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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular nitrogen compound catabolic process
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Accession:GO:0044270 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of organic and inorganic nitrogenous compounds.
Synonyms:broad_synonym: nitrogen compound breakdown;   nitrogen compound catabolism;   nitrogen compound degradation


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10-formyltetrahydrofolate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALDH1L1 aldehyde dehydrogenase 1 family member L1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:126,103,565...126,197,758
Ensembl chr 3:126,103,562...126,197,994
JBrowse link
G ALDH1L2 aldehyde dehydrogenase 1 family member L2 involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000104 NCBI chr12:105,019,784...105,084,609
Ensembl chr12:105,019,784...105,107,643
JBrowse link
3'-UTR-mediated mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CPEB3 cytoplasmic polyadenylation element binding protein 3 involved_in IDA (PMID:21336257) UniProt PMID:21336257 NCBI chr10:92,046,692...92,291,499
Ensembl chr10:92,046,692...92,291,078
JBrowse link
G DHX36 DEAH-box helicase 36 involved_in IMP (PMID:26489465) UniProt PMID:26489465 NCBI chr 3:154,272,546...154,324,487
Ensembl chr 3:154,272,546...154,324,487
JBrowse link
G DND1 DND microRNA-mediated repression inhibitor 1 involved_in IDA (PMID:28297718) CACAO PMID:28297718 NCBI chr 5:140,670,794...140,673,576
Ensembl chr 5:140,670,794...140,673,576
JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D involved_in IEA
ISO
Ensembl
RGD
PMID:20805360 GO_REF:0000107 RGD:10042974 NCBI chr 4:82,352,498...82,373,991
Ensembl chr 4:82,352,498...82,374,503
JBrowse link
G KHSRP KH-type splicing regulatory protein involved_in IMP
IDA
(PMID:28275056)
(PMID:16126846)
CACAO
UniProt
PMID:16126846 PMID:28275056 NCBI chr19:6,413,102...6,424,811
Ensembl chr19:6,413,348...6,424,794
Ensembl chr19:6,413,348...6,424,794
JBrowse link
G MOV10 Mov10 RISC complex RNA helicase involved_in IDA (PMID:24726324) UniProt PMID:24726324 NCBI chr 1:112,674,427...112,702,377
Ensembl chr 1:112,673,141...112,700,746
JBrowse link
G PLEKHN1 pleckstrin homology domain containing N1 involved_in IBA
IDA
(PMID:21873635)
(PMID:29180010)
GO_Central
UniProt
PMID:21873635 PMID:29180010 NCBI chr 1:965,820...975,865
Ensembl chr 1:966,482...975,865
JBrowse link
G QKI QKI, KH domain containing RNA binding acts_upstream_of_or_within ISO (MGI:5316962|PMID:20631256) MGI PMID:20631256 MGI:5316962 NCBI chr 6:163,414,486...163,578,592
Ensembl chr 6:163,414,000...163,578,592
JBrowse link
G RBM24 RNA binding motif protein 24 involved_in IDA (PMID:24375645) UniProt PMID:24375645 NCBI chr 6:17,281,361...17,293,875
Ensembl chr 6:17,281,361...17,293,871
JBrowse link
G RC3H1 ring finger and CCCH-type domains 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:173,931,084...174,022,357
Ensembl chr 1:173,931,084...174,022,357
Ensembl chr 1:173,931,084...174,022,357
JBrowse link
G TARDBP TAR DNA binding protein involved_in IDA (PMID:28335005) CACAO PMID:28335005 NCBI chr 1:11,012,654...11,030,528
Ensembl chr 1:11,012,662...11,030,528
Ensembl chr 1:11,012,662...11,030,528
Ensembl chr 1:11,012,662...11,030,528
Ensembl chr 1:11,012,662...11,030,528
JBrowse link
G TRIM71 tripartite motif containing 71 involved_in IDA (PMID:23125361) CACAO PMID:23125361 NCBI chr 3:32,817,997...32,897,824
Ensembl chr 3:32,817,997...32,897,824
JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in IMP
IDA
(PMID:26255671)
(PMID:24726324)
UniProt PMID:24726324 PMID:26255671 NCBI chr19:18,831,405...18,868,230
Ensembl chr19:18,831,938...18,868,236
Ensembl chr19:18,831,938...18,868,236
JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in IBA
ISS
IDA
(PMID:21873635)
(PMID:19909337)
GO_Central
UniProt
PMID:19909337 PMID:21873635 GO_REF:0000024 NCBI chr 1:37,474,518...37,484,377
Ensembl chr 1:37,474,580...37,484,377
JBrowse link
G ZC3H12D zinc finger CCCH-type containing 12D involved_in ISS UniProt GO_REF:0000024 NCBI chr 6:149,446,795...149,485,014
Ensembl chr 6:149,446,795...149,485,014
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IDA
IMP
(PMID:11719186), (PMID:15687258), (PMID:20221403), (PMID:27193233), (PMID:9703499)
(PMID:14679154), (PMID:15187101), (PMID:15634918), (PMID:15766526)
UniProt PMID:9703499 PMID:11719186 PMID:14679154 PMID:15187101 PMID:15634918 PMID:15687258 PMID:15766526 PMID:20221403 PMID:27193233 NCBI chr19:39,406,847...39,409,407
Ensembl chr19:39,406,847...39,409,412
JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in IDA
IMP
(PMID:15467755), (PMID:15538381), (PMID:15687258), (PMID:18326031), (PMID:19179481), (PMID:24700863), (PMID:26542173)
(PMID:12198173), (PMID:25014217), (PMID:25106868)
UniProt PMID:12198173 PMID:15467755 PMID:15538381 PMID:15687258 PMID:18326031 PMID:19179481 PMID:24700863 PMID:25014217 PMID:25106868 PMID:26542173 NCBI chr14:68,787,655...68,796,243
Ensembl chr14:68,787,660...68,796,253
JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 involved_in ISS
IMP
(PMID:25106868) UniProt PMID:25106868 GO_REF:0000024 NCBI chr 2:43,222,402...43,226,606
Ensembl chr 2:43,222,402...43,226,606
JBrowse link
3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANGEL2 angel homolog 2 involved_in IBA
IMP
(PMID:21873635)
(PMID:22547059)
GO_Central
HGNC
PMID:21873635 PMID:22547059 NCBI chr 1:212,992,182...213,015,872
Ensembl chr 1:212,992,182...213,015,867
JBrowse link
G BOLL boule homolog, RNA binding protein involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:197,726,890...197,786,312
Ensembl chr 2:197,726,879...197,786,762
JBrowse link
G DAZ1 deleted in azoospermia 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  Y:23,129,355...23,199,117
Ensembl chr  Y:23,129,355...23,199,094
Ensembl chr  Y:23,129,355...23,199,094
JBrowse link
G DAZ2 deleted in azoospermia 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  Y:23,219,457...23,291,356
Ensembl chr  Y:23,219,434...23,291,356
JBrowse link
G DAZ3 deleted in azoospermia 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  Y:24,763,069...24,813,393
Ensembl chr  Y:24,763,069...24,813,492
JBrowse link
G DAZ4 deleted in azoospermia 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  Y:24,833,806...24,907,040
Ensembl chr  Y:24,833,843...24,907,040
JBrowse link
G DAZL deleted in azoospermia like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:16,586,792...16,605,423
Ensembl chr 3:16,586,792...16,670,306
JBrowse link
G ELAVL1 ELAV like RNA binding protein 1 involved_in IMP
IDA
(PMID:19029303)
(PMID:14517288), (PMID:26489465), (PMID:29180010)
UniProt PMID:14517288 PMID:19029303 PMID:26489465 PMID:29180010 NCBI chr19:7,958,573...8,005,641
Ensembl chr19:7,958,573...8,005,659
JBrowse link
G ELAVL4 ELAV like RNA binding protein 4 involved_in IDA (PMID:12034726) UniProt PMID:12034726 NCBI chr 1:50,048,055...50,203,772
Ensembl chr 1:50,024,029...50,203,786
Ensembl chr 1:50,024,029...50,203,786
JBrowse link
G HNRNPA0 heterogeneous nuclear ribonucleoprotein A0 involved_in TAS
ISS
(PMID:20932473) UniProt PMID:20932473 GO_REF:0000024 NCBI chr 5:137,745,651...137,754,363
Ensembl chr 5:137,745,651...137,754,363
JBrowse link
G HNRNPC heterogeneous nuclear ribonucleoprotein C involved_in IMP (PMID:16010978) UniProt PMID:16010978 NCBI chr14:21,209,147...21,269,442
Ensembl chr14:21,209,136...21,269,494
JBrowse link
G MAPK14 mitogen-activated protein kinase 14 involved_in TAS (PMID:20932473) UniProt PMID:20932473 NCBI chr 6:36,027,711...36,122,964
Ensembl chr 6:36,027,677...36,111,236
JBrowse link
G MAPKAPK2 MAPK activated protein kinase 2 involved_in IDA (PMID:14517288), (PMID:15014438), (PMID:20932473) UniProt PMID:14517288 PMID:15014438 PMID:20932473 NCBI chr 1:206,684,905...206,734,283
Ensembl chr 1:206,684,944...206,734,283
Ensembl chr 1:206,684,944...206,734,283
JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor involved_in IDA (PMID:15294994) BHF-UCL PMID:15294994 NCBI chr 3:38,138,661...38,143,022
Ensembl chr 3:38,138,478...38,143,022
JBrowse link
G PTBP1 polypyrimidine tract binding protein 1 ISO RGD PMID:11696543 RGD:10045987 NCBI chr19:797,452...812,316
Ensembl chr19:797,075...812,327
JBrowse link
G RBM10 RNA binding motif protein 10 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4367529|PMID:19508861) Ensembl
MGI
PMID:19508861 GO_REF:0000107 MGI:4367529 NCBI chr  X:47,145,196...47,186,813
Ensembl chr  X:47,145,221...47,186,813
JBrowse link
G RBM38 RNA binding motif protein 38 involved_in IDA (PMID:17050675) UniProt PMID:17050675 NCBI chr20:57,391,396...57,409,333
Ensembl chr20:57,391,396...57,409,333
JBrowse link
G TARDBP TAR DNA binding protein involved_in IDA (PMID:17481916) BHF-UCL PMID:17481916 NCBI chr 1:11,012,654...11,030,528
Ensembl chr 1:11,012,662...11,030,528
Ensembl chr 1:11,012,662...11,030,528
Ensembl chr 1:11,012,662...11,030,528
Ensembl chr 1:11,012,662...11,030,528
JBrowse link
G TIRAP TIR domain containing adaptor protein involved_in IDA (PMID:15294994) BHF-UCL PMID:15294994 NCBI chr11:126,283,093...126,294,933
Ensembl chr11:126,283,065...126,298,845
JBrowse link
G YBX3 Y-box binding protein 3 involved_in IC (PMID:22711822) BHF-UCL PMID:22711822 NCBI chr12:10,699,084...10,723,442
Ensembl chr12:10,699,089...10,723,323
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in IDA (PMID:15014438) UniProt PMID:15014438 NCBI chr19:39,406,847...39,409,407
Ensembl chr19:39,406,847...39,409,412
JBrowse link
5-methylcytosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TET1 tet methylcytosine dioxygenase 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr10:68,560,337...68,700,794
Ensembl chr10:68,560,337...68,694,487
JBrowse link
G TET2 tet methylcytosine dioxygenase 2 involved_in IDA
IEA
(PMID:24315485) UniProt PMID:24315485 GO_REF:0000104 NCBI chr 4:105,145,875...105,279,803
Ensembl chr 4:105,145,875...105,279,816
JBrowse link
G TET3 tet methylcytosine dioxygenase 3 involved_in IEA UniProt
InterPro
GO_REF:0000002 GO_REF:0000104 NCBI chr 2:73,982,036...74,135,394
Ensembl chr 2:73,986,404...74,108,176
Ensembl chr 2:73,986,404...74,108,176
JBrowse link
acetyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAT1 acetyl-CoA acetyltransferase 1 involved_in IDA (PMID:17371050) BHF-UCL PMID:17371050 NCBI chr11:108,116,705...108,148,822
Ensembl chr11:108,116,695...108,147,603
JBrowse link
G NUDT7 nudix hydrolase 7 involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:2137102|PMID:11415433) UniProt
MGI
PMID:11415433 GO_REF:0000024 MGI:2137102 NCBI chr16:77,722,514...77,742,260
Ensembl chr16:77,722,492...77,742,260
JBrowse link
adenosine 5'-(hexahydrogen pentaphosphate) catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT10 nudix hydrolase 10 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:51,332,231...51,337,525
Ensembl chr  X:51,332,231...51,337,525
JBrowse link
G NUDT11 nudix hydrolase 11 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:51,490,011...51,496,592
Ensembl chr  X:51,490,011...51,496,592
JBrowse link
G NUDT3 nudix hydrolase 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:34,279,679...34,392,669
Ensembl chr 6:34,279,679...34,392,669
JBrowse link
G NUDT4 nudix hydrolase 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:93,377,925...93,408,146
Ensembl chr12:93,377,883...93,408,146
JBrowse link
G NUDT4B nudix hydrolase 4B involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:148,748,774...148,752,415
Ensembl chr 1:148,748,894...148,750,099
Ensembl chr 1:148,748,894...148,750,099
JBrowse link
adenosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in
acts_upstream_of_or_within
ISS
IDA
IBA
(PMID:8894685)
(PMID:16670267)
(PMID:21873635)
UniProt
MGI
GO_Central
PMID:8894685 PMID:16670267 PMID:21873635 GO_REF:0000024 NCBI chr20:44,619,522...44,651,699
Ensembl chr20:44,619,522...44,652,233
JBrowse link
G ADA2 adenosine deaminase 2 involved_in IEA
IDA
IBA
(PMID:20147294)
(PMID:21873635)
InterPro
UniProt
GO_Central
PMID:20147294 PMID:21873635 GO_REF:0000002 NCBI chr22:17,178,790...17,221,854
Ensembl chr22:17,178,790...17,258,235
JBrowse link
G ADAL adenosine deaminase like involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:43,330,341...43,354,569
Ensembl chr15:43,330,672...43,354,569
Ensembl chr15:43,330,672...43,354,569
JBrowse link
G XDH xanthine dehydrogenase involved_in IDA (PMID:1619276) MGI PMID:1619276 NCBI chr 2:31,334,320...31,414,777
Ensembl chr 2:31,334,321...31,414,742
JBrowse link
ADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMPD3 adenosine monophosphate deaminase 3 involved_in ISO (MGI:5917829|PMID:28746349) MGI PMID:28746349 MGI:5917829 NCBI chr11:10,450,388...10,507,579
Ensembl chr11:10,308,313...10,507,579
JBrowse link
G ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 involved_in ISO (MGI:3760051|PMID:17502665) MGI PMID:17502665 MGI:3760051 NCBI chr10:95,710,901...95,877,266
Ensembl chr10:95,711,779...95,877,266
JBrowse link
G NT5E 5'-nucleotidase ecto involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:85,450,083...85,495,784
Ensembl chr 6:85,449,584...85,495,791
JBrowse link
G NUDT9 nudix hydrolase 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2158549|PMID:11825615) Ensembl
MGI
PMID:11825615 GO_REF:0000107 MGI:2158549 NCBI chr 4:87,420,002...87,459,455
Ensembl chr 4:87,422,573...87,459,455
JBrowse link
alkaloid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP2D6 cytochrome P450 family 2 subfamily D member 6 involved_in IDA (PMID:15039299) BHF-UCL PMID:15039299 NCBI chr22:42,126,499...42,130,810
Ensembl chr22:42,126,499...42,130,881
Ensembl chr22:42,126,499...42,130,881
JBrowse link
G CYP3A4 cytochrome P450 family 3 subfamily A member 4 involved_in IDA (PMID:15039299) BHF-UCL PMID:15039299 NCBI chr 7:99,756,967...99,784,184
