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ONTOLOGY REPORT - ANNOTATIONS

Term:sulfur compound biosynthetic process
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Accession:GO:0044272 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of compounds that contain sulfur, such as the amino acids methionine and cysteine or the tripeptide glutathione.
Synonyms:exact_synonym: sulfur compound anabolism;   sulfur compound biosynthesis;   sulfur compound formation;   sulfur compound synthesis
 narrow_synonym: sulfur biosynthesis;   sulfur biosynthetic process


show annotations for term's descendants           Sort by:
'de novo' L-methionine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhmt betaine-homocysteine S-methyltransferase involved_in IEA
ISO		 GO_REF:0000107
(PMID:10529246)		 Ensembl
RGD		 PMID:10529246 GO_REF:0000107 NCBI chr 2:24,859,871...24,879,449
Ensembl chr 2:24,859,873...24,879,742 		JBrowse link
3'-phosphoadenosine 5'-phosphosulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Papss1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (MGI:2448448|PMID:12414806)
(PMID:14747722), (PMID:23207770)
PMID:21873635
(MGI:1202528|PMID:9545271), (MGI:77543|PMID:7493984)		 RGD PMID:7493984 PMID:9545271 PMID:12414806 PMID:14747722 PMID:23207770 More... MGI:1202528 MGI:2448448 MGI:77543, RGD:13792537 NCBI chr 2:220,040,338...220,114,399
Ensembl chr 2:220,040,312...220,114,395 		JBrowse link
G Papss2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 involved_in ISO
IBA		 MGI:1856688 (MGI:1277343|PMID:9671738), (MGI:1347713|PMID:10559207)
(PMID:23824674)
PMID:21873635		 RGD PMID:9671738 PMID:10559207 PMID:23824674 PMID:21873635 MGI:1277343 MGI:1347713, RGD:13792537 NCBI chr 1:230,454,314...230,539,332
Ensembl chr 1:230,454,426...230,539,331 		JBrowse link
acetyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 involved_in ISO (PMID:17371050) RGD PMID:17371050 NCBI chr 8:53,979,813...54,008,861
Ensembl chr 8:53,979,813...54,008,855 		JBrowse link
G Acly ATP citrate lyase involved_in NAS
ISO
IEA
IBA		 (PMID:1371749)
GO_REF:0000107
PMID:21873635
GO_REF:0000002		 RGD
Ensembl
InterPro		 PMID:1371749 PMID:2295639 PMID:21873635 GO_REF:0000002 GO_REF:0000107, RGD:631761, RGD:13792537 NCBI chr10:85,412,045...85,464,253
Ensembl chr10:85,412,049...85,463,320 		JBrowse link
G Acss1 acyl-CoA synthetase short-chain family member 1 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:16788062)
PMID:21873635
(MGI:2151932|PMID:11150295)		 RGD PMID:11150295 PMID:16788062 PMID:21873635 MGI:2151932, RGD:13792537 NCBI chr 3:139,450,383...139,500,325
Ensembl chr 3:139,450,383...139,500,325 		JBrowse link
G Acss2 acyl-CoA synthetase short-chain family member 2 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (MGI:2151932|PMID:11150295)
PMID:21873635		 RGD PMID:11150295 PMID:21873635 MGI:2151932, RGD:13792537 NCBI chr 3:144,003,808...144,047,452
Ensembl chr 3:144,004,336...144,059,675 		JBrowse link
G Dip2a disco-interacting protein 2 homolog A involved_in ISO (MGI:6478983|PMID:30672040) RGD PMID:30672040 MGI:6478983 NCBI chr20:12,284,566...12,371,068
Ensembl chr20:12,284,654...12,370,217 		JBrowse link
G Mlycd malonyl-CoA decarboxylase involved_in IDA
ISO
IBA
IEA		 (PMID:10417274), (PMID:10455107), (PMID:9869665)
PMID:21873635
GO_REF:0000041		 RGD
UniProt		 PMID:9869665 PMID:10417274 PMID:10455107 PMID:17316539 PMID:21873635 GO_REF:0000041, RGD:1600790, RGD:13792537 NCBI chr19:47,447,931...47,463,794
Ensembl chr19:47,447,970...47,463,793 		JBrowse link
G Ppcs phosphopantothenoylcysteine synthetase involved_in ISO (PMID:29754768) RGD PMID:29754768 NCBI chr 5:133,023,077...133,026,899
Ensembl chr 5:133,023,121...133,026,933 		JBrowse link
acetyl-CoA biosynthetic process from acetate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acss1 acyl-CoA synthetase short-chain family member 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:139,450,383...139,500,325
Ensembl chr 3:139,450,383...139,500,325 		JBrowse link
acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlat dihydrolipoamide S-acetyltransferase involved_in IDA
ISO		 MGI:2386703 (MGI:3719938|PMID:17314311), (MGI:5819147|PMID:27621431)
(PMID:24534072)		 RGD PMID:17314311 PMID:24534072 PMID:27621431 PMID:7487891 MGI:3719938 MGI:5819147, RGD:1599112 NCBI chr 8:50,979,151...51,004,435
Ensembl chr 8:50,978,051...51,004,479 		JBrowse link
G Dlat-ps1 dihydrolipoamide S-acetyltransferase, pseudogene 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:33,231,211...33,233,823
Ensembl chr 1:33,231,226...33,233,129 		JBrowse link
G Dld dihydrolipoamide dehydrogenase involved_in IDA
ISO		 MGI:2386703 (MGI:3719938|PMID:17314311), (MGI:5819147|PMID:27621431)
(PMID:24534072)		 RGD PMID:17314311 PMID:24534072 PMID:27621431 PMID:7487891 MGI:3719938 MGI:5819147, RGD:1599112 NCBI chr 6:47,904,153...47,924,814
Ensembl chr 6:47,903,914...47,924,795 		JBrowse link
G Mpc1 mitochondrial pyruvate carrier 1 involved_in
acts_upstream_of_or_within		 ISO (MGI:5428352|PMID:22628558) RGD PMID:22628558 MGI:5428352 NCBI chr 1:52,437,745...52,449,369
Ensembl chr 1:52,437,741...52,449,400 		JBrowse link
G Mpc2 mitochondrial pyruvate carrier 2 acts_upstream_of_or_within
involved_in		 ISO MGI:5635078 (MGI:5428352|PMID:22628558), (MGI:5576400|PMID:24910426) RGD PMID:22628558 PMID:24910426 MGI:5428352 MGI:5576400 NCBI chr13:77,728,176...77,747,664
Ensembl chr13:77,728,250...77,747,664 		JBrowse link
G Pdha1 pyruvate dehydrogenase E1 subunit alpha 1 involved_in
acts_upstream_of_or_within		 IDA
IBA
ISO
IEA		 PMID:21873635
GO_REF:0000114
MGI:2182095|MGI:2386703 (MGI:3817854|PMID:18586888)
(PMID:19081061), (PMID:24534072)
GO_REF:0000002		 ComplexPortal
RGD
InterPro		 PMID:18586888 PMID:19081061 PMID:24534072 PMID:7487891 PMID:21873635 GO_REF:0000002 GO_REF:0000114 MGI:3817854, RGD:1599112, RGD:13792537 NCBI chr  X:34,700,481...34,714,309
