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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular nitrogen compound catabolic process
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Accession:GO:0044270 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of organic and inorganic nitrogenous compounds.
Synonyms:broad_synonym: nitrogen compound breakdown;   nitrogen compound catabolism;   nitrogen compound degradation


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3'-UTR-mediated mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CPEB3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO (PMID:21336257) UniProt PMID:21336257 NCBI chr10:88,794,186...89,038,808
Ensembl chr10:92,320,240...92,506,089
JBrowse link
G DHX36 DEAH-box helicase 36 involved_in ISO (PMID:26489465) UniProt PMID:26489465 NCBI chr 3:151,331,468...151,382,406
Ensembl chr 3:158,885,541...158,935,871
JBrowse link
G DND1 DND microRNA-mediated repression inhibitor 1 involved_in ISO (PMID:28297718) CACAO PMID:28297718 NCBI chr 5:136,035,464...136,038,524
Ensembl chr 5:142,151,441...142,154,262
JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D ISO RGD PMID:20805360 RGD:10042974 NCBI chr 4:41,825,518...41,846,166
Ensembl chr 4:47,676,599...47,696,894
JBrowse link
G KHSRP KH-type splicing regulatory protein involved_in ISO (PMID:16126846)
(PMID:28275056)
UniProt
CACAO
PMID:16126846 PMID:28275056 NCBI chr19:5,433,989...5,445,721 JBrowse link
G MOV10 Mov10 RISC complex RNA helicase involved_in ISO (PMID:24726324) UniProt PMID:24726324 NCBI chr 1:115,327,051...115,353,483
Ensembl chr 1:124,999,353...125,025,820
JBrowse link
G PLEKHN1 pleckstrin homology domain containing N1 involved_in ISO (PMID:29180010)
(MGI:6105829|PMID:27616329)
UniProt PMID:27616329 PMID:29180010 MGI:6105829 Ensembl chr 1:865,290...873,575 JBrowse link
G QKI QKI, KH domain containing RNA binding acts_upstream_of_or_within ISO (MGI:5316962|PMID:20631256) MGI PMID:20631256 MGI:5316962 NCBI chr 6:161,361,413...161,523,414 JBrowse link
G RBM24 RNA binding motif protein 24 involved_in ISO (PMID:24375645) UniProt PMID:24375645 NCBI chr 6:17,140,450...17,153,035 JBrowse link
G RC3H1 ring finger and CCCH-type domains 1 involved_in ISO (MGI:5706859|PMID:26000482), (MGI:5751631|PMID:26255671) UniProt PMID:26000482 PMID:26255671 MGI:5706859 MGI:5751631 NCBI chr 1:149,454,748...149,539,566
Ensembl chr 1:153,160,661...153,213,402
JBrowse link
G TARDBP TAR DNA binding protein involved_in ISO (PMID:28335005) CACAO PMID:28335005 NCBI chr 1:9,775,084...9,786,710
Ensembl chr 1:10,996,006...11,008,732
JBrowse link
G TRIM71 tripartite motif containing 71 involved_in ISO (PMID:23125361) CACAO PMID:23125361 NCBI chr 3:32,745,217...32,824,985
Ensembl chr 3:33,050,997...33,123,910
JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in ISO (PMID:26255671)
(PMID:24726324)
UniProt PMID:24726324 PMID:26255671 NCBI chr19:18,269,878...18,306,199
Ensembl chr19:19,292,725...19,313,224
JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in ISO (PMID:19909337)
(MGI:3842851|PMID:19322177), (MGI:5706859|PMID:26000482), (MGI:5706909|PMID:23185455), (MGI:5707103|PMID:26134560), (MGI:5751631|PMID:26255671)
UniProt PMID:19322177 PMID:19909337 PMID:23185455 PMID:26000482 PMID:26134560 PMID:26255671 MGI:3842851 MGI:5706859 MGI:5706909 MGI:5707103 MGI:5751631 NCBI chr 1:36,743,341...36,753,261
Ensembl chr 1:38,093,917...38,103,556
JBrowse link