Ensembl chr 7:99,756,960...99,784,248
JBrowse link
G CYP3A5 cytochrome P450 family 3 subfamily A member 5 involved_in IDA (PMID:15039299) BHF-UCL PMID:15039299 NCBI chr 7:99,648,194...99,679,996
Ensembl chr 7:99,648,194...99,679,998
JBrowse link
allantoin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALLC allantoicase involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:3,645,368...3,702,671
Ensembl chr 2:3,658,200...3,702,671
JBrowse link
amino-acid betaine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BHMT betaine--homocysteine S-methyltransferase involved_in IEA UniProt GO_REF:0000041 NCBI chr 5:79,111,809...79,132,288
Ensembl chr 5:79,111,809...79,132,288
JBrowse link
G DMGDH dimethylglycine dehydrogenase involved_in IEA UniProt GO_REF:0000041 NCBI chr 5:78,997,564...79,069,674
Ensembl chr 5:78,997,564...79,236,038
JBrowse link
AMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:44,619,522...44,651,699
Ensembl chr20:44,619,522...44,652,233
JBrowse link
G AMPD3 adenosine monophosphate deaminase 3 involved_in TAS (PMID:9291127) PINC PMID:9291127 NCBI chr11:10,450,388...10,507,579
Ensembl chr11:10,308,313...10,507,579
JBrowse link
G NT5C1A 5'-nucleotidase, cytosolic IA involved_in IDA (PMID:11133996) MGI PMID:11133996 NCBI chr 1:39,651,229...39,672,107
Ensembl chr 1:39,659,121...39,672,038
Ensembl chr 1:39,659,121...39,672,038
JBrowse link
G NT5C1B 5'-nucleotidase, cytosolic IB involved_in ISO (MGI:2153435|PMID:11690631) MGI PMID:11690631 MGI:2153435 NCBI chr 2:18,562,871...18,589,569
Ensembl chr 2:18,562,872...18,589,572
JBrowse link
G NT5E 5'-nucleotidase ecto involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3770326|PMID:16547283)
GO_Central
MGI
RGD
PMID:16547283 PMID:21414400 PMID:21873635 MGI:3770326 RGD:5134346 NCBI chr 6:85,450,083...85,495,784
Ensembl chr 6:85,449,584...85,495,791
JBrowse link
G XDH xanthine dehydrogenase involved_in IDA (PMID:1619276) MGI PMID:1619276 NCBI chr 2:31,334,320...31,414,777
Ensembl chr 2:31,334,321...31,414,742
JBrowse link
apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASP3 caspase 3 involved_in TAS Reactome Reactome:R-HSA-140342 NCBI chr 4:184,627,696...184,649,447
Ensembl chr 4:184,627,696...184,649,509
JBrowse link
G CECR2 CECR2 histone acetyl-lysine reader involved_in TAS (PMID:12762840) HGNC-UCL PMID:12762840 NCBI chr22:17,359,949...17,558,151
Ensembl chr22:17,359,949...17,558,149
Ensembl chr22:17,359,949...17,558,149
JBrowse link
G DFFA DNA fragmentation factor subunit alpha involved_in TAS
IEA
Reactome
InterPro
GO_REF:0000002 Reactome:R-HSA-140342 NCBI chr 1:10,456,522...10,472,529
Ensembl chr 1:10,456,522...10,472,529
JBrowse link
G DFFB DNA fragmentation factor subunit beta involved_in
acts_upstream_of_or_within
IBA
IDA
ISO
IEA
TAS
(PMID:21873635)
(PMID:15572351)
(PMID:22253444)
GO_Central
MGI
CAFA
RGD
InterPro
Reactome
PMID:11425895 PMID:15572351 PMID:21873635 PMID:22253444 GO_REF:0000002 RGD:628524 Reactome:R-HSA-140342 NCBI chr 1:3,857,286...3,885,429
Ensembl chr 1:3,857,267...3,885,429
JBrowse link
G DICER1 dicer 1, ribonuclease III involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:95,086,228...95,158,263
Ensembl chr14:95,086,228...95,158,010
JBrowse link
G DNASE1L3 deoxyribonuclease 1 like 3 involved_in
acts_upstream_of_or_within
IDA
ISO
IBA
(PMID:23229555)
(MGI:2385551|PMID:12050166)
(PMID:21873635)
UniProt
MGI
GO_Central
PMID:12050166 PMID:21873635 PMID:23229555 MGI:2385551 NCBI chr 3:58,192,257...58,210,972
Ensembl chr 3:58,192,257...58,214,697
JBrowse link
G DNASE2 deoxyribonuclease 2, lysosomal involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr19:12,875,209...12,881,449
Ensembl chr19:12,875,209...12,881,466
JBrowse link
G DNASE2B deoxyribonuclease 2 beta involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:84,398,484...84,415,895
Ensembl chr 1:84,398,532...84,415,018
Ensembl chr 1:84,398,532...84,415,018
JBrowse link
G ENDOG endonuclease G involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:3029597|PMID:14663139)
GO_Central
MGI
PMID:14663139 PMID:21873635 MGI:3029597 NCBI chr 9:128,818,402...128,822,676
Ensembl chr 9:128,818,500...128,822,676
JBrowse link
G EXOG exo/endonuclease G involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:38,496,127...38,526,304
Ensembl chr 3:38,496,127...38,542,161
JBrowse link
G FOXL2 forkhead box L2 involved_in IMP (PMID:16153597) UniProt PMID:16153597 NCBI chr 3:138,944,224...138,947,137
Ensembl chr 3:138,944,224...138,947,137
JBrowse link
G H1-0 H1.0 linker histone involved_in TAS Reactome Reactome:R-HSA-140342 NCBI chr22:37,805,229...37,807,432
Ensembl chr22:37,805,093...37,807,436
Ensembl chr22:37,805,093...37,807,436
JBrowse link
G HMGB1 high mobility group box 1 involved_in TAS Reactome Reactome:R-HSA-140342 NCBI chr13:30,456,704...30,617,597
Ensembl chr13:30,456,704...30,617,597
JBrowse link
G HMGB2 high mobility group box 2 involved_in TAS Reactome Reactome:R-HSA-140342 NCBI chr 4:173,331,376...173,334,358
Ensembl chr 4:173,331,376...173,334,432
JBrowse link
G KPNA1 karyopherin subunit alpha 1 involved_in TAS Reactome Reactome:R-HSA-140342 NCBI chr 3:122,421,902...122,514,939
Ensembl chr 3:122,421,902...122,514,945
JBrowse link
G KPNB1 karyopherin subunit beta 1 involved_in TAS Reactome Reactome:R-HSA-140342 NCBI chr17:47,649,919...47,685,505
Ensembl chr17:47,649,476...47,685,505
JBrowse link
bilirubin conjugation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UGT1A1 UDP glucuronosyltransferase family 1 member A1 involved_in TAS Reactome Reactome:R-HSA-9632039 NCBI chr 2:233,760,270...233,773,300
Ensembl chr 2:233,760,270...233,773,300
Ensembl chr 2:233,760,270...233,773,300
JBrowse link
G UGT1A4 UDP glucuronosyltransferase family 1 member A4 involved_in TAS Reactome Reactome:R-HSA-159194 NCBI chr 2:233,718,736...233,773,300
Ensembl chr 2:233,718,778...233,773,299
Ensembl chr 2:233,718,778...233,773,299
JBrowse link
butyryl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT7 nudix hydrolase 7 involved_in ISS UniProt GO_REF:0000024 NCBI chr16:77,722,514...77,742,260
Ensembl chr16:77,722,492...77,742,260
JBrowse link
cAMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDE10A phosphodiesterase 10A involved_in IEA UniProt GO_REF:0000041 NCBI chr 6:165,327,287...165,988,115
Ensembl chr 6:165,327,287...165,988,078
JBrowse link
G PDE4A phosphodiesterase 4A involved_in IEA UniProt GO_REF:0000041 NCBI chr19:10,416,773...10,469,631
Ensembl chr19:10,416,773...10,469,630
JBrowse link
G PDE4B phosphodiesterase 4B involved_in IEA UniProt GO_REF:0000041 NCBI chr 1:65,792,510...66,374,579
Ensembl chr 1:65,792,514...66,374,579
JBrowse link
G PDE4C phosphodiesterase 4C involved_in IEA UniProt GO_REF:0000041 NCBI chr19:18,207,965...18,248,200
Ensembl chr19:18,208,652...18,248,200
JBrowse link
G PDE4D phosphodiesterase 4D involved_in IEA
IBA
IDA
(PMID:21873635)
(PMID:20819076)
UniProt
GO_Central
BHF-UCL
PMID:20819076 PMID:21873635 GO_REF:0000041 NCBI chr 5:58,969,038...60,524,329
Ensembl chr 5:58,969,038...60,522,120
JBrowse link
G PDE7A phosphodiesterase 7A involved_in IEA UniProt GO_REF:0000041 NCBI chr 8:65,714,334...65,842,064
Ensembl chr 8:65,717,510...65,842,322
Ensembl chr 8:65,717,510...65,842,322
JBrowse link
G PDE7B phosphodiesterase 7B involved_in IEA UniProt GO_REF:0000041 NCBI chr 6:135,851,701...136,195,574
Ensembl chr 6:135,851,701...136,195,574
JBrowse link
G PDE8A phosphodiesterase 8A involved_in IEA UniProt GO_REF:0000041 NCBI chr15:84,980,467...85,139,142
Ensembl chr15:84,980,440...85,139,145
JBrowse link
G PDE8B phosphodiesterase 8B involved_in IEA UniProt GO_REF:0000041 NCBI chr 5:77,180,304...77,428,256
Ensembl chr 5:77,086,732...77,427,124
Ensembl chr 5:77,086,732...77,427,124
Ensembl chr 5:77,086,732...77,427,124
JBrowse link
carnitine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACADL acyl-CoA dehydrogenase long chain involved_in ISS BHF-UCL GO_REF:0000024 NCBI chr 2:210,187,923...210,225,447
Ensembl chr 2:210,187,126...210,225,447
JBrowse link
cellular amide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NIT1 nitrilase 1 involved_in ISS (PMID:9671749) UniProt PMID:9671749 NCBI chr 1:161,118,092...161,125,446
Ensembl chr 1:161,118,086...161,125,445
JBrowse link
G PM20D1 peptidase M20 domain containing 1 involved_in IDA
IBA
(PMID:27374330)
(PMID:21873635)
UniProt
GO_Central
PMID:21873635 PMID:27374330 NCBI chr 1:205,828,025...205,850,132
Ensembl chr 1:205,828,025...205,850,132
JBrowse link
cellular lactam catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPEP1 dipeptidase 1 involved_in TAS (PMID:12144777) UniProt PMID:12144777 NCBI chr16:89,613,308...89,641,540
Ensembl chr16:89,613,308...89,638,456
JBrowse link
cGMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDE10A phosphodiesterase 10A involved_in IEA UniProt GO_REF:0000041 NCBI chr 6:165,327,287...165,988,115
Ensembl chr 6:165,327,287...165,988,078
JBrowse link
G PDE1A phosphodiesterase 1A involved_in IEA
ISO
Ensembl
RGD
PMID:16514069 GO_REF:0000107 RGD:2312521 NCBI chr 2:182,136,453...182,523,375
Ensembl chr 2:182,140,036...182,523,192
JBrowse link
G PDE2A phosphodiesterase 2A involved_in IDA
IBA
(PMID:19828435)
(PMID:21873635)
UniProt
GO_Central
PMID:19828435 PMID:21873635 NCBI chr11:72,576,141...72,674,422
Ensembl chr11:72,576,141...72,674,591
JBrowse link
G PDE5A phosphodiesterase 5A involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2450821|PMID:12554648) UniProt
MGI
PMID:12554648 GO_REF:0000041 MGI:2450821 NCBI chr 4:119,494,403...119,628,804
Ensembl chr 4:119,494,397...119,628,804
JBrowse link
G PDE9A phosphodiesterase 9A involved_in IDA
IBA
IEA
(PMID:25799991)
(PMID:21873635)
UniProt
GO_Central
PMID:21873635 PMID:25799991 GO_REF:0000041 NCBI chr21:42,653,621...42,775,509
Ensembl chr21:42,653,621...42,775,509
JBrowse link
CMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UPP1 uridine phosphorylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:48,088,308...48,108,736
Ensembl chr 7:48,088,628...48,108,736
JBrowse link
G UPP2 uridine phosphorylase 2 involved_in ISO (MGI:2683856|PMID:14715930) MGI PMID:14715930 MGI:2683856 NCBI chr 2:157,995,179...158,136,154
Ensembl chr 2:157,876,702...158,136,154
JBrowse link
cobalamin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CUBN cubilin ISO RGD PMID:14576052 RGD:8554807 NCBI chr10:16,823,966...17,130,492
Ensembl chr10:16,823,966...17,129,811
Ensembl chr10:16,823,966...17,129,811
JBrowse link
coenzyme A catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT7 nudix hydrolase 7 involved_in
acts_upstream_of_or_within
ISS
ISO
IBA
(MGI:2137102|PMID:11415433)
(PMID:21873635)
UniProt
MGI
GO_Central
PMID:11415433 PMID:21873635 GO_REF:0000024 MGI:2137102 NCBI chr16:77,722,514...77,742,260
Ensembl chr16:77,722,492...77,742,260
JBrowse link
CRD-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHX9 DExH-box helicase 9 involved_in IMP (PMID:19029303) UniProt PMID:19029303 NCBI chr 1:182,839,347...182,887,982
Ensembl chr 1:182,839,347...182,887,982
JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in IBA
IMP
(PMID:21873635)
(PMID:19029303)
GO_Central
UniProt
PMID:19029303 PMID:21873635 NCBI chr 1:244,850,297...244,864,543
Ensembl chr 1:244,840,638...244,864,560
JBrowse link
G IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 involved_in IDA (PMID:19029303) UniProt PMID:19029303 NCBI chr17:48,997,385...49,056,145
Ensembl chr17:48,997,385...49,056,145
JBrowse link
G SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein involved_in IBA
IMP
(PMID:21873635)
(PMID:19029303)
GO_Central
UniProt
PMID:19029303 PMID:21873635 NCBI chr 6:85,607,784...85,643,862
Ensembl chr 6:85,607,785...85,643,792
Ensembl chr 6:85,607,785...85,643,792
JBrowse link
G YBX1 Y-box binding protein 1 involved_in IMP (PMID:19029303) UniProt PMID:19029303 NCBI chr 1:42,682,418...42,703,805
Ensembl chr 1:42,682,418...42,703,805
JBrowse link
CTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in IDA (PMID:11278936) UniProt PMID:11278936 NCBI chr10:99,659,509...99,711,241
Ensembl chr10:99,659,509...99,711,241
JBrowse link
CUT catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DIS3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease involved_in IMP (PMID:19056938) UniProt PMID:19056938 NCBI chr13:72,752,169...72,781,900
Ensembl chr13:72,752,169...72,782,096
JBrowse link
G EXOSC10 exosome component 10 involved_in IMP (PMID:19056938) UniProt PMID:19056938 NCBI chr 1:11,066,613...11,099,869
Ensembl chr 1:11,066,618...11,099,869
JBrowse link
G EXOSC2 exosome component 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:130,693,760...130,704,894
Ensembl chr 9:130,693,721...130,704,894
JBrowse link
G EXOSC3 exosome component 3 involved_in IBA
IMP
(PMID:21873635)
(PMID:19056938)
GO_Central
UniProt
PMID:19056938 PMID:21873635 NCBI chr 9:37,779,714...37,785,092
Ensembl chr 9:37,766,978...37,801,437
Ensembl chr 9:37,766,978...37,801,437
JBrowse link
cyanate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MPST mercaptopyruvate sulfurtransferase involved_in TAS (PMID:9070219) PINC PMID:9070219 NCBI chr22:37,019,742...37,029,815
Ensembl chr22:37,019,635...37,029,822
Ensembl chr22:37,019,635...37,029,822
JBrowse link
G TST thiosulfate sulfurtransferase involved_in TAS (PMID:9070219) PINC PMID:9070219 NCBI chr22:37,010,859...37,020,183
Ensembl chr22:37,010,859...37,020,183
JBrowse link
cyclic nucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNP 2',3'-cyclic nucleotide 3' phosphodiesterase involved_in IEA InterPro GO_REF:0000002 NCBI chr17:41,966,795...41,977,740
Ensembl chr17:41,966,763...41,977,740
JBrowse link
cytidine deamination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AICDA activation induced cytidine deaminase involved_in IEA GOC GO_REF:0000108 NCBI chr12:8,602,170...8,612,970
Ensembl chr12:8,602,170...8,612,867
JBrowse link
