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ONTOLOGY REPORT - ANNOTATIONS


Term:sulfur compound biosynthetic process
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Accession:GO:0044272 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of compounds that contain sulfur, such as the amino acids methionine and cysteine or the tripeptide glutathione.
Synonyms:exact_synonym: sulfur compound anabolism;   sulfur compound biosynthesis;   sulfur compound formation;   sulfur compound synthesis
 narrow_synonym: sulfur biosynthesis;   sulfur biosynthetic process



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'de novo' L-methionine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhmt betaine-homocysteine S-methyltransferase involved_in ISO
IEA
(PMID:10529246)
GO_REF:0000107
RGD
Ensembl
PMID:10529246 GO_REF:0000107 NCBI chr 2:24,859,871...24,879,449
Ensembl chr 2:24,859,873...24,879,742
JBrowse link
3'-phosphoadenosine 5'-phosphosulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Papss1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:14747722), (PMID:23207770)
(PMID:12414806)
(PMID:7493984), (PMID:9545271)
GO_REF:0000033
RGD
GO_Central
PMID:7493984 PMID:9545271 PMID:12414806 PMID:14747722 PMID:23207770 GO_REF:0000033 NCBI chr 2:220,040,343...220,114,399
Ensembl chr 2:220,040,312...220,114,395
JBrowse link
G Papss2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 involved_in ISO
IBA
(PMID:23824674)
MGI:1856688 (MGI:1347713|PMID:10559207), (PMID:9671738)
GO_REF:0000033
RGD
GO_Central
PMID:9671738 PMID:10559207 PMID:23824674 GO_REF:0000033 MGI:1347713 NCBI chr 1:230,454,314...230,539,332
Ensembl chr 1:230,454,426...230,539,331
JBrowse link
acetyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 involved_in ISO (PMID:17371050) RGD PMID:17371050 NCBI chr 8:53,979,813...54,008,861
Ensembl chr 8:53,979,813...54,008,855
JBrowse link
G Acly ATP citrate lyase involved_in NAS
IBA
IEA
ISO
GO_REF:0000033
GO_REF:0000118
GO_REF:0000107
(PMID:1371749)
GO_REF:0000002
GO_Central
TreeGrafter
Ensembl
RGD
InterPro
PMID:1371749 PMID:2295639 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118, RGD:631761 NCBI chr10:85,412,045...85,464,253
Ensembl chr10:85,412,049...85,463,320
JBrowse link
G Acss1 acyl-CoA synthetase short-chain family member 1 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:16788062)
(PMID:11150295)
GO_REF:0000033
RGD
GO_Central
PMID:11150295 PMID:16788062 GO_REF:0000033 NCBI chr 3:139,450,383...139,500,325
Ensembl chr 3:139,450,383...139,500,325
JBrowse link
G Acss2 acyl-CoA synthetase short-chain family member 2 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:11150295)
GO_Central
RGD
PMID:11150295 GO_REF:0000033 NCBI chr 3:144,003,808...144,047,452
Ensembl chr 3:144,004,336...144,059,675
JBrowse link
G Dip2a disco-interacting protein 2 homolog A involved_in ISO (MGI:6478983|PMID:30672040) RGD PMID:30672040 MGI:6478983 NCBI chr20:12,284,566...12,371,068
Ensembl chr20:12,284,654...12,370,217
JBrowse link
G Mlycd malonyl-CoA decarboxylase involved_in IDA
IBA
IEA
ISO
GO_REF:0000033
GO_REF:0000041
(PMID:10417274), (PMID:10455107), (PMID:9869665)
GO_Central
UniProt
RGD
PMID:9869665 PMID:10417274 PMID:10455107 PMID:17316539 GO_REF:0000033 GO_REF:0000041, RGD:1600790 NCBI chr19:47,447,931...47,463,794
Ensembl chr19:47,447,970...47,463,793
JBrowse link
G Ppcs phosphopantothenoylcysteine synthetase involved_in ISO (PMID:29754768) RGD PMID:29754768 NCBI chr 5:133,023,077...133,026,899
Ensembl chr 5:133,023,121...133,026,933
JBrowse link
acetyl-CoA biosynthetic process from acetate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acss1 acyl-CoA synthetase short-chain family member 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:139,450,383...139,500,325
Ensembl chr 3:139,450,383...139,500,325
JBrowse link
acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlat dihydrolipoamide S-acetyltransferase involved_in IDA
ISO
IBA
IEA
MGI:2386703 (PMID:17314311), (PMID:27621431)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000002
(PMID:24534072)
RGD
GO_Central
TreeGrafter
InterPro
PMID:17314311 PMID:24534072 PMID:27621431 PMID:7487891 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118, RGD:1599112 NCBI chr 8:50,979,151...51,004,435
Ensembl chr 8:50,978,051...51,004,479
JBrowse link
G Dld dihydrolipoamide dehydrogenase involved_in IDA
ISO
MGI:2386703 (PMID:17314311), (PMID:27621431)
(PMID:24534072)
RGD PMID:17314311 PMID:24534072 PMID:27621431 PMID:7487891 RGD:1599112 NCBI chr 6:47,904,153...47,924,814
Ensembl chr 6:47,903,914...47,924,795
JBrowse link
G Mpc1 mitochondrial pyruvate carrier 1 acts_upstream_of_or_within
involved_in
ISO (PMID:22628558) RGD PMID:22628558 NCBI chr 1:52,437,745...52,449,399
Ensembl chr 1:52,437,741...52,449,400
JBrowse link
G Mpc2 mitochondrial pyruvate carrier 2 involved_in
acts_upstream_of_or_within
ISO (PMID:22628558)
MGI:5635078 (PMID:22628558), (PMID:24910426)
RGD PMID:22628558 PMID:24910426 NCBI chr13:77,728,176...77,747,664
Ensembl chr13:77,728,250...77,747,664
JBrowse link
G Pdha1 pyruvate dehydrogenase E1 subunit alpha 1 acts_upstream_of_or_within
involved_in
IDA
ISO
IBA
IEA
MGI:2182095|MGI:2386703 (PMID:18586888)
GO_REF:0000033
GO_REF:0000118
GO_REF:0000114
(PMID:19081061), (PMID:24534072)
GO_REF:0000002
RGD
GO_Central
TreeGrafter
ComplexPortal
InterPro
PMID:18586888 PMID:19081061 PMID:24534072 PMID:7487891 GO_REF:0000002 GO_REF:0000033 GO_REF:0000114 GO_REF:0000118, RGD:1599112 NCBI chr  X:34,700,481...34,714,309
Ensembl chr  X:34,700,409...34,714,311
JBrowse link
G Pdha1l1 pyruvate dehydrogenase (lipoamide) alpha 1-like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr16:82,511,483...82,514,378
Ensembl chr16:82,511,511...82,514,372
JBrowse link
G Pdha2 pyruvate dehydrogenase E1 subunit alpha 2 involved_in IDA
IBA
GO_REF:0000033 GO_Central
RGD
PMID:7487891 GO_REF:0000033, RGD:1599112 NCBI chr 2:229,872,300...229,873,848 JBrowse link
G Pdhb pyruvate dehydrogenase E1 subunit beta involved_in IDA
IBA
IEA
ISO
GO_REF:0000033
GO_REF:0000118
GO_REF:0000114
GO_REF:0000002
(PMID:19081061), (PMID:24534072)
GO_REF:0000107
GO_Central
TreeGrafter
ComplexPortal
InterPro
RGD
Ensembl