G ZC3H12D zinc finger CCCH-type containing 12D involved_in ISO (MGI:5707103|PMID:26134560) UniProt PMID:26134560 MGI:5707103 NCBI chr 6:147,266,039...147,304,289
Ensembl chr 6:151,974,485...151,999,898
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in ISO (PMID:11719186), (PMID:15687258), (PMID:20221403), (PMID:27193233), (PMID:9703499)
(MGI:5784976|PMID:22701344), (MGI:5788345|PMID:27193233)
(MGI:5795824|PMID:17288565)
(PMID:14679154), (PMID:15187101), (PMID:15634918), (PMID:15766526)
UniProt PMID:9703499 PMID:11719186 PMID:14679154 PMID:15187101 PMID:15634918 PMID:15687258 PMID:15766526 PMID:17288565 PMID:20221403 PMID:22701344 PMID:27193233 MGI:5784976 MGI:5788345 MGI:5795824 NCBI chr19:36,505,056...36,507,693
Ensembl chr19:45,052,801...45,055,390
JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in ISO (PMID:12198173), (PMID:25014217), (PMID:25106868)
(MGI:5779430|PMID:27102483), (MGI:5784968|PMID:24700863)
(MGI:4818820|PMID:20622884), (MGI:5784967|PMID:24733888), (MGI:5784976|PMID:22701344)
(PMID:15467755), (PMID:15538381), (PMID:15687258), (PMID:18326031), (PMID:19179481), (PMID:24700863), (PMID:26542173)
UniProt PMID:12198173 PMID:15467755 PMID:15538381 PMID:15687258 PMID:18326031 PMID:19179481 PMID:20622884 PMID:22701344 PMID:24700863 PMID:24733888 PMID:25014217 PMID:25106868 PMID:26542173 PMID:27102483 MGI:4818820 MGI:5779430 MGI:5784967 MGI:5784968 MGI:5784976 NCBI chr14:49,372,058...49,379,116
Ensembl chr14:68,247,347...68,255,805
JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 involved_in ISO (PMID:25106868)
(MGI:4818820|PMID:20622884), (MGI:5784976|PMID:22701344)
UniProt PMID:20622884 PMID:22701344 PMID:25106868 MGI:4818820 MGI:5784976 NCBI chr2A:43,311,744...43,315,928 JBrowse link
3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ANGEL2 angel homolog 2 involved_in ISO (PMID:22547059) HGNC PMID:22547059 NCBI chr 1:188,554,632...188,578,497
Ensembl chr 1:193,412,133...193,435,331
JBrowse link
G ELAVL1 ELAV like RNA binding protein 1 involved_in ISO (PMID:14517288), (PMID:26489465), (PMID:29180010)
(MGI:6105829|PMID:27616329)
(PMID:19029303)
UniProt PMID:14517288 PMID:19029303 PMID:26489465 PMID:27616329 PMID:29180010 MGI:6105829 NCBI chr19:7,259,829...7,306,808
Ensembl chr19:8,114,849...8,147,137
JBrowse link
G ELAVL4 ELAV like RNA binding protein 4 involved_in ISO (PMID:12034726) UniProt PMID:12034726 NCBI chr 1:49,288,364...49,444,457
Ensembl chr 1:50,853,276...50,951,058
JBrowse link
G HNRNPA0 heterogeneous nuclear ribonucleoprotein A0 involved_in ISO (MGI:5306322|PMID:12456657) UniProt PMID:12456657 MGI:5306322 NCBI chr 5:133,132,030...133,140,771
Ensembl chr 5:139,277,004...139,277,939
JBrowse link
G HNRNPC heterogeneous nuclear ribonucleoprotein C involved_in ISO (PMID:16010978) UniProt PMID:16010978 NCBI chr14:2,022,280...2,083,215 JBrowse link
G MAPKAPK2 MAPK activated protein kinase 2 involved_in ISO (PMID:14517288), (PMID:15014438), (PMID:20932473) UniProt PMID:14517288 PMID:15014438 PMID:20932473 NCBI chr 1:182,286,854...182,336,306
Ensembl chr 1:186,608,158...186,613,911
JBrowse link
G MYD88 MYD88 innate immune signal transduction adaptor involved_in ISO (PMID:15294994) BHF-UCL PMID:15294994 NCBI chr 3:38,036,565...38,041,014
Ensembl chr 3:38,319,024...38,323,572
JBrowse link
G PTBP1 polypyrimidine tract binding protein 1 ISO RGD PMID:11696543 RGD:10045987 NCBI chr19:319,953...334,945 JBrowse link