Ensembl chr  X:34,700,409...34,714,311 		JBrowse link
G Pdha1l1 pyruvate dehydrogenase (lipoamide) alpha 1-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:82,511,483...82,514,378
Ensembl chr16:82,511,511...82,514,372 		JBrowse link
G Pdha2 pyruvate dehydrogenase E1 subunit alpha 2 involved_in IDA
IBA		 PMID:21873635 RGD
GO_Central		 PMID:7487891 PMID:21873635 RGD:1599112, RGD:13792537 NCBI chr 2:229,872,300...229,873,848 JBrowse link
G Pdhb pyruvate dehydrogenase E1 subunit beta involved_in IDA
ISO
IEA
IBA		 GO_REF:0000114
(PMID:19081061), (PMID:24534072)
GO_REF:0000107
PMID:21873635
GO_REF:0000002		 ComplexPortal
RGD
Ensembl
InterPro		 PMID:19081061 PMID:24534072 PMID:7487891 PMID:21873635 GO_REF:0000002 GO_REF:0000107 GO_REF:0000114, RGD:1599112, RGD:13792537 NCBI chr15:16,752,561...16,758,503
Ensembl chr15:16,750,980...16,758,500 		JBrowse link
G Pdhx pyruvate dehydrogenase complex, component X involved_in ISO (PMID:24534072) RGD PMID:24534072 NCBI chr 3:89,372,472...89,396,759
Ensembl chr 3:89,371,497...89,431,773 		JBrowse link
G Pdk4 pyruvate dehydrogenase kinase 4 TAS RGD PMID:12435272 RGD:729541 NCBI chr 4:33,591,796...33,601,798
Ensembl chr 4:33,589,799...33,601,850 		JBrowse link
chondroitin sulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07047835.1 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 Ensembl chr 5:48,925,362...48,927,475 JBrowse link
G B4galnt3 beta-1,4-N-acetyl-galactosaminyl transferase 3 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 4:153,410,907...153,509,019
Ensembl chr 4:153,409,004...153,509,321 		JBrowse link
G B4galnt4 beta-1,4-N-acetyl-galactosaminyl transferase 4 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 1:196,171,394...196,182,294
Ensembl chr 1:196,171,394...196,182,294 		JBrowse link
G Chpf chondroitin polymerizing factor involved_in
acts_upstream_of_or_within		 ISO
IBA		 MGI:1926173|MGI:2681120 (MGI:5462286|PMID:22952769), (MGI:7266375|PMID:17253960)
(PMID:12761225)
PMID:21873635
MGI:2681120|MGI:5464019 (MGI:5462280|PMID:22952873), (MGI:5462286|PMID:22952769)		 RGD PMID:12761225 PMID:17253960 PMID:22952769 PMID:22952873 PMID:21873635 MGI:5462280 MGI:5462286 MGI:7266375, RGD:13792537 NCBI chr 9:76,963,178...76,967,878
Ensembl chr 9:76,963,184...76,967,878 		JBrowse link
G Chpf2 chondroitin polymerizing factor 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:10,578,470...10,585,940
Ensembl chr 4:10,580,462...10,585,916 		JBrowse link
G Chst11 carbohydrate sulfotransferase 11 acts_upstream_of_or_within
involved_in		 ISO MGI:1926002 (MGI:1354846|PMID:10722746), (MGI:4941099|PMID:21138417)
(PMID:11056388)		 RGD PMID:10722746 PMID:11056388 PMID:21138417 MGI:1354846 MGI:4941099 NCBI chr 7:20,524,535...20,743,008
Ensembl chr 7:20,528,100...20,743,111 		JBrowse link
G Chst12 carbohydrate sulfotransferase 12 involved_in ISO (PMID:10781601) RGD PMID:10781601 NCBI chr12:14,110,631...14,129,099
Ensembl chr12:14,110,393...14,129,057 		JBrowse link
G Chst13 carbohydrate sulfotransferase 13 involved_in ISO (PMID:12080076) RGD PMID:12080076 NCBI chr 4:122,824,712...122,837,935
Ensembl chr 4:122,824,022...122,838,019 		JBrowse link
G Chst3 carbohydrate sulfotransferase 3 involved_in
acts_upstream_of_or_within		 IDA
IEA
IBA
ISO
ISS		 GO_REF:0000107
PMID:21873635
MGI:2176247 (MGI:1206144|PMID:9597547), (MGI:2156294|PMID:11696535)
(PMID:15215498), (PMID:9883891)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:9597547 PMID:9883891 PMID:11696535 PMID:15215498 PMID:16495484 More... GO_REF:0000024 GO_REF:0000107 MGI:1206144 MGI:2156294, RGD:1600854, RGD:13792537 NCBI chr20:28,114,387...28,152,046
Ensembl chr20:28,114,404...28,121,807 		JBrowse link
G Chst7 carbohydrate sulfotransferase 7 involved_in IBA
ISO		 PMID:21873635
(PMID:10781596)		 RGD PMID:10781596 PMID:21873635 RGD:13792537 NCBI chr  X:2,396,260...2,432,828
Ensembl chr  X:2,393,874...2,432,840 		JBrowse link
G Chsy1 chondroitin sulfate synthase 1 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:11514575)
PMID:21873635
MGI:106576 (MGI:5462286|PMID:22952769)		 RGD PMID:11514575 PMID:22952769 PMID:21873635 MGI:5462286, RGD:13792537 NCBI chr 1:119,689,626...119,750,711
Ensembl chr 1:119,686,350...119,750,601 		JBrowse link
G Chsy3 chondroitin sulfate synthase 3 involved_in ISO
IBA		 MGI:106576 (MGI:7266375|PMID:17253960)
PMID:21873635		 RGD PMID:17253960 PMID:21873635 MGI:7266375, RGD:13792537 NCBI chr18:52,644,356...52,901,257
Ensembl chr18:52,644,461...52,898,098 		JBrowse link
G Csgalnact1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 involved_in ISO
IBA		 (PMID:11514575), (PMID:12163485)
PMID:21873635
MGI:1926002|MGI:4868209 (MGI:3708435|PMID:17145758), (MGI:5620532|PMID:25568321), (MGI:6112811|PMID:29287114)		 RGD PMID:11514575 PMID:12163485 PMID:17145758 PMID:25568321 PMID:29287114 More... MGI:3708435 MGI:5620532 MGI:6112811, RGD:13792537 NCBI chr16:20,995,210...21,330,586
Ensembl chr16:21,235,784...21,330,319 		JBrowse link
G Csgalnact2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 involved_in ISO
IBA		 (MGI:5620532|PMID:25568321)
PMID:21873635		 RGD PMID:25568321 PMID:21873635 MGI:5620532, RGD:13792537 NCBI chr 4:151,271,774...151,308,856
Ensembl chr 4:151,277,645...151,308,839 		JBrowse link
G Slc35d1 solute carrier family 35 member D1 acts_upstream_of_or_within ISO MGI:3774133 (MGI:3771453|PMID:17952091) RGD PMID:17952091 MGI:3771453 NCBI chr 5:117,928,628...117,981,289
Ensembl chr 5:117,934,352...117,981,311 		JBrowse link
G Ugdh UDP-glucose 6-dehydrogenase involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:2675908|PMID:14505572)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:14505572 GO_REF:0000024 GO_REF:0000107 MGI:2675908 NCBI chr14:42,848,704...42,872,351
Ensembl chr14:42,848,854...42,872,354 		JBrowse link
G Xylt1 xylosyltransferase 1 involved_in IEA
ISO		 GO_REF:0000041
(MGI:5544658|PMID:24161523)		 UniProt