PMID:19081061 PMID:24534072 PMID:7487891 GO_REF:0000002 GO_REF:0000033 GO_REF:0000107 GO_REF:0000114 GO_REF:0000118, RGD:1599112 NCBI chr15:16,752,561...16,758,503
Ensembl chr15:16,750,980...16,758,500
JBrowse link
G Pdhx pyruvate dehydrogenase complex, component X involved_in ISO (PMID:24534072) RGD PMID:24534072 NCBI chr 3:89,372,248...89,431,779
Ensembl chr 3:89,371,497...89,431,773
JBrowse link
G Pdk4 pyruvate dehydrogenase kinase 4 TAS RGD PMID:12435272 RGD:729541 NCBI chr 4:33,591,796...33,601,798
Ensembl chr 4:33,589,799...33,601,850
JBrowse link
chondroitin sulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07047835.1 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 Ensembl chr 5:48,925,362...48,927,475 JBrowse link
G B4galnt3 beta-1,4-N-acetyl-galactosaminyl transferase 3 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 4:153,409,019...153,509,019
Ensembl chr 4:153,409,004...153,509,321
JBrowse link
G B4galnt4 beta-1,4-N-acetyl-galactosaminyl transferase 4 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 1:196,171,394...196,182,294
Ensembl chr 1:196,171,394...196,182,294
JBrowse link
G Chpf chondroitin polymerizing factor involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:12761225)
MGI:2681120|MGI:5464019 (PMID:22952769), (PMID:22952873)
MGI:1926173|MGI:2681120 (PMID:17253960), (PMID:22952769)
GO_REF:0000033
RGD
GO_Central
PMID:12761225 PMID:17253960 PMID:22952769 PMID:22952873 GO_REF:0000033 NCBI chr 9:76,963,178...76,967,878
Ensembl chr 9:76,963,184...76,967,878
JBrowse link
G Chpf2 chondroitin polymerizing factor 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 4:10,578,470...10,585,940
Ensembl chr 4:10,580,462...10,585,916
JBrowse link
G Chst11 carbohydrate sulfotransferase 11 involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:11056388)
MGI:1926002 (PMID:10722746), (PMID:21138417)
GO_REF:0000107
RGD
Ensembl
PMID:10722746 PMID:11056388 PMID:21138417 GO_REF:0000107 NCBI chr 7:20,524,535...20,743,008
Ensembl chr 7:20,528,100...20,743,111
JBrowse link
G Chst12 carbohydrate sulfotransferase 12 involved_in ISO (PMID:10781601) RGD PMID:10781601 NCBI chr12:14,110,631...14,129,099
Ensembl chr12:14,110,393...14,129,057
JBrowse link
G Chst13 carbohydrate sulfotransferase 13 involved_in ISO (PMID:12080076) RGD PMID:12080076 NCBI chr 4:122,824,022...122,837,940
Ensembl chr 4:122,824,022...122,838,019
JBrowse link
G Chst3 carbohydrate sulfotransferase 3 acts_upstream_of_or_within
involved_in
IDA
ISO
IBA
IEA
ISS
MGI:2176247 (PMID:11696535), (PMID:9597547)
(PMID:9597547)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
(PMID:15215498), (PMID:9883891)
RGD
GO_Central
Ensembl
UniProt
PMID:9597547 PMID:9883891 PMID:11696535 PMID:15215498 PMID:16495484 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107, RGD:1600854 NCBI chr20:28,114,386...28,152,046
Ensembl chr20:28,114,404...28,121,807
JBrowse link
G Chst7 carbohydrate sulfotransferase 7 involved_in ISO
IBA
(PMID:10781596)
GO_REF:0000033
RGD
GO_Central
PMID:10781596 GO_REF:0000033 NCBI chr  X:2,396,260...2,432,828
Ensembl chr  X:2,393,874...2,432,840
JBrowse link
G Chsy1 chondroitin sulfate synthase 1 acts_upstream_of_or_within
involved_in
ISO
IBA
(PMID:11514575)
MGI:106576 (PMID:22952769)
GO_REF:0000033
RGD
GO_Central
PMID:11514575 PMID:22952769 GO_REF:0000033 NCBI chr 1:119,689,626...119,750,711
Ensembl chr 1:119,686,350...119,750,601
JBrowse link
G Chsy3 chondroitin sulfate synthase 3 involved_in IBA
ISO
GO_REF:0000033
MGI:106576 (PMID:17253960)
GO_Central
RGD
PMID:17253960 GO_REF:0000033 NCBI chr18:52,644,356...52,901,257
Ensembl chr18:52,644,461...52,898,098
JBrowse link
G Csgalnact1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 involved_in ISO
IBA
(PMID:11514575), (PMID:12163485)
MGI:1926002|MGI:4868209 (PMID:17145758), (PMID:25568321), (PMID:29287114)
GO_REF:0000033
RGD
GO_Central
PMID:11514575 PMID:12163485 PMID:17145758 PMID:25568321 PMID:29287114 GO_REF:0000033 NCBI chr16:20,995,210...21,330,586
Ensembl chr16:21,235,784...21,330,319
JBrowse link
G Csgalnact2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 involved_in IBA
ISO
GO_REF:0000033
(PMID:25568321)
GO_Central
RGD
PMID:25568321 GO_REF:0000033 NCBI chr 4:151,271,774...151,308,856
Ensembl chr 4:151,277,645...151,308,839
JBrowse link
G Slc35b2 solute carrier family 35 member B2 involved_in ISO (PMID:35325049) RGD PMID:35325049 NCBI chr 9:15,438,594...15,442,227
Ensembl chr 9:15,438,594...15,442,234
JBrowse link
G Slc35d1 solute carrier family 35 member D1 acts_upstream_of_or_within ISO MGI:3774133 (PMID:17952091) RGD PMID:17952091 NCBI chr 5:117,928,628...117,981,289
Ensembl chr 5:117,934,352...117,981,311
JBrowse link
G Ugdh UDP-glucose 6-dehydrogenase involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:2675908|PMID:14505572)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:14505572 GO_REF:0000024 GO_REF:0000107 MGI:2675908 NCBI chr14:42,848,704...42,872,351
Ensembl chr14:42,848,854...42,872,354
JBrowse link
G Xylt1 xylosyltransferase 1 involved_in IEA
ISO
GO_REF:0000041
(MGI:5544658|PMID:24161523)
UniProt
RGD
PMID:24161523 GO_REF:0000041 MGI:5544658 NCBI chr 1:171,643,925...171,929,774
Ensembl chr 1:171,643,925...171,926,783
JBrowse link
G Xylt2 xylosyltransferase 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr10:79,605,910...79,619,482
Ensembl chr10:79,606,007...79,619,391
JBrowse link
cysteine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta synthase involved_in
acts_upstream_of_or_within
ISO (PMID:24416422)
MGI:1857139 (PMID:15030387)
RGD PMID:15030387 PMID:24416422 NCBI chr20:9,708,089...9,732,623
Ensembl chr20:9,708,090...9,732,764
JBrowse link
G Cth cystathionine gamma-lyase involved_in IEA
ISS
ISO
GO_REF:0000041
GO_REF:0000024
(PMID:10212249)
UniProt
RGD
PMID:10212249 GO_REF:0000024 GO_REF:0000041 NCBI chr 2:246,975,888...247,002,234
Ensembl chr 2:246,975,894...247,002,234
JBrowse link
G Ggt1 gamma-glutamyltransferase 1 involved_in ISO
IEA
(MGI:5294309|PMID:12468440)
GO_REF:0000107
RGD
Ensembl
PMID:12468440 GO_REF:0000107 MGI:5294309 NCBI chr20:13,074,695...13,104,095
Ensembl chr20:13,074,700...13,108,442
JBrowse link
cysteine biosynthetic process from serine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta synthase involved_in IEA