G RBM10 RNA binding motif protein 10 acts_upstream_of_or_within ISO (MGI:4367529|PMID:19508861) MGI PMID:19508861 MGI:4367529 NCBI chr  X:39,582,480...39,623,749
Ensembl chr  X:47,440,815...47,481,204
JBrowse link
G RBM38 RNA binding motif protein 38 involved_in ISO (PMID:17050675) UniProt PMID:17050675 NCBI chr20:53,731,641...53,749,688 JBrowse link
G TARDBP TAR DNA binding protein involved_in ISO (PMID:17481916) BHF-UCL PMID:17481916 NCBI chr 1:9,775,084...9,786,710
Ensembl chr 1:10,996,006...11,008,732
JBrowse link
G TIRAP TIR domain containing adaptor protein involved_in ISO (PMID:15294994) BHF-UCL PMID:15294994 NCBI chr11:121,100,558...121,112,844
Ensembl chr11:125,018,064...125,022,309
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in ISO (PMID:15014438) UniProt PMID:15014438 NCBI chr19:36,505,056...36,507,693
Ensembl chr19:45,052,801...45,055,390
JBrowse link
5-methylcytosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TET2 tet methylcytosine dioxygenase 2 involved_in ISO (PMID:24315485) UniProt PMID:24315485 NCBI chr 4:97,612,439...97,745,544
Ensembl chr 4:108,269,082...108,358,400
JBrowse link
acetyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACAT1 acetyl-CoA acetyltransferase 1 involved_in ISO (PMID:17371050) BHF-UCL PMID:17371050 NCBI chr11:103,008,564...103,034,697
Ensembl chr11:106,483,563...106,509,787
JBrowse link
G NUDT7 nudix hydrolase 7 involved_in
acts_upstream_of_or_within
ISO (MGI:6450264|PMID:18799520)
(MGI:2137102|PMID:11415433)
UniProt
MGI
PMID:11415433 PMID:18799520 MGI:2137102 MGI:6450264 NCBI chr16:58,312,917...58,333,256
Ensembl chr16:77,747,863...77,801,651
JBrowse link
adenosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase acts_upstream_of_or_within
involved_in
ISO (MGI:2151677|PMID:11591798), (MGI:3531253|PMID:8663040)
(PMID:8894685)
(PMID:16670267)
(MGI:4835158|PMID:8672487)
(MGI:1095761|PMID:9272950), (MGI:72798|PMID:7731963)
(MGI:74163|PMID:7670465)
(MGI:1095761|PMID:9272950), (MGI:3531253|PMID:8663040), (MGI:3808984|PMID:2015347), (MGI:49990|PMID:1618849), (MGI:59127|PMID:2387582), (MGI:76875|PMID:7592575), (MGI:83255|PMID:8894685)
(MGI:1861066|PMID:10899903), (MGI:2155238|PMID:9478961), (MGI:3525377|PMID:15630442), (MGI:3619310|PMID:14607964), (MGI:3640719|PMID:10720488), (MGI:3664521|PMID:16841096), (MGI:3794903|PMID:18340377)
MGI
UniProt
PMID:1618849 PMID:2015347 PMID:2387582 PMID:7592575 PMID:7670465 PMID:7731963 PMID:8663040 PMID:8672487 PMID:8894685 PMID:9272950 PMID:9478961 PMID:10720488 PMID:10899903 PMID:11591798 PMID:14607964 PMID:15630442 PMID:16670267 PMID:16841096 PMID:18340377 MGI:1095761 MGI:1861066 MGI:2151677 MGI:2155238 MGI:3525377 MGI:3531253 MGI:3619310 MGI:3640719 MGI:3664521 MGI:3794903 MGI:3808984 MGI:4835158 MGI:49990 MGI:59127 MGI:72798 MGI:74163 MGI:76875 MGI:83255 NCBI chr20:40,950,238...40,982,481
Ensembl chr20:42,044,613...42,076,868
JBrowse link
G ADA2 adenosine deaminase 2 involved_in ISO (PMID:20147294) UniProt PMID:20147294 NCBI chr22:606,220...648,902
Ensembl chr22:16,042,295...16,081,949
JBrowse link
G XDH xanthine dehydrogenase involved_in ISO (MGI:6306257|PMID:30936145)
(PMID:1619276)
(MGI:2447927|PMID:12502743)
(MGI:49329|PMID:1590774), (MGI:6478097|PMID:29895374), (MGI:6478533|PMID:8226898)
MGI PMID:1590774 PMID:1619276 PMID:8226898 PMID:12502743 PMID:29895374 PMID:30936145 MGI:2447927 MGI:49329 MGI:6306257 MGI:6478097 MGI:6478533 NCBI chr2A:31,356,011...31,435,111
Ensembl chr2A:31,425,183...31,504,455
JBrowse link
ADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AMPD3 adenosine monophosphate deaminase 3 involved_in ISO (MGI:5917829|PMID:28746349) MGI PMID:28746349 MGI:5917829 NCBI chr11:10,581,730...10,638,777
Ensembl chr11:10,309,436...10,365,369
JBrowse link
G ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 involved_in ISO (MGI:3760051|PMID:17502665) MGI PMID:17502665 MGI:3760051 NCBI chr10:92,365,267...92,511,852
Ensembl chr10:95,828,094...95,983,257
JBrowse link
G NT5E 5'-nucleotidase ecto involved_in ISO (MGI:5917829|PMID:28746349)
(MGI:6478084|PMID:20430891)
MGI PMID:20430891 PMID:28746349 MGI:5917829 MGI:6478084 NCBI chr 6:83,333,428...83,379,585
Ensembl chr 6:86,615,409...86,661,601
JBrowse link
G NUDT9 nudix hydrolase 9 acts_upstream_of_or_within ISO (MGI:2158549|PMID:11825615) MGI PMID:11825615 MGI:2158549 NCBI chr 4:79,718,294...79,755,238
Ensembl chr 4:90,444,772...90,480,786
JBrowse link
alkaloid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CYP3A4 cytochrome P450 family 3 subfamily A member 4 involved_in ISO (PMID:15039299) BHF-UCL PMID:15039299 NCBI chr 7:91,797,037...91,824,696
Ensembl chr 7:105,230,666...105,258,401
JBrowse link
G CYP3A5 cytochrome P450 family 3 subfamily A member 5 involved_in ISO (PMID:15039299) BHF-UCL PMID:15039299 NCBI chr 7:91,621,561...91,654,164
Ensembl chr 7:105,123,437...105,155,322
JBrowse link
AMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in ISO (MGI:6478860|PMID:8064675) MGI PMID:8064675 MGI:6478860 NCBI chr20:40,950,238...40,982,481
Ensembl chr20:42,044,613...42,076,868
JBrowse link
G AMPD3 adenosine monophosphate deaminase 3 involved_in ISO (MGI:5917829|PMID:28746349) MGI PMID:28746349 MGI:5917829 NCBI chr11:10,581,730...10,638,777
Ensembl chr11:10,309,436...10,365,369
JBrowse link
G NT5C1A 5'-nucleotidase, cytosolic IA involved_in ISO (PMID:11133996) MGI PMID:11133996 NCBI chr 1:38,943,479...38,962,804
Ensembl chr 1:40,275,870...40,289,221
JBrowse link
G NT5C1B 5'-nucleotidase, cytosolic IB involved_in ISO (MGI:2153435|PMID:11690631) MGI PMID:11690631 MGI:2153435 NCBI chr2A:18,542,502...18,569,114 JBrowse link
G NT5E 5'-nucleotidase ecto involved_in
acts_upstream_of_or_within
ISO (MGI:5917829|PMID:28746349)
(MGI:6478084|PMID:20430891)
(MGI:3770326|PMID:16547283)
RGD
MGI
PMID:16547283 PMID:20430891 PMID:21414400 PMID:28746349 MGI:3770326 MGI:5917829 MGI:6478084 RGD:5134346 NCBI chr 6:83,333,428...83,379,585
Ensembl chr 6:86,615,409...86,661,601
JBrowse link
G XDH xanthine dehydrogenase involved_in ISO (MGI:6478860|PMID:8064675)
(PMID:1619276)
MGI PMID:1619276 PMID:8064675 MGI:6478860 NCBI chr2A:31,356,011...31,435,111
Ensembl chr2A:31,425,183...31,504,455
JBrowse link
apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DFFB DNA fragmentation factor subunit beta acts_upstream_of_or_within
involved_in
ISO (PMID:15572351)
(PMID:22253444)
RGD
MGI
CAFA
PMID:11425895 PMID:15572351 PMID:22253444 RGD:628524 NCBI chr 1:2,529,733...2,559,490
Ensembl chr 1:3,649,729...3,676,896
JBrowse link
G DNASE1L3 deoxyribonuclease 1 like 3 involved_in
acts_upstream_of_or_within
ISO (PMID:23229555)
(MGI:2385551|PMID:12050166)
UniProt
MGI
PMID:12050166 PMID:23229555 MGI:2385551 NCBI chr 3:58,127,491...58,146,177
Ensembl chr 3:59,542,243...59,560,363
JBrowse link
G ENDOG endonuclease G acts_upstream_of_or_within ISO (MGI:3029597|PMID:14663139) MGI PMID:14663139 MGI:3029597 NCBI chr 9:99,941,856...99,945,957 JBrowse link
