyltransferase 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr16:23,990,142...24,022,822
Ensembl chr16:23,911,972...24,010,152
JBrowse link
G HMGCL 3-hydroxy-3-methylglutaryl-CoA lyase ISO RGD PMID:2573547 RGD:1599519 NCBI chr 2:75,688,736...75,703,095
Ensembl chr 2:75,688,827...75,702,965
JBrowse link
G HNF4A hepatocyte nuclear factor 4 alpha ISO RGD PMID:15870076 RGD:1625002 NCBI chr24:31,847,864...31,908,337
Ensembl chr24:31,847,961...31,905,916
JBrowse link
G LOC479821 acyl-coenzyme A synthetase ACSM4, mitochondrial involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:12709059 PMID:21873635 RGD:1299602 NCBI chr 6:24,616,607...24,639,441
Ensembl chr 6:24,616,610...24,639,255
JBrowse link
G LOC479822 acyl-coenzyme A synthetase ACSM2A, mitochondrial involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:24,864,952...24,893,830 JBrowse link
G LOC481634 bile acid-CoA:amino acid N-acyltransferase involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr11:58,084,951...58,103,188 JBrowse link
G LOC490770 acyl-coenzyme A thioesterase 1 involved_in IEA
ISO
IBA
hydrolysis
(PMID:21873635)
InterPro
RGD
GO_Central
PMID:7744868 PMID:21873635 GO_REF:0000002 RGD:2315867 NCBI chr 8:46,851,109...46,873,354
Ensembl chr 8:46,852,880...46,911,640
JBrowse link
G OXSM 3-oxoacyl-ACP synthase, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:18,034,532...18,045,630
Ensembl chr23:18,034,526...18,045,217
JBrowse link
G TNNC2 troponin C2, fast skeletal type involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr24:33,136,644...33,139,289
Ensembl chr24:33,128,290...33,163,050
JBrowse link
adenine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100856570 phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr31:28,133,546...28,165,595 JBrowse link
G LOC487740 trifunctional purine biosynthetic protein adenosine-3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr31:29,032,399...29,063,706 JBrowse link
adenine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APRT adenine phosphoribosyltransferase acts_upstream_of_or_within ISO (MGI:83266|PMID:8894695)
(MGI:80735|PMID:8643571), (MGI:83266|PMID:8894695)
MGI PMID:8643571 PMID:8894695 MGI:80735 MGI:83266 NCBI chr 5:64,563,154...64,565,537
Ensembl chr 5:64,563,192...64,565,445
JBrowse link
G HPRT1 hypoxanthine phosphoribosyltransferase 1 acts_upstream_of_or_within ISO (MGI:83266|PMID:8894695) MGI PMID:8894695 MGI:83266 NCBI chr  X:105,115,732...105,153,702
Ensembl chr  X:105,115,732...105,153,702
JBrowse link
adenine salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APRT adenine phosphoribosyltransferase involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:85816|PMID:8864750)
GO_Central
MGI
PMID:8864750 PMID:21873635 MGI:85816 NCBI chr 5:64,563,154...64,565,537
Ensembl chr 5:64,563,192...64,565,445
JBrowse link
G HPRT1 hypoxanthine phosphoribosyltransferase 1 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:1331314|PMID:10037486)
GO_Central
MGI
PMID:10037486 PMID:21873635 MGI:1331314 NCBI chr  X:105,115,732...105,153,702
Ensembl chr  X:105,115,732...105,153,702
JBrowse link
adenosine 5'-(hexahydrogen pentaphosphate) catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC491890 diphosphoinositol polyphosphate phosphohydrolase 3-beta involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:44,061,199...44,068,750 JBrowse link
G NUDT3 nudix hydrolase 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:3,559,347...3,687,026
Ensembl chr12:3,567,206...3,687,026
JBrowse link
G NUDT4 nudix hydrolase 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:33,627,441...33,644,350
Ensembl chr15:33,627,846...33,641,795
JBrowse link
adenosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5E 5'-nucleotidase ecto involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3770326|PMID:16547283) Ensembl
MGI
PMID:16547283 GO_REF:0000107 MGI:3770326 NCBI chr12:45,491,028...45,520,019
Ensembl chr12:45,491,733...45,518,405
JBrowse link
adenosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
(PMID:21873635)
(MGI:1095761|PMID:9272950), (MGI:3531253|PMID:8663040), (MGI:3808984|PMID:2015347), (MGI:49990|PMID:1618849), (MGI:59127|PMID:2387582), (MGI:76875|PMID:7592575), (MGI:83255|PMID:8894685)
(MGI:1861066|PMID:10899903), (MGI:2155238|PMID:9478961), (MGI:3525377|PMID:15630442), (MGI:3619310|PMID:14607964), (MGI:3640719|PMID:10720488), (MGI:3664521|PMID:16841096), (MGI:3794903|PMID:18340377)
(MGI:74163|PMID:7670465)
(MGI:2151677|PMID:11591798), (MGI:3531253|PMID:8663040)
(MGI:1095761|PMID:9272950), (MGI:72798|PMID:7731963)
GO_Central
MGI
Ensembl
PMID:1618849 PMID:2015347 PMID:2387582 PMID:7592575 PMID:7670465 PMID:7731963 PMID:8663040 PMID:8894685 PMID:9272950 PMID:9478961 PMID:10720488 PMID:10899903 PMID:11591798 PMID:14607964 PMID:15630442 PMID:16841096 PMID:18340377 PMID:21873635 GO_REF:0000107 MGI:1095761 MGI:1861066 MGI:2151677 MGI:2155238 MGI:3525377 MGI:3531253 MGI:3619310 MGI:3640719 MGI:3664521 MGI:3794903 MGI:3808984 MGI:49990 MGI:59127 MGI:72798 MGI:74163 MGI:76875 MGI:83255 NCBI chr24:32,083,786...32,119,810
Ensembl chr24:32,083,931...32,111,160
JBrowse link
G ADA2 adenosine deaminase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr27:44,883,573...44,912,930
Ensembl chr27:44,884,882...44,912,850
JBrowse link
G ADAL adenosine deaminase like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr30:10,191,019...10,214,089
Ensembl chr30:10,194,606...10,216,875
JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:24,900,708...24,960,748
Ensembl chr17:24,901,447...24,971,935
JBrowse link
adenosine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACP3 acid phosphatase 3 involved_in IEA
ISS
Ensembl
UniProt
GO_REF:0000024 GO_REF:0000107 NCBI chr23:29,294,641...29,353,970
Ensembl chr23:29,294,843...29,343,499
JBrowse link
G ADA adenosine deaminase ISO RGD PMID:3746429 PMID:4462574 PMID:6815190 PMID:12675911 RGD:2291853 RGD:2291855 RGD:2291857 RGD:2291861 NCBI chr24:32,083,786...32,119,810
Ensembl chr24:32,083,931...32,111,160
JBrowse link
G ADK adenosine kinase ISO RGD PMID:12675911 RGD:2291861 NCBI chr 4:24,540,626...25,047,032
Ensembl chr 4:24,540,659...25,046,464
JBrowse link
G NT5C1A 5'-nucleotidase, cytosolic IA involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:12675911 PMID:21873635 RGD:2291861 NCBI chr15:3,209,771...3,230,104
Ensembl chr15:3,209,869...3,222,983
JBrowse link
G NT5C1B 5'-nucleotidase, cytosolic IB involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:12675911 PMID:21873635 RGD:2291861 NCBI chr17:13,848,736...13,870,933 JBrowse link
G NT5C2 5'-nucleotidase, cytosolic II involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:12675911 PMID:21873635 RGD:2291861 NCBI chr28:15,525,581...15,621,287
Ensembl chr28:15,526,790...15,621,235
JBrowse link
G NT5C3A 5'-nucleotidase, cytosolic IIIA ISO RGD PMID:12675911 RGD:2291861 NCBI chr14:45,076,487...45,132,000
Ensembl chr14:45,077,099...45,131,905
JBrowse link
G NT5E 5'-nucleotidase ecto ISO RGD PMID:12675911 RGD:2291861 NCBI chr12:45,491,028...45,520,019
Ensembl chr12:45,491,733...45,518,405
JBrowse link
G PTGDR prostaglandin D2 receptor acts_upstream_of_or_within ISO (MGI:3761771|PMID:11562489) MGI PMID:11562489 MGI:3761771 NCBI chr 8:28,480,446...28,491,331
Ensembl chr 8:28,480,478...28,488,855
JBrowse link
ADP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK1 adenylate kinase 1 involved_in IEA
ISO
UniProt
RGD
PMID:19049516 GO_REF:0000104 RGD:5134369 NCBI chr 9:55,539,179...55,548,132
Ensembl chr 9:55,539,260...55,548,132
JBrowse link
G AK2 adenylate kinase 2 involved_in IEA
ISO
UniProt
RGD
PMID:5123889 GO_REF:0000104 RGD:5490208 NCBI chr 2:68,342,769...68,371,769
Ensembl chr 2:68,350,057...68,371,090
JBrowse link
G AK3 adenylate kinase 3 involved_in IEA UniProt GO_REF:0000104 NCBI chr 1:93,086,617...93,095,023 JBrowse link
G AK4 adenylate kinase 4 involved_in IEA UniProt GO_REF:0000104 NCBI chr 5:45,055,294...45,119,595
Ensembl chr 5:44,884,283...45,120,203
JBrowse link
G LOC480491 GTP:AMP phosphotransferase AK3, mitochondrial involved_in IEA
ISO
UniProt
RGD
PMID:5010295 PMID:5123889 GO_REF:0000104 RGD:5490208 RGD:5490216 NCBI chr 9:10,282,452...10,283,479 JBrowse link
ADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMPD3 adenosine monophosphate deaminase 3 involved_in ISO (MGI:5917829|PMID:28746349) MGI PMID:28746349 MGI:5917829
G ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 involved_in ISO (MGI:3760051|PMID:17502665) MGI PMID:17502665 MGI:3760051 NCBI chr28:9,181,851...9,311,835
Ensembl chr28:9,211,050...9,323,939
JBrowse link
G NT5E 5'-nucleotidase ecto involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:45,491,028...45,520,019
Ensembl chr12:45,491,733...45,518,405
JBrowse link
G NUDT9 nudix hydrolase 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2158549|PMID:11825615) Ensembl
MGI
PMID:11825615 GO_REF:0000107 MGI:2158549 NCBI chr32:10,862,532...10,887,162
Ensembl chr32:10,862,527...10,886,863
JBrowse link
ADP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMPD3 adenosine monophosphate deaminase 3 involved_in
acts_upstream_of_or_within
ISO (MGI:5529149|PMID:23078545)
(MGI:5476853|PMID:23439682)
CACAO
MGI
PMID:23078545 PMID:23439682 MGI:5476853 MGI:5529149
G BAD BCL2 associated agonist of cell death involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:52,781,335...52,791,789
Ensembl chr18:52,781,921...52,791,405
JBrowse link
alanyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AARS1 alanyl-tRNA synthetase 1 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3640843|PMID:16906134)
GO_Central
MGI
RGD
PMID:2040280 PMID:16906134 PMID:21873635 MGI:3640843 RGD:2302982 NCBI chr 5:76,288,780...76,343,262
Ensembl chr 5:76,288,782...76,343,207
JBrowse link
G AARS2 alanyl-tRNA synthetase 2, mitochondrial involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr12:12,706,043...12,718,821
Ensembl chr12:12,704,983...12,718,821
JBrowse link
alcohol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADH4 alcohol dehydrogenase 4 (class II), pi polypeptide involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1346361|PMID:10514444) Ensembl
MGI
PMID:10514444 GO_REF:0000107 MGI:1346361 NCBI chr32:21,282,526...21,299,387
Ensembl chr32:21,282,890...21,299,328
JBrowse link