IBA
GO_REF:0000104
GO_REF:0000033
UniProt
GO_Central
GO_REF:0000033 GO_REF:0000104 NCBI chr20:9,708,089...9,732,623
Ensembl chr20:9,708,090...9,732,764
JBrowse link
cysteine biosynthetic process via cystathionine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta synthase involved_in IEA GO_REF:0000002
GO_REF:0000104
InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 NCBI chr20:9,708,089...9,732,623
Ensembl chr20:9,708,090...9,732,764
JBrowse link
G Cth cystathionine gamma-lyase involved_in ISO
IBA
IEA
(PMID:19428278)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:19428278 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:246,975,888...247,002,234
Ensembl chr 2:246,975,894...247,002,234
JBrowse link
dermatan sulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chst12 carbohydrate sulfotransferase 12 involved_in ISO (PMID:10781601) RGD PMID:10781601 NCBI chr12:14,110,631...14,129,099
Ensembl chr12:14,110,393...14,129,057
JBrowse link
G Chst14 carbohydrate sulfotransferase 14 acts_upstream_of_or_within ISO (PMID:11470797) RGD PMID:11470797 NCBI chr 3:105,916,481...105,918,538
Ensembl chr 3:105,916,466...105,918,548
JBrowse link
G Dse dermatan sulfate epimerase involved_in ISO (PMID:16505484) RGD PMID:16505484 NCBI chr20:26,118,194...26,196,889
Ensembl chr20:26,118,196...26,196,992
JBrowse link
fatty-acyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gcdh glutaryl-CoA dehydrogenase involved_in IDA
IBA
GO_REF:0000033 GO_Central
RGD
PMID:6895440 GO_REF:0000033, RGD:1598697 NCBI chr19:23,263,215...23,269,689
Ensembl chr19:23,263,264...23,269,681
JBrowse link
glutathione biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gclc glutamate-cysteine ligase, catalytic subunit acts_upstream_of_or_within
involved_in
IMP
ISO
IBA
IEA
ISS
MGI:2387010 (PMID:10805773), (PMID:16081425)
GO_REF:0000033
GO_REF:0000041
(PMID:10395918), (PMID:12663448), (PMID:8104187), (PMID:9675072)
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:8104187 PMID:9675072 PMID:10395918 PMID:10805773 PMID:12663448 More... GO_REF:0000024 GO_REF:0000033 GO_REF:0000041, RGD:1582661 NCBI chr 8:78,629,899...78,668,547
Ensembl chr 8:78,630,127...78,668,544
JBrowse link
G Gclm glutamate cysteine ligase, modifier subunit acts_upstream_of_or_within
involved_in
IMP
ISO
IBA
IEA
ISS
(PMID:16081425)
GO_REF:0000033
GO_REF:0000041
(PMID:10395918), (PMID:12081989), (PMID:9675072)
GO_REF:0000024
RGD
GO_Central
UniProt
PMID:9675072 PMID:10395918 PMID:12081989 PMID:16081425 PMID:16183645 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041, RGD:1582661 NCBI chr 2:210,347,482...210,367,537
Ensembl chr 2:210,347,482...210,367,535
JBrowse link
G Ggt1 gamma-glutamyltransferase 1 involved_in ISO
IEA
(MGI:5294309|PMID:12468440)
GO_REF:0000107
RGD
Ensembl
PMID:12468440 GO_REF:0000107 MGI:5294309 NCBI chr20:13,074,695...13,104,095
Ensembl chr20:13,074,700...13,108,442
JBrowse link
G Ggt5 gamma-glutamyltransferase 5 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr20:13,043,255...13,071,523
Ensembl chr20:13,043,257...13,071,450
JBrowse link
G Ggt6 gamma-glutamyl transferase 6 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr10:57,051,977...57,054,900
Ensembl chr10:57,051,825...57,067,260
JBrowse link
G Ggt7 gamma-glutamyltransferase 7 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 3:143,978,073...144,004,597
Ensembl chr 3:143,978,082...144,001,492
JBrowse link
G Gss glutathione synthetase acts_upstream_of_or_within
involved_in
IDA
ISO
IEA
(MGI:81780|PMID:8660701)
GO_REF:0000041
RGD
UniProt
PMID:8660701 PMID:10964706 GO_REF:0000041 MGI:81780, RGD:1599340 NCBI chr 3:144,047,849...144,078,197
Ensembl chr 3:144,047,850...144,078,198
JBrowse link
G Hagh hydroxyacyl glutathione hydrolase involved_in IEA
ISO
GO_REF:0000107
(PMID:8550579)
Ensembl
RGD
PMID:8550579 GO_REF:0000107 NCBI chr10:13,874,883...13,889,527
Ensembl chr10:13,875,241...13,889,504
JBrowse link
G Mgst2 microsomal glutathione S-transferase 2 involved_in ISO (PMID:8703034) RGD PMID:8703034 NCBI chr 2:135,679,524...135,715,828
Ensembl chr 2:135,693,557...135,715,828
JBrowse link
G Slc1a1 solute carrier family 1 member 1 involved_in ISO (PMID:12614333) RGD PMID:12614333 NCBI chr 1:226,549,932...226,631,925
Ensembl chr 1:226,549,842...226,630,402
JBrowse link
G Slc1a2 solute carrier family 1 member 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:12614333)
Ensembl
RGD
PMID:12614333 GO_REF:0000107 NCBI chr 3:89,005,129...89,135,469
Ensembl chr 3:89,005,129...89,126,498
JBrowse link
glutathione derivative biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gsta1 glutathione S-transferase alpha 1 involved_in ISO (PMID:9084911) RGD PMID:9084911 NCBI chr 9:23,703,476...23,720,121
Ensembl chr 9:23,703,477...23,720,121
JBrowse link
G Gsta2 glutathione S-transferase alpha 2 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 8:79,184,535...79,196,827
Ensembl chr 8:79,184,322...79,196,798
JBrowse link
G Gstm1 glutathione S-transferase mu 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:9084911)
UniProt
RGD
PMID:9084911 GO_REF:0000024 NCBI chr 2:195,649,845...195,655,402
Ensembl chr 2:195,649,845...195,655,411
JBrowse link
G Gstp1 glutathione S-transferase pi 1 involved_in ISO
ISS
(PMID:9084911)
GO_REF:0000024
RGD
UniProt
PMID:9084911 GO_REF:0000024 NCBI chr 1:201,337,762...201,340,230
Ensembl chr 1:201,321,672...201,340,226
JBrowse link
heparan sulfate proteoglycan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3gat3 beta-1,3-glucuronyltransferase 3 involved_in
acts_upstream_of_or_within
ISO (PMID:25893793)
(PMID:21763480)
RGD PMID:21763480 PMID:25893793 NCBI chr 1:205,817,374...205,823,928
Ensembl chr 1:205,817,378...205,837,807
JBrowse link
G Ext1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:10639137), (PMID:9620772)
(MGI:3687782|PMID:10639137), (PMID:10639137), (PMID:30377379)
(PMID:20080592), (PMID:29415886)
RGD PMID:9620772 PMID:10639137 PMID:20080592 PMID:29415886 PMID:30377379 MGI:3687782 NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
JBrowse link
G Ext2 exostosin glycosyltransferase 2 involved_in
acts_upstream_of_or_within
ISO (PMID:17761672)
MGI:894663 (PMID:10639137)
MGI:3608690 (PMID:16236767)