G FOXL2 forkhead box L2 involved_in ISO (PMID:16153597) UniProt PMID:16153597 NCBI chr 3:135,968,040...135,980,063 JBrowse link
butyryl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT7 nudix hydrolase 7 involved_in ISO (MGI:6450264|PMID:18799520) UniProt PMID:18799520 MGI:6450264 NCBI chr16:58,312,917...58,333,256
Ensembl chr16:77,747,863...77,801,651
JBrowse link
cAMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDE4D phosphodiesterase 4D involved_in ISO (PMID:20819076) BHF-UCL PMID:20819076 NCBI chr 5:53,510,287...55,039,181
Ensembl chr 5:55,749,214...56,670,111
JBrowse link
carnitine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACADL acyl-CoA dehydrogenase long chain involved_in ISO (MGI:1321427|PMID:9861014) BHF-UCL PMID:9861014 MGI:1321427 NCBI chr2B:97,445,421...97,483,514
Ensembl chr2B:215,847,775...215,885,524
JBrowse link
cellular amide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NIT1 nitrilase 1 involved_in ISO (MGI:5904538|PMID:28373563) UniProt PMID:28373563 MGI:5904538 NCBI chr 1:136,530,490...136,533,619
Ensembl chr 1:140,443,763...140,449,831
JBrowse link
G PM20D1 peptidase M20 domain containing 1 involved_in ISO (PMID:27374330)
(MGI:5796058|PMID:27374330)
UniProt PMID:27374330 MGI:5796058 NCBI chr 1:181,437,045...181,459,103
Ensembl chr 1:185,720,642...185,742,757
JBrowse link
cGMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDE1A phosphodiesterase 1A ISO RGD PMID:16514069 RGD:2312521 NCBI chr2B:69,407,511...69,798,513
Ensembl chr2B:187,215,046...187,604,948
JBrowse link
G PDE2A phosphodiesterase 2A involved_in ISO (PMID:19828435)
(MGI:4420377|PMID:19632989)
UniProt PMID:19632989 PMID:19828435 MGI:4420377 NCBI chr11:67,653,335...67,753,450
Ensembl chr11:70,875,552...70,975,322
JBrowse link
G PDE5A phosphodiesterase 5A acts_upstream_of_or_within ISO (MGI:2450821|PMID:12554648) MGI PMID:12554648 MGI:2450821 NCBI chr 4:111,682,772...111,817,234
Ensembl chr 4:122,832,175...122,966,636
JBrowse link
G PDE9A phosphodiesterase 9A involved_in ISO (PMID:25799991)
(MGI:5634842|PMID:25799991)
(MGI:1266874|PMID:9624145)
UniProt PMID:9624145 PMID:25799991 MGI:1266874 MGI:5634842 NCBI chr21:28,963,181...29,088,395
Ensembl chr21:42,275,697...42,398,681
JBrowse link
CMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UPP1 uridine phosphorylase 1 involved_in ISO (MGI:2683856|PMID:14715930) MGI PMID:14715930 MGI:2683856 NCBI chr 7:48,729,975...48,749,598
Ensembl chr 7:48,838,893...48,858,185
JBrowse link
G UPP2 uridine phosphorylase 2 involved_in ISO (MGI:2683856|PMID:14715930) MGI PMID:14715930 MGI:2683856 NCBI chr2B:45,363,103...45,400,281
Ensembl chr2B:162,496,507...162,636,231
JBrowse link
cobalamin catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CUBN cubilin ISO RGD PMID:14576052 RGD:8554807 NCBI chr10:17,141,464...17,446,867
Ensembl chr10:17,415,551...17,719,129
JBrowse link
coenzyme A catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT7 nudix hydrolase 7 involved_in
acts_upstream_of_or_within
ISO (MGI:6450264|PMID:18799520)
(MGI:2137102|PMID:11415433)
UniProt
MGI
PMID:11415433 PMID:18799520 MGI:2137102 MGI:6450264 NCBI chr16:58,312,917...58,333,256
Ensembl chr16:77,747,863...77,801,651
JBrowse link
CRD-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHX9 DExH-box helicase 9 involved_in ISO (PMID:19029303) UniProt PMID:19029303 NCBI chr 1:158,355,472...158,404,178
Ensembl chr 1:162,006,822...162,055,833
JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in ISO (PMID:19029303) UniProt PMID:19029303 NCBI chr 1:220,450,218...220,461,412