alcohol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADH4 alcohol dehydrogenase 4 (class II), pi polypeptide involved_in ISO (PMID:3466164) UniProt PMID:3466164 NCBI chr32:21,282,526...21,299,387
Ensembl chr32:21,282,890...21,299,328
JBrowse link
G DHRS4 dehydrogenase/reductase 4 involved_in ISO (PMID:18571493) UniProt PMID:18571493 NCBI chr 8:4,046,532...4,058,498
Ensembl chr 8:4,046,544...4,084,744
JBrowse link
aldosterone biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNA1H calcium voltage-gated channel subunit alpha1 H involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:39,510,129...39,533,129
Ensembl chr 6:39,510,121...39,533,753
JBrowse link
G CYP11B2 cytochrome P450, family 11, subfamily B, polypeptide 2 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:50073|PMID:1686470), (MGI:80407|PMID:8645611)
GO_Central
MGI
PMID:1686470 PMID:8645611 PMID:21873635 MGI:50073 MGI:80407 NCBI chr13:36,866,476...36,880,625 JBrowse link
aldosterone metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SCNN1B sodium channel epithelial 1 subunit beta involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:6478095|PMID:28567665) Ensembl
MGI
PMID:28567665 GO_REF:0000107 MGI:6478095 NCBI chr 6:22,439,643...22,481,349
Ensembl chr 6:22,439,643...22,481,349
JBrowse link
alpha-amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AADAT aminoadipate aminotransferase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr25:20,920,118...20,944,251
Ensembl chr25:20,920,139...20,945,387
JBrowse link
amino acid activation for nonribosomal peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASDH aminoadipate-semialdehyde dehydrogenase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5630050|PMID:24467666) Ensembl
MGI
PMID:24467666 GO_REF:0000107 MGI:5630050 NCBI chr13:48,574,839...48,611,770
Ensembl chr13:48,572,220...48,611,775
JBrowse link
ammonia assimilation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASL argininosuccinate lyase acts_upstream_of_or_within ISO (MGI:3604426|PMID:12559843) MGI PMID:12559843 MGI:3604426 NCBI chr 6:768,522...779,144
Ensembl chr 6:730,358...779,424
JBrowse link
G GLUL glutamate-ammonia ligase ISO RGD PMID:28323 RGD:2301547 NCBI chr 7:15,730,898...15,740,241
Ensembl chr 7:15,730,898...15,740,241
JBrowse link
AMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADSL adenylosuccinate lyase involved_in ISO (PMID:11428554) RGD
UniProt
PMID:3759987 PMID:11428554 RGD:5135303 NCBI chr10:24,813,854...24,832,115 JBrowse link
G ADSS1 adenylosuccinate synthase 1 involved_in ISO (PMID:15786719) UniProt PMID:15786719 NCBI chr 8:72,288,246...72,305,479
Ensembl chr 8:72,288,323...72,305,479
JBrowse link
G ADSS2 adenylosuccinate synthase 2 involved_in
acts_upstream_of_or_within
ISO (PMID:2004783)
(MGI:64874|PMID:8308018)
UniProt
MGI
PMID:2004783 PMID:8308018 MGI:64874 NCBI chr 7:35,440,250...35,477,470
Ensembl chr 7:35,440,676...35,476,795
JBrowse link
G NUDT2 nudix hydrolase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:51,049,992...51,064,317
Ensembl chr11:51,050,053...51,064,178
JBrowse link
G PRPS1 phosphoribosyl pyrophosphate synthetase 1 ISO RGD PMID:2546925 RGD:5134985 NCBI chr  X:81,150,537...81,171,521
Ensembl chr  X:81,150,536...81,212,689
JBrowse link
G PRPS2 phosphoribosyl pyrophosphate synthetase 2 ISO RGD PMID:2546925 RGD:5134985 NCBI chr  X:9,281,686...9,326,551
Ensembl chr  X:9,281,730...9,418,289
JBrowse link
AMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:32,083,786...32,119,810
Ensembl chr24:32,083,931...32,111,160
JBrowse link
G AMPD3 adenosine monophosphate deaminase 3 involved_in ISO (MGI:5917829|PMID:28746349) MGI PMID:28746349 MGI:5917829
G NT5C1B 5'-nucleotidase, cytosolic IB involved_in ISO (MGI:2153435|PMID:11690631) MGI PMID:11690631 MGI:2153435 NCBI chr17:13,848,736...13,870,933 JBrowse link
G NT5E 5'-nucleotidase ecto involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3770326|PMID:16547283)
GO_Central
MGI
RGD
PMID:16547283 PMID:21414400 PMID:21873635 MGI:3770326 RGD:5134346 NCBI chr12:45,491,028...45,520,019
Ensembl chr12:45,491,733...45,518,405
JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:24,900,708...24,960,748
Ensembl chr17:24,901,447...24,971,935
JBrowse link
AMP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK1 adenylate kinase 1 involved_in IEA
ISO
UniProt
RGD
PMID:19049516 GO_REF:0000104 RGD:5134369 NCBI chr 9:55,539,179...55,548,132
Ensembl chr 9:55,539,260...55,548,132
JBrowse link
G AK2 adenylate kinase 2 involved_in IEA
ISO
UniProt
RGD
PMID:5010295 GO_REF:0000104 RGD:5490216 NCBI chr 2:68,342,769...68,371,769
Ensembl chr 2:68,350,057...68,371,090
JBrowse link
G AK3 adenylate kinase 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:93,086,617...93,095,023 JBrowse link
G AK4 adenylate kinase 4 involved_in IEA UniProt GO_REF:0000104 NCBI chr 5:45,055,294...45,119,595
Ensembl chr 5:44,884,283...45,120,203
JBrowse link
G AMPD1 adenosine monophosphate deaminase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:52,377,411...52,399,525
Ensembl chr17:52,377,402...52,399,520
JBrowse link
G AMPD2 adenosine monophosphate deaminase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:42,239,809...42,251,704
Ensembl chr 6:42,210,025...42,251,950
JBrowse link
G AMPD3 adenosine monophosphate deaminase 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 Ensembl chr21:33,611,637...33,764,862 JBrowse link
G AMPD3 adenosine monophosphate deaminase 3 involved_in
acts_upstream_of_or_within
ISO (MGI:5529149|PMID:23078545)
(MGI:5476853|PMID:23439682)
CACAO
MGI
PMID:23078545 PMID:23439682 MGI:5476853 MGI:5529149
G LOC480491 GTP:AMP phosphotransferase AK3, mitochondrial involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:10,282,452...10,283,479 JBrowse link
AMP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK9 adenylate kinase 9 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:66,381,215...66,508,559
Ensembl chr12:66,389,190...66,500,273
JBrowse link
G LOC480491 GTP:AMP phosphotransferase AK3, mitochondrial ISO RGD PMID:5484813 RGD:2301093 NCBI chr 9:10,282,452...10,283,479 JBrowse link
AMP salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADK adenosine kinase involved_in IEA UniProt GO_REF:0000041 NCBI chr 4:24,540,626...25,047,032
Ensembl chr 4:24,540,659...25,046,464
JBrowse link
G APRT adenine phosphoribosyltransferase involved_in IEA
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000041 NCBI chr 5:64,563,154...64,565,537
Ensembl chr 5:64,563,192...64,565,445
JBrowse link
anthranilate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G KMO kynurenine 3-monooxygenase involved_in IEA UniProt GO_REF:0000104 NCBI chr 7:32,941,487...32,994,541
Ensembl chr 7:32,941,487...32,994,541
JBrowse link
G KYNU kynureninase involved_in IEA
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000104 NCBI chr19:45,022,450...45,150,977
Ensembl chr19:45,022,072...45,149,339
JBrowse link
arachidonic acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALOX12 arachidonate 12-lipoxygenase, 12S type involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:32,026,193...32,038,698
Ensembl chr 5:31,882,501...32,038,119
JBrowse link
G ALOX12B arachidonate 12-lipoxygenase, 12R type involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 5:32,899,416...32,911,442
Ensembl chr 5:32,896,238...32,911,552
JBrowse link
G ALOX15 arachidonate 15-lipoxygenase involved_in IEA
ISO
IBA
(PMID:21873635) Ensembl
RGD
GO_Central
PMID:8117750 PMID:21873635 GO_REF:0000107 RGD:70288 NCBI chr 5:31,883,544...31,891,357
Ensembl chr 5:31,882,501...32,038,119
JBrowse link
G ALOX15B arachidonate 15-lipoxygenase type B involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 5:32,878,348...32,888,253
Ensembl chr 5:32,878,338...32,888,316
JBrowse link
G ALOX5 arachidonate 5-lipoxygenase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr28:2,170,920...2,218,765
Ensembl chr28:2,170,920...2,219,609
JBrowse link
G ALOXE3 arachidonate lipoxygenase 3 involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr 5:32,917,681...32,941,470
Ensembl chr 5:32,918,065...32,941,752
JBrowse link
G CYP1A2 cytochrome P450 family 1 subfamily A member 2 involved_in IEA UniProt GO_REF:0000041 NCBI chr30:37,818,400...37,824,192
Ensembl chr30:37,799,140...37,824,135
JBrowse link
G CYP1B1 cytochrome P450 family 1 subfamily B member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:30,273,281...30,278,554
Ensembl chr17:30,272,749...30,278,554
JBrowse link
G CYP2C18 cytochrome P450 2C21 acts_upstream_of_or_within ISO (MGI:3665447|PMID:15102943) MGI PMID:15102943 MGI:3665447 NCBI chr28:8,727,010...8,750,427
Ensembl chr28:8,727,019...8,750,587
JBrowse link
G CYP2D15 cytochrome P450 family 2 subfamily D member 15 involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:10945868 PMID:21873635 RGD:1599723 NCBI chr10:23,255,259...23,259,380
Ensembl chr10:23,255,249...23,259,298
JBrowse link
G CYP2J2 cytochrome P450 family 2 subfamily J member 2 ISO RGD PMID:9143331 RGD:632631 NCBI chr 5:49,942,241...49,986,603
Ensembl chr 5:49,942,193...49,984,617
JBrowse link
G CYP4A37 cytochrome P450 4A37 ISO RGD PMID:12857783 RGD:1625451 NCBI chr15:13,604,130...13,623,797 JBrowse link
G DAGLA diacylglycerol lipase alpha involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4437165|PMID:20147530) Ensembl
MGI
PMID:20147530 GO_REF:0000107 MGI:4437165 NCBI chr18:54,727,932...54,754,077
Ensembl chr18:54,730,454...54,752,646
JBrowse link
G DAGLB diacylglycerol lipase beta involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4437165|PMID:20147530) Ensembl
MGI
PMID:20147530 GO_REF:0000107 MGI:4437165 NCBI chr 6:11,761,470...11,791,936
Ensembl chr 6:11,761,788...11,791,838
JBrowse link
G EPHX1 epoxide hydrolase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:38,964,319...39,004,902
Ensembl chr 7:38,964,338...38,999,238
JBrowse link
G FADS1 fatty acid desaturase 1 ISO RGD PMID:11414679 RGD:632758 NCBI chr18:54,659,406...54,672,803
Ensembl chr18:54,659,406...54,670,623
JBrowse link
G GPX1 glutathione peroxidase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:39,889,165...39,890,253
Ensembl chr20:39,889,174...39,890,260
JBrowse link
G GPX4 glutathione peroxidase 4 involved_in ISO (PMID:11115402) UniProt PMID:11115402
G MAPK3 mitogen-activated protein kinase 3 ISO RGD PMID:15027896 RGD:1626220 NCBI chr 6:18,109,184...18,115,728
