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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular carbohydrate catabolic process
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Accession:GO:0044275 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells.
Synonyms:exact_synonym: cellular carbohydrate breakdown;   cellular carbohydrate catabolism;   cellular carbohydrate degradation


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cellular carbohydrate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enosf1 enolase superfamily member 1 involved_in ISO (PMID:24697329) RGD PMID:24697329
cellular oligosaccharide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gba3 glucosylceramidase beta 3 involved_in ISO (PMID:26193330) RGD PMID:26193330 NCBI chr14:64,390,793...64,535,213
Ensembl chr14:64,390,793...64,535,170
JBrowse link
G Neu2 neuraminidase 2 involved_in ISO
IEA
(PMID:26193330)
GO_REF:0000107
RGD
Ensembl
PMID:26193330 GO_REF:0000107 NCBI chr 9:94,702,095...94,724,903
Ensembl chr 9:94,702,129...94,724,902
JBrowse link
D-gluconate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Idnk Idnk, gluconokinase involved_in IBA
IEA
PMID:21873635
GO_REF:0000041
UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr17:6,885,323...6,892,603
Ensembl chr17:6,885,221...6,892,497
JBrowse link
G Pgd phosphogluconate dehydrogenase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:165,966,128...165,982,327 JBrowse link
glucuronoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd10 abhydrolase domain containing 10, depalmitoylase involved_in ISO (PMID:22294686) RGD PMID:22294686 NCBI chr11:60,053,719...60,068,142
Ensembl chr11:60,054,408...60,066,739
Ensembl chr11:60,054,408...60,066,739
JBrowse link
G Gusb glucuronidase, beta involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:4414887|PMID:19751987)
RGD PMID:19751987, PMID:21873635 MGI:4414887, RGD:13792537 NCBI chr12:30,202,066...30,215,583
Ensembl chr12:30,198,822...30,227,771
JBrowse link
glycerol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AC094212.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 8:26,341,732...26,345,754 JBrowse link
G Gk glycerol kinase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr  X:54,227,291...54,303,897
Ensembl chr  X:54,227,397...54,303,864
JBrowse link
G Gk2 glycerol kinase 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr14:13,751,284...13,753,136
Ensembl chr14:13,751,231...13,753,160
JBrowse link
G Gk5 glycerol kinase 5 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 8:103,929,093...104,001,916
Ensembl chr 8:103,938,520...104,000,250
JBrowse link
G Gpd2 glycerol-3-phosphate dehydrogenase 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 3:43,223,892...43,359,069
Ensembl chr 3:43,255,567...43,359,074
JBrowse link
G Gykl1 glycerol kinase-like 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr18:47,659,128...47,660,777
Ensembl chr18:47,659,128...47,660,777
JBrowse link
G Tkfc triokinase and FMN cyclase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:226,642,901...226,657,698
Ensembl chr 1:226,644,200...226,657,408
JBrowse link
G Tpi1 triosephosphate isomerase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:157,328,375...157,331,905
Ensembl chr 4:157,328,379...157,331,905
Ensembl chr 9:157,328,379...157,331,905
JBrowse link
glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb1 adrenoceptor beta 1 IDA RGD PMID:17911346 RGD:5129142 NCBI chr 1:277,537,585...277,538,985
Ensembl chr 1:277,537,585...277,538,985
JBrowse link
G Agl amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase involved_in IMP
IBA
IDA
PMID:21873635 RGD
GO_Central
PMID:9281456, PMID:21873635, PMID:6449198, PMID:11766064, PMID:15180797 RGD:1598779, RGD:13792537, RGD:1642743, RGD:2304191, RGD:1642741 NCBI chr 2:219,788,234...219,843,189
Ensembl chr 2:219,788,234...219,842,986
JBrowse link
G G6pc1 glucose-6-phosphatase catalytic subunit 1 acts_upstream_of_or_within ISO MGI:2387343 (MGI:1351534|PMID:10625614) RGD PMID:10625614 MGI:1351534 NCBI chr10:89,286,009...89,296,213
Ensembl chr10:89,285,855...89,296,213
JBrowse link
G Gaa alpha glucosidase acts_upstream_of_or_within
involved_in
IMP
ISO
IEA
IBA
IDA
MGI:2148550|MGI:2179955|MGI:2179960|MGI:2179961 (MGI:2136118|PMID:11328962), (MGI:2157196|PMID:11785984), (MGI:2179452|PMID:10838256)
GO_REF:0000107
(PMID:29061980), (PMID:9505277)
PMID:21873635
RGD