Ensembl chr 1:225,817,899...225,842,031
JBrowse link
G IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 involved_in ISO (PMID:19029303) UniProt PMID:19029303 NCBI chr17:8,479,806...8,538,336
Ensembl chr17:8,468,240...8,519,552
JBrowse link
G SYNCRIP synaptotagmin binding cytoplasmic RNA interacting protein involved_in ISO (PMID:19029303) UniProt PMID:19029303 NCBI chr 6:83,491,803...83,527,256 JBrowse link
G YBX1 Y-box binding protein 1 involved_in ISO (PMID:19029303) UniProt PMID:19029303 NCBI chr 1:41,982,365...42,002,430
Ensembl chr 1:43,360,052...43,380,313
JBrowse link
CTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in ISO (PMID:11278936) UniProt PMID:11278936 NCBI chr10:96,276,454...96,323,287
Ensembl chr10:99,768,566...99,813,568
JBrowse link
CUT catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DIS3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease involved_in ISO (PMID:19056938) UniProt PMID:19056938 NCBI chr13:53,982,914...54,011,076
Ensembl chr13:72,760,610...72,787,325
JBrowse link
G EXOSC10 exosome component 10 involved_in ISO (PMID:19056938) UniProt PMID:19056938 NCBI chr 1:9,829,922...9,865,092
Ensembl chr 1:11,050,727...11,087,241
JBrowse link
G EXOSC3 exosome component 3 involved_in ISO (PMID:19056938) UniProt PMID:19056938 NCBI chr 9:37,611,173...37,634,869
Ensembl chr 9:38,552,659...38,558,078
JBrowse link
cytidine deamination term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AICDA activation induced cytidine deaminase involved_in ISO (MGI:2656023|PMID:12692563) UniProt PMID:12692563 MGI:2656023 NCBI chr12:8,688,392...8,699,008
Ensembl chr12:8,904,273...8,913,917
JBrowse link
G APOBEC3C apolipoprotein B mRNA editing enzyme catalytic subunit 3C involved_in ISO (PMID:21632763) UniProt PMID:21632763 NCBI chr22:19,924,116...19,930,771
Ensembl chr22:37,743,388...37,749,725
JBrowse link
G APOBEC3G apolipoprotein B mRNA editing enzyme catalytic subunit 3G involved_in ISO (PMID:16378963) UniProt PMID:16378963 NCBI chr22:19,977,184...19,994,769 JBrowse link
G CDA cytidine deaminase involved_in ISO (PMID:9596658) RGD
UniProt
PMID:675715 PMID:9596658 RGD:2316616 NCBI chr 1:19,538,696...19,568,008
Ensembl chr 1:20,583,441...20,612,711
JBrowse link
G CDADC1 cytidine and dCMP deaminase domain containing 1 involved_in ISO (PMID:26945630) UniProt PMID:26945630 NCBI chr13:30,386,671...30,432,112
Ensembl chr13:49,138,498...49,186,541
JBrowse link
dADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT18 nudix hydrolase 18 involved_in ISO (PMID:22556419) UniProt PMID:22556419 NCBI chr 8:21,351,840...21,356,915
Ensembl chr 8:18,293,555...18,297,078
JBrowse link
dAMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase involved_in ISO (MGI:3640719|PMID:10720488) MGI PMID:10720488 MGI:3640719 NCBI chr20:40,950,238...40,982,481
Ensembl chr20:42,044,613...42,076,868
JBrowse link
G NT5C1A 5'-nucleotidase, cytosolic IA involved_in ISO (PMID:11133996) MGI PMID:11133996 NCBI chr 1:38,943,479...38,962,804
Ensembl chr 1:40,275,870...40,289,221
JBrowse link
G PNP purine nucleoside phosphorylase involved_in ISO (PMID:6771276) MGI PMID:6771276 NCBI chr14:1,343,921...1,351,670
Ensembl chr14:19,396,114...19,403,907
JBrowse link
G XDH xanthine dehydrogenase involved_in ISO (MGI:6478860|PMID:8064675) MGI PMID:8064675 MGI:6478860 NCBI chr2A:31,356,011...31,435,111
Ensembl chr2A:31,425,183...31,504,455
JBrowse link