RGD PMID:10639137 PMID:16236767 PMID:17761672 NCBI chr 3:79,665,414...79,798,077
Ensembl chr 3:79,665,415...79,798,059
JBrowse link
G Extl1 exostosin-like glycosyltransferase 1 involved_in ISO (PMID:11390981) RGD PMID:11390981 NCBI chr 5:146,573,911...146,589,115
Ensembl chr 5:146,573,912...146,589,115
JBrowse link
G Extl3 exostosin-like glycosyltransferase 3 involved_in ISO (PMID:11390981), (PMID:28132690), (PMID:28148688), (PMID:35676258)
(MGI:3844390|PMID:19336225)
RGD PMID:11390981 PMID:19336225 PMID:28132690 PMID:28148688 PMID:35676258 MGI:3844390 NCBI chr15:39,294,033...39,384,086
Ensembl chr15:39,293,605...39,338,898
JBrowse link
G Glce glucuronic acid epimerase involved_in ISO
IBA
(PMID:20118238), (PMID:30872481)
(PMID:11279150), (PMID:30377379)
GO_REF:0000033
RGD
GO_Central
PMID:11279150 PMID:20118238 PMID:30377379 PMID:30872481 GO_REF:0000033 NCBI chr 8:62,546,104...62,612,144
Ensembl chr 8:62,546,107...62,612,040
JBrowse link
G Hs2st1 heparan sulfate 2-O-sulfotransferase 1 involved_in ISO MGI:4439258 (PMID:19889634), (PMID:30377379) RGD PMID:19889634 PMID:30377379 NCBI chr 2:233,508,018...233,641,769
Ensembl chr 2:233,508,021...233,641,769
JBrowse link
G Hs3st1 heparan sulfate-glucosamine 3-sulfotransferase 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:24247246), (PMID:30377379), (PMID:9346953)
Ensembl
RGD
PMID:9346953 PMID:24247246 PMID:30377379 GO_REF:0000107 NCBI chr14:71,185,826...71,223,263
Ensembl chr14:71,185,682...71,223,248
JBrowse link
G Hs3st2 heparan sulfate-glucosamine 3-sulfotransferase 2 involved_in ISO MGI:5566804 (PMID:26731579) RGD PMID:26731579 NCBI chr 1:175,956,161...176,077,400
Ensembl chr 1:175,956,157...176,077,399
JBrowse link
G Hs3st3a1 heparan sulfate-glucosamine 3-sulfotransferase 3A1 involved_in ISO MGI:5312610 (PMID:34653670) RGD PMID:34653670 NCBI chr10:49,092,850...49,180,676
Ensembl chr10:49,094,026...49,180,676
JBrowse link
G Hs3st3b1 heparan sulfate-glucosamine 3-sulfotransferase 3B1 involved_in ISO (PMID:10520990) RGD PMID:10520990 NCBI chr10:48,561,473...48,593,970
Ensembl chr10:48,561,473...48,593,970
JBrowse link
G Hs3st4 heparan sulfate-glucosamine 3-sulfotransferase 4 involved_in ISO (PMID:30377379) RGD PMID:30377379 NCBI chr 1:178,539,078...178,944,850
Ensembl chr 1:178,539,093...178,944,107
JBrowse link
G Hs3st6 heparan sulfate-glucosamine 3-sulfotransferase 6 involved_in ISO (PMID:15303968) RGD PMID:15303968 NCBI chr10:13,781,999...13,788,133
Ensembl chr10:13,781,993...13,788,133
JBrowse link
G Hs6st1 heparan sulfate 6-O-sulfotransferase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:12611590), (PMID:15226404), (PMID:30377379)
MGI:3715259 (PMID:17405882)
RGD PMID:12611590 PMID:15226404 PMID:17405882 PMID:30377379 NCBI chr 9:38,283,502...38,322,684
Ensembl chr 9:38,282,395...38,322,683
JBrowse link
G Hs6st2 heparan sulfate 6-O-sulfotransferase 2 involved_in ISO (PMID:12611590), (PMID:15226404), (PMID:30377379) RGD PMID:12611590 PMID:15226404 PMID:30377379 NCBI chr  X:130,966,547...131,261,629
Ensembl chr  X:130,968,385...131,261,492
JBrowse link
G Hs6st3 heparan sulfate 6-O-sulfotransferase 3 involved_in ISO (PMID:12611590), (PMID:15226404) RGD PMID:12611590 PMID:15226404 NCBI chr15:96,281,502...97,000,804
Ensembl chr15:96,281,646...97,000,462
JBrowse link
G Lipc lipase C, hepatic type IDA RGD PMID:15102889 RGD:1580511 NCBI chr 8:71,509,633...71,635,663
Ensembl chr 8:71,509,635...71,635,464
JBrowse link
G Ndst1 N-deacetylase and N-sulfotransferase 1 involved_in IMP
ISO
PMID:9915799
MGI:3589211|MGI:3589383 (PMID:18385133), (PMID:18487608), (PMID:23846497), (PMID:30377379)
RGD PMID:18385133 PMID:18487608 PMID:23846497 PMID:30377379 PMID:9915799 RGD:12907548 NCBI chr18:54,136,887...54,199,545
Ensembl chr18:54,140,779...54,178,191
JBrowse link
G Ndst2 N-deacetylase and N-sulfotransferase 2 involved_in
acts_upstream_of_or_within
ISO (PMID:18487608), (PMID:27387504), (PMID:30377379), (PMID:8294485)
MGI:1913285 (PMID:10466727)
RGD PMID:8294485 PMID:10466727 PMID:18487608 PMID:27387504 PMID:30377379 NCBI chr15:3,563,515...3,573,801
Ensembl chr15:3,563,358...3,573,801
JBrowse link
G Ndst3 N-deacetylase and N-sulfotransferase 3 involved_in ISO (PMID:9915799)
MGI:3806156 (PMID:18385133)
RGD PMID:9915799 PMID:18385133 NCBI chr 2:211,702,728...211,868,159
Ensembl chr 2:211,704,898...211,854,584
JBrowse link
G Slc35d2 solute carrier family 35 member D2 acts_upstream_of_positive_effect ISO (PMID:15082721) RGD PMID:15082721 NCBI chr17:987,899...1,019,747
Ensembl chr17:988,157...1,019,743
JBrowse link
G Ugdh UDP-glucose 6-dehydrogenase involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:2675908|PMID:14505572)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:14505572 GO_REF:0000024 GO_REF:0000107 MGI:2675908 NCBI chr14:42,848,704...42,872,351
Ensembl chr14:42,848,854...42,872,354
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 acts_upstream_of_or_within ISO MGI:1857642 (PMID:23760952) RGD PMID:23760952 NCBI chr13:84,462,731...84,489,404
Ensembl chr13:84,465,527...84,489,378
JBrowse link
G Xylt1 xylosyltransferase 1 involved_in IEA
IBA
ISS
ISO
GO_REF:0000041
GO_REF:0000033
GO_REF:0000024
(PMID:17189265)
UniProt
GO_Central
RGD
PMID:17189265 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 NCBI chr 1:171,643,925...171,929,774
Ensembl chr 1:171,643,925...171,926,783
JBrowse link
G Xylt2 xylosyltransferase 2 involved_in ISS
IBA
IEA
ISO
GO_REF:0000024
GO_REF:0000033
GO_REF:0000041
(PMID:17189265), (PMID:26027496)
UniProt
GO_Central
RGD
PMID:17189265 PMID:26027496 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 NCBI chr10:79,605,910...79,619,482
Ensembl chr10:79,606,007...79,619,391
JBrowse link
heparan sulfate proteoglycan biosynthetic process, enzymatic modification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hs2st1 heparan sulfate 2-O-sulfotransferase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:233,508,018...233,641,769
Ensembl chr 2:233,508,021...233,641,769
JBrowse link
G Hs3st5 heparan sulfate-glucosamine 3-sulfotransferase 5 involved_in ISO (PMID:12138164) RGD PMID:12138164 NCBI chr20:40,106,876...40,417,661
Ensembl chr20:40,106,876...40,417,653
JBrowse link