RGD		 PMID:24161523 GO_REF:0000041 MGI:5544658 NCBI chr 1:171,643,925...171,929,774
Ensembl chr 1:171,643,925...171,926,783 		JBrowse link
G Xylt2 xylosyltransferase 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr10:79,605,910...79,619,482
Ensembl chr10:79,606,007...79,619,391 		JBrowse link
cysteine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta synthase acts_upstream_of_or_within
involved_in		 ISO MGI:1857139 (MGI:3044255|PMID:15030387)
(PMID:24416422)		 RGD PMID:15030387 PMID:24416422 MGI:3044255 NCBI chr20:9,708,089...9,732,623
Ensembl chr20:9,708,090...9,732,764 		JBrowse link
G Cth cystathionine gamma-lyase involved_in IDA
ISO
IEA
ISS		 (PMID:10212249)
GO_REF:0000041
GO_REF:0000024		 RGD
UniProt		 PMID:10212249 PMID:9359866 GO_REF:0000024 GO_REF:0000041, RGD:1359024 NCBI chr 2:246,975,888...247,002,234
Ensembl chr 2:246,975,894...247,002,234 		JBrowse link
G Ggt1 gamma-glutamyltransferase 1 involved_in ISO
IEA		 (MGI:5294309|PMID:12468440)
GO_REF:0000107		 RGD
Ensembl		 PMID:12468440 GO_REF:0000107 MGI:5294309 NCBI chr20:13,074,695...13,104,095
Ensembl chr20:13,074,700...13,108,442 		JBrowse link
cysteine biosynthetic process from serine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta synthase involved_in TAS
IBA
IEA		 PMID:21873635
GO_REF:0000104		 UniProt
RGD		 PMID:9359866 PMID:21873635 GO_REF:0000104, RGD:1359024, RGD:13792537 NCBI chr20:9,708,089...9,732,623
Ensembl chr20:9,708,090...9,732,764 		JBrowse link
cysteine biosynthetic process via cystathionine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta synthase involved_in IEA GO_REF:0000002
GO_REF:0000104		 InterPro
UniProt		 GO_REF:0000002 GO_REF:0000104 NCBI chr20:9,708,089...9,732,623
Ensembl chr20:9,708,090...9,732,764 		JBrowse link
G Cth cystathionine gamma-lyase involved_in ISO
IBA
IEA		 (PMID:19428278)
PMID:21873635
GO_REF:0000107		 RGD
Ensembl		 PMID:19428278 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 2:246,975,888...247,002,234
Ensembl chr 2:246,975,894...247,002,234 		JBrowse link
dermatan sulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chst12 carbohydrate sulfotransferase 12 involved_in ISO (PMID:10781601) RGD PMID:10781601 NCBI chr12:14,110,631...14,129,099
Ensembl chr12:14,110,393...14,129,057 		JBrowse link
G Chst14 carbohydrate sulfotransferase 14 acts_upstream_of_or_within ISO (PMID:11470797) RGD PMID:11470797 NCBI chr 3:105,916,481...105,918,538
Ensembl chr 3:105,916,466...105,918,548 		JBrowse link
G Dse dermatan sulfate epimerase involved_in ISO (PMID:16505484) RGD PMID:16505484 NCBI chr20:26,118,194...26,196,889
Ensembl chr20:26,118,196...26,196,992 		JBrowse link
fatty-acyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcdh glutaryl-CoA dehydrogenase involved_in IDA
IBA		 PMID:21873635 RGD
GO_Central		 PMID:6895440 PMID:21873635 RGD:1598697, RGD:13792537 NCBI chr19:23,263,215...23,269,689
Ensembl chr19:23,263,264...23,269,681 		JBrowse link
glutathione derivative biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gsta1 glutathione S-transferase alpha 1 involved_in ISO (PMID:9084911) RGD PMID:9084911 NCBI chr 9:23,703,476...23,720,121
Ensembl chr 9:23,703,477...23,720,121 		JBrowse link
G Gsta2 glutathione S-transferase alpha 2 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 8:79,184,535...79,196,827
Ensembl chr 8:79,184,322...79,196,798 		JBrowse link
G Gstm1 glutathione S-transferase mu 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:9084911)		 UniProt
RGD		 PMID:9084911 GO_REF:0000024 NCBI chr 2:195,649,845...195,655,402
Ensembl chr 2:195,649,845...195,655,411 		JBrowse link
G Gstp1 glutathione S-transferase pi 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:9084911)		 UniProt
RGD		 PMID:9084911 GO_REF:0000024 NCBI chr 1:201,337,762...201,340,230
Ensembl chr 1:201,321,672...201,340,226 		JBrowse link
heparan sulfate proteoglycan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3gat3 beta-1,3-glucuronyltransferase 3 involved_in
acts_upstream_of_or_within		 ISO (PMID:25893793)
(PMID:21763480)		 RGD PMID:21763480 PMID:25893793 NCBI chr 1:205,817,374...205,823,928
Ensembl chr 1:205,817,378...205,837,807 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within		 ISO (MGI:3687782|PMID:10639137), (MGI:7276136|PMID:30377379)
(PMID:10639137), (PMID:9620772)
(MGI:4431165|PMID:20080592)		 RGD PMID:9620772 PMID:10639137 PMID:20080592 PMID:30377379 MGI:3687782 MGI:4431165 MGI:7276136 NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357 		JBrowse link
G Ext2 exostosin glycosyltransferase 2 involved_in
acts_upstream_of_or_within		 ISO MGI:894663 (MGI:3687782|PMID:10639137)
(PMID:17761672)
MGI:3608690 (MGI:3608483|PMID:16236767)		 RGD PMID:10639137 PMID:16236767 PMID:17761672 MGI:3608483 MGI:3687782 NCBI chr 3:79,665,415...79,798,077
Ensembl chr 3:79,665,415...79,798,059 		JBrowse link
G Extl1 exostosin-like glycosyltransferase 1 involved_in ISO (PMID:11390981) RGD PMID:11390981 NCBI chr 5:146,573,911...146,589,115
Ensembl chr 5:146,573,912...146,589,115 		JBrowse link
G Extl3 exostosin-like glycosyltransferase 3 involved_in ISO (MGI:3844390|PMID:19336225)
(PMID:11390981), (PMID:28132690), (PMID:28148688), (PMID:35676258)		 RGD PMID:11390981 PMID:19336225 PMID:28132690 PMID:28148688 PMID:35676258 MGI:3844390 NCBI chr15:39,294,033...39,384,086
Ensembl chr15:39,293,605...39,338,898 		JBrowse link
G Glce glucuronic acid epimerase involved_in ISO
IBA		 (MGI:2135754|PMID:11279150), (MGI:7276136|PMID:30377379)
PMID:21873635
(PMID:20118238), (PMID:30872481)		 RGD PMID:11279150 PMID:20118238 PMID:30377379 PMID:30872481 PMID:21873635 MGI:2135754 MGI:7276136, RGD:13792537 NCBI chr 8:62,546,104...62,612,144
Ensembl chr 8:62,546,107...62,612,040 		JBrowse link
G Hs2st1 heparan sulfate 2-O-sulfotransferase 1 involved_in ISO MGI:4439258 (MGI:4438521|PMID:19889634), (MGI:7276136|PMID:30377379) RGD PMID:19889634 PMID:30377379 MGI:4438521 MGI:7276136 NCBI chr 2:233,508,018...233,641,769