dATP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase acts_upstream_of_or_within ISO (MGI:72798|PMID:7731963)
(MGI:76875|PMID:7592575)
(MGI:2155238|PMID:9478961), (MGI:3619310|PMID:14607964)
(MGI:74163|PMID:7670465)
MGI PMID:7592575 PMID:7670465 PMID:7731963 PMID:9478961 PMID:14607964 MGI:2155238 MGI:3619310 MGI:72798 MGI:74163 MGI:76875 NCBI chr20:40,950,238...40,982,481
Ensembl chr20:42,044,613...42,076,868
JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in ISO (PMID:24141705)
(MGI:5828027|PMID:27920203)
UniProt
MGI
PMID:24141705 PMID:27920203 MGI:5828027 NCBI chr20:33,224,200...33,282,018
Ensembl chr20:34,341,367...34,398,314
JBrowse link
dCMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5C 5', 3'-nucleotidase, cytosolic involved_in ISO (MGI:55510|PMID:6301357) MGI PMID:6301357 MGI:55510 NCBI chr17:69,077,021...69,078,998 JBrowse link
G UPP1 uridine phosphorylase 1 involved_in ISO (MGI:73237|PMID:7744869) MGI PMID:7744869 MGI:73237 NCBI chr 7:48,729,975...48,749,598
Ensembl chr 7:48,838,893...48,858,185
JBrowse link
G UPP2 uridine phosphorylase 2 involved_in ISO (PMID:12849978) MGI PMID:12849978 NCBI chr2B:45,363,103...45,400,281
Ensembl chr2B:162,496,507...162,636,231
JBrowse link
dCTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTPP1 dCTP pyrophosphatase 1 involved_in ISO (PMID:24467396) UniProt PMID:24467396 NCBI chr16:24,538,023...24,545,426
Ensembl chr16:30,794,268...30,802,179
JBrowse link
deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT7 CCR4-NOT transcription complex subunit 7 acts_upstream_of_or_within ISO (MGI:3807625|PMID:18625844) MGI PMID:18625844 MGI:3807625 NCBI chr 8:16,439,014...16,459,636
Ensembl chr 8:13,387,288...13,404,445
JBrowse link
G NOCT nocturnin acts_upstream_of_or_within ISO (MGI:3807625|PMID:18625844) MGI PMID:18625844 MGI:3807625 NCBI chr 4:131,378,656...131,409,711
Ensembl chr 4:142,691,169...142,719,514
JBrowse link
G PAN3 poly(A) specific ribonuclease subunit PAN3 acts_upstream_of_or_within ISO (MGI:3807625|PMID:18625844) MGI PMID:18625844 MGI:3807625 NCBI chr13:9,420,405...9,579,859
Ensembl chr13:27,798,607...27,921,266
JBrowse link
G PATL1 PAT1 homolog 1, processing body mRNA decay factor involved_in ISO (PMID:20584987), (PMID:20852261) UniProt PMID:20584987 PMID:20852261 NCBI chr11:54,861,349...54,893,279
Ensembl chr11:58,311,235...58,342,561
JBrowse link
deoxyadenosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADA adenosine deaminase acts_upstream_of_or_within ISO (MGI:1095761|PMID:9272950), (MGI:72798|PMID:7731963)
(MGI:2155238|PMID:9478961), (MGI:3619310|PMID:14607964), (MGI:3640719|PMID:10720488)
(MGI:74163|PMID:7670465)
(MGI:76875|PMID:7592575)
MGI PMID:7592575 PMID:7670465 PMID:7731963 PMID:9272950 PMID:9478961 PMID:10720488 PMID:14607964 MGI:1095761 MGI:2155238 MGI:3619310 MGI:3640719 MGI:72798 MGI:74163 MGI:76875 NCBI chr20:40,950,238...40,982,481
Ensembl chr20:42,044,613...42,076,868
JBrowse link
G PNP purine nucleoside phosphorylase involved_in ISO (PMID:6771276) MGI PMID:6771276 NCBI chr14:1,343,921...1,351,670
Ensembl chr14:19,396,114...19,403,907
JBrowse link
G XDH xanthine dehydrogenase involved_in ISO (MGI:6478860|PMID:8064675) MGI PMID:8064675 MGI:6478860 NCBI chr2A:31,356,011...31,435,111
Ensembl chr2A:31,425,183...31,504,455
JBrowse link
deoxyguanosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GDA guanine deaminase involved_in ISO (MGI:6478860|PMID:8064675) MGI PMID:8064675 MGI:6478860 NCBI chr 9:52,559,752...52,662,886