G Hs6st1 heparan sulfate 6-O-sulfotransferase 1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
(PMID:10644753)
GO_Central
RGD
PMID:10644753 GO_REF:0000033 NCBI chr 9:38,283,502...38,322,684
Ensembl chr 9:38,282,395...38,322,683
JBrowse link
G Hs6st2 heparan sulfate 6-O-sulfotransferase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:130,966,547...131,261,629
Ensembl chr  X:130,968,385...131,261,492
JBrowse link
G Hs6st3 heparan sulfate 6-O-sulfotransferase 3 acts_upstream_of_or_within ISO (PMID:10644753) RGD PMID:10644753 NCBI chr15:96,281,502...97,000,804
Ensembl chr15:96,281,646...97,000,462
JBrowse link
heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ext1 exostosin glycosyltransferase 1 involved_in ISO (PMID:17761672), (PMID:36593275) RGD PMID:17761672 PMID:36593275 NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
JBrowse link
G Ext2 exostosin glycosyltransferase 2 involved_in ISO (PMID:17761672), (PMID:36593275) RGD PMID:17761672 PMID:36593275 NCBI chr 3:79,665,414...79,798,077
Ensembl chr 3:79,665,415...79,798,059
JBrowse link
G Hs2st1 heparan sulfate 2-O-sulfotransferase 1 involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:1934916 (PMID:11457822)
GO_Central
RGD
PMID:11457822 GO_REF:0000033 NCBI chr 2:233,508,018...233,641,769
Ensembl chr 2:233,508,021...233,641,769
JBrowse link
G Ndst1 N-deacetylase and N-sulfotransferase 1 involved_in IDA
IBA
ISO
PMID:1379236
GO_REF:0000033
(MGI:6870964|PMID:10758005)
PMID:8483907
GO_Central
RGD
PMID:10758005 PMID:1379236 PMID:8483907 GO_REF:0000033 MGI:6870964, RGD:68801, RGD:151356652 NCBI chr18:54,136,887...54,199,545
Ensembl chr18:54,140,779...54,178,191
JBrowse link
G Ndst2 N-deacetylase and N-sulfotransferase 2 involved_in ISO
IBA
(MGI:6870964|PMID:10758005)
GO_REF:0000033
RGD
GO_Central
PMID:10758005 GO_REF:0000033 MGI:6870964 NCBI chr15:3,563,515...3,573,801
Ensembl chr15:3,563,358...3,573,801
JBrowse link
G Ndst3 N-deacetylase and N-sulfotransferase 3 involved_in ISO
IBA
(PMID:9915799)
GO_REF:0000033
RGD
GO_Central
PMID:9915799 GO_REF:0000033 NCBI chr 2:211,702,728...211,868,159
Ensembl chr 2:211,704,898...211,854,584
JBrowse link
G Ndst4 N-deacetylase and N-sulfotransferase 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:213,787,010...214,119,514
Ensembl chr 2:213,787,006...214,115,373
JBrowse link
heparin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angpt1 angiopoietin 1 involved_in ISO
IEA
(PMID:19297368)
GO_REF:0000107
RGD
Ensembl
PMID:19297368 GO_REF:0000107 NCBI chr 7:73,528,345...73,783,953
Ensembl chr 7:73,531,486...73,784,067
JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within
acts_upstream_of_or_within_positive_effect
ISO MGI:108050 (PMID:21148566), (PMID:21310272)
(PMID:10926768), (PMID:15161920), (PMID:15177029), (PMID:18480751)
RGD PMID:10926768 PMID:15161920 PMID:15177029 PMID:18480751 PMID:21148566 More... NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
JBrowse link
G Ext2 exostosin glycosyltransferase 2 acts_upstream_of_or_within ISO MGI:894663 (PMID:21310272) RGD PMID:21310272 NCBI chr 3:79,665,414...79,798,077
Ensembl chr 3:79,665,415...79,798,059
JBrowse link
G Glce glucuronic acid epimerase involved_in IEA
ISO
GO_REF:0000041
(MGI:2135754|PMID:11279150)
UniProt
RGD
PMID:11279150 GO_REF:0000041 MGI:2135754 NCBI chr 8:62,546,104...62,612,144
Ensembl chr 8:62,546,107...62,612,040
JBrowse link
G Ndst1 N-deacetylase and N-sulfotransferase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr18:54,136,887...54,199,545
Ensembl chr18:54,140,779...54,178,191
JBrowse link
G Ndst2 N-deacetylase and N-sulfotransferase 2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr15:3,563,515...3,573,801
Ensembl chr15:3,563,358...3,573,801
JBrowse link
G Ndst3 N-deacetylase and N-sulfotransferase 3 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:211,702,728...211,868,159
Ensembl chr 2:211,704,898...211,854,584
JBrowse link
G Ndst4 N-deacetylase and N-sulfotransferase 4 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:213,787,010...214,119,514
Ensembl chr 2:213,787,006...214,115,373
JBrowse link
G Slc10a7 solute carrier family 10, member 7 involved_in ISO (PMID:30082715)
(MGI:6198941|PMID:30082715)
RGD PMID:30082715 MGI:6198941 NCBI chr19:29,183,143...29,407,470
Ensembl chr19:29,183,155...29,407,464
JBrowse link
G Xylt2 xylosyltransferase 2 acts_upstream_of_or_within ISO MGI:3714171 (PMID:17517600) RGD PMID:17517600 NCBI chr10:79,605,910...79,619,482
Ensembl chr10:79,606,007...79,619,391
JBrowse link
hydrogen sulfide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbs cystathionine beta synthase involved_in ISO
IDA
(PMID:15520012), (PMID:24416422)
PMID:20149843
RGD PMID:15520012 PMID:24416422 PMID:20149843 RGD:8554341 NCBI chr20:9,708,089...9,732,623
Ensembl chr20:9,708,090...9,732,764
JBrowse link
G Cth cystathionine gamma-lyase involved_in ISO
IEA
ISS
(PMID:19019829)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:19019829 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:246,975,888...247,002,234
Ensembl chr 2:246,975,894...247,002,234
JBrowse link
G Mpst mercaptopyruvate sulfurtransferase involved_in ISS
ISO
GO_REF:0000024
(MGI:5487538|PMID:18855522), (MGI:6120294|PMID:28079151)
UniProt
RGD
PMID:18855522 PMID:28079151 GO_REF:0000024 MGI:5487538 MGI:6120294 NCBI chr 7:109,955,581...109,963,155
Ensembl chr 7:109,955,675...109,963,141
JBrowse link
keratan sulfate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3gnt7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 involved_in ISO
ISS
(PMID:17690104)
(MGI:6151274|PMID:29625490)
GO_REF:0000024
RGD
UniProt
PMID:17690104 PMID:29625490 GO_REF:0000024 MGI:6151274 NCBI chr 9:86,956,220...86,960,171
Ensembl chr 9:86,956,220...86,960,170
JBrowse link
G B4galt4 beta-1,4-galactosyltransferase 4 involved_in ISO
ISS
(PMID:17690104), (PMID:32827291)
GO_REF:0000024
RGD
UniProt
PMID:17690104 PMID:32827291 GO_REF:0000024 NCBI chr11:61,995,807...62,021,751
Ensembl chr11:61,995,814...62,021,671
JBrowse link
G Chst1 carbohydrate sulfotransferase 1 involved_in ISO
ISS
(PMID:17690104)
GO_REF:0000024
RGD
UniProt
PMID:17690104 GO_REF:0000024 NCBI chr 3:78,552,059...78,574,740
Ensembl chr 3:78,548,525...78,574,883
JBrowse link