Ensembl chr 2:233,508,021...233,641,769 		JBrowse link
G Hs3st1 heparan sulfate-glucosamine 3-sulfotransferase 1 involved_in IEA
ISO		 GO_REF:0000107
(MGI:1098372|PMID:9346953), (MGI:7276136|PMID:30377379), (MGI:7278686|PMID:24247246)		 Ensembl
RGD		 PMID:9346953 PMID:24247246 PMID:30377379 GO_REF:0000107 MGI:1098372 MGI:7276136 MGI:7278686 NCBI chr14:71,185,826...71,223,263
Ensembl chr14:71,185,682...71,223,248 		JBrowse link
G Hs3st2 heparan sulfate-glucosamine 3-sulfotransferase 2 involved_in ISO MGI:5566804 (MGI:7276134|PMID:26731579) RGD PMID:26731579 MGI:7276134 NCBI chr 1:175,956,161...176,077,400
Ensembl chr 1:175,956,157...176,077,399 		JBrowse link
G Hs3st3a1 heparan sulfate-glucosamine 3-sulfotransferase 3A1 involved_in ISO MGI:5312610 (MGI:6871814|PMID:34653670) RGD PMID:34653670 MGI:6871814 NCBI chr10:49,092,850...49,180,676
Ensembl chr10:49,094,026...49,180,676 		JBrowse link
G Hs3st3b1 heparan sulfate-glucosamine 3-sulfotransferase 3B1 involved_in ISO (MGI:1860201|PMID:10520990) RGD PMID:10520990 MGI:1860201 NCBI chr10:48,561,473...48,593,970
Ensembl chr10:48,561,473...48,593,970 		JBrowse link
G Hs3st4 heparan sulfate-glucosamine 3-sulfotransferase 4 involved_in ISO (MGI:7276136|PMID:30377379) RGD PMID:30377379 MGI:7276136 NCBI chr 1:178,539,078...178,944,851
Ensembl chr 1:178,539,093...178,944,107 		JBrowse link
G Hs3st6 heparan sulfate-glucosamine 3-sulfotransferase 6 involved_in ISO (MGI:3579706|PMID:15303968) RGD PMID:15303968 MGI:3579706 NCBI chr10:13,781,999...13,788,133
Ensembl chr10:13,781,993...13,788,133 		JBrowse link
G Hs6st1 heparan sulfate 6-O-sulfotransferase 1 acts_upstream_of_or_within
involved_in		 ISO MGI:3715259 (MGI:3715036|PMID:17405882)
(MGI:2664002|PMID:12611590), (MGI:7276126|PMID:15226404), (MGI:7276136|PMID:30377379)		 RGD PMID:12611590 PMID:15226404 PMID:17405882 PMID:30377379 MGI:2664002 MGI:3715036 MGI:7276126 MGI:7276136 NCBI chr 9:38,283,502...38,322,684
Ensembl chr 9:38,282,395...38,322,683 		JBrowse link
G Hs6st2 heparan sulfate 6-O-sulfotransferase 2 involved_in ISO (MGI:2664002|PMID:12611590), (MGI:7276126|PMID:15226404), (MGI:7276136|PMID:30377379) RGD PMID:12611590 PMID:15226404 PMID:30377379 MGI:2664002 MGI:7276126 MGI:7276136 NCBI chr  X:130,966,547...131,261,629
Ensembl chr  X:130,968,385...131,261,492 		JBrowse link
G Hs6st3 heparan sulfate 6-O-sulfotransferase 3 involved_in ISO (MGI:2664002|PMID:12611590), (MGI:7276126|PMID:15226404) RGD PMID:12611590 PMID:15226404 MGI:2664002 MGI:7276126 NCBI chr15:96,281,502...97,000,804
Ensembl chr15:96,281,646...97,000,462 		JBrowse link
G Lipc lipase C, hepatic type IDA RGD PMID:15102889 RGD:1580511 NCBI chr 8:71,509,633...71,635,663
Ensembl chr 8:71,509,635...71,635,464 		JBrowse link
G Ndst1 N-deacetylase and N-sulfotransferase 1 involved_in IMP
ISO		 PMID:9915799
MGI:3589211|MGI:3589383 (MGI:3805404|PMID:18385133), (MGI:3806218|PMID:18487608), (MGI:6852186|PMID:23846497), (MGI:7276136|PMID:30377379)		 RGD PMID:18385133 PMID:18487608 PMID:23846497 PMID:30377379 PMID:9915799 MGI:3805404 MGI:3806218 MGI:6852186 MGI:7276136, RGD:12907548 NCBI chr18:54,136,887...54,199,545
Ensembl chr18:54,140,779...54,178,191 		JBrowse link
G Ndst2 N-deacetylase and N-sulfotransferase 2 acts_upstream_of_or_within
involved_in		 ISO MGI:1913285 (MGI:1343737|PMID:10466727)
(MGI:3806218|PMID:18487608), (MGI:5810238|PMID:27387504), (MGI:65699|PMID:8294485), (MGI:7276136|PMID:30377379)		 RGD PMID:8294485 PMID:10466727 PMID:18487608 PMID:27387504 PMID:30377379 MGI:1343737 MGI:3806218 MGI:5810238 MGI:65699 MGI:7276136 NCBI chr15:3,563,358...3,573,801
Ensembl chr15:3,563,358...3,573,801 		JBrowse link
G Ndst3 N-deacetylase and N-sulfotransferase 3 involved_in ISO MGI:3806156 (MGI:3805404|PMID:18385133)
(PMID:9915799)		 RGD PMID:9915799 PMID:18385133 MGI:3805404 NCBI chr 2:211,702,728...211,868,159
Ensembl chr 2:211,704,898...211,854,584 		JBrowse link
G Ugdh UDP-glucose 6-dehydrogenase involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:2675908|PMID:14505572)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:14505572 GO_REF:0000024 GO_REF:0000107 MGI:2675908 NCBI chr14:42,848,704...42,872,351
Ensembl chr14:42,848,854...42,872,354 		JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO MGI:1857642 (MGI:5498591|PMID:23760952) RGD PMID:23760952 MGI:5498591 NCBI chr13:84,462,731...84,489,404
Ensembl chr13:84,465,527...84,489,378 		JBrowse link
G Xylt1 xylosyltransferase 1 involved_in ISS
ISO
IEA
IBA		 GO_REF:0000024
(PMID:17189265)
GO_REF:0000041
PMID:21873635		 UniProt
RGD		 PMID:17189265 PMID:21873635 GO_REF:0000024 GO_REF:0000041, RGD:13792537 NCBI chr 1:171,643,925...171,929,774
Ensembl chr 1:171,643,925...171,926,783 		JBrowse link
G Xylt2 xylosyltransferase 2 involved_in IEA
ISO
IBA
ISS		 GO_REF:0000041
(PMID:17189265), (PMID:26027496)
PMID:21873635
GO_REF:0000024		 UniProt
RGD		 PMID:17189265 PMID:26027496 PMID:21873635 GO_REF:0000024 GO_REF:0000041, RGD:13792537 NCBI chr10:79,605,910...79,619,482
Ensembl chr10:79,606,007...79,619,391 		JBrowse link
heparan sulfate proteoglycan biosynthetic process, enzymatic modification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hs2st1 heparan sulfate 2-O-sulfotransferase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:233,508,018...233,641,769
Ensembl chr 2:233,508,021...233,641,769 		JBrowse link
G Hs3st5 heparan sulfate-glucosamine 3-sulfotransferase 5 involved_in ISO (PMID:12138164) RGD PMID:12138164 NCBI chr20:40,106,876...40,417,661
Ensembl chr20:40,106,876...40,417,653 		JBrowse link
G Hs6st1 heparan sulfate 6-O-sulfotransferase 1 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (MGI:1353793|PMID:10644753)
PMID:21873635		 RGD PMID:10644753 PMID:21873635 MGI:1353793, RGD:13792537 NCBI chr 9:38,283,502...38,322,684
Ensembl chr 9:38,282,395...38,322,683 		JBrowse link
G Hs6st2 heparan sulfate 6-O-sulfotransferase 2 acts_upstream_of_or_within