G APOBEC1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 involved_in IEA GOC GO_REF:0000108 NCBI chr12:7,649,400...7,670,599
Ensembl chr12:7,649,400...7,665,908
JBrowse link
G APOBEC2 apolipoprotein B mRNA editing enzyme catalytic subunit 2 involved_in IEA GOC GO_REF:0000108 NCBI chr 6:41,053,202...41,064,891
Ensembl chr 6:41,053,304...41,064,511
Ensembl chr 6:41,053,304...41,064,511
JBrowse link
G APOBEC3A apolipoprotein B mRNA editing enzyme catalytic subunit 3A involved_in IEA GOC GO_REF:0000108 NCBI chr22:38,957,609...38,963,184
Ensembl chr22:38,952,741...38,992,778
JBrowse link
G APOBEC3A_B APOBEC3A and APOBEC3B deletion hybrid involved_in IEA GOC GO_REF:0000108 Ensembl chr22:38,952,741...38,992,778 JBrowse link
G APOBEC3B apolipoprotein B mRNA editing enzyme catalytic subunit 3B involved_in IEA GOC GO_REF:0000108 NCBI chr22:38,982,347...38,992,779
Ensembl chr22:38,982,347...38,992,804
JBrowse link
G APOBEC3C apolipoprotein B mRNA editing enzyme catalytic subunit 3C involved_in IDA (PMID:21632763) UniProt PMID:21632763 NCBI chr22:39,014,236...39,020,352
Ensembl chr22:39,014,257...39,020,352
JBrowse link
G APOBEC3D apolipoprotein B mRNA editing enzyme catalytic subunit 3D involved_in IEA GOC GO_REF:0000108 NCBI chr22:39,021,127...39,033,277
Ensembl chr22:39,021,113...39,033,277
JBrowse link
G APOBEC3F apolipoprotein B mRNA editing enzyme catalytic subunit 3F involved_in IEA GOC GO_REF:0000108 NCBI chr22:39,019,081...39,055,972
Ensembl chr22:39,040,604...39,055,972
JBrowse link
G APOBEC3G apolipoprotein B mRNA editing enzyme catalytic subunit 3G involved_in IDA (PMID:16378963) UniProt PMID:16378963 NCBI chr22:39,077,005...39,087,743
Ensembl chr22:39,077,067...39,087,743
JBrowse link
G APOBEC3H apolipoprotein B mRNA editing enzyme catalytic subunit 3H involved_in IEA GOC GO_REF:0000108 NCBI chr22:39,097,203...39,104,067
Ensembl chr22:39,097,224...39,104,067
JBrowse link
G CDA cytidine deaminase involved_in IBA
ISO
IDA
(PMID:21873635)
(PMID:9596658)
GO_Central
RGD
UniProt
PMID:675715 PMID:9596658 PMID:21873635 RGD:2316616 NCBI chr 1:20,589,097...20,618,903
Ensembl chr 1:20,589,086...20,618,903
JBrowse link
G CDADC1 cytidine and dCMP deaminase domain containing 1 involved_in IDA (PMID:26945630) UniProt PMID:26945630 NCBI chr13:49,247,875...49,293,486
Ensembl chr13:49,247,925...49,293,485
JBrowse link
dADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT18 nudix hydrolase 18 involved_in IDA (PMID:22556419) UniProt PMID:22556419 NCBI chr 8:22,106,872...22,110,355
Ensembl chr 8:22,106,874...22,109,419
JBrowse link
dAMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:44,619,522...44,651,699
Ensembl chr20:44,619,522...44,652,233
JBrowse link
G NT5C1A 5'-nucleotidase, cytosolic IA involved_in IDA (PMID:11133996) MGI PMID:11133996 NCBI chr 1:39,651,229...39,672,107
Ensembl chr 1:39,659,121...39,672,038
Ensembl chr 1:39,659,121...39,672,038
JBrowse link
G PNP purine nucleoside phosphorylase involved_in IDA (PMID:6771276) MGI PMID:6771276 NCBI chr14:20,469,406...20,477,089
Ensembl chr14:20,468,954...20,477,094
Ensembl chr14:20,468,954...20,477,094
JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:31,334,320...31,414,777
Ensembl chr 2:31,334,321...31,414,742
JBrowse link
dATP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2155238|PMID:9478961), (MGI:3619310|PMID:14607964)
(MGI:76875|PMID:7592575)
(MGI:72798|PMID:7731963)
(MGI:74163|PMID:7670465)
Ensembl
MGI
PMID:7592575 PMID:7670465 PMID:7731963 PMID:9478961 PMID:14607964 GO_REF:0000107 MGI:2155238 MGI:3619310 MGI:72798 MGI:74163 MGI:76875 NCBI chr20:44,619,522...44,651,699
Ensembl chr20:44,619,522...44,652,233
JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IDA (PMID:24141705) UniProt PMID:24141705 NCBI chr20:36,889,773...36,951,708
Ensembl chr20:36,889,773...36,951,901
Ensembl chr20:36,889,773...36,951,901
Ensembl chr20:36,889,773...36,951,901
JBrowse link
dCMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5C 5', 3'-nucleotidase, cytosolic involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:75,130,228...75,131,965
Ensembl chr17:75,130,225...75,131,757
JBrowse link
G UPP1 uridine phosphorylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:48,088,308...48,108,736
Ensembl chr 7:48,088,628...48,108,736
JBrowse link
G UPP2 uridine phosphorylase 2 involved_in IDA (PMID:12849978) MGI PMID:12849978 NCBI chr 2:157,995,179...158,136,154
Ensembl chr 2:157,876,702...158,136,154
JBrowse link
dCTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTPP1 dCTP pyrophosphatase 1 involved_in IBA
IMP
(PMID:21873635)
(PMID:24467396)
GO_Central
UniProt
PMID:21873635 PMID:24467396 NCBI chr16:30,423,615...30,430,030
Ensembl chr16:30,423,615...30,430,030
JBrowse link
deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3807625|PMID:18625844) Ensembl
MGI
PMID:18625844 GO_REF:0000107 MGI:3807625 NCBI chr 8:17,221,981...17,246,857
Ensembl chr 8:17,224,966...17,246,878
JBrowse link
G DCP1A decapping mRNA 1A involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 3:53,283,429...53,347,543
Ensembl chr 3:53,283,429...53,347,586
JBrowse link
G DCP1B decapping mRNA 1B involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr12:1,941,591...2,004,457
Ensembl chr12:1,946,053...2,004,535
JBrowse link
G DCP2 decapping mRNA 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:112,976,702...113,022,195
Ensembl chr 5:112,976,702...113,022,195
JBrowse link
G DCPS decapping enzyme, scavenger involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr11:126,304,060...126,350,005
Ensembl chr11:126,304,060...126,350,005
JBrowse link
G LSM1 LSM1 homolog, mRNA degradation associated involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:38,163,321...38,176,730
Ensembl chr 8:38,163,335...38,176,730
JBrowse link
G NOCT nocturnin involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3807625|PMID:18625844) Ensembl
MGI
PMID:18625844 GO_REF:0000107 MGI:3807625 NCBI chr 4:139,015,781...139,045,939
Ensembl chr 4:139,015,781...139,045,939
JBrowse link
G PAN3 poly(A) specific ribonuclease subunit PAN3 acts_upstream_of_or_within ISO (MGI:3807625|PMID:18625844) MGI PMID:18625844 MGI:3807625 NCBI chr13:28,135,021...28,295,335
Ensembl chr13:28,138,506...28,295,335
JBrowse link
G PATL1 PAT1 homolog 1, processing body mRNA decay factor involved_in IBA
IDA
(PMID:21873635)
(PMID:20584987), (PMID:20852261)
GO_Central
UniProt
PMID:20584987 PMID:20852261 PMID:21873635 NCBI chr11:59,636,716...59,669,037
Ensembl chr11:59,636,716...59,669,037
JBrowse link
G PATL2 PAT1 homolog 2 involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr15:44,665,732...44,711,406
Ensembl chr15:44,665,732...44,711,316
Ensembl chr15:44,665,732...44,711,316
JBrowse link
deadenylation-independent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCP1A decapping mRNA 1A involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:53,283,429...53,347,543
Ensembl chr 3:53,283,429...53,347,586
JBrowse link
G DCP1B decapping mRNA 1B involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:1,941,591...2,004,457
Ensembl chr12:1,946,053...2,004,535
JBrowse link
G EDC3 enhancer of mRNA decapping 3 involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr15:74,630,558...74,696,434
Ensembl chr15:74,630,558...74,696,292
JBrowse link
G EDC4 enhancer of mRNA decapping 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:67,873,052...67,884,499
Ensembl chr16:67,873,052...67,884,499
JBrowse link
G PNRC2 proline rich nuclear receptor coactivator 2 involved_in TAS (PMID:19150429) UniProt PMID:19150429 NCBI chr 1:23,959,164...23,963,462
Ensembl chr 1:23,956,839...23,963,462
JBrowse link
deoxyadenosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:76875|PMID:7592575)
(MGI:1095761|PMID:9272950), (MGI:72798|PMID:7731963)
(MGI:74163|PMID:7670465)
(MGI:2155238|PMID:9478961), (MGI:3619310|PMID:14607964), (MGI:3640719|PMID:10720488)
Ensembl
MGI
PMID:7592575 PMID:7670465 PMID:7731963 PMID:9272950 PMID:9478961 PMID:10720488 PMID:14607964 GO_REF:0000107 MGI:1095761 MGI:2155238 MGI:3619310 MGI:3640719 MGI:72798 MGI:74163 MGI:76875 NCBI chr20:44,619,522...44,651,699
Ensembl chr20:44,619,522...44,652,233
JBrowse link
G PNP purine nucleoside phosphorylase involved_in IDA (PMID:6771276) MGI PMID:6771276 NCBI chr14:20,469,406...20,477,089
Ensembl chr14:20,468,954...20,477,094
Ensembl chr14:20,468,954...20,477,094
JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:31,334,320...31,414,777
Ensembl chr 2:31,334,321...31,414,742
JBrowse link
deoxyguanosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GDA guanine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:72,114,595...72,256,045
Ensembl chr 9:72,114,595...72,257,193
JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:31,334,320...31,414,777
Ensembl chr 2:31,334,321...31,414,742
JBrowse link
deoxyinosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PNP purine nucleoside phosphorylase involved_in IDA (PMID:6771276) MGI PMID:6771276 NCBI chr14:20,469,406...20,477,089
Ensembl chr14:20,468,954...20,477,094
Ensembl chr14:20,468,954...20,477,094
JBrowse link
G XDH xanthine dehydrogenase involved_in IDA (PMID:1619276) MGI PMID:1619276 NCBI chr 2:31,334,320...31,414,777
Ensembl chr 2:31,334,321...31,414,742
JBrowse link
deoxyribonucleoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DERA deoxyribose-phosphate aldolase involved_in IDA (PMID:9226884) UniProt PMID:9226884 NCBI chr12:15,911,332...16,037,381
Ensembl chr12:15,911,302...16,037,381
JBrowse link
deoxyribonucleoside monophosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNPH1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 involved_in ISS
IEA
IDA
IBA
(PMID:25108359)
(PMID:21873635)
UniProt
InterPro
GO_Central
PMID:21873635 PMID:25108359 GO_REF:0000002 GO_REF:0000024 NCBI chr 6:43,225,629...43,229,481
Ensembl chr 6:43,225,629...43,229,484
Ensembl chr 6:43,225,629...43,229,484
JBrowse link
deoxyribonucleoside triphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ITPA inosine triphosphatase involved_in IEA UniProt GO_REF:0000104 NCBI chr20:3,208,676...3,227,449
Ensembl chr20:3,208,868...3,223,870
JBrowse link
deoxyribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DERA deoxyribose-phosphate aldolase involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr12:15,911,332...16,037,381
Ensembl chr12:15,911,302...16,037,381
JBrowse link
G NT5C 5', 3'-nucleotidase, cytosolic involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1353788|PMID:10681516) InterPro
MGI
PMID:10681516 GO_REF:0000002 MGI:1353788 NCBI chr17:75,130,228...75,131,965
Ensembl chr17:75,130,225...75,131,757
JBrowse link
G NT5M 5',3'-nucleotidase, mitochondrial involved_in IEA InterPro GO_REF:0000002 NCBI chr17:17,303,373...17,347,663
Ensembl chr17:17,303,335...17,347,663
JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in TAS
IDA
(PMID:23601106), (PMID:26294762) Reactome
UniProt
PMID:23601106 PMID:26294762 Reactome:R-HSA-8866601 NCBI chr20:36,889,773...36,951,708
Ensembl chr20:36,889,773...36,951,901
Ensembl chr20:36,889,773...36,951,901
Ensembl chr20:36,889,773...36,951,901
JBrowse link
depyrimidination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MBD4 methyl-CpG binding domain 4, DNA glycosylase involved_in TAS Reactome Reactome:R-HSA-110328 Reactome:R-HSA-110329 NCBI chr 3:129,430,947...129,440,029
Ensembl chr 3:129,430,944...129,440,179
Ensembl chr 3:129,430,944...129,440,179
JBrowse link
G NEIL1 nei like DNA glycosylase 1 involved_in TAS Reactome Reactome:R-HSA-110328 Reactome:R-HSA-110329 NCBI chr15:75,346,638...75,357,115
Ensembl chr15:75,346,955...75,357,115
JBrowse link
G NEIL2 nei like DNA glycosylase 2 involved_in TAS Reactome Reactome:R-HSA-110328 Reactome:R-HSA-110329 NCBI chr 8:11,769,710...11,787,345
Ensembl chr 8:11,769,639...11,787,345
JBrowse link
G NTHL1 nth like DNA glycosylase 1 involved_in TAS Reactome Reactome:R-HSA-110328 Reactome:R-HSA-110329 NCBI chr16:2,039,820...2,047,834
Ensembl chr16:2,039,815...2,047,866
JBrowse link
G OGG1 8-oxoguanine DNA glycosylase involved_in TAS Reactome Reactome:R-HSA-110328 Reactome:R-HSA-110329 NCBI chr 3:9,749,952...9,788,246
Ensembl chr 3:9,749,944...9,788,219
JBrowse link
G SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 involved_in TAS Reactome Reactome:R-HSA-110328 Reactome:R-HSA-110329 NCBI chr12:54,121,274...54,188,985
Ensembl chr12:54,121,277...54,189,008
JBrowse link
G TDG thymine DNA glycosylase involved_in TAS Reactome Reactome:R-HSA-110328 Reactome:R-HSA-110329 NCBI chr12:103,965,842...103,988,874
Ensembl chr12:103,965,822...103,988,874
JBrowse link
G UNG uracil DNA glycosylase involved_in TAS Reactome Reactome:R-HSA-110328 Reactome:R-HSA-110329 NCBI chr12:109,097,597...109,110,992
Ensembl chr12:109,097,574...109,110,992
Ensembl chr12:109,097,574...109,110,992
JBrowse link
dGDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT18 nudix hydrolase 18 involved_in IDA (PMID:22556419) UniProt PMID:22556419 NCBI chr 8:22,106,872...22,110,355
Ensembl chr 8:22,106,874...22,109,419
JBrowse link
dGMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GDA guanine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:72,114,595...72,256,045
Ensembl chr 9:72,114,595...72,257,193
JBrowse link
G NT5C 5', 3'-nucleotidase, cytosolic involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:75,130,228...75,131,965
Ensembl chr17:75,130,225...75,131,757
JBrowse link
G NT5C1A 5'-nucleotidase, cytosolic IA involved_in IDA (PMID:11133996) MGI PMID:11133996 NCBI chr 1:39,651,229...39,672,107
Ensembl chr 1:39,659,121...39,672,038
Ensembl chr 1:39,659,121...39,672,038
JBrowse link
G NT5C2 5'-nucleotidase, cytosolic II involved_in ISO (MGI:6478530|PMID:5560407) MGI PMID:5560407 MGI:6478530 NCBI chr10:103,088,017...103,193,301
Ensembl chr10:103,087,185...103,277,605
Ensembl chr10:103,087,185...103,277,605
JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:31,334,320...31,414,777
Ensembl chr 2:31,334,321...31,414,742
JBrowse link
dGTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT15 nudix hydrolase 15 involved_in IBA
IDA
(PMID:21873635)
(PMID:22556419)
GO_Central
UniProt
PMID:21873635 PMID:22556419 NCBI chr13:48,037,726...48,052,755
Ensembl chr13:48,037,726...48,047,221
JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IDA
IBA
(PMID:24217394)
(PMID:21873635)
UniProt
GO_Central
PMID:21873635 PMID:24217394 NCBI chr20:36,889,773...36,951,708
Ensembl chr20:36,889,773...36,951,901
Ensembl chr20:36,889,773...36,951,901
Ensembl chr20:36,889,773...36,951,901
JBrowse link
diadenosine hexaphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT10 nudix hydrolase 10 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:51,332,231...51,337,525
Ensembl chr  X:51,332,231...51,337,525
JBrowse link
G NUDT11 nudix hydrolase 11 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:51,490,011...51,496,592
Ensembl chr  X:51,490,011...51,496,592
JBrowse link
G NUDT3 nudix hydrolase 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:34,279,679...34,392,669
Ensembl chr 6:34,279,679...34,392,669
JBrowse link
G NUDT4 nudix hydrolase 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:93,377,925...93,408,146
Ensembl chr12:93,377,883...93,408,146
JBrowse link
G NUDT4B nudix hydrolase 4B involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:148,748,774...148,752,415
Ensembl chr 1:148,748,894...148,750,099
Ensembl chr 1:148,748,894...148,750,099
JBrowse link
diadenosine pentaphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT10 nudix hydrolase 10 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:51,332,231...51,337,525
Ensembl chr  X:51,332,231...51,337,525
JBrowse link
G NUDT11 nudix hydrolase 11 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:51,490,011...51,496,592
Ensembl chr  X:51,490,011...51,496,592
JBrowse link
G NUDT3 nudix hydrolase 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:34,279,679...34,392,669
Ensembl chr 6:34,279,679...34,392,669
JBrowse link
G NUDT4 nudix hydrolase 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:93,377,925...93,408,146
Ensembl chr12:93,377,883...93,408,146
JBrowse link
G NUDT4B nudix hydrolase 4B involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:148,748,774...148,752,415
Ensembl chr 1:148,748,894...148,750,099
Ensembl chr 1:148,748,894...148,750,099
JBrowse link
diadenosine polyphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT3 nudix hydrolase 3 involved_in TAS (PMID:10419486) PINC PMID:10419486 NCBI chr 6:34,279,679...34,392,669
Ensembl chr 6:34,279,679...34,392,669
JBrowse link
diadenosine triphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FHIT fragile histidine triad diadenosine triphosphatase involved_in IDA
ISO
IBA
(PMID:8794732)
(PMID:21873635)
UniProt
RGD
GO_Central
PMID:8794732 PMID:16359767 PMID:21873635 RGD:2289929 NCBI chr 3:59,747,277...61,251,452
Ensembl chr 3:59,747,277...61,251,459
JBrowse link
dITP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT16 nudix hydrolase 16 involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:5009783|PMID:20081199) UniProt
MGI
PMID:20081199 GO_REF:0000024 MGI:5009783 NCBI chr 3:131,381,671...131,388,830
Ensembl chr 3:131,381,671...131,388,830
JBrowse link
DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DFFB DNA fragmentation factor subunit beta involved_in IMP (PMID:19944011) CAFA PMID:19944011 NCBI chr 1:3,857,286...3,885,429
Ensembl chr 1:3,857,267...3,885,429
JBrowse link
G DNASE1 deoxyribonuclease 1 involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr16:3,611,737...3,665,472
Ensembl chr16:3,611,728...3,680,143
JBrowse link
G DNASE1L1 deoxyribonuclease 1 like 1 involved_in IBA
IEA
(PMID:21873635) GO_Central
InterPro
PMID:21873635 GO_REF:0000002 NCBI chr  X:154,401,236...154,412,101
Ensembl chr  X:154,401,236...154,412,112
JBrowse link
G DNASE1L2 deoxyribonuclease 1 like 2 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(MGI:5308183|PMID:21307874)
(PMID:21873635)
InterPro
MGI
GO_Central
PMID:21307874 PMID:21873635 GO_REF:0000002 MGI:5308183 NCBI chr16:2,236,444...2,238,711
Ensembl chr16:2,235,816...2,238,711
JBrowse link
G DNASE1L3 deoxyribonuclease 1 like 3 involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr 3:58,192,257...58,210,972
Ensembl chr 3:58,192,257...58,214,697
JBrowse link
G DNASE2 deoxyribonuclease 2, lysosomal acts_upstream_of_or_within ISO (MGI:3521632|PMID:15568025) MGI PMID:15568025 MGI:3521632 NCBI chr19:12,875,209...12,881,449
Ensembl chr19:12,875,209...12,881,466
JBrowse link
G TREX1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (MGI:5637600|PMID:25848017)
(MGI:3834787|PMID:18724932), (MGI:4414715|PMID:19923437), (MGI:5562498|PMID:23993650)
(MGI:4848004|PMID:20871604)
MGI PMID:18724932 PMID:19923437 PMID:20871604 PMID:23993650 PMID:25848017 MGI:3834787 MGI:4414715 MGI:4848004 MGI:5562498 MGI:5637600 NCBI chr 3:48,465,830...48,467,645
Ensembl chr 3:48,465,811...48,467,645
JBrowse link
DNA catabolic process, endonucleolytic term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNASE1 deoxyribonuclease 1 involved_in ISS
IBA
(PMID:29191910)
(PMID:21873635)
UniProt
GO_Central
PMID:21873635 PMID:29191910 NCBI chr16:3,611,737...3,665,472
Ensembl chr16:3,611,728...3,680,143
JBrowse link
G DNASE1L1 deoxyribonuclease 1 like 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:154,401,236...154,412,101
Ensembl chr  X:154,401,236...154,412,112
JBrowse link
G DNASE1L2 deoxyribonuclease 1 like 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:2,236,444...2,238,711
Ensembl chr16:2,235,816...2,238,711
JBrowse link
G DNASE1L3 deoxyribonuclease 1 like 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:58,192,257...58,210,972
Ensembl chr 3:58,192,257...58,214,697
JBrowse link
G DNASE2 deoxyribonuclease 2, lysosomal acts_upstream_of_or_within ISO (MGI:3818215|PMID:18991290) MGI PMID:18991290 MGI:3818215 NCBI chr19:12,875,209...12,881,449
Ensembl chr19:12,875,209...12,881,466
JBrowse link
G FBH1 F-box DNA helicase 1 acts_upstream_of_or_within IMP (PMID:23361013) MGI PMID:23361013 NCBI chr10:5,889,572...5,937,593
Ensembl chr10:5,890,203...5,937,594
JBrowse link
G MUS81 MUS81 structure-specific endonuclease subunit acts_upstream_of_or_within IMP (PMID:23361013) MGI PMID:23361013 NCBI chr11:65,860,244...65,867,653
Ensembl chr11:65,857,126...65,867,653
JBrowse link
G REXO4 REX4 homolog, 3'-5' exonuclease involved_in IBA
IDA
(PMID:21873635)
(PMID:21602889)
GO_Central
ARUK-UCL
PMID:21602889 PMID:21873635 NCBI chr 9:133,406,058...133,418,172
Ensembl chr 9:133,406,059...133,418,096
JBrowse link
G SETMAR SET domain and mariner transposase fusion gene involved_in IDA
IMP
(PMID:20521842), (PMID:21491884)
(PMID:24573677)
UniProt PMID:20521842 PMID:21491884 PMID:24573677 NCBI chr 3:4,303,304...4,320,649
Ensembl chr 3:4,303,304...4,317,567
JBrowse link
DNA catabolic process, exonucleolytic term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ISG20 interferon stimulated exonuclease gene 20 involved_in IDA
IBA
(PMID:11401564)
(PMID:21873635)
UniProt
GO_Central
PMID:11401564 PMID:21873635 NCBI chr15:88,635,614...88,656,483
Ensembl chr15:88,636,153...88,656,483
Ensembl chr15:88,636,153...88,656,483
JBrowse link
G REXO4 REX4 homolog, 3'-5' exonuclease involved_in IDA
IBA
(PMID:21602889)
(PMID:21873635)
ARUK-UCL
GO_Central
PMID:21602889 PMID:21873635 NCBI chr 9:133,406,058...133,418,172
Ensembl chr 9:133,406,059...133,418,096
JBrowse link
G TREX1 three prime repair exonuclease 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:48,465,830...48,467,645
Ensembl chr 3:48,465,811...48,467,645
JBrowse link
G TREX2 three prime repair exonuclease 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:153,444,473...153,446,056
Ensembl chr  X:153,444,720...153,470,587
Ensembl chr  X:153,444,720...153,470,587
JBrowse link
G XRN2 5'-3' exoribonuclease 2 involved_in IDA (PMID:15565158) UniProt PMID:15565158 NCBI chr20:21,303,313...21,389,825
Ensembl chr20:21,303,331...21,389,825
JBrowse link
DNA replication, removal of RNA primer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNA2 DNA replication helicase/nuclease 2 involved_in IDA (PMID:18995831) UniProt PMID:18995831 NCBI chr10:68,414,064...68,472,521
Ensembl chr10:68,414,064...68,472,121
JBrowse link
G FEN1 flap structure-specific endonuclease 1 involved_in IDA (PMID:18995831) UniProt PMID:18995831 NCBI chr11:61,792,911...61,797,238
Ensembl chr11:61,792,911...61,797,238
JBrowse link
G RNASEH1 ribonuclease H1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:3,531,813...3,558,367
Ensembl chr 2:3,541,430...3,558,333
JBrowse link
G RNASEH2A ribonuclease H2 subunit A involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr19:12,806,584...12,813,640
Ensembl chr19:12,806,556...12,815,201
Ensembl chr19:12,806,556...12,815,201
JBrowse link
dTMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5C 5', 3'-nucleotidase, cytosolic involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:75,130,228...75,131,965
Ensembl chr17:75,130,225...75,131,757
JBrowse link
G TYMP thymidine phosphorylase involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:50,525,752...50,530,085
Ensembl chr22:50,525,752...50,530,032
JBrowse link
G UPP1 uridine phosphorylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:48,088,308...48,108,736
Ensembl chr 7:48,088,628...48,108,736
JBrowse link
dTTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTPP1 dCTP pyrophosphatase 1 NOT|involved_in IMP (PMID:24467396) UniProt PMID:24467396 NCBI chr16:30,423,615...30,430,030
Ensembl chr16:30,423,615...30,430,030
JBrowse link
dUMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5C 5', 3'-nucleotidase, cytosolic involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:75,130,228...75,131,965
Ensembl chr17:75,130,225...75,131,757
JBrowse link
G NT5M 5',3'-nucleotidase, mitochondrial involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2388903|PMID:12234672) Ensembl
MGI
PMID:12234672 GO_REF:0000107 MGI:2388903 NCBI chr17:17,303,373...17,347,663
Ensembl chr17:17,303,335...17,347,663
JBrowse link
G UPP1 uridine phosphorylase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:48,088,308...48,108,736
Ensembl chr 7:48,088,628...48,108,736
JBrowse link
dUTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AL353753.1 putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:26,066,675...26,118,408
Ensembl chr 9:26,066,675...26,118,408
JBrowse link
G DUT deoxyuridine triphosphatase involved_in IEA
ISO
IBA
(PMID:21873635) UniProt
RGD
GO_Central
PMID:1315924 PMID:3032103 PMID:21873635 GO_REF:0000104 RGD:2300191 RGD:2301218 NCBI chr15:48,329,991...48,343,373
Ensembl chr15:48,331,011...48,343,373
JBrowse link
exonucleolytic catabolism of deadenylated mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT6 CCR4-NOT transcription complex subunit 6 involved_in IDA (PMID:20065043) UniProt PMID:20065043 NCBI chr 5:180,494,373...180,578,358
Ensembl chr 5:180,494,379...180,578,358
JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in IDA
IBA
(PMID:20065043), (PMID:21336257)
(PMID:21873635)
UniProt
GO_Central
PMID:20065043 PMID:21336257 PMID:21873635 NCBI chr 8:17,221,981...17,246,857
Ensembl chr 8:17,224,966...17,246,878
JBrowse link
G CNOT8 CCR4-NOT transcription complex subunit 8 involved_in IDA
IBA
(PMID:20065043)
(PMID:21873635)
UniProt
GO_Central
PMID:20065043 PMID:21873635 NCBI chr 5:154,857,952...154,876,792
Ensembl chr 5:154,857,553...154,876,793
Ensembl chr 5:154,857,553...154,876,793
JBrowse link
G DCP1A decapping mRNA 1A involved_in TAS Reactome Reactome:R-HSA-430039 NCBI chr 3:53,283,429...53,347,543
Ensembl chr 3:53,283,429...53,347,586
JBrowse link
G DCP1B decapping mRNA 1B involved_in TAS Reactome Reactome:R-HSA-430039 NCBI chr12:1,941,591...2,004,457
Ensembl chr12:1,946,053...2,004,535
JBrowse link
G DCP2 decapping mRNA 2 involved_in TAS Reactome Reactome:R-HSA-430039 NCBI chr 5:112,976,702...113,022,195
Ensembl chr 5:112,976,702...113,022,195
JBrowse link
G DCPS decapping enzyme, scavenger involved_in TAS Reactome Reactome:R-HSA-429958 NCBI chr11:126,304,060...126,350,005
Ensembl chr11:126,304,060...126,350,005
JBrowse link
G DDX6 DEAD-box helicase 6 involved_in TAS Reactome Reactome:R-HSA-430039 NCBI chr11:118,747,763...118,791,696
Ensembl chr11:118,747,763...118,791,164
JBrowse link
G DIS3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease involved_in TAS Reactome Reactome:R-HSA-429958 NCBI chr13:72,752,169...72,781,900
Ensembl chr13:72,752,169...72,782,096
JBrowse link
G EDC3 enhancer of mRNA decapping 3 involved_in TAS Reactome Reactome:R-HSA-430039 NCBI chr15:74,630,558...74,696,434
Ensembl chr15:74,630,558...74,696,292
JBrowse link
G EDC4 enhancer of mRNA decapping 4 involved_in TAS Reactome Reactome:R-HSA-430039 NCBI chr16:67,873,052...67,884,499
Ensembl chr16:67,873,052...67,884,499
JBrowse link
G EXOSC1 exosome component 1 involved_in TAS Reactome Reactome:R-HSA-429958 NCBI chr10:97,435,909...97,446,006
Ensembl chr10:97,435,909...97,446,017
JBrowse link
G EXOSC2 exosome component 2 involved_in TAS
IBA
(PMID:21873635) Reactome
GO_Central
PMID:21873635 Reactome:R-HSA-429958 NCBI chr 9:130,693,760...130,704,894
Ensembl chr 9:130,693,721...130,704,894
JBrowse link
G EXOSC3 exosome component 3 involved_in TAS
IMP
IBA
(PMID:11782436)
(PMID:21873635)
Reactome
UniProt
GO_Central
PMID:11782436 PMID:21873635 Reactome:R-HSA-429958 NCBI chr 9:37,779,714...37,785,092
Ensembl chr 9:37,766,978...37,801,437
Ensembl chr 9:37,766,978...37,801,437
JBrowse link
G EXOSC4 exosome component 4 involved_in TAS Reactome Reactome:R-HSA-429958 NCBI chr 8:144,064,061...144,080,648
Ensembl chr 8:144,078,648...144,080,648
JBrowse link
G EXOSC5 exosome component 5 involved_in IMP