Ensembl chr 6:18,109,222...18,114,425
JBrowse link
G MGLL monoglyceride lipase involved_in ISO (MGI:4836780|PMID:20729846) UniProt PMID:20729846 MGI:4836780 NCBI chr20:1,765,650...1,880,710
Ensembl chr20:1,766,216...1,943,588
JBrowse link
G PLA2G2F phospholipase A2 group IIF involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:78,714,251...78,724,257
Ensembl chr 2:78,716,228...78,723,984
JBrowse link
G PLA2G4A phospholipase A2 group IVA involved_in IEA
ISO
Ensembl
RGD
PMID:16603549 GO_REF:0000107 RGD:1642459 NCBI chr 7:19,804,412...19,955,215
Ensembl chr 7:19,832,664...19,966,936
JBrowse link
G PNPLA8 patatin like phospholipase domain containing 8 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:12,134,921...12,181,496
Ensembl chr18:12,141,830...12,179,974
JBrowse link
arginine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASS1 argininosuccinate synthase 1 involved_in IBA
ISO
IEA
(PMID:21873635) GO_Central
RGD
UniProt
PMID:12470967 PMID:21873635 GO_REF:0000041 RGD:631755 NCBI chr 9:53,425,228...53,478,007
Ensembl chr 9:53,425,448...53,477,904
JBrowse link
G NAGS N-acetylglutamate synthase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:19,344,073...19,349,395
Ensembl chr 9:19,344,902...19,349,207
JBrowse link
arginine biosynthetic process via ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASL argininosuccinate lyase involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 6:768,522...779,144
Ensembl chr 6:730,358...779,424
JBrowse link
G GUSB glucuronidase beta involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:730,345...743,916
Ensembl chr 6:730,358...779,424
JBrowse link
G OTC ornithine transcarbamylase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:33,130,921...33,200,441
Ensembl chr  X:33,131,040...33,199,595
JBrowse link
arginine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDAH1 dimethylarginine dimethylaminohydrolase 1 involved_in IEA Ensembl
InterPro
GO_REF:0000002 GO_REF:0000107 NCBI chr 6:62,548,852...62,683,687
Ensembl chr 6:62,549,152...62,683,729
JBrowse link
G DDAH2 dimethylarginine dimethylaminohydrolase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr12:1,206,180...1,209,459
Ensembl chr12:1,206,309...1,208,389
JBrowse link
G FAH fumarylacetoacetate hydrolase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1929783|PMID:11209059) Ensembl
MGI
PMID:11209059 GO_REF:0000107 MGI:1929783 NCBI chr 3:57,300,422...57,326,546
Ensembl chr 3:57,300,441...57,326,486
JBrowse link
G NOS1 nitric oxide synthase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr26:13,787,341...13,895,176
Ensembl chr26:13,786,309...13,962,332
JBrowse link
G NOS2 nitric oxide synthase 2 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr 9:42,171,821...42,210,217
Ensembl chr 9:42,171,821...42,208,588
JBrowse link
G NOS3 nitric oxide synthase 3 involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr16:15,054,196...15,072,454
Ensembl chr16:15,011,344...15,072,277
JBrowse link
arginine catabolic process to glutamate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OAT ornithine aminotransferase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr28:33,763,661...33,788,817
Ensembl chr28:33,758,473...33,788,759
JBrowse link
arginine catabolic process to ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARG1 arginase 1 involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:15753084 PMID:21873635 RGD:8693655 NCBI chr12:242,717...255,736
Ensembl chr12:242,714...255,305
JBrowse link
G ARG2 arginase 2 involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:15753084 PMID:21873635 RGD:8693655 NCBI chr 8:41,588,051...41,619,406
Ensembl chr 8:41,588,150...41,619,402
JBrowse link
arginine catabolic process to proline via ornithine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OAT ornithine aminotransferase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr28:33,763,661...33,788,817
Ensembl chr28:33,758,473...33,788,759
JBrowse link
arginine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARG1 arginase 1 ISO RGD PMID:4062872 RGD:2300098 NCBI chr12:242,717...255,736
Ensembl chr12:242,714...255,305
JBrowse link
G ARG2 arginase 2 involved_in IEA
ISO
UniProt
RGD
PMID:16537391 GO_REF:0000043 RGD:1582129 NCBI chr 8:41,588,051...41,619,406
Ensembl chr 8:41,588,150...41,619,402
JBrowse link
G DDAH1 dimethylarginine dimethylaminohydrolase 1 involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:17322279 PMID:21873635 RGD:1625578 NCBI chr 6:62,548,852...62,683,687
Ensembl chr 6:62,549,152...62,683,729
JBrowse link
G DDAH2 dimethylarginine dimethylaminohydrolase 2 involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:17322279 PMID:21873635 RGD:1625578 NCBI chr12:1,206,180...1,209,459
Ensembl chr12:1,206,309...1,208,389
JBrowse link
G SLC39A8 solute carrier family 39 member 8 involved_in
acts_upstream_of
IEA
ISO
(MGI:5912781|PMID:28481222) Ensembl
UniProt
PMID:28481222 GO_REF:0000107 MGI:5912781 NCBI chr32:23,727,920...23,801,459
Ensembl chr32:23,729,476...23,800,941
JBrowse link
argininosuccinate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASL argininosuccinate lyase ISO RGD PMID:4062872 PMID:8586639 RGD:1599287 RGD:2300098 NCBI chr 6:768,522...779,144
Ensembl chr 6:730,358...779,424
JBrowse link
G ASS1 argininosuccinate synthase 1 involved_in IBA
IEA
ISO
(PMID:21873635) GO_Central
Ensembl
RGD
PMID:4062872 PMID:21873635 GO_REF:0000107 RGD:2300098 NCBI chr 9:53,425,228...53,478,007
Ensembl chr 9:53,425,448...53,477,904
JBrowse link
arginyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DALRD3 DALR anticodon binding domain containing 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr20:40,145,239...40,148,731
Ensembl chr20:40,145,700...40,148,729
JBrowse link
G RARS1 arginyl-tRNA synthetase 1 involved_in IEA
ISO
IBA
(PMID:21873635) InterPro
RGD
GO_Central
PMID:7082655 PMID:21873635 GO_REF:0000002 RGD:2303394 NCBI chr 4:43,237,499...43,260,738
Ensembl chr 4:43,237,499...43,260,677
JBrowse link
G RARS2 arginyl-tRNA synthetase 2, mitochondrial involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr12:46,993,787...47,047,295
Ensembl chr12:46,992,959...47,047,240
JBrowse link
aromatic amino acid family metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HPD 4-hydroxyphenylpyruvate dioxygenase involved_in IEA InterPro GO_REF:0000002 NCBI chr26:7,430,891...7,440,643
Ensembl chr26:7,430,933...7,440,611
JBrowse link
G HPDL 4-hydroxyphenylpyruvate dioxygenase like involved_in IEA InterPro GO_REF:0000002 NCBI chr15:15,019,273...15,028,932
Ensembl chr15:15,027,472...15,028,671
JBrowse link
G TH tyrosine hydroxylase involved_in IEA InterPro GO_REF:0000002 NCBI chr18:46,327,136...46,334,973
Ensembl chr18:46,327,137...46,335,602
JBrowse link
G TPH1 tryptophan hydroxylase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr21:40,545,379...40,571,620
Ensembl chr21:40,547,682...40,566,572
JBrowse link
G TPH2 tryptophan hydroxylase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr10:13,442,611...13,526,537
Ensembl chr10:13,442,611...13,527,243
JBrowse link
arsonoacetate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AS3MT arsenite methyltransferase involved_in ISO (PMID:25997655)
PMID:11790780
UniProt PMID:11790780 PMID:25997655 RGD:625365 NCBI chr28:15,334,141...15,350,749 JBrowse link
G BORCS7 BLOC-1 related complex subunit 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:15,314,219...15,324,522
Ensembl chr28:15,314,266...15,350,714
JBrowse link
G N6AMT1 N-6 adenine-specific DNA methyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:23,895,558...23,934,183
Ensembl chr31:23,895,584...23,909,940
JBrowse link
asparagine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASNS asparagine synthetase (glutamine-hydrolyzing) involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:2887559 PMID:21873635 RGD:2316002 NCBI chr14:22,718,020...22,734,109
Ensembl chr14:22,718,042...22,734,054
JBrowse link
G ASNSD1 asparagine synthetase domain containing 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr37:426,366...430,668
Ensembl chr37:426,367...439,619
JBrowse link
asparagine catabolic process via L-aspartate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASRGL1 asparaginase and isoaspartyl peptidase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:54,215,920...54,238,094
Ensembl chr18:54,216,926...54,238,059
JBrowse link
asparagine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASPG asparaginase involved_in ISO PMID:9575212 UniProt PMID:9575212 RGD:1299414 NCBI chr 8:71,747,319...71,764,570
Ensembl chr 8:71,753,164...71,765,349
JBrowse link
G NIT2 nitrilase family member 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr33:6,944,340...6,960,540
Ensembl chr33:6,944,374...6,959,074
JBrowse link
asparaginyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GAB2 GRB2 associated binding protein 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr21:20,414,903...20,605,807
Ensembl chr21:20,277,507...20,606,736
JBrowse link
G NARS1 asparaginyl-tRNA synthetase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:18,320,941...18,338,185
Ensembl chr 1:18,321,021...18,337,430
JBrowse link
G NARS2 asparaginyl-tRNA synthetase 2, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chr21:20,277,707...20,413,624
Ensembl chr21:20,277,507...20,606,736
JBrowse link
aspartate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:53641|PMID:4193185)
GO_Central
MGI
PMID:4193185 PMID:21873635 MGI:53641 NCBI chr28:12,352,658...12,377,960
Ensembl chr28:12,352,659...12,414,579
JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 acts_upstream_of_or_within ISO (MGI:53641|PMID:4193185) MGI PMID:4193185 MGI:53641 NCBI chr 2:57,968,833...57,994,219
Ensembl chr 2:57,968,833...57,994,218
JBrowse link
aspartate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DDO D-aspartate oxidase involved_in ISO (PMID:9163533) UniProt PMID:9163533 NCBI chr12:67,080,646...67,104,429
Ensembl chr12:67,081,329...67,104,397
JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:12,352,658...12,377,960
Ensembl chr28:12,352,659...12,414,579
JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:57,968,833...57,994,219
Ensembl chr 2:57,968,833...57,994,218
JBrowse link