involved_in		 ISO
IBA		 (MGI:1353793|PMID:10644753)
PMID:21873635		 RGD PMID:10644753 PMID:21873635 MGI:1353793, RGD:13792537 NCBI chr  X:130,966,547...131,261,629
Ensembl chr  X:130,968,385...131,261,492 		JBrowse link
G Hs6st3 heparan sulfate 6-O-sulfotransferase 3 acts_upstream_of_or_within ISO (MGI:1353793|PMID:10644753) RGD PMID:10644753 MGI:1353793 NCBI chr15:96,281,502...97,000,804
Ensembl chr15:96,281,646...97,000,462 		JBrowse link
heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ext1 exostosin glycosyltransferase 1 involved_in ISO (PMID:17761672) RGD PMID:17761672 NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357 		JBrowse link
G Ext2 exostosin glycosyltransferase 2 involved_in ISO (PMID:17761672) RGD PMID:17761672 NCBI chr 3:79,665,415...79,798,077
Ensembl chr 3:79,665,415...79,798,059 		JBrowse link
G Hs2st1 heparan sulfate 2-O-sulfotransferase 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:1934916 (MGI:2150438|PMID:11457822)		 RGD PMID:11457822 PMID:21873635 MGI:2150438, RGD:13792537 NCBI chr 2:233,508,018...233,641,769
Ensembl chr 2:233,508,021...233,641,769 		JBrowse link
G Ndst1 N-deacetylase and N-sulfotransferase 1 involved_in IBA
ISO
IDA		 PMID:21873635
(MGI:6870964|PMID:10758005)
PMID:8483907
PMID:1379236		 RGD PMID:10758005 PMID:21873635 PMID:8483907 PMID:1379236 MGI:6870964, RGD:13792537, RGD:151356652, RGD:68801 NCBI chr18:54,136,887...54,199,545
Ensembl chr18:54,140,779...54,178,191 		JBrowse link
G Ndst2 N-deacetylase and N-sulfotransferase 2 involved_in IBA
ISO		 PMID:21873635
(MGI:6870964|PMID:10758005)		 RGD PMID:10758005 PMID:21873635 MGI:6870964, RGD:13792537 NCBI chr15:3,563,358...3,573,801
Ensembl chr15:3,563,358...3,573,801 		JBrowse link
G Ndst3 N-deacetylase and N-sulfotransferase 3 involved_in ISO
IBA		 (PMID:9915799)
PMID:21873635		 RGD PMID:9915799 PMID:21873635 RGD:13792537 NCBI chr 2:211,702,728...211,868,159
Ensembl chr 2:211,704,898...211,854,584 		JBrowse link
G Ndst4 N-deacetylase and N-sulfotransferase 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:213,787,010...214,116,569
Ensembl chr 2:213,787,006...214,115,373 		JBrowse link
heparin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angpt1 angiopoietin 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:19297368)		 Ensembl
RGD		 PMID:19297368 GO_REF:0000107 NCBI chr 7:73,528,345...73,783,953
Ensembl chr 7:73,531,486...73,784,067 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within_positive_effect ISO (MGI:1888607|PMID:10926768), (MGI:3050709|PMID:15161920), (MGI:3051956|PMID:15177029), (MGI:4360160|PMID:18480751)
MGI:108050 (MGI:6406739|PMID:21310272), (MGI:6406770|PMID:21148566)		 RGD PMID:10926768 PMID:15161920 PMID:15177029 PMID:18480751 PMID:21148566 More... MGI:1888607 MGI:3050709 MGI:3051956 MGI:4360160 MGI:6406739 MGI:6406770 NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357 		JBrowse link
G Ext2 exostosin glycosyltransferase 2 acts_upstream_of_or_within ISO MGI:894663 (MGI:6406739|PMID:21310272) RGD PMID:21310272 MGI:6406739 NCBI chr 3:79,665,415...79,798,077
Ensembl chr 3:79,665,415...79,798,059 		JBrowse link
G Glce glucuronic acid epimerase involved_in IEA
ISO		 GO_REF:0000041
(MGI:2135754|PMID:11279150)		 UniProt
RGD		 PMID:11279150 GO_REF:0000041 MGI:2135754 NCBI chr 8:62,546,104...62,612,144
Ensembl chr 8:62,546,107...62,612,040 		JBrowse link
G Ndst1 N-deacetylase and N-sulfotransferase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr18:54,136,887...54,199,545
Ensembl chr18:54,140,779...54,178,191 		JBrowse link
G Ndst2 N-deacetylase and N-sulfotransferase 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr15:3,563,358...3,573,801
Ensembl chr15:3,563,358...3,573,801 		JBrowse link
G Ndst3 N-deacetylase and N-sulfotransferase 3 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:211,702,728...211,868,159
Ensembl chr 2:211,704,898...211,854,584 		JBrowse link
G Ndst4 N-deacetylase and N-sulfotransferase 4 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:213,787,010...214,116,569
Ensembl chr 2:213,787,006...214,115,373 		JBrowse link
G Slc10a7 solute carrier family 10, member 7 involved_in ISO (MGI:6198941|PMID:30082715)
(PMID:30082715)		 RGD PMID:30082715 MGI:6198941 NCBI chr19:29,183,143...29,407,470
Ensembl chr19:29,183,155...29,407,464 		JBrowse link
G Xylt2 xylosyltransferase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3714171 (MGI:3713963|PMID:17517600)		 Ensembl
RGD		 PMID:17517600 GO_REF:0000107 MGI:3713963 NCBI chr10:79,605,910...79,619,482
Ensembl chr10:79,606,007...79,619,391 		JBrowse link
hydrogen sulfide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta synthase involved_in IDA
ISO		 PMID:20149843
(PMID:15520012), (PMID:24416422)		 RGD PMID:15520012 PMID:24416422 PMID:20149843 RGD:8554341 NCBI chr20:9,708,089...9,732,623
Ensembl chr20:9,708,090...9,732,764 		JBrowse link
G Cth cystathionine gamma-lyase involved_in ISO
IEA
ISS		 (PMID:19019829)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:19019829 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:246,975,888...247,002,234
Ensembl chr 2:246,975,894...247,002,234 		JBrowse link
G Mpst mercaptopyruvate sulfurtransferase involved_in ISO
ISS		 (MGI:5487538|PMID:18855522), (MGI:6120294|PMID:28079151)
GO_REF:0000024		 RGD
UniProt		 PMID:18855522 PMID:28079151 GO_REF:0000024 MGI:5487538 MGI:6120294 NCBI chr 7:109,955,581...109,963,155
Ensembl chr 7:109,955,675...109,963,141 		JBrowse link
keratan sulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3gnt7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 involved_in ISS
ISO		 GO_REF:0000024
(MGI:6151274|PMID:29625490)
(PMID:17690104)		 UniProt
RGD		 PMID:17690104 PMID:29625490 GO_REF:0000024 MGI:6151274 NCBI chr 9:86,956,220...86,960,171
Ensembl chr 9:86,956,220...86,960,170 		JBrowse link
G B4galt4 beta-1,4-galactosyltransferase 4 involved_in ISO
ISS		 (PMID:17690104), (PMID:32827291)