TAS
(PMID:11782436) UniProt
Reactome
PMID:11782436 Reactome:R-HSA-429958 NCBI chr19:41,386,374...41,397,359
Ensembl chr19:41,386,374...41,397,359
JBrowse link
G EXOSC6 exosome component 6 involved_in TAS Reactome Reactome:R-HSA-429958 NCBI chr16:70,246,778...70,251,940
Ensembl chr16:70,246,778...70,251,940
JBrowse link
G EXOSC7 exosome component 7 involved_in TAS
IBA
(PMID:21873635) Reactome
GO_Central
PMID:21873635 Reactome:R-HSA-429958 NCBI chr 3:44,975,291...45,012,668
Ensembl chr 3:44,975,241...45,036,066
JBrowse link
G EXOSC8 exosome component 8 involved_in IBA
TAS
(PMID:21873635) GO_Central
Reactome
PMID:21873635 Reactome:R-HSA-429958 NCBI chr13:37,000,373...37,009,614
Ensembl chr13:36,998,816...37,009,614
JBrowse link
G EXOSC9 exosome component 9 involved_in IMP
TAS
IBA
(PMID:11782436)
(PMID:21873635)
UniProt
Reactome
GO_Central
PMID:11782436 PMID:21873635 Reactome:R-HSA-429958 NCBI chr 4:121,801,323...121,817,021
Ensembl chr 4:121,801,317...121,817,021
Ensembl chr 4:121,801,317...121,817,021
JBrowse link
G HBS1L HBS1 like translational GTPase involved_in TAS Reactome Reactome:R-HSA-429958 NCBI chr 6:134,960,378...135,054,826
Ensembl chr 6:134,960,378...135,103,056
JBrowse link
G LSM1 LSM1 homolog, mRNA degradation associated involved_in TAS Reactome Reactome:R-HSA-430039 NCBI chr 8:38,163,321...38,176,730
Ensembl chr 8:38,163,335...38,176,730
JBrowse link
G LSM2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in TAS Reactome Reactome:R-HSA-430039 NCBI chr 6:31,797,396...31,806,966
Ensembl chr 6:31,797,396...31,806,966
JBrowse link
G LSM3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in TAS Reactome Reactome:R-HSA-430039 NCBI chr 3:14,178,817...14,201,122
Ensembl chr 3:14,178,817...14,201,122
JBrowse link
G LSM4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in TAS Reactome Reactome:R-HSA-430039 NCBI chr19:18,306,236...18,323,076
Ensembl chr19:18,306,230...18,323,274
Ensembl chr19:18,306,230...18,323,274
JBrowse link
G LSM5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in TAS Reactome Reactome:R-HSA-430039 NCBI chr 7:32,485,338...32,495,283
Ensembl chr 7:32,485,338...32,495,283
JBrowse link
G LSM6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in TAS Reactome Reactome:R-HSA-430039 NCBI chr 4:146,175,703...146,204,436
Ensembl chr 4:146,175,703...146,200,000
JBrowse link
G LSM7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in TAS Reactome Reactome:R-HSA-430039 NCBI chr19:2,321,521...2,328,630
Ensembl chr19:2,321,520...2,328,611
JBrowse link
G NT5C3B 5'-nucleotidase, cytosolic IIIB involved_in TAS Reactome Reactome:R-HSA-429958 NCBI chr17:41,825,057...41,836,276
Ensembl chr17:41,825,057...41,836,260
JBrowse link
G PATL1 PAT1 homolog 1, processing body mRNA decay factor involved_in TAS Reactome Reactome:R-HSA-430039 NCBI chr11:59,636,716...59,669,037
Ensembl chr11:59,636,716...59,669,037
JBrowse link
G SKIV2L Ski2 like RNA helicase involved_in TAS Reactome Reactome:R-HSA-429958 NCBI chr 6:31,959,157...31,969,852
Ensembl chr 6:31,959,117...31,969,751
JBrowse link
G TTC37 tetratricopeptide repeat domain 37 involved_in TAS Reactome Reactome:R-HSA-429958 NCBI chr 5:95,463,894...95,554,980
Ensembl chr 5:95,461,755...95,555,007
Ensembl chr 5:95,461,755...95,555,007
JBrowse link
G WDR61 WD repeat domain 61 involved_in TAS Reactome Reactome:R-HSA-429958 NCBI chr15:78,283,233...78,299,703
Ensembl chr15:78,277,835...78,299,703
JBrowse link
fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FITM2 fat storage inducing transmembrane protein 2 involved_in IMP (PMID:32915949) UniProt PMID:32915949 NCBI chr20:44,302,840...44,311,202
Ensembl chr20:44,302,840...44,311,202
JBrowse link
flavin adenine dinucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G VCP valosin containing protein involved_in IMP (PMID:23498975) ParkinsonsUK-UCL PMID:23498975 NCBI chr 9:35,056,064...35,072,625
Ensembl chr 9:35,056,064...35,072,627
Ensembl chr 9:35,056,064...35,072,627
Ensembl chr 9:35,056,064...35,072,627
JBrowse link
folic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTHFS methenyltetrahydrofolate synthetase involved_in IMP (PMID:12764149) BHF-UCL PMID:12764149 NCBI chr15:79,843,547...79,897,285
Ensembl chr15:79,833,585...79,897,379
JBrowse link
G PM20D2 peptidase M20 domain containing 2 NOT|involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:89,094,818...89,165,565
Ensembl chr 6:89,146,055...89,165,565
JBrowse link
GDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 involved_in IDA (PMID:10858452) UniProt PMID:10858452 NCBI chr 8:23,429,162...23,457,647
Ensembl chr 8:23,385,783...23,457,695
JBrowse link
G NUDT18 nudix hydrolase 18 involved_in IDA (PMID:22556419) UniProt PMID:22556419 NCBI chr 8:22,106,872...22,110,355
Ensembl chr 8:22,106,874...22,109,419
JBrowse link
GMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GDA guanine deaminase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:72,114,595...72,256,045
Ensembl chr 9:72,114,595...72,257,193
JBrowse link
G HPRT1 hypoxanthine phosphoribosyltransferase 1 involved_in IDA (PMID:19527031) UniProt PMID:19527031 NCBI chr  X:134,460,165...134,500,668
Ensembl chr  X:134,460,165...134,520,513
JBrowse link
G PRTFDC1 phosphoribosyl transferase domain containing 1 NOT|involved_in IDA (PMID:21054786) UniProt PMID:21054786 NCBI chr10:24,848,614...24,952,606
Ensembl chr10:24,848,614...24,952,606
JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:31,334,320...31,414,777
Ensembl chr 2:31,334,321...31,414,742
JBrowse link
guanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GDA guanine deaminase involved_in IEA InterPro
UniProt
GO_REF:0000002 GO_REF:0000041 NCBI chr 9:72,114,595...72,256,045
Ensembl chr 9:72,114,595...72,257,193
JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:31,334,320...31,414,777
Ensembl chr 2:31,334,321...31,414,742
JBrowse link
heme catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCC1 ATP binding cassette subfamily C member 1 involved_in TAS Reactome Reactome:R-HSA-189483 NCBI chr16:15,949,616...16,143,062
Ensembl chr16:15,949,577...16,143,074
Ensembl chr16:15,949,577...16,143,074
JBrowse link
G ABCC2 ATP binding cassette subfamily C member 2 involved_in TAS Reactome Reactome:R-HSA-189483 NCBI chr10:99,782,602...99,853,741
Ensembl chr10:99,782,640...99,852,594
JBrowse link
G ABCG2 ATP binding cassette subfamily G member 2 (Junior blood group) involved_in TAS Reactome Reactome:R-HSA-189483 NCBI chr 4:88,090,264...88,231,626
Ensembl chr 4:88,090,150...88,231,628
JBrowse link
G ALB albumin involved_in TAS Reactome Reactome:R-HSA-189483 NCBI chr 4:73,404,287...73,421,482
Ensembl chr 4:73,397,114...73,421,482
JBrowse link
G AMBP alpha-1-microglobulin/bikunin precursor involved_in NAS (PMID:11877257) UniProt PMID:11877257 NCBI chr 9:114,060,127...114,078,300
Ensembl chr 9:114,060,127...114,078,328
JBrowse link
G BLVRA biliverdin reductase A involved_in IDA
TAS
(PMID:10858451) UniProt
Reactome
PMID:10858451 Reactome:R-HSA-189483 NCBI chr 7:43,758,122...43,807,342
Ensembl chr 7:43,758,680...43,807,342
JBrowse link
G BLVRB biliverdin reductase B involved_in TAS
IDA
(PMID:7929092) Reactome
UniProt
PMID:7929092 Reactome:R-HSA-189483 NCBI chr19:40,447,768...40,465,745
Ensembl chr19:40,447,765...40,465,764
JBrowse link
G FABP1 fatty acid binding protein 1 involved_in TAS Reactome Reactome:R-HSA-189483 NCBI chr 2:88,122,982...88,128,062
Ensembl chr 2:88,122,982...88,128,062
JBrowse link
G GSTA1 glutathione S-transferase alpha 1 involved_in TAS Reactome Reactome:R-HSA-189483 NCBI chr 6:52,791,371...52,803,827
Ensembl chr 6:52,791,371...52,803,860
JBrowse link
G HMOX1 heme oxygenase 1 involved_in IDA
ISO
IBA
TAS
(PMID:17915953)
(PMID:21873635)
BHF-UCL
RGD
GO_Central
Reactome
PMID:15226268 PMID:17915953 PMID:21873635 RGD:1547877 Reactome:R-HSA-189483 NCBI chr22:35,381,096...35,394,207
Ensembl chr22:35,380,361...35,394,207
Ensembl chr22:35,380,361...35,394,207
JBrowse link
G HMOX2 heme oxygenase 2 involved_in TAS
IBA
(PMID:21873635) Reactome
GO_Central
PMID:21873635 Reactome:R-HSA-189483 NCBI chr16:4,474,697...4,510,347
Ensembl chr16:4,474,690...4,510,347
JBrowse link
G SLCO1B1 solute carrier organic anion transporter family member 1B1 involved_in TAS Reactome Reactome:R-HSA-189483 NCBI chr12:21,131,194...21,239,796
Ensembl chr12:21,131,194...21,239,796
JBrowse link
G SLCO1B3 solute carrier organic anion transporter family member 1B3 involved_in TAS Reactome Reactome:R-HSA-189483 NCBI chr12:20,810,705...20,916,911
Ensembl chr12:20,810,702...20,916,911
JBrowse link
G SLCO2B1 solute carrier organic anion transporter family member 2B1 involved_in TAS Reactome Reactome:R-HSA-189483 NCBI chr11:75,151,107...75,206,549
Ensembl chr11:75,100,563...75,206,549
JBrowse link
G UGT1A1 UDP glucuronosyltransferase family 1 member A1 involved_in TAS Reactome Reactome:R-HSA-189483 NCBI chr 2:233,760,270...233,773,300
Ensembl chr 2:233,760,270...233,773,300
Ensembl chr 2:233,760,270...233,773,300
JBrowse link
G UGT1A4 UDP glucuronosyltransferase family 1 member A4 involved_in TAS Reactome Reactome:R-HSA-189483 NCBI chr 2:233,718,736...233,773,300
Ensembl chr 2:233,718,778...233,773,299
Ensembl chr 2:233,718,778...233,773,299
JBrowse link
heme oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HMOX1 heme oxygenase 1 involved_in IEA
IDA
IBA
(PMID:17915953)
(PMID:21873635)
InterPro
BHF-UCL
GO_Central
PMID:17915953 PMID:21873635 GO_REF:0000002 NCBI chr22:35,381,096...35,394,207
Ensembl chr22:35,380,361...35,394,207
Ensembl chr22:35,380,361...35,394,207
JBrowse link
G HMOX2 heme oxygenase 2 involved_in IEA
IBA
(PMID:21873635) InterPro
GO_Central
PMID:21873635 GO_REF:0000002 NCBI chr16:4,474,697...4,510,347
Ensembl chr16:4,474,690...4,510,347
JBrowse link
histamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNMT histamine N-methyltransferase involved_in IDA (PMID:26206890) UniProt PMID:26206890 NCBI chr 2:137,964,068...138,016,364
Ensembl chr 2:137,964,020...138,016,364
JBrowse link
histone mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase involved_in IDA (PMID:16086026) UniProt PMID:16086026 NCBI chr11:108,222,484...108,369,102
Ensembl chr11:108,222,832...108,369,102
Ensembl chr11:108,222,832...108,369,102
Ensembl chr11:108,222,832...108,369,102
JBrowse link
G DCP2 decapping mRNA 2 involved_in IMP (PMID:18172165) UniProt PMID:18172165 NCBI chr 5:112,976,702...113,022,195
Ensembl chr 5:112,976,702...113,022,195
JBrowse link
G ERI1 exoribonuclease 1 NOT|involved_in IMP (PMID:18172165) UniProt PMID:18172165 NCBI chr 8:8,892,225...9,100,262
Ensembl chr 8:9,002,147...9,116,746
JBrowse link
G EXOSC10 exosome component 10 involved_in IBA
IMP
(PMID:21873635)
(PMID:18172165)
GO_Central
UniProt
PMID:18172165 PMID:21873635 NCBI chr 1:11,066,613...11,099,869
Ensembl chr 1:11,066,618...11,099,869
JBrowse link
G EXOSC4 exosome component 4 involved_in IMP (PMID:18172165) UniProt PMID:18172165 NCBI chr 8:144,064,061...144,080,648
Ensembl chr 8:144,078,648...144,080,648
JBrowse link
G LSM1 LSM1 homolog, mRNA degradation associated involved_in IMP (PMID:18172165) UniProt PMID:18172165 NCBI chr 8:38,163,321...38,176,730
Ensembl chr 8:38,163,335...38,176,730
JBrowse link
G MTPAP mitochondrial poly(A) polymerase involved_in IMP (PMID:18172165) UniProt PMID:18172165 NCBI chr10:30,309,801...30,349,278
Ensembl chr10:30,309,801...30,374,448
JBrowse link
G TENT2 terminal nucleotidyltransferase 2 involved_in IMP (PMID:18172165) UniProt PMID:18172165 NCBI chr 5:79,612,421...79,688,246
Ensembl chr 5:79,612,120...79,686,648
Ensembl chr 5:79,612,120...79,686,648
JBrowse link
G TENT4B terminal nucleotidyltransferase 4B involved_in IMP (PMID:18172165) UniProt PMID:18172165 NCBI chr16:50,152,911...50,235,310
Ensembl chr16:50,152,911...50,235,310
Ensembl chr16:50,152,911...50,235,310
JBrowse link
G TUT1 terminal uridylyl transferase 1, U6 snRNA-specific NOT|involved_in IMP (PMID:18172165) UniProt PMID:18172165 NCBI chr11:62,575,052...62,591,523
Ensembl chr11:62,575,045...62,591,637
Ensembl chr11:62,575,045...62,591,637
JBrowse link
G TUT4 terminal uridylyl transferase 4 NOT|involved_in IMP (PMID:18172165) UniProt PMID:18172165 NCBI chr 1:52,423,275...52,553,463
Ensembl chr 1:52,408,282...52,553,487
JBrowse link
G TUT7 terminal uridylyl transferase 7 NOT|involved_in IMP (PMID:18172165) UniProt PMID:18172165 NCBI chr 9:86,287,733...86,354,497
Ensembl chr 9:86,287,733...86,354,454
JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in IMP (PMID:16086026) UniProt PMID:16086026 NCBI chr19:18,831,405...18,868,230
Ensembl chr19:18,831,938...18,868,236
Ensembl chr19:18,831,938...18,868,236
JBrowse link
G XRN1 5'-3' exoribonuclease 1 involved_in IMP (PMID:18172165) UniProt PMID:18172165 NCBI chr 3:142,306,610...142,448,062
Ensembl chr 3:142,306,607...142,448,062
JBrowse link
hypoxanthine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G XDH xanthine dehydrogenase involved_in ISO
IDA
(PMID:1619276) RGD
MGI
PMID:232638 PMID:1619276 RGD:13210503 NCBI chr 2:31,334,320...31,414,777
Ensembl chr 2:31,334,321...31,414,742
JBrowse link
IDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT16 nudix hydrolase 16 involved_in IDA (PMID:20385596) UniProt PMID:20385596 NCBI chr 3:131,381,671...131,388,830
Ensembl chr 3:131,381,671...131,388,830
JBrowse link
G NUDT9 nudix hydrolase 9 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2158549|PMID:11825615) Ensembl
MGI
PMID:11825615 GO_REF:0000107 MGI:2158549 NCBI chr 4:87,420,002...87,459,455
Ensembl chr 4:87,422,573...87,459,455
JBrowse link
IMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5C 5', 3'-nucleotidase, cytosolic involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:75,130,228...75,131,965
Ensembl chr17:75,130,225...75,131,757
JBrowse link
G NT5C1A 5'-nucleotidase, cytosolic IA involved_in IDA (PMID:11133996) MGI PMID:11133996 NCBI chr 1:39,651,229...39,672,107