aspartate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADSS1 adenylosuccinate synthase 1 ISO RGD PMID:3759987 RGD:5135303 NCBI chr 8:72,288,246...72,305,479
Ensembl chr 8:72,288,323...72,305,479
JBrowse link
G ADSS2 adenylosuccinate synthase 2 ISO RGD PMID:71897 RGD:5135533 NCBI chr 7:35,440,250...35,477,470
Ensembl chr 7:35,440,676...35,476,795
JBrowse link
G ASS1 argininosuccinate synthase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:53,425,228...53,478,007
Ensembl chr 9:53,425,448...53,477,904
JBrowse link
G DDO D-aspartate oxidase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3617951|PMID:16525061) Ensembl
MGI
PMID:16525061 GO_REF:0000107 MGI:3617951 NCBI chr12:67,080,646...67,104,429
Ensembl chr12:67,081,329...67,104,397
JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 ISO RGD PMID:2837211 RGD:2289377 NCBI chr28:12,352,658...12,377,960
Ensembl chr28:12,352,659...12,414,579
JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 ISO RGD PMID:12686151 RGD:2289396 NCBI chr 2:57,968,833...57,994,219
Ensembl chr 2:57,968,833...57,994,218
JBrowse link
aspartyl-tRNA aminoacylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DARS1 aspartyl-tRNA synthetase 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr19:38,690,170...38,751,360
Ensembl chr19:38,668,527...38,751,310
JBrowse link
ATP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDOA aldolase, fructose-bisphosphate A involved_in ISO (PMID:14615364) BHF-UCL PMID:14615364 NCBI chr 6:18,077,241...18,083,053 JBrowse link
G ATP5F1A ATP synthase F1 subunit alpha involved_in ISO (PMID:21106936) CAFA PMID:21106936 NCBI chr 7:45,118,188...45,127,048
Ensembl chr 7:45,117,657...45,127,048
JBrowse link
G ATP5F1B ATP synthase F1 subunit beta involved_in ISO (PMID:17510399), (PMID:21106936) CAFA PMID:17510399 PMID:21106936 NCBI chr10:870,405...876,937
Ensembl chr10:870,392...909,161
JBrowse link
G ATP5J2 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:10,128,623...10,172,377 JBrowse link
G ATP5MC1 ATP synthase membrane subunit c locus 1 ISO RGD PMID:22209705 RGD:13800744 NCBI chr 9:25,123,194...25,125,959
Ensembl chr 9:25,123,241...25,127,909
JBrowse link
G ATP5PO ATP synthase peripheral stalk subunit OSCP ISO RGD PMID:7864899 RGD:14696824 NCBI chr31:28,472,106...28,481,759 JBrowse link
G B9D2 B9 domain containing 2 involved_in ISS AgBase GO_REF:0000024 NCBI chr 1:112,621,832...112,627,726
Ensembl chr 1:112,621,633...112,643,885
JBrowse link
G DGUOK deoxyguanosine kinase ISO RGD PMID:30404003 RGD:15039296 NCBI chr17:49,107,085...49,139,366
Ensembl chr17:49,104,546...49,168,782
JBrowse link
G LDHC lactate dehydrogenase C involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3775056|PMID:18367675) Ensembl
MGI
PMID:18367675 GO_REF:0000107 MGI:3775056 NCBI chr21:40,844,644...40,890,407
Ensembl chr21:40,844,662...40,890,398
JBrowse link
G NUDT2 nudix hydrolase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr11:51,049,992...51,064,317
Ensembl chr11:51,050,053...51,064,178
JBrowse link
G PKLR pyruvate kinase L/R ISO RGD PMID:4273555 PMID:5492954 RGD:2302789 RGD:2302790 NCBI chr 7:42,263,899...42,272,770
Ensembl chr 7:42,263,761...42,272,755
JBrowse link
G PKM pyruvate kinase M1/2 ISO RGD PMID:4273555 RGD:2302790 NCBI chr30:35,712,853...35,737,643 JBrowse link
G SLC25A13 solute carrier family 25 member 13 involved_in ISO (PMID:12851387) UniProt PMID:12851387 NCBI chr14:21,295,651...21,481,767
Ensembl chr14:21,296,512...21,482,236
JBrowse link
G TGFB1 transforming growth factor beta 1 involved_in ISS AgBase GO_REF:0000024 NCBI chr 1:112,629,476...112,643,885
Ensembl chr 1:112,621,633...112,643,885
JBrowse link
ATP generation from ADP term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK9 adenylate kinase 9 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:66,381,215...66,508,559
Ensembl chr12:66,389,190...66,500,273
JBrowse link
ATP synthesis coupled proton transport term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP5F1A ATP synthase F1 subunit alpha involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 7:45,118,188...45,127,048
Ensembl chr 7:45,117,657...45,127,048
JBrowse link
G ATP5F1B ATP synthase F1 subunit beta involved_in IEA InterPro
GOC
GO_REF:0000002 GO_REF:0000108 NCBI chr10:870,405...876,937
Ensembl chr10:870,392...909,161
JBrowse link
G ATP5F1C ATP synthase F1 subunit gamma involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr 2:28,306,857...28,325,149
Ensembl chr 2:28,306,857...28,325,116
JBrowse link
G ATP5F1D ATP synthase F1 subunit delta involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr20:57,547,575...57,550,110
Ensembl chr20:57,547,371...57,549,722
JBrowse link
G ATP5MC1 ATP synthase membrane subunit c locus 1 involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 9:25,123,194...25,125,959
Ensembl chr 9:25,123,241...25,127,909
JBrowse link
G ATP5MC2 ATP synthase membrane subunit c locus 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr27:1,569,776...1,577,713 JBrowse link
G ATP5MC3 ATP synthase membrane subunit c locus 3 involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr36:19,131,184...19,134,350 JBrowse link
G ATP5ME ATP synthase membrane subunit e involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:108,285,208...108,285,423 JBrowse link
G ATP5MG ATP synthase membrane subunit g involved_in IEA UniProt GO_REF:0000104 NCBI chr 5:15,329,060...15,336,344 JBrowse link
G ATP5PF ATP synthase peripheral stalk subunit F6 involved_in IEA InterPro GO_REF:0000002 NCBI chr31:21,207,080...21,212,220
Ensembl chr31:21,200,337...21,215,975
JBrowse link
G ATP5PO ATP synthase peripheral stalk subunit OSCP involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr31:28,472,106...28,481,759 JBrowse link
G ATP6V1A ATPase H+ transporting V1 subunit A involved_in IEA GOC GO_REF:0000108 NCBI chr33:18,038,143...18,103,649
Ensembl chr33:18,038,801...18,101,435
JBrowse link
G LOC100682717 ATP synthase F(0) complex subunit C2, mitochondrial-like involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:26,782,760...26,783,256 JBrowse link
G LOC100682783 ATP synthase-coupling factor 6, mitochondrial-like involved_in IEA InterPro GO_REF:0000002 NCBI chr22:18,651,753...18,652,204 JBrowse link
G LOC100683222 ATP synthase subunit e, mitochondrial-like involved_in IEA InterPro GO_REF:0000002 NCBI chr  X:47,597,040...47,597,255 JBrowse link
G LOC100684996 ATP synthase subunit d, mitochondrial involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr35:1,897,600...1,898,203 JBrowse link
G LOC100685007 ATP synthase F(0) complex subunit C3, mitochondrial-like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:7,710,767...7,711,492 JBrowse link
G LOC100685227 ATP synthase F(0) complex subunit C2, mitochondrial-like involved_in IEA InterPro GO_REF:0000002 NCBI chr20:9,345,608...9,346,214 JBrowse link
G LOC100685790 ATP synthase F(0) complex subunit C2, mitochondrial-like involved_in IEA InterPro GO_REF:0000002 NCBI chr34:16,977,160...16,977,638 JBrowse link
G LOC100688796 ATP synthase F(0) complex subunit B1, mitochondrial involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000104 NCBI chr17:63,940,486...63,954,982
Ensembl chr 6:40,613,415...40,625,979
JBrowse link
G LOC100855425 ATP synthase subunit g, mitochondrial-like involved_in IEA UniProt GO_REF:0000104 NCBI chr24:17,409,360...17,409,779 JBrowse link
G LOC102151342 ATP synthase subunit d, mitochondrial-like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:66,856,651...66,857,162 JBrowse link
G LOC102154372 ATP synthase F(0) complex subunit C2, mitochondrial-like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:41,208,973...41,209,566 JBrowse link
G LOC482600 ATP synthase subunit d, mitochondrial-like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:31,994,793...31,995,275 JBrowse link
G MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr MT:7,964...8,644
Ensembl chr MT:7,964...8,644
JBrowse link
G PTGES3 prostaglandin E synthase 3 involved_in IEA InterPro GO_REF:0000002 NCBI chr10:885,744...903,814
Ensembl chr10:870,392...909,161
JBrowse link
benzoyl-CoA metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLYAT glycine-N-acyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:37,689,076...37,715,614
Ensembl chr18:37,656,675...37,715,063
JBrowse link
benzylpenicillin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCC2 ATP binding cassette subfamily C member 2 ISO RGD PMID:19255943 RGD:11081014 NCBI chr28:12,670,885...12,740,124
Ensembl chr28:12,670,885...12,740,740
JBrowse link
beta-alanine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPYD dihydropyrimidine dehydrogenase involved_in IEA UniProt GO_REF:0000041 NCBI chr 6:51,789,786...52,564,802
Ensembl chr 6:51,814,573...52,580,923
JBrowse link
beta-alanine biosynthetic process via 3-ureidopropionate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UPB1 beta-ureidopropionase 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr26:28,194,968...28,225,977
Ensembl chr26:28,195,081...28,225,567
JBrowse link
beta-alanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH6A1 aldehyde dehydrogenase 6 family member A1 ISO RGD PMID:2768248 RGD:1599052 NCBI chr 8:47,280,872...47,304,460
Ensembl chr 8:47,282,235...47,304,283
JBrowse link
beta-alanine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AASDH aminoadipate-semialdehyde dehydrogenase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5630050|PMID:24467666) Ensembl
MGI
PMID:24467666 GO_REF:0000107 MGI:5630050 NCBI chr13:48,574,839...48,611,770
Ensembl chr13:48,572,220...48,611,775
JBrowse link
G DPYS dihydropyrimidinase ISO RGD PMID:8307005 RGD:1624990 NCBI chr13:5,583,795...5,659,355
Ensembl chr13:5,583,801...5,659,463
JBrowse link
G UPB1 beta-ureidopropionase 1 ISO RGD PMID:7626590 RGD:1624989 NCBI chr26:28,194,968...28,225,977
Ensembl chr26:28,195,081...28,225,567
JBrowse link
bile acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKR1D1 aldo-keto reductase family 1 member D1 involved_in IEA InterPro GO_REF:0000002 NCBI chr16:1,499,251...1,583,965 JBrowse link
G AMACR alpha-methylacyl-CoA racemase ISO RGD PMID:11964182 RGD:704372 NCBI chr 4:73,815,438...73,836,016
Ensembl chr 4:73,815,291...73,867,437
JBrowse link
G BAAT bile acid-CoA:amino acid N-acyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:58,102,057...58,116,750