GO_REF:0000024		 RGD
UniProt		 PMID:17690104 PMID:32827291 GO_REF:0000024 NCBI chr11:61,995,807...62,021,751
Ensembl chr11:61,995,814...62,021,671 		JBrowse link
G Chst1 carbohydrate sulfotransferase 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:17690104)		 UniProt
RGD		 PMID:17690104 GO_REF:0000024 NCBI chr 3:78,552,059...78,574,736
Ensembl chr 3:78,548,525...78,574,883 		JBrowse link
G Chst5 carbohydrate sulfotransferase 5 involved_in IBA
ISO		 PMID:21873635
(PMID:11278593), (PMID:17690104)
(MGI:1934540|PMID:11278593)		 RGD PMID:11278593 PMID:17690104 PMID:21873635 MGI:1934540, RGD:13792537 NCBI chr19:39,860,729...39,881,019
Ensembl chr19:39,860,501...39,881,064 		JBrowse link
L-methionine salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhmt betaine-homocysteine S-methyltransferase involved_in IBA
ISO
IEA		 PMID:21873635
(PMID:18230605)
GO_REF:0000107		 RGD
Ensembl		 PMID:18230605 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 2:24,859,871...24,879,449
Ensembl chr 2:24,859,873...24,879,742 		JBrowse link
G Bhmt2 betaine-homocysteine S-methyltransferase 2 involved_in IBA
ISO
IEA		 PMID:21873635
(PMID:18230605)
GO_REF:0000107		 RGD
Ensembl		 PMID:18230605 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 2:24,895,525...24,912,475
Ensembl chr 2:24,895,533...24,912,475 		JBrowse link
L-methionine salvage from methylthioadenosine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adi1 acireductone dioxygenase 1 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:15938715)
GO_REF:0000041		 UniProt
RGD		 PMID:15938715 GO_REF:0000024 GO_REF:0000041 NCBI chr 6:45,306,885...45,313,847
Ensembl chr 6:45,306,841...45,313,842 		JBrowse link
G Apip APAF1 interacting protein involved_in IBA
ISO
IEA		 PMID:21873635
(PMID:22837397), (PMID:23285211)
GO_REF:0000041		 RGD
UniProt		 PMID:22837397 PMID:23285211 PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 3:89,431,973...89,457,999
Ensembl chr 3:89,432,037...89,458,340 		JBrowse link
G Enoph1 enolase-phosphatase 1 involved_in IEA
ISO
IBA
ISS		 GO_REF:0000041
(PMID:15843022)
PMID:21873635
GO_REF:0000024		 UniProt
RGD		 PMID:15843022 PMID:21873635 GO_REF:0000024 GO_REF:0000041, RGD:13792537 NCBI chr14:9,531,336...9,557,797
Ensembl chr14:9,531,339...9,569,273 		JBrowse link
G Mri1 methylthioribose-1-phosphate isomerase 1 involved_in IEA
IBA		 GO_REF:0000041
PMID:21873635		 UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr19:23,907,335...23,913,320
Ensembl chr19:23,907,335...23,913,320 		JBrowse link
G Mtap methylthioadenosine phosphorylase involved_in IEA
IBA		 GO_REF:0000041
PMID:21873635		 UniProt PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 5:103,873,020...103,939,406
Ensembl chr 5:103,873,020...103,939,406 		JBrowse link
L-methionine salvage from S-adenosylmethionine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apip APAF1 interacting protein involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 3:89,431,973...89,457,999
Ensembl chr 3:89,432,037...89,458,340 		JBrowse link
G Enoph1 enolase-phosphatase 1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr14:9,531,336...9,557,797
Ensembl chr14:9,531,339...9,569,273 		JBrowse link
G Mri1 methylthioribose-1-phosphate isomerase 1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr19:23,907,335...23,913,320
Ensembl chr19:23,907,335...23,913,320 		JBrowse link
leukotriene D4 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ggt1 gamma-glutamyltransferase 1 involved_in ISO (PMID:14754911), (PMID:21447318) RGD PMID:14754911 PMID:21447318 NCBI chr20:13,074,695...13,104,095
Ensembl chr20:13,074,700...13,108,442 		JBrowse link
G Ggt5 gamma-glutamyltransferase 5 involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA
ISS		 GO_REF:0000107
(PMID:1676842), (PMID:21447318)
MGI:2182354 (MGI:1306746|PMID:9774450), (MGI:2384601|PMID:12163373)
PMID:21873635
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:1676842 PMID:9774450 PMID:12163373 PMID:21447318 PMID:21873635 GO_REF:0000024 GO_REF:0000107 MGI:1306746 MGI:2384601, RGD:13792537 NCBI chr20:13,043,255...13,071,523
Ensembl chr20:13,043,257...13,071,450 		JBrowse link
lipoate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Htd2 hydroxyacyl-thioester dehydratase type 2 acts_upstream_of_or_within ISO (MGI:6755648|PMID:33774475) RGD PMID:33774475 MGI:6755648 NCBI chr 2:105,222,958...105,223,419 JBrowse link
G Lias lipoic acid synthetase acts_upstream_of_or_within
involved_in		 ISO
IBA		 UniProtKB:P60716 (MGI:2135807|PMID:11389890)
PMID:21873635		 RGD PMID:11389890 PMID:21873635 MGI:2135807, RGD:13792537 NCBI chr14:42,876,699...42,893,824
Ensembl chr14:42,876,699...42,893,783 		JBrowse link
long-chain fatty-acyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsl1 acyl-CoA synthetase long-chain family member 1 involved_in IGI
IBA		 PMID:21873635 RGD
GO_Central		 PMID:16466685 PMID:21873635 RGD:2312800, RGD:13792537 NCBI chr16:45,755,246...45,821,541
Ensembl chr16:45,755,254...45,821,541 		JBrowse link
G Acsl4 acyl-CoA synthetase long-chain family member 4 IGI RGD PMID:16466685 RGD:2312800 NCBI chr  X:105,942,794...106,006,573
Ensembl chr  X:105,942,799...106,006,427 		JBrowse link
G Acsl5 acyl-CoA synthetase long-chain family member 5 involved_in IGI
IBA		 PMID:21873635 RGD
GO_Central		 PMID:16466685 PMID:21873635 RGD:2312800, RGD:13792537 NCBI chr 1:254,289,513...254,336,608
Ensembl chr 1:254,292,521...254,336,607 		JBrowse link
G Acsl6 acyl-CoA synthetase long-chain family member 6 involved_in IGI
IBA		 PMID:21873635 RGD
GO_Central		 PMID:16466685 PMID:21873635 RGD:2312800, RGD:13792537 NCBI chr10:38,439,914...38,501,182
Ensembl chr10:38,440,080...38,498,757 		JBrowse link
G Elovl1 ELOVL fatty acid elongase 1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 5:131,961,478...131,965,961
Ensembl chr 5:131,961,322...131,965,958 		JBrowse link