Ensembl chr 1:39,659,121...39,672,038
Ensembl chr 1:39,659,121...39,672,038
JBrowse link
G NT5C2 5'-nucleotidase, cytosolic II involved_in IDA (PMID:21873433) MGI PMID:21873433 NCBI chr10:103,088,017...103,193,301
Ensembl chr10:103,087,185...103,277,605
Ensembl chr10:103,087,185...103,277,605
JBrowse link
G PNP purine nucleoside phosphorylase involved_in IDA (PMID:6771276) MGI PMID:6771276 NCBI chr14:20,469,406...20,477,089
Ensembl chr14:20,468,954...20,477,094
Ensembl chr14:20,468,954...20,477,094
JBrowse link
G XDH xanthine dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:31,334,320...31,414,777
Ensembl chr 2:31,334,321...31,414,742
JBrowse link
inosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PNP purine nucleoside phosphorylase involved_in
acts_upstream_of_or_within
IDA (PMID:23438750)
(PMID:16964310)
UniProt
MGI
PMID:16964310 PMID:23438750 NCBI chr14:20,469,406...20,477,089
Ensembl chr14:20,468,954...20,477,094
Ensembl chr14:20,468,954...20,477,094
JBrowse link
G XDH xanthine dehydrogenase involved_in IDA (PMID:1619276) MGI PMID:1619276 NCBI chr 2:31,334,320...31,414,777
Ensembl chr 2:31,334,321...31,414,742
JBrowse link
ITP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ITPA inosine triphosphatase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5009783|PMID:20081199) Ensembl
MGI
PMID:20081199 GO_REF:0000107 MGI:5009783 NCBI chr20:3,208,676...3,227,449
Ensembl chr20:3,208,868...3,223,870
JBrowse link
long-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOT7 acyl-CoA thioesterase 7 involved_in IDA (PMID:10578051) BHF-UCL PMID:10578051 NCBI chr 1:6,264,272...6,393,767
Ensembl chr 1:6,264,269...6,394,391
Ensembl chr 1:6,264,269...6,394,391
JBrowse link
malonyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MLYCD malonyl-CoA decarboxylase involved_in IDA
IBA
(PMID:10417274), (PMID:10455107), (PMID:15003260)
(PMID:21873635)
UniProt
GO_Central
PMID:10417274 PMID:10455107 PMID:15003260 PMID:21873635 NCBI chr16:83,899,115...83,927,031
Ensembl chr16:83,899,115...83,951,445
JBrowse link
medium-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOT7 acyl-CoA thioesterase 7 involved_in IDA (PMID:10578051) BHF-UCL PMID:10578051 NCBI chr 1:6,264,272...6,393,767
Ensembl chr 1:6,264,269...6,394,391
Ensembl chr 1:6,264,269...6,394,391
JBrowse link
G NUDT7 nudix hydrolase 7 involved_in ISS UniProt GO_REF:0000024 NCBI chr16:77,722,514...77,742,260
Ensembl chr16:77,722,492...77,742,260
JBrowse link
miRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DIS3L2 DIS3 like 3'-5' exoribonuclease 2 involved_in IDA
ISS
IBA
(PMID:24141620)
(PMID:21873635)
UniProt
GO_Central
PMID:21873635 PMID:24141620 GO_REF:0000024 NCBI chr 2:231,961,713...232,344,350
Ensembl chr 2:231,961,245...232,344,350
JBrowse link
G LIN28A lin-28 homolog A involved_in IMP (PMID:18951094), (PMID:19703396) UniProt PMID:18951094 PMID:19703396 NCBI chr 1:26,410,778...26,429,728
Ensembl chr 1:26,410,817...26,429,728
JBrowse link
G LIN28B lin-28 homolog B involved_in IMP (PMID:19703396) UniProt PMID:19703396 NCBI chr 6:104,936,999...105,083,332
Ensembl chr 6:104,936,616...105,083,332
JBrowse link
G PARN poly(A)-specific ribonuclease involved_in IDA (PMID:25049417) UniProt PMID:25049417 NCBI chr16:14,435,701...14,630,286
Ensembl chr16:14,435,700...14,632,728
JBrowse link
G SND1 staphylococcal nuclease and tudor domain containing 1 involved_in IDA (PMID:28546213) UniProt PMID:28546213 NCBI chr 7:127,652,145...128,092,593
Ensembl chr 7:127,652,194...128,092,609
JBrowse link
G TENT4B terminal nucleotidyltransferase 4B involved_in IDA (PMID:25049417) UniProt PMID:25049417 NCBI chr16:50,152,911...50,235,310
Ensembl chr16:50,152,911...50,235,310
Ensembl chr16:50,152,911...50,235,310
JBrowse link
G TUT4 terminal uridylyl transferase 4 involved_in IMP (PMID:19703396) UniProt PMID:19703396 NCBI chr 1:52,423,275...52,553,463
Ensembl chr 1:52,408,282...52,553,487
JBrowse link
mitochondrial mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDE12 phosphodiesterase 12 involved_in IMP (PMID:21245038), (PMID:21666256) UniProt PMID:21245038 PMID:21666256 NCBI chr 3:57,556,274...57,656,495
Ensembl chr 3:57,556,274...57,566,848
JBrowse link
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in IDA
IBA
(PMID:20691904)
(PMID:21873635)
UniProt
GO_Central
PMID:20691904 PMID:21873635 NCBI chr 2:55,634,061...55,693,853
Ensembl chr 2:55,634,061...55,693,863
JBrowse link
G SUPV3L1 Suv3 like RNA helicase involved_in IMP (PMID:19864255) UniProt PMID:19864255 NCBI chr10:69,180,234...69,209,093
Ensembl chr10:69,180,234...69,209,099
JBrowse link
mitochondrial mRNA surveillance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SUPV3L1 Suv3 like RNA helicase involved_in IMP (PMID:19864255) UniProt PMID:19864255 NCBI chr10:69,180,234...69,209,093
Ensembl chr10:69,180,234...69,209,099
JBrowse link
mitochondrial ncRNA surveillance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SUPV3L1 Suv3 like RNA helicase involved_in IMP (PMID:19864255) UniProt PMID:19864255 NCBI chr10:69,180,234...69,209,093
Ensembl chr10:69,180,234...69,209,099
JBrowse link
mitochondrial RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in IDA (PMID:18501193) UniProt PMID:18501193 NCBI chr 2:55,634,061...55,693,853
Ensembl chr 2:55,634,061...55,693,863
JBrowse link
mitochondrial RNA surveillance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SUPV3L1 Suv3 like RNA helicase involved_in IMP (PMID:19864255) UniProt PMID:19864255 NCBI chr10:69,180,234...69,209,093
Ensembl chr10:69,180,234...69,209,099
JBrowse link
mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO3 argonaute RISC catalytic component 3 involved_in IDA (PMID:18771919) UniProt PMID:18771919 NCBI chr 1:35,925,683...36,072,500
Ensembl chr 1:35,930,718...36,072,500
JBrowse link
G AGO4 argonaute RISC component 4 involved_in IDA (PMID:18771919) UniProt PMID:18771919 NCBI chr 1:35,807,630...35,857,890
Ensembl chr 1:35,808,016...35,857,890
JBrowse link
G CNOT10 CCR4-NOT transcription complex subunit 10 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:32,685,188...32,773,875
Ensembl chr 3:32,685,145...32,773,875
JBrowse link
G CNOT9 CCR4-NOT transcription complex subunit 9 involved_in IEA InterPro GO_REF:0000002 NCBI chr 2:218,568,578...218,597,080
Ensembl chr 2:218,568,580...218,597,080
JBrowse link
G DCP2 decapping mRNA 2 involved_in IDA (PMID:21070968), (PMID:28002401) UniProt PMID:21070968 PMID:28002401 NCBI chr 5:112,976,702...113,022,195
Ensembl chr 5:112,976,702...113,022,195
JBrowse link
G DIS3L2 DIS3 like 3'-5' exoribonuclease 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:231,961,713...232,344,350
Ensembl chr 2:231,961,245...232,344,350
JBrowse link
G DXO decapping exoribonuclease involved_in IDA
ISS
(PMID:29601584) UniProt PMID:29601584 GO_REF:0000024 NCBI chr 6:31,969,811...31,972,290
Ensembl chr 6:31,969,810...31,972,290
JBrowse link
G ERN1 endoplasmic reticulum to nucleus signaling 1 involved_in TAS (PMID:22013210) ParkinsonsUK-UCL PMID:22013210 NCBI chr17:64,039,142...64,132,469
Ensembl chr17:64,039,142...64,130,819
Ensembl chr17:64,039,142...64,130,819
JBrowse link
G HSPA1A heat shock protein family A (Hsp70) member 1A involved_in IDA (PMID:10205060) UniProt PMID:10205060 NCBI chr 6:31,815,543...31,817,942
Ensembl chr 6:31,815,543...31,817,946
JBrowse link
G HSPA1B heat shock protein family A (Hsp70) member 1B involved_in IDA (PMID:10205060) UniProt PMID:10205060 NCBI chr 6:31,827,738...31,830,254
Ensembl chr 6:31,827,738...31,830,254
JBrowse link
G KHSRP KH-type splicing regulatory protein involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5439239|PMID:22844247) Ensembl
MGI
PMID:22844247 GO_REF:0000107 MGI:5439239 NCBI chr19:6,413,102...6,424,811
Ensembl chr19:6,413,348...6,424,794
Ensembl chr19:6,413,348...6,424,794
JBrowse link
G LSM2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within IDA (PMID:12515382) MGI PMID:12515382 NCBI chr 6:31,797,396...31,806,966
Ensembl chr 6:31,797,396...31,806,966
JBrowse link
G LSM5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within IDA (PMID:12515382) MGI PMID:12515382 NCBI chr 7:32,485,338...32,495,283
Ensembl chr 7:32,485,338...32,495,283
JBrowse link
G LSM6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within IDA (PMID:12515382) MGI PMID:12515382 NCBI chr 4:146,175,703...146,204,436
Ensembl chr 4:146,175,703...146,200,000
JBrowse link
G METTL14 methyltransferase like 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:118,685,375...118,715,430
Ensembl chr 4:118,685,392...118,715,433
JBrowse link
G METTL16 methyltransferase like 16 involved_in ISS UniProt GO_REF:0000024 NCBI chr17:2,416,049...2,511,901
Ensembl chr17:2,405,562...2,511,891
JBrowse link
G METTL3 methyltransferase like 3 involved_in ISS UniProt GO_REF:0000024 NCBI chr14:21,498,138...21,511,340
Ensembl chr14:21,498,133...21,511,342
JBrowse link
G MIRLET7A3 microRNA let-7a-3 acts_upstream_of_or_within ISO (MGI:5439239|PMID:22844247) MGI PMID:22844247 MGI:5439239 NCBI chr22:46,112,749...46,112,822
Ensembl chr22:46,112,749...46,112,822
JBrowse link
G MIRLET7B microRNA let-7b acts_upstream_of_or_within ISO (MGI:5439239|PMID:22844247) MGI PMID:22844247 MGI:5439239 NCBI chr22:46,113,686...46,113,768
Ensembl chr22:46,113,686...46,113,768
JBrowse link
G MIRLET7C microRNA let-7c acts_upstream_of_or_within ISO (MGI:5439239|PMID:22844247) MGI PMID:22844247 MGI:5439239 NCBI chr21:16,539,828...16,539,911
Ensembl chr21:16,539,828...16,539,911
JBrowse link
G NANOS2 nanos C2HC-type zinc finger 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr19:45,913,214...45,914,778
Ensembl chr19:45,913,214...45,914,778
JBrowse link
G NUDT12 nudix hydrolase 12 involved_in ISS UniProt GO_REF:0000024 NCBI chr 5:103,548,855...103,562,805
Ensembl chr 5:103,548,855...103,562,790
JBrowse link
G NUDT16 nudix hydrolase 16 involved_in IBA
IDA
(PMID:21873635)
(PMID:21070968), (PMID:21337011)
GO_Central
UniProt
PMID:21070968 PMID:21337011 PMID:21873635 NCBI chr 3:131,381,671...131,388,830
Ensembl chr 3:131,381,671...131,388,830
JBrowse link
G NUDT16L1 nudix hydrolase 16 like 1 NOT|involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:4,688,930...4,695,859
Ensembl chr16:4,693,694...4,695,859
JBrowse link
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in IDA
IEA
(PMID:12721301), (PMID:16055741) UniProt
InterPro
PMID:12721301 PMID:16055741 GO_REF:0000002 NCBI chr 2:55,634,061...55,693,853
Ensembl chr 2:55,634,061...55,693,863
JBrowse link
G RIDA reactive intermediate imine deaminase A homolog involved_in IDA (PMID:30930054) UniProt PMID:30930054 NCBI chr 8:98,102,344...98,117,171
Ensembl chr 8:98,102,344...98,117,171
JBrowse link
G RNH1 ribonuclease/angiogenin inhibitor 1 involved_in NAS (PMID:2081593) UniProt PMID:2081593 NCBI chr11:494,512...507,255
Ensembl chr11:494,512...507,300
JBrowse link
G SLFN14 schlafen family member 14 involved_in IBA
IDA
(PMID:21873635)
(PMID:25996083)
GO_Central
UniProt
PMID:21873635 PMID:25996083 NCBI chr17:35,543,985...35,560,819
Ensembl chr17:35,548,125...35,558,098
Ensembl chr17:35,548,125...35,558,098
JBrowse link
G YTHDF2 YTH N6-methyladenosine RNA binding protein 2 involved_in IDA (PMID:27558897), (PMID:30559377), (PMID:30930054) UniProt PMID:27558897 PMID:30559377 PMID:30930054 NCBI chr 1:28,736,624...28,769,775
Ensembl chr 1:28,736,621...28,769,775
JBrowse link
G ZC3H12D zinc finger CCCH-type containing 12D involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:5567042|PMID:24415781)
GO_Central
MGI
PMID:21873635 PMID:24415781 MGI:5567042 NCBI chr 6:149,446,795...149,485,014
Ensembl chr 6:149,446,795...149,485,014
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in
acts_upstream_of_or_within
IDA (PMID:10330172), (PMID:20221403)
(PMID:10751406), (PMID:11782475)
UniProt
MGI
PMID:10330172 PMID:10751406 PMID:11782475 PMID:20221403 NCBI chr19:39,406,847...39,409,407
Ensembl chr19:39,406,847...39,409,412
JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:43,222,402...43,226,606
Ensembl chr 2:43,222,402...43,226,606
JBrowse link
G ZHX2 zinc fingers and homeoboxes 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:49288|PMID:1370712) Ensembl
MGI
PMID:1370712 GO_REF:0000107 MGI:49288 NCBI chr 8:122,781,655...122,974,514
Ensembl chr 8:122,781,655...122,974,510
JBrowse link
mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELF1 CUGBP Elav-like family member 1 involved_in ISS (PMID:30508596) ARUK-UCL PMID:30508596 NCBI chr11:47,465,937...47,565,539
Ensembl chr11:47,465,933...47,565,569
JBrowse link
G CNOT6L CCR4-NOT transcription complex subunit 6 like acts_upstream_of_or_within ISO (MGI:3828348|PMID:17452450) MGI PMID:17452450 MGI:3828348 NCBI chr 4:77,713,387...77,820,269
Ensembl chr 4:77,713,387...77,819,615
JBrowse link
G FTO FTO alpha-ketoglutarate dependent dioxygenase involved_in IDA (PMID:28002401), (PMID:30197295) UniProt PMID:28002401 PMID:30197295 NCBI chr16:53,703,963...54,121,941
Ensembl chr16:53,701,692...54,158,512
JBrowse link
G GIGYF2 GRB10 interacting GYF protein 2 involved_in IDA (PMID:27157137) ParkinsonsUK-UCL PMID:27157137 NCBI chr 2:232,697,331...232,860,605
Ensembl chr 2:232,697,299...232,860,575
Ensembl chr 2:232,697,299...232,860,575
JBrowse link
G HNRNPR heterogeneous nuclear ribonucleoprotein R involved_in IEA
ISO
Ensembl
RGD
PMID:15798208 GO_REF:0000107 RGD:9854643 NCBI chr 1:23,304,688...23,344,316
Ensembl chr 1:23,303,771...23,344,336
JBrowse link
G METTL14 methyltransferase like 14 involved_in ISS UniProt GO_REF:0000024 NCBI chr 4:118,685,375...118,715,430
Ensembl chr 4:118,685,392...118,715,433
JBrowse link
G METTL16 methyltransferase like 16 involved_in ISS UniProt GO_REF:0000024 NCBI chr17:2,416,049...2,511,901
Ensembl chr17:2,405,562...2,511,891
JBrowse link
G METTL3 methyltransferase like 3 involved_in ISS UniProt GO_REF:0000024 NCBI chr14:21,498,138...21,511,340