G Chst4 carbohydrate sulfotransferase 4 involved_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr19:37,993,471...38,002,123
Ensembl chr19:37,991,417...38,003,608
JBrowse link
G Chst5 carbohydrate sulfotransferase 5 involved_in ISO
IBA
(MGI:1934540|PMID:11278593)
GO_REF:0000033
(PMID:11278593), (PMID:17690104)
RGD
GO_Central
PMID:11278593 PMID:17690104 GO_REF:0000033 MGI:1934540 NCBI chr19:39,860,729...39,881,019
Ensembl chr19:39,860,501...39,881,064
JBrowse link
L-methionine salvage term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhmt betaine-homocysteine S-methyltransferase involved_in ISO
IBA
IEA
(PMID:18230605)
GO_REF:0000033
GO_REF:0000107
RGD
GO_Central
Ensembl
PMID:18230605 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:24,859,871...24,879,449
Ensembl chr 2:24,859,873...24,879,742
JBrowse link
G Bhmt2 betaine-homocysteine S-methyltransferase 2 involved_in IEA
IBA
ISO
GO_REF:0000107
GO_REF:0000118
GO_REF:0000033
(PMID:18230605)
Ensembl
TreeGrafter
GO_Central
RGD
PMID:18230605 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr 2:24,895,525...24,912,475
Ensembl chr 2:24,895,533...24,912,475
JBrowse link
L-methionine salvage from methylthioadenosine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adi1 acireductone dioxygenase 1 involved_in IEA
ISS
ISO
GO_REF:0000041
GO_REF:0000024
(PMID:15938715)
UniProt
RGD
PMID:15938715 GO_REF:0000024 GO_REF:0000041 NCBI chr 6:45,306,885...45,313,847
Ensembl chr 6:45,306,841...45,313,842
JBrowse link
G Apip APAF1 interacting protein involved_in IEA
IBA
ISO
GO_REF:0000041
GO_REF:0000033
(PMID:22837397), (PMID:23285211)
UniProt
GO_Central
RGD
PMID:22837397 PMID:23285211 GO_REF:0000033 GO_REF:0000041 NCBI chr 3:89,431,964...89,458,000
Ensembl chr 3:89,432,037...89,458,340
JBrowse link
G Enoph1 enolase-phosphatase 1 involved_in IEA
IBA
ISO
ISS
GO_REF:0000041
GO_REF:0000033
(PMID:15843022)
GO_REF:0000024
UniProt
GO_Central
RGD
PMID:15843022 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 NCBI chr14:9,531,336...9,557,797
Ensembl chr14:9,531,339...9,569,273
JBrowse link
G Mri1 methylthioribose-1-phosphate isomerase 1 involved_in IEA
IBA
GO_REF:0000041
GO_REF:0000033
UniProt
GO_Central
GO_REF:0000033 GO_REF:0000041 NCBI chr19:23,907,327...23,913,721
Ensembl chr19:23,907,335...23,913,320
JBrowse link
G Mtap methylthioadenosine phosphorylase involved_in IEA
IBA
GO_REF:0000041
GO_REF:0000033
UniProt
GO_Central
GO_REF:0000033 GO_REF:0000041 NCBI chr 5:103,874,460...103,920,684
Ensembl chr 5:103,873,020...103,939,406
JBrowse link
L-methionine salvage from S-adenosylmethionine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apip APAF1 interacting protein involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 3:89,431,964...89,458,000
Ensembl chr 3:89,432,037...89,458,340
JBrowse link
G Enoph1 enolase-phosphatase 1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr14:9,531,336...9,557,797
Ensembl chr14:9,531,339...9,569,273
JBrowse link
G Mri1 methylthioribose-1-phosphate isomerase 1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr19:23,907,327...23,913,721
Ensembl chr19:23,907,335...23,913,320
JBrowse link
leukotriene D4 biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ggt1 gamma-glutamyltransferase 1 involved_in ISO (PMID:14754911), (PMID:21447318) RGD PMID:14754911 PMID:21447318 NCBI chr20:13,074,695...13,104,095
Ensembl chr20:13,074,700...13,108,442
JBrowse link
G Ggt5 gamma-glutamyltransferase 5 involved_in
acts_upstream_of_or_within
ISO
IBA
IEA
ISS
(PMID:1676842), (PMID:21447318)
MGI:2182354 (PMID:12163373), (PMID:9774450)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
RGD
GO_Central
Ensembl
UniProt
PMID:1676842 PMID:9774450 PMID:12163373 PMID:21447318 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 NCBI chr20:13,043,255...13,071,523
Ensembl chr20:13,043,257...13,071,450
JBrowse link
lipoate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Htd2 hydroxyacyl-thioester dehydratase type 2 acts_upstream_of_or_within ISO (PMID:33774475) RGD PMID:33774475 NCBI chr 2:105,222,958...105,223,419 JBrowse link
G Lias lipoic acid synthetase involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
UniProtKB:P60716 (PMID:11389890)
GO_Central
RGD
PMID:11389890 GO_REF:0000033 NCBI chr14:42,876,699...42,893,824
Ensembl chr14:42,876,699...42,893,783
JBrowse link
long-chain fatty-acyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acsl1 acyl-CoA synthetase long-chain family member 1 involved_in IGI
IBA
GO_REF:0000033 GO_Central
RGD
PMID:16466685 GO_REF:0000033, RGD:2312800 NCBI chr16:45,755,246...45,821,541
Ensembl chr16:45,755,254...45,821,541
JBrowse link
G Acsl4 acyl-CoA synthetase long-chain family member 4 IGI RGD PMID:16466685 RGD:2312800 NCBI chr  X:105,942,794...106,006,573
Ensembl chr  X:105,942,799...106,006,427
JBrowse link
G Acsl5 acyl-CoA synthetase long-chain family member 5 involved_in IGI
IBA
IEA
GO_REF:0000033
GO_REF:0000118
GO_Central
TreeGrafter
RGD
PMID:16466685 GO_REF:0000033 GO_REF:0000118, RGD:2312800 NCBI chr 1:254,289,513...254,336,608
Ensembl chr 1:254,292,521...254,336,607
JBrowse link
G Acsl6 acyl-CoA synthetase long-chain family member 6 involved_in IGI
IBA
GO_REF:0000033 GO_Central
RGD
PMID:16466685 GO_REF:0000033, RGD:2312800 NCBI chr10:38,439,914...38,501,182
Ensembl chr10:38,440,080...38,498,757
JBrowse link
G Elovl1 ELOVL fatty acid elongase 1 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 5:131,961,478...131,965,961
Ensembl chr 5:131,961,322...131,965,958
JBrowse link
G Elovl3 ELOVL fatty acid elongase 3 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 1:244,997,287...245,001,115
Ensembl chr 1:244,997,287...245,001,115
JBrowse link
G Elovl4 ELOVL fatty acid elongase 4 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 8:84,702,916...84,729,466
Ensembl chr 8:84,702,362...84,729,697
JBrowse link
G Elovl5 ELOVL fatty acid elongase 5 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 8:78,790,846...78,857,307
Ensembl chr 8:78,790,846...78,857,284
JBrowse link
G Elovl6 ELOVL fatty acid elongase 6 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 2:218,063,682...218,174,767
Ensembl chr 2:218,063,804...218,171,186
JBrowse link