G Elovl3 ELOVL fatty acid elongase 3 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 1:244,997,287...245,001,115
Ensembl chr 1:244,997,287...245,001,115 		JBrowse link
G Elovl4 ELOVL fatty acid elongase 4 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 8:84,702,916...84,729,466
Ensembl chr 8:84,702,362...84,729,697 		JBrowse link
G Elovl5 ELOVL fatty acid elongase 5 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 8:78,790,799...78,857,307
Ensembl chr 8:78,790,846...78,857,284 		JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 2:218,063,682...218,174,767
Ensembl chr 2:218,063,804...218,171,186 		JBrowse link
G Elovl7 ELOVL fatty acid elongase 7 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 2:39,789,229...39,858,579
Ensembl chr 2:39,789,250...39,856,845 		JBrowse link
malonyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acaca acetyl-CoA carboxylase alpha involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr10:69,014,261...69,276,453
Ensembl chr10:69,014,170...69,276,457 		JBrowse link
G Acacb acetyl-CoA carboxylase beta involved_in IEA
ISO		 GO_REF:0000041
(MGI:3804564|PMID:18487439)		 UniProt
RGD		 PMID:18487439 GO_REF:0000041 MGI:3804564 NCBI chr12:42,365,800...42,477,651
Ensembl chr12:42,366,548...42,457,655 		JBrowse link
methionine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhmt betaine-homocysteine S-methyltransferase acts_upstream_of_or_within IDA
ISO		 (MGI:3510291|PMID:15217352) RGD PMID:15217352 PMID:15845641 MGI:3510291, RGD:1359026 NCBI chr 2:24,859,871...24,879,449
Ensembl chr 2:24,859,873...24,879,742 		JBrowse link
G Bhmt2 betaine-homocysteine S-methyltransferase 2 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 2:24,895,525...24,912,475
Ensembl chr 2:24,895,533...24,912,475 		JBrowse link
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in ISO (PMID:25633902) RGD PMID:25633902 NCBI chr 6:94,977,862...95,045,375
Ensembl chr 6:94,977,862...95,045,372 		JBrowse link
G Mthfd2l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:17,089,947...17,170,036
Ensembl chr14:17,089,952...17,170,112 		JBrowse link
G Mthfr methylenetetrahydrofolate reductase acts_upstream_of_or_within
involved_in		 ISO
IBA		 MGI:2385823 (MGI:3510291|PMID:15217352)
PMID:21873635		 RGD PMID:15217352 PMID:21873635 MGI:3510291, RGD:13792537 NCBI chr 5:158,465,248...158,484,999
Ensembl chr 5:158,465,296...158,483,797 		JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase involved_in
acts_upstream_of_or_within		 IDA
IBA
IEA
ISO		 PMID:21873635
GO_REF:0000117
(PMID:23825108)
MGI:2180496 (MGI:1930456|PMID:11158293)		 UniProt
RGD		 PMID:11158293 PMID:23825108 PMID:15845641 PMID:21873635 PMID:11730351 GO_REF:0000117 MGI:1930456, RGD:1359026, RGD:13792537, RGD:1601423 NCBI chr17:58,219,998...58,308,560
Ensembl chr17:58,220,071...58,304,822 		JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase involved_in ISO
IBA		 (PMID:11466310)
(MGI:3710265|PMID:17369066)
PMID:21873635		 RGD PMID:11466310 PMID:17369066 PMID:21873635 MGI:3710265, RGD:13792537 NCBI chr 1:34,866,991...34,899,425
Ensembl chr 1:34,867,089...34,899,425 		JBrowse link
negative regulation of hydrogen sulfide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir21 microRNA 21 involved_in ISO (PMID:22034194) RGD PMID:22034194 NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348 		JBrowse link
positive regulation of heparan sulfate proteoglycan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 involved_in ISS
ISO
IEA		 GO_REF:0000024
(PMID:15853773)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:15853773 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Pxylp1 2-phosphoxylose phosphatase 1 involved_in ISO
ISS		 (PMID:24425863)
GO_REF:0000024		 RGD
UniProt		 PMID:24425863 GO_REF:0000024 NCBI chr 8:97,419,766...97,485,163
Ensembl chr 8:97,419,776...97,485,064 		JBrowse link
G Tcf7l2 transcription factor 7 like 2 involved_in ISO (PMID:15853773) RGD PMID:15853773 NCBI chr 1:254,785,956...254,978,967
Ensembl chr 1:254,786,091...254,978,967 		JBrowse link
positive regulation of hydrogen sulfide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sp1 Sp1 transcription factor involved_in ISO (PMID:21659522) RGD PMID:21659522 NCBI chr 7:133,541,302...133,571,961
Ensembl chr 7:133,541,491...133,571,961 		JBrowse link
propionyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 involved_in ISO (PMID:17371050) RGD PMID:17371050 NCBI chr 8:53,979,813...54,008,861
Ensembl chr 8:53,979,813...54,008,855 		JBrowse link
regulation of acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdk1 pyruvate dehydrogenase kinase 1 involved_in IEA
ISO		 GO_REF:0000107
(MGI:5487511|PMID:22195962)		 Ensembl
RGD		 PMID:22195962 GO_REF:0000107 MGI:5487511 NCBI chr 3:56,705,824...56,733,040
Ensembl chr 3:56,705,871...56,733,038 		JBrowse link
G Pdk2 pyruvate dehydrogenase kinase 2 involved_in ISO
ISS		 (MGI:5428826|PMID:22360721)
GO_REF:0000024		 RGD
UniProt		 PMID:22360721 GO_REF:0000024 MGI:5428826 NCBI chr10:79,972,550...79,987,074
Ensembl chr10:79,972,556...79,987,085 		JBrowse link
G Pdk3 pyruvate dehydrogenase kinase 3 involved_in ISO (PMID:22865452) RGD PMID:22865452 NCBI chr  X:58,477,471...58,553,932
Ensembl chr  X:58,486,554...58,553,557 		JBrowse link
G Pdk4 pyruvate dehydrogenase kinase 4 involved_in ISS
ISO		 GO_REF:0000024
(PMID:21852536)
(MGI:3692363|PMID:16606348)		 UniProt
RGD		 PMID:16606348 PMID:21852536 GO_REF:0000024 MGI:3692363 NCBI chr 4:33,591,796...33,601,798
Ensembl chr 4:33,589,799...33,601,850 		JBrowse link
regulation of acyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snca synuclein alpha acts_upstream_of_or_within ISO MGI:2389489 (MGI:3628986|PMID:16636270), (MGI:3629421|PMID:16734431) RGD PMID:16636270 PMID:16734431 MGI:3628986 MGI:3629421 NCBI chr 4:89,696,420...89,797,240
Ensembl chr 4:89,696,420...89,796,262 		JBrowse link