Ensembl chr14:21,498,133...21,511,342
JBrowse link
G MEX3D mex-3 RNA binding family member D involved_in NAS (PMID:14769789) BHF-UCL PMID:14769789 NCBI chr19:1,554,672...1,568,325
Ensembl chr19:1,554,669...1,568,058
Ensembl chr19:1,554,669...1,568,058
JBrowse link
G PUM1 pumilio RNA binding family member 1 involved_in ISS UniProt GO_REF:0000024 NCBI chr 1:30,931,506...31,065,717
Ensembl chr 1:30,931,506...31,065,991
JBrowse link
G RBM24 RNA binding motif protein 24 involved_in IMP (PMID:29104163) UniProt PMID:29104163 NCBI chr 6:17,281,361...17,293,875
Ensembl chr 6:17,281,361...17,293,871
JBrowse link
G RIDA reactive intermediate imine deaminase A homolog involved_in IDA (PMID:30930054) UniProt PMID:30930054 NCBI chr 8:98,102,344...98,117,171
Ensembl chr 8:98,102,344...98,117,171
JBrowse link
G ROCK1 Rho associated coiled-coil containing protein kinase 1 involved_in ISS ARUK-UCL GO_REF:0000024 NCBI chr18:20,946,906...21,111,813
Ensembl chr18:20,946,906...21,111,813
JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 involved_in ISS ARUK-UCL GO_REF:0000024 NCBI chr 2:11,179,759...11,345,437
Ensembl chr 2:11,179,759...11,348,330
JBrowse link
G YTHDF1 YTH N6-methyladenosine RNA binding protein 1 involved_in IBA
IDA
(PMID:21873635)
(PMID:32492408)
GO_Central
UniProt
PMID:21873635 PMID:32492408 NCBI chr20:63,195,429...63,216,131
Ensembl chr20:63,195,429...63,216,139
JBrowse link
G YTHDF2 YTH N6-methyladenosine RNA binding protein 2 involved_in IMP
IBA
IDA
(PMID:28106072), (PMID:32169943)
(PMID:21873635)
(PMID:27558897), (PMID:30559377), (PMID:30930054), (PMID:32492408)
UniProt
GO_Central
PMID:21873635 PMID:27558897 PMID:28106072 PMID:30559377 PMID:30930054 PMID:32169943 PMID:32492408 NCBI chr 1:28,736,624...28,769,775
Ensembl chr 1:28,736,621...28,769,775
JBrowse link
G YTHDF3 YTH N6-methyladenosine RNA binding protein 3 involved_in IMP
IDA
IBA
(PMID:28106072)
(PMID:32492408)
(PMID:21873635)
UniProt
GO_Central
PMID:21873635 PMID:28106072 PMID:32492408 NCBI chr 8:63,168,553...63,212,788
Ensembl chr 8:63,168,553...63,212,786
JBrowse link
mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOBEC1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 acts_upstream_of_or_within ISO (MGI:3057047|PMID:15480992) MGI PMID:15480992 MGI:3057047 NCBI chr12:7,649,400...7,670,599
Ensembl chr12:7,649,400...7,665,908
JBrowse link
G AXIN2 axin 2 involved_in IMP (PMID:17072303) BHF-UCL PMID:17072303 NCBI chr17:65,528,563...65,561,648
Ensembl chr17:65,528,563...65,561,648
JBrowse link
G CIRBP cold inducible RNA binding protein involved_in IDA (PMID:11574538) UniProt PMID:11574538 NCBI chr19:1,269,332...1,274,880
Ensembl chr19:1,259,384...1,274,880
JBrowse link
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (MGI:5439239|PMID:22844247) MGI PMID:22844247 MGI:5439239 NCBI chr14:95,086,228...95,158,263
Ensembl chr14:95,086,228...95,158,010
JBrowse link
G DND1 DND microRNA-mediated repression inhibitor 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:140,670,794...140,673,576
Ensembl chr 5:140,670,794...140,673,576
JBrowse link
G E2F1 E2F transcription factor 1 involved_in IDA (PMID:15766563) BHF-UCL PMID:15766563 NCBI chr20:33,675,477...33,686,385
Ensembl chr20:33,675,477...33,686,385
JBrowse link
G EIF4ENIF1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in IDA (PMID:24335285), (PMID:32354837) UniProt PMID:24335285 PMID:32354837 NCBI chr22:31,434,648...31,489,950
Ensembl chr22:31,436,977...31,496,108
JBrowse link
G ELAVL1 ELAV like RNA binding protein 1 involved_in
acts_upstream_of_or_within
IMP
IDA
(PMID:19029303)
(PMID:21613615)
(PMID:31358969)
UniProt
MGI
PMID:19029303 PMID:21613615 PMID:31358969 NCBI chr19:7,958,573...8,005,641
Ensembl chr19:7,958,573...8,005,659
JBrowse link
G FUS FUS RNA binding protein acts_upstream_of_or_within IDA (PMID:27378374) MGI PMID:27378374 NCBI chr16:31,180,110...31,194,871
Ensembl chr16:31,180,110...31,194,871
Ensembl chr16:31,180,110...31,194,871
JBrowse link
G GDNF glial cell derived neurotrophic factor involved_in IDA (PMID:12358785) BHF-UCL PMID:12358785 NCBI chr 5:37,812,677...37,840,044
Ensembl chr 5:37,812,677...37,840,041
JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D involved_in IEA
ISO
Ensembl
RGD
PMID:15192077 GO_REF:0000107 RGD:1357938 NCBI chr 4:82,352,498...82,373,991
Ensembl chr 4:82,352,498...82,374,503
JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in IDA (PMID:17174306) UniProt PMID:17174306 NCBI chr 1:244,850,297...244,864,543
Ensembl chr 1:244,840,638...244,864,560
JBrowse link
G IKBKE inhibitor of nuclear factor kappa B kinase subunit epsilon involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:206,470,243...206,496,890
Ensembl chr 1:206,470,476...206,496,889
JBrowse link
G LARP1 La ribonucleoprotein 1, translational regulator involved_in IMP (PMID:25940091), (PMID:28673543) UniProt PMID:25940091 PMID:28673543 NCBI chr 5:154,682,979...154,817,605
Ensembl chr 5:154,712,843...154,817,605
JBrowse link
G MAPKAPK2 MAPK activated protein kinase 2 acts_upstream_of_or_within ISO (MGI:2158083|PMID:11741878) MGI PMID:11741878 MGI:2158083 NCBI chr 1:206,684,905...206,734,283
Ensembl chr 1:206,684,944...206,734,283
Ensembl chr 1:206,684,944...206,734,283
JBrowse link
G MEIOC meiosis specific with coiled-coil domain involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr17:44,656,417...44,677,086
Ensembl chr17:44,656,404...44,690,308
JBrowse link
G MTOR mechanistic target of rapamycin kinase involved_in IEA
ISO
Ensembl
RGD
PMID:21073857 GO_REF:0000107 RGD:10040969 NCBI chr 1:11,106,535...11,273,497
Ensembl chr 1:11,106,535...11,262,551
JBrowse link
G NOCT nocturnin involved_in ISS UniProt GO_REF:0000024 NCBI chr 4:139,015,781...139,045,939
Ensembl chr 4:139,015,781...139,045,939
JBrowse link
G PABPC1 poly(A) binding protein cytoplasmic 1 involved_in TAS (PMID:11997512) UniProt PMID:11997512 NCBI chr 8:100,702,916...100,722,088
Ensembl chr 8:100,685,816...100,722,809
JBrowse link
G PAIP1 poly(A) binding protein interacting protein 1 involved_in TAS (PMID:11997512) UniProt PMID:11997512 NCBI chr 5:43,526,267...43,557,411
Ensembl chr 5:43,526,267...43,557,758
JBrowse link
G QKI QKI, KH domain containing RNA binding ISO RGD PMID:16855020 RGD:10045995 NCBI chr 6:163,414,486...163,578,592
Ensembl chr 6:163,414,000...163,578,592
JBrowse link
G RBM24 RNA binding motif protein 24 involved_in IMP (PMID:29104163) UniProt PMID:29104163 NCBI chr 6:17,281,361...17,293,875
Ensembl chr 6:17,281,361...17,293,871
JBrowse link
G RBM46 RNA binding motif protein 46 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5644240|PMID:25397698) Ensembl
MGI
PMID:25397698 GO_REF:0000107 MGI:5644240 NCBI chr 4:154,781,249...154,828,813
Ensembl chr 4:154,781,213...154,828,813
JBrowse link
G SLC11A1 solute carrier family 11 member 1 involved_in
acts_upstream_of_or_within
ISS
ISO
(MGI:85148|PMID:9009318) BHF-UCL
MGI
PMID:9009318 GO_REF:0000024 MGI:85148 NCBI chr 2:218,381,766...218,396,894
Ensembl chr 2:218,382,029...218,396,894
JBrowse link
G SRSF1 serine and arginine rich splicing factor 1 involved_in ISO (MGI:5291882|PMID:21822258) MGI PMID:21822258 MGI:5291882 NCBI chr17:58,000,919...58,007,273
Ensembl chr17:58,000,919...58,007,346
JBrowse link
G TAF15 TATA-box binding protein associated factor 15 acts_upstream_of_or_within IDA (PMID:27378374) MGI PMID:27378374 NCBI chr17:35,809,484...35,847,242
Ensembl chr17:35,713,791...35,864,615
JBrowse link
G TENT5A terminal nucleotidyltransferase 5A involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:81,745,730...81,752,681
Ensembl chr 6:81,491,439...81,752,774
JBrowse link
G TENT5B terminal nucleotidyltransferase 5B involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:27,005,020...27,012,850
Ensembl chr 1:27,005,020...27,012,850
JBrowse link
G TENT5C terminal nucleotidyltransferase 5C involved_in IBA
IDA
(PMID:21873635)
(PMID:28931820)
GO_Central
UniProt
PMID:21873635 PMID:28931820 NCBI chr 1:117,606,048...117,628,389
Ensembl chr 1:117,606,048...117,628,389
JBrowse link
G TENT5D terminal nucleotidyltransferase 5D involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr  X:80,335,439...80,446,885
Ensembl chr  X:80,335,504...80,445,311
JBrowse link
G THRAP3 thyroid hormone receptor associated protein 3 involved_in IMP (PMID:18794151) UniProt PMID:18794151 NCBI chr 1:36,224,429...36,305,357
Ensembl chr 1:36,224,432...36,305,357
JBrowse link
G TRAF2 TNF receptor associated factor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:136,881,933...136,926,615
Ensembl chr 9:136,881,912...136,926,607
JBrowse link
G TRAF3IP2 TRAF3 interacting protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:111,555,381...111,605,878
Ensembl chr 6:111,555,381...111,606,906
JBrowse link
G TRAF5 TNF receptor associated factor 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:211,326,594...211,374,946
Ensembl chr 1:211,326,615...211,374,946
JBrowse link
G VEGFA vascular endothelial growth factor A ISO RGD PMID:12881220 RGD:1580563 NCBI chr 6:43,770,209...43,786,487
Ensembl chr 6:43,770,184...43,786,487
JBrowse link
G VIP vasoactive intestinal peptide involved_in ISS AgBase GO_REF:0000024 NCBI chr 6:152,750,797...152,759,765
Ensembl chr 6:152,750,797...152,759,765
JBrowse link
G YBX1 Y-box binding protein 1 involved_in IDA (PMID:31358969) UniProt PMID:31358969 NCBI chr 1:42,682,418...42,703,805
Ensembl chr 1:42,682,418...42,703,805
JBrowse link
G YBX2 Y-box binding protein 2 acts_upstream_of_or_within ISO (MGI:3696301|PMID:17035640) MGI PMID:17035640 MGI:3696301 NCBI chr17:7,288,254...7,294,639
Ensembl chr17:7,288,263...7,294,639
JBrowse link
NAD catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT12 nudix hydrolase 12 involved_in
acts_upstream_of_or_within
IBA
IDA
(PMID:21873635)
(PMID:12790796)
GO_Central
MGI
PMID:12790796 PMID:21873635 NCBI chr 5:103,548,855...103,562,805
Ensembl chr 5:103,548,855...103,562,790
JBrowse link
G NUDT17 nudix hydrolase 17 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:145,844,985...145,848,954
Ensembl chr 1:145,845,630...145,848,954
JBrowse link
G SARM1 sterile alpha and TIR motif containing 1 involved_in IDA (PMID:25908823), (PMID:27671644), (PMID:28334607), (PMID:31128467), (PMID:31439792), (PMID:31439793), (PMID:32049506), (PMID:32828421), (PMID:33053563) UniProt PMID:25908823 PMID:27671644 PMID:28334607 PMID:31128467 PMID:31439792 PMID:31439793 PMID:32049506 PMID:32828421 PMID:33053563 NCBI chr17:28,371,694...28,404,049
Ensembl chr17:28,364,356...28,404,049
JBrowse link
G TIGD7 tigger transposable element derived 7 involved_in ISO (MGI:5426136|PMID:11011142) UniProt PMID:11011142 MGI:5426136 NCBI chr16:3,298,808...3,305,430
Ensembl chr16:3,298,808...3,305,729
JBrowse link
NADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT12 nudix hydrolase 12 involved_in
acts_upstream_of_or_within
IBA
IDA
(PMID:21873635)
(PMID:12790796)
GO_Central
MGI
PMID:12790796 PMID:21873635 NCBI chr 5:103,548,855...103,562,805
Ensembl chr 5:103,548,855...103,562,790
JBrowse link
G NUDT13 nudix hydrolase 13 involved_in ISS UniProt GO_REF:0000024 NCBI chr10:73,110,455...73,131,827
Ensembl chr10:73,110,375...73,131,828
JBrowse link
G NUDT17 nudix hydrolase 17 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:145,844,985...145,848,954
Ensembl chr 1:145,845,630...145,848,954
JBrowse link
ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TENT4B terminal nucleotidyltransferase 4B involved_in IMP (PMID:26950371) BHF-UCL PMID:26950371 NCBI chr16:50,152,911...50,235,310
Ensembl chr16:50,152,911...50,235,310
Ensembl chr16:50,152,911...50,235,310
JBrowse link
negative regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G METTL16 methyltransferase like 16 involved_in IDA (PMID:28525753) UniProt PMID:28525753 NCBI chr17:2,416,049...2,511,901
Ensembl chr17:2,405,562...2,511,891
JBrowse link
negative regulation of apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DFFA DNA fragmentation factor subunit alpha acts_upstream_of_or_within IDA (PMID:15572351) MGI PMID:15572351 NCBI chr 1:10,456,522...10,472,529
Ensembl chr 1:10,456,522...10,472,529
JBrowse link
G NMNAT1 nicotinamide nucleotide adenylyltransferase 1 involved_in IEA
ISO
Ensembl
RGD
PMID:27184051 GO_REF:0000107 RGD:13781945 NCBI chr 1:9,942,923...9,996,884
Ensembl chr 1:9,943,428...9,985,501
JBrowse link
G PAM16 presequence translocase associated motor 16 involved_in IEA
ISO
Ensembl
RGD
PMID:24069394 GO_REF:0000107 RGD:13462066 NCBI chr16:4,340,251...4,351,321
Ensembl chr16:4,331,549...4,355,607
JBrowse link
negative regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EIF4ENIF1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in IDA (PMID:32354837) UniProt PMID:32354837 NCBI chr22:31,434,648...31,489,950
Ensembl chr22:31,436,977...31,496,108
JBrowse link
negative regulation of DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RGN regucalcin involved_in IEA
ISO
Ensembl
RGD
PMID:2001740 GO_REF:0000107 RGD:9590215 NCBI chr  X:47,078,414...47,093,313
Ensembl chr  X:47,078,355...47,093,314
JBrowse link
negative regulation of miRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TENT2 terminal nucleotidyltransferase 2 involved_in IDA (PMID:23200856) UniProt PMID:23200856 NCBI chr 5:79,612,421...79,688,246
Ensembl chr 5:79,612,120...79,686,648
Ensembl chr 5:79,612,120...79,686,648
JBrowse link
negative regulation of mitochondrial RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRPPRC leucine rich pentatricopeptide repeat containing involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5301479|PMID:21880015)
(MGI:5438202|PMID:22045337)
Ensembl
MGI
PMID:21880015 PMID:22045337 GO_REF:0000107 MGI:5301479 MGI:5438202 NCBI chr 2:43,886,224...43,995,989
Ensembl chr 2:43,886,224...43,995,989
Ensembl chr 2:43,886,224...43,995,989
JBrowse link