Ensembl chr11:58,102,592...58,109,389
JBrowse link
G CYP27A1 cytochrome P450 family 27 subfamily A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:25,366,475...25,401,978
Ensembl chr37:25,366,472...25,401,509
JBrowse link
G CYP39A1 cytochrome P450 family 39 subfamily A member 1 involved_in IEA
IBA
(PMID:21873635) Ensembl
GO_Central
PMID:21873635 GO_REF:0000107 NCBI chr12:14,728,289...14,818,264
Ensembl chr12:14,729,063...14,867,888
JBrowse link
G CYP7A1 cytochrome P450 family 7 subfamily A member 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000041 NCBI chr29:9,285,315...9,295,895
Ensembl chr29:9,286,181...9,332,310
JBrowse link
G CYP7B1 cytochrome P450 family 7 subfamily B member 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr29:14,443,036...14,613,839
Ensembl chr29:14,444,853...14,613,755
JBrowse link
G CYP8B1 cytochrome P450 family 8 subfamily B member 1 involved_in ISO (PMID:14643796)
(MGI:3588413|PMID:12393855)
UniProt PMID:12393855 PMID:14643796 MGI:3588413 NCBI chr23:11,965,685...11,968,994
Ensembl chr23:11,967,341...11,968,846
JBrowse link
G HNF1A HNF1 homeobox A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1933035|PMID:11279518) Ensembl
MGI
PMID:11279518 GO_REF:0000107 MGI:1933035 NCBI chr26:16,805,690...16,826,065
Ensembl chr26:16,805,690...16,824,790
JBrowse link
G HSD17B10 hydroxysteroid 17-beta dehydrogenase 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:45,165,272...45,167,683
Ensembl chr  X:45,165,272...45,167,574
JBrowse link
G PEX2 peroxisomal biogenesis factor 2 acts_upstream_of_or_within ISO (MGI:3027293|PMID:14673138) MGI PMID:14673138 MGI:3027293 NCBI chr29:24,943,563...24,960,834 JBrowse link
G SLC27A2 solute carrier family 27 member 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr30:16,155,932...16,196,919
Ensembl chr30:16,156,063...16,196,829
JBrowse link
G SLC27A5 solute carrier family 27 member 5 involved_in ISO (PMID:11980911) UniProt PMID:11980911 NCBI chr 1:99,435,140...99,438,388 JBrowse link
G STAR steroidogenic acute regulatory protein ISO RGD PMID:15382124 RGD:1600081 NCBI chr16:27,326,355...27,331,025
Ensembl chr16:27,326,355...27,331,025
JBrowse link
G ZBTB45 zinc finger and BTB domain containing 45 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:99,428,388...99,434,382
Ensembl chr 1:99,427,807...99,438,944
JBrowse link
bile acid conjugation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAAT bile acid-CoA:amino acid N-acyltransferase involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:58,102,057...58,116,750
Ensembl chr11:58,102,592...58,109,389
JBrowse link
bile acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCB11 ATP binding cassette subfamily B member 11 involved_in ISS
IEA
UniProt
Ensembl
GO_REF:0000024 GO_REF:0000107 NCBI chr36:13,742,895...13,835,312
Ensembl chr36:13,746,964...13,834,974
JBrowse link
G ACAA1 acetyl-CoA acyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:7,889,481...7,901,324
Ensembl chr23:7,889,500...7,901,229
JBrowse link
G AMACR alpha-methylacyl-CoA racemase involved_in ISO (PMID:10655068) RGD
UniProt
PMID:8020470 PMID:10655068 RGD:2315634 NCBI chr 4:73,815,438...73,836,016
Ensembl chr 4:73,815,291...73,867,437
JBrowse link
G ARV1 ARV1 homolog, fatty acid homeostasis modulator involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4849624|PMID:20663892) Ensembl
MGI
PMID:20663892 GO_REF:0000107 MGI:4849624 NCBI chr 4:8,409,039...8,424,776
Ensembl chr 4:8,409,484...8,424,644
JBrowse link
G ATP8B1 ATPase phospholipid transporting 8B1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3041693|PMID:14976163) Ensembl
MGI
PMID:14976163 GO_REF:0000107 MGI:3041693 NCBI chr 1:18,156,664...18,279,131
Ensembl chr 1:18,156,410...18,277,904
JBrowse link
G BAAT bile acid-CoA:amino acid N-acyltransferase acts_upstream_of_or_within ISO (MGI:893269|PMID:9215542) MGI PMID:9215542 MGI:893269 NCBI chr11:58,102,057...58,116,750
Ensembl chr11:58,102,592...58,109,389
JBrowse link
G CYP19A1 cytochrome P450 family 19 subfamily A member 1 ISO chenodeoxycholic acid RGD PMID:20026603 RGD:4890374 NCBI chr30:16,954,020...17,056,728
Ensembl chr30:16,957,215...16,988,353
JBrowse link
G GBA2 glucosylceramidase beta 2 involved_in
NOT|involved_in
IEA
ISO
(MGI:3690511|PMID:17080196) Ensembl
UniProt
PMID:17080196 GO_REF:0000107 MGI:3690511 NCBI chr11:52,264,959...52,277,298
Ensembl chr11:52,265,070...52,277,213
JBrowse link
G LEP leptin acts_upstream_of_or_within ISO (MGI:2386518|PMID:12114517) MGI PMID:12114517 MGI:2386518 NCBI chr14:8,115,396...8,130,946
Ensembl chr14:8,116,122...8,131,395
JBrowse link
G LOC480777 UDP-glucuronosyltransferase 2A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:58,911,301...58,932,594
Ensembl chr13:59,138,348...59,222,802
JBrowse link
G NR1H4 nuclear receptor subfamily 1 group H member 4 acts_upstream_of_or_within ISO (MGI:2678884|PMID:12917447) RGD
MGI
PMID:12754200 PMID:12917447 PMID:27993716 MGI:2678884 RGD:14701034 RGD:1625079 NCBI chr15:39,497,313...39,608,120
Ensembl chr15:39,536,290...39,608,116
JBrowse link
G NR5A2 nuclear receptor subfamily 5 group A member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3050203|PMID:15014077) Ensembl
MGI
PMID:15014077 GO_REF:0000107 MGI:3050203 NCBI chr 7:2,925,915...3,062,118
Ensembl chr 7:2,927,326...3,062,348
JBrowse link
G SCP2 sterol carrier protein 2 involved_in ISO PMID:9325339 UniProt PMID:9325339 RGD:21201257 NCBI chr 5:55,860,053...55,971,657
Ensembl chr 5:55,860,549...55,964,014
JBrowse link
G SLC27A5 solute carrier family 27 member 5 acts_upstream_of_or_within ISO (MGI:3722950|PMID:16618417) RGD
MGI
PMID:12454267 PMID:16618417 MGI:3722950 RGD:1302363 NCBI chr 1:99,435,140...99,438,388 JBrowse link
biotin metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BTD biotinidase involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:4888153|PMID:21051254)
GO_Central
MGI
PMID:21051254 PMID:21873635 MGI:4888153 NCBI chr23:27,037,640...27,069,544
Ensembl chr23:27,037,921...27,069,456
JBrowse link
branched-chain amino acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAT1 branched chain amino acid transaminase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr27:22,536,297...22,643,350
Ensembl chr27:22,535,254...22,636,959
JBrowse link
G BCAT2 branched chain amino acid transaminase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:107,539,125...107,549,286
Ensembl chr 1:107,538,465...107,549,234
JBrowse link
branched-chain amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAT1 branched chain amino acid transaminase 1 acts_upstream_of_or_within ISO (MGI:3027291|PMID:14755340) MGI PMID:14755340 MGI:3027291 NCBI chr27:22,536,297...22,643,350
Ensembl chr27:22,535,254...22,636,959
JBrowse link
G BCAT2 branched chain amino acid transaminase 2 acts_upstream_of_or_within ISO (MGI:3027291|PMID:14755340) RGD
MGI
PMID:11733007 PMID:14755340 MGI:3027291 RGD:1582175 NCBI chr 1:107,539,125...107,549,286
Ensembl chr 1:107,538,465...107,549,234
JBrowse link
G BCKDHA branched chain keto acid dehydrogenase E1 subunit alpha involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 1:112,579,345...112,599,163 JBrowse link
G BCKDHB branched chain keto acid dehydrogenase E1 subunit beta involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:41,009,798...41,224,802
Ensembl chr12:41,009,730...41,224,802
JBrowse link
G BCKDK branched chain keto acid dehydrogenase kinase involved_in ISO PMID:1377677 HGNC-UCL PMID:1377677 RGD:68712 NCBI chr 6:17,128,615...17,132,925
Ensembl chr 6:17,128,824...17,133,585
JBrowse link
G BGLAP bone gamma-carboxyglutamate protein involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr 7:41,630,092...41,630,976
Ensembl chr 7:41,630,098...41,665,791
JBrowse link
G ECHDC1 ethylmalonyl-CoA decarboxylase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:66,012,245...66,073,008
Ensembl chr 1:66,012,782...66,073,000
JBrowse link
G HIBADH 3-hydroxyisobutyrate dehydrogenase involved_in IEA UniProt GO_REF:0000043 NCBI chr14:40,672,294...40,780,608
Ensembl chr14:40,673,008...40,780,516
JBrowse link
G HIBCH 3-hydroxyisobutyryl-CoA hydrolase involved_in IEA UniProt GO_REF:0000043 NCBI chr37:841,385...943,972
Ensembl chr37:841,414...943,941
JBrowse link
G IVD isovaleryl-CoA dehydrogenase involved_in ISO (PMID:7640268) UniProt PMID:7640268 NCBI chr30:7,584,122...7,594,599
Ensembl chr30:7,584,086...7,594,150
JBrowse link
G SLC25A44 solute carrier family 25 member 44 involved_in IEA InterPro
Ensembl
GO_REF:0000002 GO_REF:0000107 NCBI chr 7:41,630,868...41,665,894
Ensembl chr 7:41,630,098...41,665,791
JBrowse link
G TMEM91 transmembrane protein 91 involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 1:112,610,660...112,615,813 JBrowse link
branched-chain amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAT1 branched chain amino acid transaminase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr27:22,536,297...22,643,350
Ensembl chr27:22,535,254...22,636,959
JBrowse link
G BCAT2 branched chain amino acid transaminase 2 acts_upstream_of_or_within ISO (MGI:4442298|PMID:20237068) MGI PMID:20237068 MGI:4442298 NCBI chr 1:107,539,125...107,549,286
Ensembl chr 1:107,538,465...107,549,234
JBrowse link
brexanolone catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HSD17B6 hydroxysteroid 17-beta dehydrogenase 6 involved_in IEA Ensembl GO_REF:0000107 NCBI chr10:948,982...1,016,651
Ensembl chr10:1,000,199...1,016,420
JBrowse link
brexanolone metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HSD17B10 hydroxysteroid 17-beta dehydrogenase 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:45,165,272...45,167,683
Ensembl chr  X:45,165,272...45,167,574
JBrowse link
butyrate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACADS acyl-CoA dehydrogenase short chain involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:3968063 PMID:21873635 RGD:2317678 NCBI chr26:16,572,936...16,584,760
Ensembl chr26:16,572,947...16,584,194
JBrowse link
butyrate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOT4 acyl-CoA thioesterase 4 NOT|involved_in ISO (PMID:16940157) HGNC-UCL PMID:16940157 NCBI chr 8:46,889,326...46,894,379
Ensembl chr 8:46,852,880...46,911,640
JBrowse link
butyryl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT7 nudix hydrolase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:73,515,819...73,527,780