G Elovl7 ELOVL fatty acid elongase 7 involved_in IEA GO_REF:0000104 UniProt GO_REF:0000104 NCBI chr 2:39,789,229...39,858,579
Ensembl chr 2:39,789,250...39,856,845
JBrowse link
malonyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acaca acetyl-CoA carboxylase alpha involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr10:69,014,261...69,276,453
Ensembl chr10:69,014,170...69,276,457
JBrowse link
G Acacb acetyl-CoA carboxylase beta involved_in IEA
ISO
GO_REF:0000041
(MGI:3804564|PMID:18487439)
UniProt
RGD
PMID:18487439 GO_REF:0000041 MGI:3804564 NCBI chr12:42,365,800...42,477,651
Ensembl chr12:42,366,548...42,457,655
JBrowse link
methionine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bhmt betaine-homocysteine S-methyltransferase acts_upstream_of_or_within IDA
ISO
(PMID:15217352) RGD PMID:15217352 PMID:15845641 RGD:1359026 NCBI chr 2:24,859,871...24,879,449
Ensembl chr 2:24,859,873...24,879,742
JBrowse link
G Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 involved_in ISO
IEA
(PMID:25633902)
GO_REF:0000107
RGD
Ensembl
PMID:25633902 GO_REF:0000107 NCBI chr 6:94,977,862...95,045,375
Ensembl chr 6:94,977,862...95,045,372
JBrowse link
G Mthfd2l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:17,089,947...17,170,036
Ensembl chr14:17,089,952...17,170,112
JBrowse link
G Mthfr methylenetetrahydrofolate reductase involved_in
acts_upstream_of_or_within
IBA
ISO
GO_REF:0000033
MGI:2385823 (PMID:15217352)
GO_Central
RGD
PMID:15217352 GO_REF:0000033 NCBI chr 5:158,465,248...158,484,999
Ensembl chr 5:158,465,296...158,483,797
JBrowse link
G Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase acts_upstream_of_or_within
involved_in
IDA
ISO
IBA
MGI:2180496 (PMID:11158293)
PMID:20424322
GO_REF:0000033
(PMID:23825108)
RGD
GO_Central
PMID:11158293 PMID:23825108 PMID:15845641 PMID:20424322 PMID:11730351 GO_REF:0000033, RGD:1359026, RGD:10054082, RGD:1601423 NCBI chr17:58,219,998...58,308,560
Ensembl chr17:58,220,071...58,304,822
JBrowse link
G Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase involved_in ISO
IBA
IEA
(PMID:11466310)
GO_REF:0000033
GO_REF:0000043
(MGI:3710265|PMID:17369066)
RGD
GO_Central
UniProt
PMID:11466310 PMID:17369066 GO_REF:0000033 GO_REF:0000043 MGI:3710265 NCBI chr 1:34,866,991...34,899,425
Ensembl chr 1:34,867,089...34,899,425
JBrowse link
negative regulation of hydrogen sulfide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir21 microRNA 21 involved_in ISO (PMID:22034194) RGD PMID:22034194 NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348
JBrowse link
positive regulation of glutathione biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 involved_in ISO (MGI:5616326|PMID:14978030) RGD PMID:14978030 MGI:5616326 NCBI chr 4:102,805,495...102,866,914
Ensembl chr 4:102,805,510...102,866,911
JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 involved_in ISO (MGI:5616326|PMID:14978030) RGD PMID:14978030 MGI:5616326 NCBI chr 3:60,594,239...60,621,712
Ensembl chr 3:60,594,242...60,621,737
JBrowse link
positive regulation of heparan sulfate proteoglycan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ctnnb1 catenin beta 1 involved_in ISO
IEA
ISS
(PMID:15853773)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:15853773 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Pxylp1 2-phosphoxylose phosphatase 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:24425863)
UniProt
RGD
PMID:24425863 GO_REF:0000024 NCBI chr 8:97,419,766...97,485,163
Ensembl chr 8:97,419,776...97,485,064
JBrowse link
G Tcf7l2 transcription factor 7 like 2 involved_in ISO (PMID:15853773) RGD PMID:15853773 NCBI chr 1:254,785,956...254,978,967
Ensembl chr 1:254,786,091...254,978,967
JBrowse link
positive regulation of hydrogen sulfide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sp1 Sp1 transcription factor involved_in ISO (PMID:21659522) RGD PMID:21659522 NCBI chr 7:133,541,302...133,571,961
Ensembl chr 7:133,541,491...133,571,961
JBrowse link
propionyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 involved_in ISO (PMID:17371050) RGD PMID:17371050 NCBI chr 8:53,979,813...54,008,861
Ensembl chr 8:53,979,813...54,008,855
JBrowse link
regulation of acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pdk1 pyruvate dehydrogenase kinase 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:5487511|PMID:22195962)
Ensembl
RGD
PMID:22195962 GO_REF:0000107 MGI:5487511 NCBI chr 3:56,705,824...56,733,040
Ensembl chr 3:56,705,871...56,733,038
JBrowse link
G Pdk2 pyruvate dehydrogenase kinase 2 involved_in ISO
IEA
ISS
(MGI:5428826|PMID:22360721)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:22360721 GO_REF:0000024 GO_REF:0000107 MGI:5428826 NCBI chr10:79,972,550...79,987,074
Ensembl chr10:79,972,556...79,987,085
JBrowse link
G Pdk3 pyruvate dehydrogenase kinase 3 involved_in ISO (PMID:22865452) RGD PMID:22865452 NCBI chr  X:58,486,699...58,553,533
Ensembl chr  X:58,486,554...58,553,557
JBrowse link
G Pdk4 pyruvate dehydrogenase kinase 4 involved_in ISO
IEA
ISS
(PMID:21852536)
GO_REF:0000107
(MGI:3692363|PMID:16606348)
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:16606348 PMID:21852536 GO_REF:0000024 GO_REF:0000107 MGI:3692363 NCBI chr 4:33,591,796...33,601,798
Ensembl chr 4:33,589,799...33,601,850
JBrowse link
regulation of acyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Snca synuclein alpha acts_upstream_of_or_within ISO MGI:2389489 (PMID:16636270), (PMID:16734431) RGD PMID:16636270 PMID:16734431 NCBI chr 4:89,696,420...89,797,240
Ensembl chr 4:89,696,420...89,796,262
JBrowse link
regulation of glutathione biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc7a11 solute carrier family 7 member 11 acts_upstream_of_or_within ISO MGI:1857061 (PMID:16037214) RGD PMID:16037214 NCBI chr 2:134,382,002...134,517,622
Ensembl chr 2:133,963,107...134,517,536
JBrowse link
regulation of heparan sulfate proteoglycan biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tm9sf2 transmembrane 9 superfamily member 2 involved_in ISO (PMID:28404855) RGD PMID:28404855 NCBI chr15:99,201,556...99,254,054
Ensembl chr15:99,201,489...99,254,049
JBrowse link
S-adenosylmethionine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mat1a methionine adenosyltransferase 1A involved_in IDA
IBA
ISO
IEA