G SLIRP SRA stem-loop interacting RNA binding protein involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:5438202|PMID:22045337)
GO_Central
MGI
PMID:21873635 PMID:22045337 MGI:5438202 NCBI chr14:77,708,071...77,717,598
Ensembl chr14:77,708,071...77,761,104
JBrowse link
negative regulation of mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FMR1 FMRP translational regulator 1 involved_in IMP (PMID:25225333) CAFA PMID:25225333 NCBI chr  X:147,911,919...147,951,125
Ensembl chr  X:147,911,951...147,951,125
Ensembl chr  X:147,911,951...147,951,125
JBrowse link
G PKP1 plakophilin 1 involved_in IMP (PMID:25225333) CAFA PMID:25225333 NCBI chr 1:201,283,506...201,332,989
Ensembl chr 1:201,283,452...201,332,993
JBrowse link
G PKP3 plakophilin 3 involved_in IMP (PMID:25225333) CAFA PMID:25225333 NCBI chr11:392,596...404,908
Ensembl chr11:392,614...404,908
JBrowse link
negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHX34 DExH-box helicase 34 involved_in IMP (PMID:23828042) UniProt PMID:23828042 NCBI chr19:47,349,315...47,382,704
Ensembl chr19:47,349,315...47,382,704
JBrowse link
G NBAS NBAS subunit of NRZ tethering complex involved_in IMP (PMID:23828042) UniProt PMID:23828042 NCBI chr 2:14,998,067...15,561,344
Ensembl chr 2:15,166,914...15,561,334
JBrowse link
G PABPC1 poly(A) binding protein cytoplasmic 1 involved_in IDA (PMID:18447585) UniProt PMID:18447585 NCBI chr 8:100,702,916...100,722,088
Ensembl chr 8:100,685,816...100,722,809
JBrowse link
G SECISBP2 SECIS binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5582859|PMID:24274065) Ensembl
MGI
PMID:24274065 GO_REF:0000107 MGI:5582859 NCBI chr 9:89,318,500...89,367,117
Ensembl chr 9:89,318,500...89,359,663
JBrowse link
negative regulation of nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TENT4A terminal nucleotidyltransferase 4A involved_in IMP (PMID:30026317) UniProt PMID:30026317 NCBI chr 5:6,713,432...6,757,045
Ensembl chr 5:6,713,432...6,757,044
JBrowse link
G TENT4B terminal nucleotidyltransferase 4B involved_in IMP (PMID:30026317) UniProt PMID:30026317 NCBI chr16:50,152,911...50,235,310
Ensembl chr16:50,152,911...50,235,310
Ensembl chr16:50,152,911...50,235,310
JBrowse link
G TOB1 transducer of ERBB2, 1 involved_in IDA (PMID:18377426) UniProt PMID:18377426 NCBI chr17:50,862,223...50,867,978
Ensembl chr17:50,862,223...50,867,978
JBrowse link
negative regulation of RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NRDE2 NRDE-2, necessary for RNA interference, domain containing involved_in IMP (PMID:30842217) UniProt PMID:30842217 NCBI chr14:90,267,860...90,331,969
Ensembl chr14:90,267,860...90,331,969
JBrowse link
negative regulation of UDP-glucose catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GSK3A glycogen synthase kinase 3 alpha involved_in IC (PMID:11035810) UniProt PMID:11035810 NCBI chr19:42,230,186...42,243,330
Ensembl chr19:42,230,190...42,242,625
Ensembl chr19:42,230,190...42,242,625
JBrowse link
nicotinamide riboside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTAP methylthioadenosine phosphorylase NOT|involved_in IDA (PMID:19001417) UniProt PMID:19001417 NCBI chr 9:21,802,636...21,867,081
Ensembl chr 9:21,802,636...21,937,651
JBrowse link
G PNP purine nucleoside phosphorylase involved_in IDA (PMID:19001417) UniProt PMID:19001417 NCBI chr14:20,469,406...20,477,089
Ensembl chr14:20,468,954...20,477,094
Ensembl chr14:20,468,954...20,477,094
JBrowse link
nitrate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POR cytochrome p450 oxidoreductase involved_in IEA
ISO
Ensembl
RGD
PMID:16527817 GO_REF:0000107 RGD:4889831 NCBI chr 7:75,915,155...75,986,855
Ensembl chr 7:75,899,200...75,986,855
JBrowse link
nitric oxide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POR cytochrome p450 oxidoreductase involved_in IEA
ISO
Ensembl
RGD
PMID:19152507 GO_REF:0000107 RGD:2316786 NCBI chr 7:75,915,155...75,986,855
Ensembl chr 7:75,899,200...75,986,855
JBrowse link
nonfunctional rRNA decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PELO pelota mRNA surveillance and ribosome rescue factor involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 5:52,787,916...52,804,044
Ensembl chr 5:52,787,916...52,804,044
JBrowse link
nuclear histone mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SSB small RNA binding exonuclease protection factor La involved_in IMP (PMID:9154801) CAFA PMID:9154801 NCBI chr 2:169,798,871...169,812,064
Ensembl chr 2:169,791,933...169,812,064
JBrowse link
nuclear mRNA surveillance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DXO decapping exoribonuclease involved_in ISS UniProt GO_REF:0000024 NCBI chr 6:31,969,811...31,972,290
Ensembl chr 6:31,969,810...31,972,290
JBrowse link
G EXOSC10 exosome component 10 involved_in IMP (PMID:17545563) UniProt PMID:17545563 NCBI chr 1:11,066,613...11,099,869
Ensembl chr 1:11,066,618...11,099,869
JBrowse link
G EXOSC4 exosome component 4 involved_in IMP
IBA
(PMID:17545563)
(PMID:21873635)
UniProt
GO_Central
PMID:17545563 PMID:21873635 NCBI chr 8:144,064,061...144,080,648
Ensembl chr 8:144,078,648...144,080,648
JBrowse link
G EXOSC5 exosome component 5 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr19:41,386,374...41,397,359
Ensembl chr19:41,386,374...41,397,359
JBrowse link
G EXOSC6 exosome component 6 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr16:70,246,778...70,251,940
Ensembl chr16:70,246,778...70,251,940
JBrowse link
G EXOSC7 exosome component 7 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:44,975,291...45,012,668
Ensembl chr 3:44,975,241...45,036,066
JBrowse link
G EXOSC8 exosome component 8 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:37,000,373...37,009,614
Ensembl chr13:36,998,816...37,009,614
JBrowse link
G EXOSC9 exosome component 9 involved_in IMP
IBA
(PMID:17545563)
(PMID:21873635)
UniProt
GO_Central
PMID:17545563 PMID:21873635 NCBI chr 4:121,801,323...121,817,021
Ensembl chr 4:121,801,317...121,817,021
Ensembl chr 4:121,801,317...121,817,021
JBrowse link
G XRN1 5'-3' exoribonuclease 1 involved_in IMP (PMID:17545563) UniProt PMID:17545563 NCBI chr 3:142,306,610...142,448,062
Ensembl chr 3:142,306,607...142,448,062
JBrowse link
nuclear polyadenylation-dependent antisense transcript catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC10 exosome component 10 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:11,066,613...11,099,869
Ensembl chr 1:11,066,618...11,099,869
JBrowse link
nuclear polyadenylation-dependent CUT catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC10 exosome component 10 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:11,066,613...11,099,869
Ensembl chr 1:11,066,618...11,099,869
JBrowse link
nuclear polyadenylation-dependent mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC7 exosome component 7 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:44,975,291...45,012,668
Ensembl chr 3:44,975,241...45,036,066
JBrowse link
G EXOSC8 exosome component 8 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:37,000,373...37,009,614
Ensembl chr13:36,998,816...37,009,614
JBrowse link
G EXOSC9 exosome component 9 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:121,801,323...121,817,021
Ensembl chr 4:121,801,317...121,817,021
Ensembl chr 4:121,801,317...121,817,021
JBrowse link
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in IDA (PMID:16934922) UniProt PMID:16934922 NCBI chr 2:55,634,061...55,693,853
Ensembl chr 2:55,634,061...55,693,863
JBrowse link
nuclear polyadenylation-dependent rRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC10 exosome component 10 involved_in IMP
IBA
(PMID:16455498)
(PMID:21873635)
UniProt
GO_Central
PMID:16455498 PMID:21873635 NCBI chr 1:11,066,613...11,099,869
Ensembl chr 1:11,066,618...11,099,869
JBrowse link
G EXOSC2 exosome component 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:130,693,760...130,704,894
Ensembl chr 9:130,693,721...130,704,894
JBrowse link
G EXOSC3 exosome component 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:37,779,714...37,785,092
Ensembl chr 9:37,766,978...37,801,437
Ensembl chr 9:37,766,978...37,801,437
JBrowse link
G EXOSC7 exosome component 7 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:44,975,291...45,012,668
Ensembl chr 3:44,975,241...45,036,066
JBrowse link
G EXOSC8 exosome component 8 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:37,000,373...37,009,614
Ensembl chr13:36,998,816...37,009,614
JBrowse link
G EXOSC9 exosome component 9 involved_in IBA
IMP
(PMID:21873635)
(PMID:16455498)
GO_Central
UniProt
PMID:16455498 PMID:21873635 NCBI chr 4:121,801,323...121,817,021
Ensembl chr 4:121,801,317...121,817,021
Ensembl chr 4:121,801,317...121,817,021
JBrowse link
nuclear polyadenylation-dependent snoRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC10 exosome component 10 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:11,066,613...11,099,869
Ensembl chr 1:11,066,618...11,099,869
JBrowse link
nuclear polyadenylation-dependent snRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC10 exosome component 10 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:11,066,613...11,099,869
Ensembl chr 1:11,066,618...11,099,869
JBrowse link
nuclear polyadenylation-dependent tRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC10 exosome component 10 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:11,066,613...11,099,869
Ensembl chr 1:11,066,618...11,099,869
JBrowse link
G EXOSC2 exosome component 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:130,693,760...130,704,894
Ensembl chr 9:130,693,721...130,704,894
JBrowse link
G EXOSC3 exosome component 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:37,779,714...37,785,092
Ensembl chr 9:37,766,978...37,801,437
Ensembl chr 9:37,766,978...37,801,437
JBrowse link
G EXOSC7 exosome component 7 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:44,975,291...45,012,668
Ensembl chr 3:44,975,241...45,036,066
JBrowse link
G EXOSC8 exosome component 8 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:37,000,373...37,009,614
Ensembl chr13:36,998,816...37,009,614
JBrowse link
G EXOSC9 exosome component 9 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:121,801,323...121,817,021
Ensembl chr 4:121,801,317...121,817,021
Ensembl chr 4:121,801,317...121,817,021
JBrowse link
nuclear retention of pre-mRNA at the site of transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PCID2 PCI domain containing 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr13:113,165,002...113,209,467
Ensembl chr13:113,177,536...113,208,715
JBrowse link
nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC2 exosome component 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:130,693,760...130,704,894
Ensembl chr 9:130,693,721...130,704,894
JBrowse link
G EXOSC3 exosome component 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:37,779,714...37,785,092
Ensembl chr 9:37,766,978...37,801,437
Ensembl chr 9:37,766,978...37,801,437
JBrowse link
nuclear retention of unspliced pre-mRNA at the site of transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AL157392.5 novel protein involved_in IBA (PMID:21873635) GO_Central PMID:21873635 Ensembl chr10:13,610,047...13,655,929 JBrowse link
G EXOSC10 exosome component 10 involved_in IBA
IMP
(PMID:21873635)
(PMID:20699273)
GO_Central
UniProt
PMID:20699273 PMID:21873635 NCBI chr 1:11,066,613...11,099,869
Ensembl chr 1:11,066,618...11,099,869
JBrowse link
G PRPF18 pre-mRNA processing factor 18 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr10:13,586,811...13,645,344
Ensembl chr10:13,586,939...13,630,859
JBrowse link
nuclear-transcribed mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO1 argonaute RISC component 1 involved_in IDA (PMID:18771919) UniProt PMID:18771919 NCBI chr 1:35,869,761...35,930,532
Ensembl chr 1:35,869,808...35,930,532
JBrowse link
G DDX5 DEAD-box helicase 5 involved_in IDA (PMID:23788676) UniProt PMID:23788676 NCBI chr17:64,498,254...64,506,866
Ensembl chr17:64,498,254...64,508,199
JBrowse link
G DHX34 DExH-box helicase 34 involved_in IMP (PMID:23828042) UniProt PMID:23828042 NCBI chr19:47,349,315...47,382,704
Ensembl chr19:47,349,315...47,382,704
JBrowse link
G DXO decapping exoribonuclease involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:31,969,811...31,972,290
Ensembl chr 6:31,969,810...31,972,290
JBrowse link
G EXOSC10 exosome component 10 involved_in IMP (PMID:17545563) UniProt PMID:17545563 NCBI chr 1:11,066,613...11,099,869
Ensembl chr 1:11,066,618...11,099,869
JBrowse link
G EXOSC4 exosome component 4 involved_in IMP (PMID:17545563) UniProt PMID:17545563 NCBI chr 8:144,064,061...144,080,648
Ensembl chr 8:144,078,648...144,080,648
JBrowse link
G EXOSC9 exosome component 9 involved_in IMP (PMID:17545563) UniProt PMID:17545563 NCBI chr 4:121,801,323...121,817,021
Ensembl chr 4:121,801,317...121,817,021
Ensembl chr 4:121,801,317...121,817,021
JBrowse link
G LSM4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated involved_in IEA UniProt GO_REF:0000104 NCBI chr19:18,306,236...18,323,076
Ensembl chr19:18,306,230...18,323,274
Ensembl chr19:18,306,230...18,323,274
JBrowse link
G MRTO4 MRT4 homolog, ribosome maturation factor involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 1:19,251,799...19,260,128
Ensembl chr 1:19,251,805...19,260,128
JBrowse link
G NBAS NBAS subunit of NRZ tethering complex involved_in IMP (PMID:23828042) UniProt PMID:23828042 NCBI chr 2:14,998,067...15,561,344
Ensembl chr 2:15,166,914...15,561,334
JBrowse link
G NBDY negative regulator of P-body association involved_in IDA (PMID:27918561) UniProt PMID:27918561 NCBI chr  X:56,729,242...56,819,179
Ensembl chr  X:56,729,241...56,819,179
JBrowse link
G PTBP1 polypyrimidine tract binding protein 1 ISO RGD PMID:15039777 RGD:10045958 NCBI chr19:797,452...812,316
Ensembl chr19:797,075...812,327