Ensembl chr 5:73,516,166...73,527,716
JBrowse link
calcitriol biosynthetic process from calciol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP27A1 cytochrome P450 family 27 subfamily A member 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr37:25,366,475...25,401,978
Ensembl chr37:25,366,472...25,401,509
JBrowse link
G CYP27B1 cytochrome P450 family 27 subfamily B member 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:1,825,224...1,830,845
Ensembl chr10:1,826,046...1,829,911
JBrowse link
G CYP2R1 cytochrome P450 family 2 subfamily R member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr21:37,553,883...37,579,744
Ensembl chr21:37,552,732...37,606,725
JBrowse link
cAMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADCY1 adenylate cyclase 1 involved_in IBA
ISO
IEA
(PMID:21873635) GO_Central
RGD
UniProt
PMID:14985420 PMID:21873635 GO_REF:0000043 RGD:2312640 NCBI chr16:1,064,644...1,166,864
Ensembl chr16:1,037,162...1,167,094
JBrowse link
G ADCY10 adenylate cyclase 10 involved_in IEA
ISO
Ensembl
RGD
PMID:7225326 PMID:9874775 PMID:16627466 PMID:16964251 GO_REF:0000107 RGD:1299450 RGD:2313171 RGD:2313173 RGD:2313177 NCBI chr 7:30,576,445...30,660,926
Ensembl chr 7:30,577,591...30,660,926
JBrowse link
G ADCY2 adenylate cyclase 2 involved_in IEA
ISO
UniProt
RGD
PMID:11738086 PMID:12711600 GO_REF:0000043 RGD:2312641 RGD:2312674 NCBI chr34:6,139,931...6,527,677
Ensembl chr34:6,140,276...6,527,677
JBrowse link
G ADCY3 adenylate cyclase 3 involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:12711600 PMID:21873635 RGD:2312674 NCBI chr17:19,153,732...19,231,943
Ensembl chr17:19,154,571...19,232,411
JBrowse link
G ADCY4 adenylate cyclase 4 involved_in IEA
ISO
UniProt
RGD
PMID:11738086 PMID:12711600 GO_REF:0000043 RGD:2312641 RGD:2312674 NCBI chr 8:4,288,708...4,304,092
Ensembl chr 8:4,288,714...4,304,589
JBrowse link
G ADCY5 adenylate cyclase 5 involved_in ISS
ISO
IBA
IEA
(PMID:21873635) UniProt
RGD
GO_Central
Ensembl
PMID:10894801 PMID:11738086 PMID:12711600 PMID:21873635 GO_REF:0000024 GO_REF:0000043 GO_REF:0000107 RGD:2312641 RGD:2312674 RGD:2315006 NCBI chr33:26,345,617...26,490,120
Ensembl chr33:26,345,617...26,504,616
JBrowse link
G ADCY6 adenylate cyclase 6 involved_in ISS
IEA
ISO
IBA
(PMID:21873635) UniProt
Ensembl
RGD
GO_Central
PMID:10866989 PMID:10894801 PMID:11738086 PMID:12711600 PMID:15579502 PMID:15961389 PMID:18971210 PMID:21873635 GO_REF:0000024 GO_REF:0000043 GO_REF:0000107 RGD:1598749 RGD:2312641 RGD:2312654 RGD:2312674 RGD:2312678 RGD:2313211 RGD:2315006 NCBI chr27:5,739,514...5,752,888
Ensembl chr27:5,733,586...5,752,888
JBrowse link
G ADCY7 adenylate cyclase 7 involved_in IEA
ISO
Ensembl
RGD
PMID:12711600 GO_REF:0000107 RGD:2312674 NCBI chr 2:65,003,891...65,034,812
Ensembl chr 2:65,006,038...65,034,777
JBrowse link
G ADCY8 adenylate cyclase 8 involved_in IBA
ISO
IEA
(PMID:21873635) GO_Central
RGD
UniProt
PMID:16741924 PMID:19305019 PMID:19444869 PMID:21873635 GO_REF:0000043 RGD:2312769 RGD:2312785 RGD:7241269 NCBI chr13:27,723,530...27,937,821
Ensembl chr13:27,723,530...27,937,734
JBrowse link
G ADCY9 adenylate cyclase 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:76465|PMID:7575502), (MGI:80863|PMID:8662814) Ensembl
MGI
RGD
PMID:7575502 PMID:8662814 PMID:19444869 GO_REF:0000107 MGI:76465 MGI:80863 RGD:2312785 NCBI chr 6:37,213,251...37,334,820
Ensembl chr 6:37,213,227...37,331,563
JBrowse link
G IGFBP1 insulin like growth factor binding protein 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
UniProt
PMID:21873635 GO_REF:0000043 NCBI chr16:1,037,169...1,040,996
Ensembl chr16:1,037,162...1,167,094
JBrowse link
cAMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDE4A phosphodiesterase 4A involved_in IEA UniProt GO_REF:0000041 NCBI chr20:50,672,012...50,723,318
Ensembl chr20:50,672,363...50,811,160
JBrowse link
G PDE4B phosphodiesterase 4B involved_in IEA UniProt GO_REF:0000041 NCBI chr 5:44,063,145...44,606,070
Ensembl chr 5:44,065,106...44,500,999
JBrowse link
G PDE4C phosphodiesterase 4C involved_in IEA UniProt GO_REF:0000041 NCBI chr20:44,767,187...44,792,887
Ensembl chr20:44,742,161...44,791,053
JBrowse link
G PDE4D phosphodiesterase 4D involved_in IEA
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000041 NCBI chr 2:45,843,767...47,245,263
Ensembl chr 2:45,846,294...46,949,912
JBrowse link
G PDE8A phosphodiesterase 8A involved_in IEA UniProt GO_REF:0000041 NCBI chr 3:54,278,498...54,367,492
Ensembl chr 3:54,128,680...54,367,400
JBrowse link
G SLC28A1 solute carrier family 28 member 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr 3:54,128,172...54,177,544
Ensembl chr 3:54,128,680...54,367,400
JBrowse link
cAMP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CACNB4 calcium voltage-gated channel auxiliary subunit beta 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:76872|PMID:7595494) Ensembl
MGI
PMID:7595494 GO_REF:0000107 MGI:76872 NCBI chr19:52,987,170...53,116,410
Ensembl chr19:52,993,618...53,116,140
JBrowse link
G EPHA2 EPH receptor A2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:81,534,130...81,561,722
Ensembl chr 2:81,534,125...81,561,725
JBrowse link
canonical glycolysis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENO1 enolase 1 involved_in ISO (PMID:3529090)
PMID:15041191
(PMID:29775581)
CAFA
UniProt
PMID:3529090 PMID:15041191 PMID:29775581 RGD:2302788 NCBI chr 5:62,300,805...62,314,508
Ensembl chr 5:62,300,808...62,304,093
JBrowse link
G ENO2 enolase 2 involved_in ISO PMID:15041191 CAFA PMID:15041191 RGD:2302788 NCBI chr27:38,120,404...38,128,543
Ensembl chr27:38,119,413...38,129,182
JBrowse link
G FOXK1 forkhead box K1 involved_in
acts_upstream_of
IEA
ISO
(PMID:30700909) Ensembl
UniProt
PMID:30700909 GO_REF:0000107 NCBI chr 6:12,863,093...12,931,877
Ensembl chr 6:12,869,940...12,930,954
JBrowse link
G FOXK2 forkhead box K2 acts_upstream_of ISO (MGI:6281052|PMID:30700909) UniProt PMID:30700909 MGI:6281052
G PFKL phosphofructokinase, liver type involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr31:38,153,638...38,178,741
Ensembl chr31:38,156,451...38,178,507
JBrowse link
G PFKM phosphofructokinase, muscle involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:4356361|PMID:19696889)
GO_Central
MGI
PMID:19696889 PMID:21873635 MGI:4356361 NCBI chr27:6,620,300...6,640,649
Ensembl chr27:6,620,300...6,663,670
JBrowse link
G PFKP phosphofructokinase, platelet involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:32,220,876...32,254,354
Ensembl chr 2:32,220,878...32,260,911
JBrowse link
carboxylic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PON1 paraoxonase 1 involved_in ISO (PMID:7638166) BHF-UCL PMID:7638166 NCBI chr14:20,565,620...20,600,774
Ensembl chr14:20,565,641...20,642,985
JBrowse link
G PON3 paraoxonase 3 involved_in ISO (PMID:15772423) BHF-UCL PMID:15772423 NCBI chr14:20,615,180...20,642,807
Ensembl chr14:20,565,641...20,642,985
JBrowse link
carboxylic acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSAD cysteine sulfinic acid decarboxylase involved_in IEA InterPro GO_REF:0000002 NCBI chr27:2,005,482...2,036,703
Ensembl chr27:2,005,355...2,036,228
JBrowse link
G GAD1 glutamate decarboxylase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr36:15,351,289...15,391,701
Ensembl chr36:15,349,683...15,391,824
JBrowse link
G GAD2 glutamate decarboxylase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:7,365,708...7,450,893
Ensembl chr 2:7,365,283...7,450,893
JBrowse link
G GADL1 glutamate decarboxylase like 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr23:13,697,028...13,859,980
Ensembl chr23:13,696,741...13,859,358
JBrowse link
G IL1RN interleukin 1 receptor antagonist ISO kainic acid RGD PMID:9685640 RGD:7174732 NCBI chr17:37,236,690...37,250,424
Ensembl chr17:37,212,751...37,249,329
JBrowse link
G LDHA lactate dehydrogenase A involved_in IEA InterPro GO_REF:0000002 NCBI chr21:40,829,844...40,840,947 JBrowse link
G LDHB lactate dehydrogenase B involved_in IEA InterPro GO_REF:0000002 NCBI chr27:25,470,666...25,493,114
Ensembl chr27:25,470,665...25,492,920
JBrowse link
G LDHC lactate dehydrogenase C involved_in IEA InterPro GO_REF:0000002 NCBI chr21:40,844,644...40,890,407
Ensembl chr21:40,844,662...40,890,398
JBrowse link
G LOC475101 L-lactate dehydrogenase B chain pseudogene involved_in IEA InterPro GO_REF:0000002 NCBI chr13:28,303,658...28,304,947 JBrowse link
G LOC477883 L-lactate dehydrogenase B chain pseudogene involved_in IEA InterPro GO_REF:0000002 NCBI chr29:7,016,566...7,017,824 JBrowse link
G LOC483960 glutamate decarboxylase 1-like involved_in IEA InterPro GO_REF:0000002 NCBI chr 1:15,982,071...16,004,623 JBrowse link
G MCFD2 multiple coagulation factor deficiency 2, ER cargo receptor complex subunit involved_in ISO PMID:12832409 MGI PMID:12832409 RGD:724668 NCBI chr10:49,091,466...49,101,769
Ensembl chr10:49,092,908...49,101,775
JBrowse link
G MDH2 malate dehydrogenase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:7,389,266...7,405,311 JBrowse link
G MIF macrophage migration inhibitory factor involved_in ISO (PMID:12782713) BHF-UCL PMID:12782713
G PDXDC1 pyridoxal dependent decarboxylase domain containing 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 6:28,412,211...28,464,522
Ensembl chr 6:28,412,316...28,508,743
JBrowse link
G UEVLD UEV and lactate/malate dehyrogenase domains involved_in IEA InterPro GO_REF:0000002 NCBI chr21:40,956,785...41,006,532
Ensembl chr21:40,959,002...41,006,571
JBrowse link
carnosine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CARNS1 carnosine synthase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4457482|PMID:20097752), (MGI:5607487|PMID:24891507) InterPro
Ensembl
MGI
PMID:20097752 PMID:24891507 GO_REF:0000002 GO_REF:0000107 MGI:4457482 MGI:5607487 NCBI chr18:50,041,545...50,050,438
Ensembl chr18:50,042,465...50,050,949
JBrowse link
carnosine metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CARNMT1 carnosine N-methyltransferase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:83,188,622...83,229,942
Ensembl chr 1:83,188,747...83,227,488
JBrowse link
CDP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CMPK1 cytidine/uridine monophosphate kinase 1 involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:3010881 PMID:21873635 RGD:5133253 NCBI chr15:13,324,235...13,357,387