Ensembl
PMID:9505277 PMID:10838256 PMID:11328962 PMID:11785984 PMID:29061980, PMID:2193931, PMID:21873635, PMID:8710802 GO_REF:0000107 MGI:2136118 MGI:2157196 MGI:2179452, RGD:1599504, RGD:13792537, RGD:1599506 NCBI chr10:108,395,873...108,412,999
Ensembl chr10:108,395,860...108,413,059
JBrowse link
G Pfkm phosphofructokinase, muscle involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:4356541 (MGI:4356361|PMID:19696889)
Ensembl
RGD
PMID:19696889 GO_REF:0000107 MGI:4356361 NCBI chr 7:139,702,066...139,722,132
Ensembl chr 7:139,685,573...139,722,132
JBrowse link
G Pygb glycogen phosphorylase B involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:16226229, PMID:21873635, PMID:11071367, PMID:10634496 RGD:1642804, RGD:13792537, RGD:2304126, RGD:1642809 NCBI chr 3:146,581,063...146,629,504
Ensembl chr 3:146,582,752...146,634,535
JBrowse link
G Pygl glycogen phosphorylase L involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:15152027, PMID:21873635, PMID:6449198, PMID:114169 RGD:1642805, RGD:13792537, RGD:1642743, RGD:2304128 NCBI chr 6:92,597,759...92,643,734
Ensembl chr 6:92,597,706...92,643,847
JBrowse link
G Pygm glycogen phosphorylase, muscle associated acts_upstream_of_or_within
involved_in
IDA
ISO
IEA
IBA
(MGI:3052259|PMID:15282316), (MGI:4844074|PMID:17689562)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:15282316 PMID:17689562, PMID:14674711, PMID:21873635, PMID:6449198, PMID:11692172, PMID:11071367, PMID:10572943 GO_REF:0000107 MGI:3052259 MGI:4844074, RGD:1599986, RGD:13792537, RGD:1642743, RGD:1599897, RGD:2304126, RGD:1642811 NCBI chr 1:221,756,325...221,771,142
Ensembl chr 1:221,756,286...221,771,143
JBrowse link
G Stbd1 starch binding domain 1 involved_in ISO
ISS
(PMID:20810658)
GO_REF:0000024
RGD
GO_Central
PMID:20810658 GO_REF:0000024 NCBI chr14:16,976,355...16,979,760
Ensembl chr14:16,976,356...16,979,760
JBrowse link
glycophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rb1cc1 RB1-inducible coiled-coil 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:13,033,918...13,097,369
Ensembl chr 5:13,033,918...13,097,341
JBrowse link
G Stbd1 starch binding domain 1 involved_in ISO
ISS
(PMID:20810658)
GO_REF:0000024
RGD
GO_Central
PMID:20810658 GO_REF:0000024 NCBI chr14:16,976,355...16,979,760
Ensembl chr14:16,976,356...16,979,760
JBrowse link
inositol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Miox myo-inositol oxygenase involved_in IEA
IBA
ISS
ISO
GO_REF:0000104
PMID:21873635
GO_REF:0000024
(PMID:11716759)
(PMID:18364358)
UniProt
RGD
PMID:11716759 PMID:18364358, PMID:21873635 GO_REF:0000024 GO_REF:0000104, RGD:13792537 NCBI chr 7:130,308,707...130,311,205
Ensembl chr 7:130,308,532...130,313,727
JBrowse link
L-xylitol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sord sorbitol dehydrogenase involved_in ISO (PMID:8487505) RGD PMID:8487505 NCBI chr 3:114,176,127...114,207,368
Ensembl chr 3:114,176,309...114,207,366
JBrowse link
lipopolysaccharide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aoah acyloxyacyl hydrolase involved_in ISO
IBA
(PMID:1883828), (PMID:29343645)
PMID:21873635
RGD PMID:1883828 PMID:29343645, PMID:21873635 RGD:13792537 NCBI chr17:45,872,414...46,115,026
Ensembl chr17:45,872,414...46,115,004
JBrowse link
negative regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1b adrenoceptor alpha 1B acts_upstream_of_or_within ISO MGI:2148638 (MGI:3027459|PMID:14581480) RGD PMID:14581480 MGI:3027459 NCBI chr10:29,392,762...29,450,644
Ensembl chr10:29,392,762...29,450,644
JBrowse link
G Ins2 insulin 2 involved_in ISO (PMID:381941) RGD PMID:381941 NCBI chr 1:215,856,967...215,858,034
Ensembl chr 1:215,856,971...215,858,034
JBrowse link
negative regulation of pentose-phosphate shunt term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tp53 tumor protein p53 involved_in ISO (PMID:21336310) RGD PMID:21336310 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
positive regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra1b adrenoceptor alpha 1B acts_upstream_of_or_within ISO MGI:2148638 (MGI:3027459|PMID:14581480) RGD PMID:14581480 MGI:3027459 NCBI chr10:29,392,762...29,450,644
Ensembl chr10:29,392,762...29,450,644
JBrowse link
G Avpr1a arginine vasopressin receptor 1A involved_in NAS PMID:1560825 UniProt PMID:1560825 RGD:1298691 NCBI chr 7:67,341,366...67,345,290
Ensembl chr 7:67,341,080...67,345,308
JBrowse link