GO_REF:0000033
(PMID:10677294), (PMID:25075345)
GO_REF:0000041
GO_Central
RGD
UniProt
PMID:10677294 PMID:25075345 PMID:9202427 PMID:10898761 PMID:19497982 GO_REF:0000033 GO_REF:0000041, RGD:1359039, RGD:7242777, RGD:7242770 NCBI chr16:16,983,084...17,001,284
Ensembl chr16:16,983,022...17,001,274
JBrowse link
G Mat2a methionine adenosyltransferase 2A acts_upstream_of_or_within
involved_in
TAS
ISO
IBA
IEA
IDA
(PMID:12023972)
GO_REF:0000033
GO_REF:0000041
(PMID:10644686), (PMID:25075345)
RGD
GO_Central
UniProt
PMID:10644686 PMID:12023972 PMID:25075345 PMID:11099469 PMID:10898761 More... GO_REF:0000033 GO_REF:0000041, RGD:1359040, RGD:7242777, RGD:727376 NCBI chr 4:104,489,877...104,495,447
Ensembl chr 4:104,488,466...104,495,493
JBrowse link
G Mat2al1 methionine adenosyltransferase 2A like 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr13:26,088,997...26,090,862
Ensembl chr13:26,089,606...26,090,793
JBrowse link
G Mat2b methionine adenosyltransferase 2 non-catalytic beta subunit involved_in IEA
IBA
ISS
ISO
GO_REF:0000041
GO_REF:0000033
GO_REF:0000024
(PMID:10644686), (PMID:25075345)
UniProt
GO_Central
RGD
PMID:10644686 PMID:25075345 GO_REF:0000024 GO_REF:0000033 GO_REF:0000041 NCBI chr10:25,106,928...25,122,982
Ensembl chr10:25,106,930...25,122,777
JBrowse link
G Mettl16 methyltransferase 16, RNA N6-adenosine acts_upstream_of ISO (PMID:28525753), (PMID:30197297), (PMID:30197299)
(MGI:6199095|PMID:30197299)
RGD PMID:28525753 PMID:30197297 PMID:30197299 MGI:6199095 NCBI chr10:59,640,915...59,697,291
Ensembl chr10:59,640,972...59,687,061
JBrowse link
succinyl-CoA biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mmut methylmalonyl-CoA mutase involved_in ISO (PMID:7904153) RGD PMID:7904153 NCBI chr 9:19,928,720...19,956,985
Ensembl chr 9:19,928,727...19,957,046
JBrowse link
taurine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdo1 cysteine dioxygenase type 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr18:39,432,473...39,447,253
Ensembl chr18:39,432,474...39,447,296
JBrowse link
G Csad cysteine sulfinic acid decarboxylase acts_upstream_of_or_within
involved_in
TAS
ISO
IEA
IBA
MGI:4331536 (PMID:24639894)
GO_REF:0000118
GO_REF:0000033
GO_REF:0000107
GO_REF:0000041
RGD
TreeGrafter
GO_Central
Ensembl
UniProt
PMID:24639894 PMID:7772604 GO_REF:0000033 GO_REF:0000041 GO_REF:0000107 GO_REF:0000118, RGD:632596 NCBI chr 7:133,308,571...133,337,914
Ensembl chr 7:133,308,574...133,337,615
JBrowse link
G Fmo1 flavin containing dimethylaniline monoxygenase 1 involved_in ISO
ISS
(PMID:32156684)
GO_REF:0000024
(MGI:6881635|PMID:32156684)
RGD
UniProt
PMID:32156684 GO_REF:0000024 MGI:6881635 NCBI chr13:75,182,184...75,214,439
Ensembl chr13:75,182,176...75,214,647
JBrowse link
G Fmo3 flavin containing dimethylaniline monoxygenase 3 involved_in ISO
IEA
(PMID:32156684)
GO_REF:0000107
RGD
Ensembl
PMID:32156684 GO_REF:0000107 NCBI chr13:75,309,367...75,334,915
Ensembl chr13:75,309,374...75,328,028
JBrowse link
thiamine diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc19a2 solute carrier family 19 member 2 involved_in ISO (PMID:8186267) RGD PMID:8186267 NCBI chr13:76,601,975...76,616,175
Ensembl chr13:76,601,900...76,616,172
JBrowse link
G Slc19a3 solute carrier family 19 member 3 involved_in ISO MGI:4948864 (PMID:28665968), (PMID:8186267) RGD PMID:8186267 PMID:28665968 NCBI chr 9:84,275,722...84,299,368
Ensembl chr 9:84,277,024...84,299,337
JBrowse link
G Slc25a19 solute carrier family 25 member 19 involved_in ISO MGI:3691853 (PMID:17035501), (PMID:8186267) RGD PMID:8186267 PMID:17035501 NCBI chr10:100,853,554...100,867,517
Ensembl chr10:100,847,168...100,867,447
JBrowse link
G Thtpa thiamine triphosphatase involved_in IEA
ISO
GO_REF:0000107
(PMID:18276586)
Ensembl
RGD
PMID:18276586 GO_REF:0000107 NCBI chr15:28,567,619...28,571,580
Ensembl chr15:28,567,323...28,571,580
JBrowse link
G Tpk1 thiamin pyrophosphokinase 1 involved_in ISO
IBA
IEA
(PMID:11342111)
(PMID:10567383)
GO_REF:0000033
GO_REF:0000041
RGD
GO_Central
UniProt
PMID:10567383 PMID:11342111 GO_REF:0000033 GO_REF:0000041 NCBI chr 4:72,170,134...72,557,707
Ensembl chr 4:72,170,134...72,557,694
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20292
    metabolic process 11720
      cellular metabolic process 10279
        sulfur compound metabolic process 339
          sulfur compound biosynthetic process 144
            3'-phosphoadenosine 5'-phosphosulfate biosynthetic process 2
            4-amino-3-isothiazolidinone biosynthetic process 0
            S-adenosylmethionine biosynthetic process 5
            S-glycoside biosynthetic process + 0
            S-methylmethionine biosynthetic process 0
            alkanesulfonate biosynthetic process + 4
            bacillithiol biosynthetic process 0
            biotin biosynthetic process 0
            camalexin biosynthetic process + 0
            cephalosporin biosynthetic process + 0
            cephamycin C biosynthetic process 0
            chondroitin sulfate biosynthetic process 19
            coenzyme M biosynthetic process 0
            dermatan sulfate biosynthetic process 3
            epothilone biosynthetic process 0
            gliotoxin biosynthetic process + 0
            glutathione biosynthetic process + 14
            glutathione derivative biosynthetic process + 4
            glycosinolate biosynthetic process + 0
            heparan sulfate proteoglycan biosynthetic process + 31
            heparin biosynthetic process 10
            hydrogen sulfide biosynthetic process + 5
            keratan sulfate biosynthetic process 5
            leukotriene D4 biosynthetic process 2
            lipoate biosynthetic process 2
            methionine catabolic process to 3-methylthiopropanoate 0
            methionine catabolic process to 3-methylthiopropanol 0
            mycothiol biosynthetic process 0
            penicillin biosynthetic process + 0
            pyochelin biosynthetic process 0
            sulfolipid biosynthetic process 0
            sulfur amino acid biosynthetic process + 15
            thiamine-containing compound biosynthetic process + 5
            thiazole biosynthetic process 0
            thioester biosynthetic process + 35
paths to the root