Ensembl chr15:13,326,185...13,358,152
JBrowse link
CDP phosphorylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AK9 adenylate kinase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:66,381,215...66,508,559
Ensembl chr12:66,389,190...66,500,273
JBrowse link
cellular amino acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCAT1 branched chain amino acid transaminase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr27:22,536,297...22,643,350
Ensembl chr27:22,535,254...22,636,959
JBrowse link
G BCAT2 branched chain amino acid transaminase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr 1:107,539,125...107,549,286
Ensembl chr 1:107,538,465...107,549,234
JBrowse link
G PYCR1 pyrroline-5-carboxylate reductase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 9:360,353...364,795
Ensembl chr 9:360,376...364,570
JBrowse link
cellular amino acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENOSF1 enolase superfamily member 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 7:67,498,425...67,527,534
Ensembl chr 7:67,498,432...67,527,490
JBrowse link
G IL4I1 interleukin 4 induced 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:106,636,282...106,673,438
Ensembl chr 1:106,657,477...106,673,422
JBrowse link
cellular amino acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABHD14A abhydrolase domain containing 14A involved_in IEA InterPro GO_REF:0000002 NCBI chr20:37,738,500...37,744,689 JBrowse link
G ASL argininosuccinate lyase acts_upstream_of_or_within ISO (MGI:3604426|PMID:12559843) MGI PMID:12559843 MGI:3604426 NCBI chr 6:768,522...779,144
Ensembl chr 6:730,358...779,424
JBrowse link
G ASNS asparagine synthetase (glutamine-hydrolyzing) ISO RGD PMID:7818476 RGD:1298553 NCBI chr14:22,718,020...22,734,109
Ensembl chr14:22,718,042...22,734,054
JBrowse link
G DDC dopa decarboxylase involved_in IEA InterPro GO_REF:0000002 NCBI chr18:1,802,239...1,876,714
Ensembl chr18:1,803,273...1,867,616
JBrowse link
G DIO1 iodothyronine deiodinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:55,081,894...55,098,560
Ensembl chr 5:55,082,604...55,098,529
JBrowse link
G GGT1 gamma-glutamyltransferase 1 involved_in ISO (PMID:14754911) UniProt PMID:14754911 NCBI chr26:28,301,455...28,315,029 JBrowse link
G GGT5 gamma-glutamyltransferase 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr26:28,316,022...28,343,928
Ensembl chr26:28,317,989...28,343,611
JBrowse link
G GLUD1 glutamate dehydrogenase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 4:34,629,046...34,662,711 JBrowse link
G GOT1 glutamic-oxaloacetic transaminase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr28:12,352,658...12,377,960
Ensembl chr28:12,352,659...12,414,579
JBrowse link
G GOT1L1 glutamic-oxaloacetic transaminase 1 like 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr16:27,462,364...27,495,115
Ensembl chr16:27,462,501...27,467,492
JBrowse link
G GOT2 glutamic-oxaloacetic transaminase 2 involved_in IEA
ISO
InterPro
RGD
PMID:14522984 GO_REF:0000002 RGD:1582383 NCBI chr 2:57,968,833...57,994,219
Ensembl chr 2:57,968,833...57,994,218
JBrowse link
G HDC histidine decarboxylase involved_in IEA InterPro GO_REF:0000002 NCBI chr30:16,201,222...16,223,452
Ensembl chr30:16,201,589...16,223,662
JBrowse link
G HGD homogentisate 1,2-dioxygenase acts_upstream_of_or_within ISO (MGI:64581|PMID:8188247) MGI PMID:8188247 MGI:64581 NCBI chr33:24,066,099...24,107,827
Ensembl chr33:24,066,306...24,151,354
JBrowse link
G KYAT3 kynurenine aminotransferase 3 involved_in ISO (MGI:3835225|PMID:19029248) UniProt PMID:19029248 MGI:3835225 NCBI chr 6:59,409,715...59,473,238
Ensembl chr 6:59,416,191...59,473,232
JBrowse link
G LOC476602 aminoacylase-1 involved_in IEA InterPro GO_REF:0000002 NCBI chr20:37,732,231...37,736,986 JBrowse link
G LOC491550 probable low-specificity L-threonine aldolase 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:2,909,869...2,917,921 JBrowse link
G PM20D1 peptidase M20 domain containing 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr38:2,247,645...2,270,286
Ensembl chr38:2,250,272...2,270,653
JBrowse link
G SGSM2 small G protein signaling modulator 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 9:46,405,890...46,464,586
Ensembl chr 9:46,415,801...46,477,524
JBrowse link
G SLC16A2 solute carrier family 16 member 2 involved_in
acts_upstream_of
IEA
ISO
(PMID:26305885) Ensembl
ARUK-UCL
PMID:26305885 GO_REF:0000107 NCBI chr  X:57,845,865...57,859,827
Ensembl chr  X:57,845,488...57,857,518
JBrowse link
G SRR serine racemase involved_in IEA InterPro GO_REF:0000002
G TAT tyrosine aminotransferase ISO RGD PMID:12717026 RGD:1582407 NCBI chr 5:77,365,589...77,378,474
Ensembl chr 5:77,366,138...77,378,419
JBrowse link
cellular detoxification of methylglyoxal term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PARK7 Parkinsonism associated deglycase involved_in ISO (PMID:28993701) UniProt PMID:28993701 NCBI chr 5:61,576,219...61,592,325
Ensembl chr 5:61,576,069...61,592,303
JBrowse link
cellular glucuronidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC480777 UDP-glucuronosyltransferase 2A1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr13:58,911,301...58,932,594
Ensembl chr13:59,138,348...59,222,802
JBrowse link
G UGT1A6 UDP glucuronosyltransferase 1 family, polypeptide A6 involved_in ISO (PMID:22579593) UniProt PMID:22579593 NCBI chr25:45,081,655...45,161,584
Ensembl chr25:45,032,130...45,160,941
JBrowse link
G UGT2A3 UDP glucuronosyltransferase family 2 member A3 involved_in ISO (PMID:19858781) BHF-UCL PMID:19858781 NCBI chr13:59,036,107...59,057,684 JBrowse link
cellular ketone body metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G OXCT1 3-oxoacid CoA-transferase 1 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:2664113|PMID:12534938)
GO_Central
MGI
RGD
PMID:3860190 PMID:12534938 PMID:21873635 MGI:2664113 RGD:2326212 NCBI chr 4:67,709,846...67,841,737
Ensembl chr 4:67,527,531...67,841,518
JBrowse link
cellular ketone metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP2B6 cytochrome P450 2B11 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:112,817,561...112,833,294
Ensembl chr 1:112,816,502...112,833,293
JBrowse link
G DHRS4 dehydrogenase/reductase 4 involved_in ISO (PMID:18571493) UniProt PMID:18571493 NCBI chr 8:4,046,532...4,058,498
Ensembl chr 8:4,046,544...4,084,744
JBrowse link
G NMT1 N-myristoyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:18,422,103...18,462,612
Ensembl chr 9:18,425,268...18,459,196
JBrowse link
cGMP biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GUCY1A1 guanylate cyclase 1 soluble subunit alpha 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3640061|PMID:16614755) Ensembl
MGI
UniProt
PMID:16614755 GO_REF:0000043 GO_REF:0000107 MGI:3640061 NCBI chr15:53,172,914...53,236,200
Ensembl chr15:53,174,157...53,234,533
JBrowse link
G GUCY1A2 guanylate cyclase 1 soluble subunit alpha 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 5:25,291,019...25,718,918
Ensembl chr 5:25,291,583...25,686,947
JBrowse link
G GUCY1B1 guanylate cyclase 1 soluble subunit beta 1 involved_in IEA
ISS
InterPro
Ensembl
UniProt
GO_REF:0000002 GO_REF:0000024 GO_REF:0000107 NCBI chr15:53,266,243...53,312,109
Ensembl chr15:53,265,350...53,312,111
JBrowse link
G GUCY2C guanylate cyclase 2C involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr27:31,915,552...31,989,748
Ensembl chr27:31,917,604...31,989,551
JBrowse link
G GUCY2D guanylate cyclase 2D, retinal involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:32,844,033...32,859,263
Ensembl chr 5:32,844,033...32,857,687
JBrowse link
G GUCY2F guanylate cyclase 2F, retinal involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:82,648,673...82,751,394
Ensembl chr  X:82,649,601...82,751,394
JBrowse link
G NPPA natriuretic peptide A involved_in
acts_upstream_of
IBA
ISS
(PMID:21873635) GO_Central PMID:21873635 GO_REF:0000024 NCBI chr 2:84,406,317...84,408,115
Ensembl chr 2:84,396,073...84,408,385
JBrowse link
G NPPB natriuretic peptide B acts_upstream_of
involved_in
ISS
IBA
(PMID:21873635) GO_Central PMID:21873635 GO_REF:0000024 NCBI chr 2:84,395,844...84,397,473 JBrowse link
G NPPC natriuretic peptide C involved_in
acts_upstream_of
IBA
ISO
(PMID:21873635)
(MGI:2177134|PMID:11259675)
(PMID:1672777)
GO_Central
GO_Central
PMID:1672777 PMID:11259675 PMID:21873635 MGI:2177134 NCBI chr25:43,714,545...43,718,969
Ensembl chr25:43,717,939...43,718,996
JBrowse link
G NPR1 natriuretic peptide receptor 1 involved_in IEA
IBA
(PMID:21873635) UniProt
GO_Central
PMID:21873635 GO_REF:0000043 NCBI chr 7:43,382,246...43,396,464
Ensembl chr 7:43,283,418...43,396,027
JBrowse link
G NPR2 natriuretic peptide receptor 2 involved_in
acts_upstream_of
IBA
ISO
IEA
(PMID:21873635)
(PMID:1672777)
GO_Central
GO_Central
Ensembl
UniProt
PMID:1672777 PMID:21873635 GO_REF:0000043 GO_REF:0000107 NCBI chr11:52,283,680...52,339,247
Ensembl chr11:52,321,590...52,339,249
JBrowse link
cGMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDE1A phosphodiesterase 1A ISO RGD PMID:16514069 RGD:2312521 NCBI chr36:25,250,398...25,591,775
Ensembl chr36:25,256,314...25,578,768
JBrowse link
G PDE2A phosphodiesterase 2A involved_in IBA
IEA
ISS
(PMID:21873635) GO_Central
Ensembl
UniProt
PMID:21873635 GO_REF:0000024 GO_REF:0000107 NCBI chr21:25,542,030...25,635,661
Ensembl chr21:25,542,268...25,635,660
JBrowse link
G PDE5A phosphodiesterase 5A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2450821|PMID:12554648) UniProt
MGI
PMID:12554648 GO_REF:0000041 MGI:2450821 NCBI chr32:38,272,573...38,407,517
Ensembl chr32:38,244,338...38,407,522
JBrowse link
G PDE9A phosphodiesterase 9A involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr31:36,949,777...37,036,237
Ensembl chr31:36,949,723...37,035,809
JBrowse link
cGMP metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATP2B2 ATPase plasma membrane Ca2+ transporting 2 acts_upstream_of_or_within ISO (MGI:66348|PMID:7518067), (MGI:68066|PMID:3038581) MGI PMID:3038581 PMID:7518067 MGI:66348 MGI:68066 NCBI chr20:7,665,468...8,037,407
Ensembl chr20:7,749,807...8,034,474
JBrowse link
G PDE5A phosphodiesterase 5A acts_upstream_of_or_within ISO (MGI:4361111|PMID:19474061), (MGI:4834094|PMID:20511540) MGI PMID:19474061 PMID:20511540 MGI:4361111 MGI:4834094 NCBI chr32:38,272,573...38,407,517