G Hmgb1 high mobility group box 1 acts_upstream_of_or_within ISO MGI:3530901 (MGI:1339514|PMID:10391216) RGD PMID:10391216 MGI:1339514 NCBI chr12:7,082,529...7,090,246
Ensembl chr16:37,500,017...37,502,237
JBrowse link
regulation of cellular carbohydrate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scarb2 scavenger receptor class B, member 2 involved_in ISO (PMID:18022370)
(MGI:3773765|PMID:18022370)
RGD PMID:18022370 MGI:3773765 NCBI chr14:17,064,173...17,115,620
Ensembl chr14:17,064,353...17,115,963
JBrowse link
regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ppp1ca protein phosphatase 1 catalytic subunit alpha IDA RGD PMID:7720853 RGD:2304267 NCBI chr 1:219,439,953...219,443,570
Ensembl chr 1:219,439,953...219,443,570
JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta IDA RGD PMID:7720853 RGD:2304267 NCBI chr 6:23,548,507...23,581,136
Ensembl chr 6:23,549,317...23,581,052
JBrowse link
G Ppp1r3b protein phosphatase 1, regulatory subunit 3B acts_upstream_of_or_within IDA
ISO
(PMID:22225877) RGD PMID:22225877, PMID:7720853, PMID:11716774 RGD:2304267, RGD:2306167 NCBI chr16:60,415,192...60,427,498
Ensembl chr16:60,415,229...60,427,474
JBrowse link
G Ppp1r3c protein phosphatase 1, regulatory subunit 3C IDA RGD PMID:11716774 RGD:2306167 NCBI chr 1:255,371,830...255,376,833
Ensembl chr 1:255,371,810...255,376,833
JBrowse link
G Ppp1r3d protein phosphatase 1, regulatory subunit 3D IDA RGD PMID:11716774 RGD:2306167 NCBI chr 3:173,950,613...173,953,684
Ensembl chr 3:173,950,613...173,953,684
JBrowse link
G Ppp1r3e protein phosphatase 1, regulatory subunit 3E IDA RGD PMID:15752363 RGD:2306166 NCBI chr15:33,535,986...33,537,146
Ensembl chr15:33,535,986...33,537,146
JBrowse link
regulation of pentose-phosphate shunt term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hsd11b1 hydroxysteroid 11-beta dehydrogenase 1 IDA RGD PMID:16234247 RGD:1625062 NCBI chr13:111,946,626...111,996,536
Ensembl chr13:111,926,442...111,972,603
JBrowse link
G Pgam1 phosphoglycerate mutase 1 involved_in ISO (PMID:12189148) RGD PMID:12189148 NCBI chr 1:261,158,204...261,165,814
Ensembl chr 1:261,158,261...261,165,808
JBrowse link
G Tigar TP53 induced glycolysis regulatory phosphatase involved_in IBA
ISO
PMID:21873635
(PMID:25928429)
RGD PMID:25928429, PMID:21873635 RGD:13792537 NCBI chr 4:159,635,145...159,654,108
Ensembl chr 4:159,635,153...159,654,063
JBrowse link
sorbitol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sord sorbitol dehydrogenase involved_in ISO
IBA
(PMID:12962626), (PMID:32367058), (PMID:3365415), (PMID:6870831), (PMID:8487505)
PMID:21873635
RGD PMID:3365415 PMID:6870831 PMID:8487505 PMID:12962626 PMID:32367058, PMID:21873635 RGD:13792537 NCBI chr 3:114,176,127...114,207,368
Ensembl chr 3:114,176,309...114,207,366
JBrowse link
trehalose catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Treh trehalase involved_in ISO (PMID:9427547) RGD PMID:9427547 NCBI chr 8:48,983,802...48,998,072
Ensembl chr 8:48,983,802...48,997,191
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19612
    metabolic process 11882
      cellular metabolic process 10839
        cellular catabolic process 2170
          cellular carbohydrate catabolic process 44
            Entner-Doudoroff pathway + 0
            alditol catabolic process + 9
            aldonic acid catabolic process + 2
            cellular oligosaccharide catabolic process 2
            cellular polysaccharide catabolic process + 21
            disaccharide catabolic process + 1
            glucuronoside catabolic process 2
            inositol catabolic process 1
            regulation of cellular carbohydrate catabolic process + 15
Path 2
Term Annotations click to browse term
  biological_process 19612
    metabolic process 11882
      organic substance metabolic process 11417
        organic substance catabolic process 2090
          carbohydrate catabolic process 185
            cellular carbohydrate catabolic process 44
              Entner-Doudoroff pathway + 0
              alditol catabolic process + 9
              aldonic acid catabolic process + 2
              cellular oligosaccharide catabolic process 2
              cellular polysaccharide catabolic process + 21
              disaccharide catabolic process + 1
              glucuronoside catabolic process 2
              inositol catabolic process 1
              regulation of cellular carbohydrate catabolic process + 15
paths to the root