regulation of heparan sulfate proteoglycan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tm9sf2 transmembrane 9 superfamily member 2 involved_in ISO (PMID:28404855) RGD PMID:28404855 NCBI chr15:99,201,556...99,254,054
Ensembl chr15:99,201,489...99,254,049 		JBrowse link
S-adenosylmethionine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mat1a methionine adenosyltransferase 1A involved_in IDA
IBA
ISO
IEA		 PMID:21873635
(PMID:10677294), (PMID:25075345)
GO_REF:0000041		 RGD
UniProt		 PMID:10677294 PMID:25075345 PMID:9202427 PMID:21873635 PMID:19497982 More... GO_REF:0000041, RGD:1359039, RGD:13792537, RGD:7242770, RGD:7242777 NCBI chr16:16,983,084...17,001,284
Ensembl chr16:16,983,022...17,001,274 		JBrowse link
G Mat2a methionine adenosyltransferase 2A involved_in
acts_upstream_of_or_within		 TAS
IBA
ISO
IEA
IDA		 PMID:21873635
(PMID:10644686), (PMID:25075345)
(MGI:2183618|PMID:12023972)
GO_REF:0000041		 RGD
UniProt		 PMID:10644686 PMID:12023972 PMID:25075345 PMID:11099469 PMID:21873635 More... GO_REF:0000041 MGI:2183618, RGD:1359040, RGD:13792537, RGD:7242777, RGD:727376 NCBI chr 4:104,489,877...104,495,447
Ensembl chr 4:104,488,466...104,495,493 		JBrowse link
G Mat2b methionine adenosyltransferase 2B involved_in ISS
ISO
IEA
IBA		 GO_REF:0000024
(PMID:10644686), (PMID:25075345)
GO_REF:0000041
PMID:21873635		 UniProt
RGD		 PMID:10644686 PMID:25075345 PMID:21873635 GO_REF:0000024 GO_REF:0000041, RGD:13792537 NCBI chr10:25,106,928...25,122,982
Ensembl chr10:25,106,930...25,122,777 		JBrowse link
G Mettl16 methyltransferase 16, N6-methyladenosine acts_upstream_of ISO (MGI:6199095|PMID:30197299)
(PMID:28525753), (PMID:30197297), (PMID:30197299)		 RGD PMID:28525753 PMID:30197297 PMID:30197299 MGI:6199095 NCBI chr10:59,640,915...59,697,291
Ensembl chr10:59,640,972...59,687,061 		JBrowse link
G RGD1560523 similar to S-adenosylmethionine synthetase gamma form (Methionine adenosyltransferase) involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr13:26,088,997...26,090,862
Ensembl chr13:26,089,606...26,090,793 		JBrowse link
succinyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mmut methylmalonyl-CoA mutase involved_in ISO (MGI:64406|PMID:7904153) RGD PMID:7904153 MGI:64406 NCBI chr 9:19,928,720...19,956,985
Ensembl chr 9:19,928,727...19,957,046 		JBrowse link
taurine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdo1 cysteine dioxygenase type 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr18:39,432,473...39,447,253
Ensembl chr18:39,432,474...39,447,296 		JBrowse link
G Csad cysteine sulfinic acid decarboxylase involved_in
acts_upstream_of_or_within		 TAS
IEA
ISO
IBA		 GO_REF:0000041
MGI:4331536 (MGI:5698334|PMID:24639894)
PMID:21873635		 UniProt
RGD		 PMID:24639894 PMID:7772604 PMID:21873635 GO_REF:0000041 MGI:5698334, RGD:632596, RGD:13792537 NCBI chr 7:133,308,571...133,337,914
Ensembl chr 7:133,308,574...133,337,615 		JBrowse link
G Fmo1 flavin containing dimethylaniline monoxygenase 1 involved_in ISO
ISS		 (MGI:6881635|PMID:32156684)
GO_REF:0000024
(PMID:32156684)		 RGD
UniProt		 PMID:32156684 GO_REF:0000024 MGI:6881635 NCBI chr13:75,182,184...75,214,439
Ensembl chr13:75,182,176...75,214,647 		JBrowse link
G Fmo3 flavin containing dimethylaniline monoxygenase 3 involved_in ISO
IEA		 (PMID:32156684)
GO_REF:0000107		 RGD
Ensembl		 PMID:32156684 GO_REF:0000107 NCBI chr13:75,309,367...75,334,915
Ensembl chr13:75,309,374...75,328,028 		JBrowse link
thiamine diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tpk1 thiamin pyrophosphokinase 1 involved_in IBA
ISO
IEA		 PMID:21873635
(PMID:11342111)
GO_REF:0000041		 RGD
UniProt		 PMID:11342111 PMID:21873635 GO_REF:0000041, RGD:13792537 NCBI chr 4:72,170,134...72,557,707
Ensembl chr 4:72,170,134...72,557,694 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19746
    metabolic process 12044
      cellular metabolic process 9531
        sulfur compound metabolic process 303
          sulfur compound biosynthetic process 126
            3'-phosphoadenosine 5'-phosphosulfate biosynthetic process 2
            4-amino-3-isothiazolidinone biosynthetic process 0
            S-adenosylmethionine biosynthetic process 5
            S-glycoside biosynthetic process + 0
            S-methylmethionine biosynthetic process 0
            alkanesulfonate biosynthetic process + 4
            bacillithiol biosynthetic process 0
            biotin biosynthetic process 0
            camalexin biosynthetic process + 0
            cephalosporin biosynthetic process + 0
            cephamycin C biosynthetic process 0
            chondroitin sulfate biosynthetic process 18
            coenzyme M biosynthetic process 0
            dermatan sulfate biosynthetic process 3
            epothilone biosynthetic process 0
            gliotoxin biosynthetic process + 0
            glutathione derivative biosynthetic process + 4
            glycosinolate biosynthetic process + 0
            heparan sulfate proteoglycan biosynthetic process + 30
            heparin biosynthetic process 10
            hercynylcysteine sulfoxide biosynthetic process 0
            hydrogen sulfide biosynthetic process + 5
            keratan sulfate biosynthetic process 4
            leukotriene D4 biosynthetic process 2
            lipoate biosynthetic process 2
            methionine catabolic process to 3-methylthiopropanoate 0
            methionine catabolic process to 3-methylthiopropanol 0
            morphine biosynthetic process 0
            mycothiol biosynthetic process 0
            penicillin biosynthetic process + 0
            pyochelin biosynthetic process 0
            streptomycin biosynthetic process 0
            sulfolipid biosynthetic process 0
            sulfur amino acid biosynthetic process + 15
            thiamine-containing compound biosynthetic process + 1
            thiazole biosynthetic process 0
            thioester biosynthetic process + 36
            vistamycin biosynthetic process 0
paths to the root