Ensembl chr32:38,244,338...38,407,522
JBrowse link
G PDE9A phosphodiesterase 9A involved_in ISO (PMID:9624146) UniProt PMID:9624146 NCBI chr31:36,949,777...37,036,237
Ensembl chr31:36,949,723...37,035,809
JBrowse link
G RORA RAR related orphan receptor A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:66348|PMID:7518067) Ensembl
MGI
PMID:7518067 GO_REF:0000107 MGI:66348 NCBI chr30:25,315,974...26,026,708
Ensembl chr30:25,325,275...26,026,623
JBrowse link
cholesterol biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOA1 apolipoprotein A1 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:2180727|PMID:8647961)
GO_Central
MGI
PMID:8647961 PMID:21873635 MGI:2180727 NCBI chr 5:16,740,071...16,742,081
Ensembl chr 5:16,740,130...16,741,943
JBrowse link
G APOA4 apolipoprotein A4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:16,751,588...16,754,215
Ensembl chr 5:16,751,799...16,754,837
JBrowse link
G APOA5 apolipoprotein A5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:16,774,117...16,777,535
Ensembl chr 5:16,774,501...16,777,768
JBrowse link
G CES1 carboxylesterase 1 involved_in ISO (PMID:11015575) BHF-UCL PMID:11015575 NCBI chr 2:60,276,723...60,305,970
Ensembl chr 2:60,236,150...60,321,178
JBrowse link
G CFTR CF transmembrane conductance regulator involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3709533|PMID:17085523) Ensembl
MGI
PMID:17085523 GO_REF:0000107 MGI:3709533 NCBI chr14:56,290,417...56,452,919
Ensembl chr14:56,290,275...56,453,977
JBrowse link
G CYB5R3 cytochrome b5 reductase 3 involved_in IEA UniProt GO_REF:0000043 NCBI chr10:22,829,898...22,848,284
Ensembl chr10:22,819,221...22,848,284
JBrowse link
G DHCR24 24-dehydrocholesterol reductase acts_upstream_of_or_within ISO (MGI:2686848|PMID:14684813), (MGI:3624168|PMID:16321981), (MGI:3769949|PMID:16513830) MGI PMID:14684813 PMID:16321981 PMID:16513830 MGI:2686848 MGI:3624168 MGI:3769949 NCBI chr 5:54,294,055...54,324,389
Ensembl chr 5:54,294,046...54,321,921
JBrowse link
G DHCR7 7-dehydrocholesterol reductase involved_in IEA
ISO
IBA
(PMID:21873635) UniProt
RGD
GO_Central
PMID:9831636 PMID:10329655 PMID:21873635 GO_REF:0000041 RGD:2316918 RGD:632010 NCBI chr18:47,257,750...47,277,436
Ensembl chr18:47,261,730...47,274,236
JBrowse link
G EBP EBP cholestenol delta-isomerase involved_in ISO (PMID:9894009) RGD
UniProt
PMID:9894009 PMID:11171067 RGD:628445 NCBI chr  X:41,774,857...41,779,474
Ensembl chr  X:41,762,692...41,779,476
JBrowse link
G FDFT1 farnesyl-diphosphate farnesyltransferase 1 involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:16440058 PMID:21873635 RGD:1626611 NCBI chr25:26,060,031...26,093,515
Ensembl chr25:26,060,386...26,093,582
JBrowse link
G G6PD glucose-6-phosphate dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:122,217,317...122,231,862
Ensembl chr  X:122,205,683...122,231,678
JBrowse link
G HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2180727|PMID:8647961), (MGI:3603484|PMID:15845870), (MGI:70238|PMID:7798939) Ensembl
MGI
RGD
UniProt
PMID:7798939 PMID:8647961 PMID:12841361 PMID:15845870 GO_REF:0000043 GO_REF:0000107 MGI:2180727 MGI:3603484 MGI:70238 RGD:1300058 NCBI chr 3:30,970,037...30,988,987
Ensembl chr 3:30,970,037...30,990,294
JBrowse link
G HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:66,633,706...66,654,005
Ensembl chr 4:66,633,572...66,652,196
JBrowse link
G HMGCS2 3-hydroxy-3-methylglutaryl-CoA synthase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chr17:56,679,942...56,698,521
Ensembl chr17:56,680,301...56,698,419
JBrowse link
G HSD17B7 hydroxysteroid 17-beta dehydrogenase 7 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
(PMID:21873635)
(MGI:2673751|PMID:12829805)
GO_Central
MGI
Ensembl
PMID:12829805 PMID:21873635 GO_REF:0000107 MGI:2673751 NCBI chr38:19,975,935...19,999,077
Ensembl chr38:19,977,086...19,999,010
JBrowse link
G INSIG1 insulin induced gene 1 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3689278|PMID:16955138)
GO_Central
MGI
PMID:16955138 PMID:21873635 MGI:3689278 NCBI chr16:18,260,456...18,271,855
Ensembl chr16:18,259,935...18,271,378
JBrowse link
G INSIG2 insulin induced gene 2 involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(MGI:3689278|PMID:16955138)
GO_Central
Ensembl
MGI
PMID:16955138 PMID:21873635 GO_REF:0000107 MGI:3689278 NCBI chr19:31,796,984...31,811,556
Ensembl chr19:31,791,710...31,811,386
JBrowse link
G LBR lamin B receptor involved_in IEA UniProt GO_REF:0000041 NCBI chr 7:39,289,517...39,309,026
Ensembl chr 7:39,288,147...39,307,606
JBrowse link
G LSS lanosterol synthase involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:1429550 PMID:16440058 PMID:21873635 RGD:1626611 RGD:2316919 NCBI chr31:39,479,255...39,502,439
Ensembl chr31:39,480,581...39,503,042
JBrowse link
G MVD mevalonate diphosphate decarboxylase involved_in IEA UniProt GO_REF:0000041 NCBI chr 5:64,683,146...64,691,576
Ensembl chr 5:64,682,276...64,691,073
JBrowse link
G MVK mevalonate kinase involved_in IEA
IBA
(PMID:21873635) Ensembl
UniProt
GO_Central
PMID:21873635 GO_REF:0000043 GO_REF:0000107 NCBI chr26:17,497,516...17,519,015
Ensembl chr26:17,497,513...17,519,385
JBrowse link
G NPC1L1 NPC1 like intracellular cholesterol transporter 1 involved_in ISO (PMID:17140581) HGNC-UCL PMID:17140581
G PMVK phosphomevalonate kinase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:42,532,968...42,563,618
Ensembl chr 7:42,533,217...42,540,625
JBrowse link
G TM7SF2 transmembrane 7 superfamily member 2 involved_in IEA UniProt GO_REF:0000041 NCBI chr18:52,079,367...52,083,762
Ensembl chr18:52,079,425...52,085,390
JBrowse link
cholesterol biosynthetic process via 24,25-dihydrolanosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP51A1 cytochrome P450 family 51 subfamily A member 1 ISO RGD PMID:7581240 RGD:2316902 NCBI chr14:17,746,654...17,767,019
Ensembl chr14:17,746,656...17,766,658
JBrowse link
cholesterol biosynthetic process via desmosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHCR24 24-dehydrocholesterol reductase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:54,294,055...54,324,389
Ensembl chr 5:54,294,046...54,321,921
JBrowse link
cholesterol biosynthetic process via lathosterol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SC5D sterol-C5-desaturase involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:7961720 PMID:21873635 RGD:2316911 NCBI chr 5:12,760,591...12,774,484
Ensembl chr 5:12,763,286...12,775,393
JBrowse link
cholesterol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKR1D1 aldo-keto reductase family 1 member D1 involved_in ISO (PMID:7508385) UniProt PMID:7508385 NCBI chr16:1,499,251...1,583,965 JBrowse link
G APOE apolipoprotein E involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(MGI:1314982|PMID:9826706)
(PMID:21873635)
Ensembl
MGI
GO_Central
PMID:9826706 PMID:21873635 GO_REF:0000107 MGI:1314982 NCBI chr 1:110,525,717...110,528,534
Ensembl chr 1:110,525,722...110,528,440
JBrowse link
G CEL carboxyl ester lipase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:51,337,205...51,345,284
Ensembl chr 9:51,337,187...51,362,422
JBrowse link
G CYP27A1 cytochrome P450 family 27 subfamily A member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:25,366,475...25,401,978
Ensembl chr37:25,366,472...25,401,509
JBrowse link
G CYP39A1 cytochrome P450 family 39 subfamily A member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1859119|PMID:10748047) Ensembl
MGI
PMID:10748047 GO_REF:0000107 MGI:1859119 NCBI chr12:14,728,289...14,818,264
Ensembl chr12:14,729,063...14,867,888
JBrowse link
G CYP46A1 cytochrome P450 family 46 subfamily A member 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:68,064,898...68,095,537
Ensembl chr 8:68,041,344...68,095,212
JBrowse link
G CYP7A1 cytochrome P450 family 7 subfamily A member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1933035|PMID:11279518), (MGI:3603484|PMID:15845870) Ensembl
MGI
InterPro
PMID:11279518 PMID:15845870 GO_REF:0000002 GO_REF:0000107 MGI:1933035 MGI:3603484 NCBI chr29:9,285,315...9,295,895
Ensembl chr29:9,286,181...9,332,310
JBrowse link
G GTF3C5 general transcription factor IIIC subunit 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:51,347,273...51,362,621
Ensembl chr 9:51,337,187...51,362,422
JBrowse link
G HSD3B7 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 ISO RGD PMID:16081591 RGD:1599972 NCBI chr 6:17,220,006...17,223,985
Ensembl chr 6:17,219,574...17,223,114
JBrowse link
G MT3 metallothionein 3 involved_in IEA Ensembl GO_REF:0000107 Ensembl chr 2:59,624,849...59,626,424 JBrowse link
G SCARB1 scavenger receptor class B member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1934548|PMID:11278646)
(MGI:3690692|PMID:10559220)
Ensembl
MGI
PMID:10559220 PMID:11278646 GO_REF:0000107 MGI:1934548 MGI:3690692 NCBI chr26:5,035,797...5,122,383
Ensembl chr26:5,049,407...5,121,468
JBrowse link
cholesterol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCA1 ATP binding cassette subfamily A member 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2153573|PMID:11559713) Ensembl
MGI
PMID:11559713 GO_REF:0000107 MGI:2153573 NCBI chr11:60,761,669...60,869,753
Ensembl chr11:60,761,655...60,890,496
JBrowse link
G ABCA5 ATP binding cassette subfamily A member 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:15,708,070...15,781,100
Ensembl chr 9:15,420,835...15,783,045
JBrowse link
G ABCG1 ATP binding cassette subfamily G member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:36,574,406...36,627,598
Ensembl chr31:36,553,380...36,620,043
JBrowse link
G ANGPTL3 angiopoietin like 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:47,524,390...47,532,931
Ensembl chr 5:47,525,365...47,532,899
JBrowse link
G APLP2 amyloid beta precursor like protein 2 acts_upstream_of_or_within ISO (MGI:3762423|PMID:17920016) MGI PMID:17920016 MGI:3762423 NCBI chr 5:4,704,155...4,786,011
Ensembl chr 5:4,705,491...4,786,079
JBrowse link
G APOA1 apolipoprotein A1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3588626|PMID:15995171)
(MGI:1099137|PMID:9327769), (MGI:1339278|PMID:10357841), (MGI:3487338|PMID:15466405), (MGI:3688492|PMID:9795222), (MGI:3696597|PMID:17071966), (MGI:70854|PMID:7751823)
UniProt
MGI
PMID:7751823 PMID:9327769 PMID:9795222 PMID:10357841 PMID:15466405