Ensembl chr 9:70,891,319...70,994,574
JBrowse link
G XDH xanthine dehydrogenase involved_in ISO (MGI:6306257|PMID:30936145), (MGI:6478097|PMID:29895374), (MGI:6478533|PMID:8226898) MGI PMID:8226898 PMID:29895374 PMID:30936145 MGI:6306257 MGI:6478097 MGI:6478533 NCBI chr2A:31,356,011...31,435,111
Ensembl chr2A:31,425,183...31,504,455
JBrowse link
deoxyinosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PNP purine nucleoside phosphorylase involved_in ISO (PMID:6771276) MGI PMID:6771276 NCBI chr14:1,343,921...1,351,670
Ensembl chr14:19,396,114...19,403,907
JBrowse link
G XDH xanthine dehydrogenase involved_in ISO (MGI:2447927|PMID:12502743)
(PMID:1619276)
(MGI:49329|PMID:1590774), (MGI:6478097|PMID:29895374), (MGI:6478533|PMID:8226898)
(MGI:6306257|PMID:30936145)
MGI PMID:1590774 PMID:1619276 PMID:8226898 PMID:12502743 PMID:29895374 PMID:30936145 MGI:2447927 MGI:49329 MGI:6306257 MGI:6478097 MGI:6478533 NCBI chr2A:31,356,011...31,435,111
Ensembl chr2A:31,425,183...31,504,455
JBrowse link
deoxyribonucleoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DERA deoxyribose-phosphate aldolase involved_in ISO (PMID:9226884) UniProt PMID:9226884 NCBI chr12:15,912,337...16,037,778
Ensembl chr12:16,308,938...16,433,916
JBrowse link
deoxyribonucleoside monophosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNPH1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 involved_in ISO (PMID:25108359)
PMID:17234634
UniProt PMID:17234634 PMID:25108359 RGD:8553712 NCBI chr 6:42,817,392...42,821,257 JBrowse link
deoxyribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5C 5', 3'-nucleotidase, cytosolic acts_upstream_of_or_within ISO (MGI:1353788|PMID:10681516) MGI PMID:10681516 MGI:1353788 NCBI chr17:69,077,021...69,078,998 JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in ISO (PMID:23601106), (PMID:26294762) UniProt PMID:23601106 PMID:26294762 NCBI chr20:33,224,200...33,282,018
Ensembl chr20:34,341,367...34,398,314
JBrowse link
dGDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT18 nudix hydrolase 18 involved_in ISO (PMID:22556419) UniProt PMID:22556419 NCBI chr 8:21,351,840...21,356,915
Ensembl chr 8:18,293,555...18,297,078
JBrowse link
dGMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GDA guanine deaminase involved_in ISO (MGI:6478860|PMID:8064675) MGI PMID:8064675 MGI:6478860 NCBI chr 9:52,559,752...52,662,886
Ensembl chr 9:70,891,319...70,994,574
JBrowse link
G NT5C 5', 3'-nucleotidase, cytosolic involved_in ISO (MGI:1353788|PMID:10681516) MGI PMID:10681516 MGI:1353788 NCBI chr17:69,077,021...69,078,998 JBrowse link
G NT5C1A 5'-nucleotidase, cytosolic IA involved_in ISO (PMID:11133996) MGI PMID:11133996 NCBI chr 1:38,943,479...38,962,804
Ensembl chr 1:40,275,870...40,289,221
JBrowse link
G NT5C2 5'-nucleotidase, cytosolic II involved_in ISO (MGI:6478530|PMID:5560407) MGI PMID:5560407 MGI:6478530 NCBI chr10:99,687,366...99,790,744
Ensembl chr10:103,148,578...103,251,513
JBrowse link
G XDH xanthine dehydrogenase involved_in ISO (MGI:6306257|PMID:30936145), (MGI:6478097|PMID:29895374), (MGI:6478533|PMID:8226898) MGI PMID:8226898 PMID:29895374 PMID:30936145 MGI:6306257 MGI:6478097 MGI:6478533 NCBI chr2A:31,356,011...31,435,111
Ensembl chr2A:31,425,183...31,504,455
JBrowse link
dGTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT15 nudix hydrolase 15 involved_in ISO (PMID:22556419) UniProt PMID:22556419 NCBI chr13:29,189,459...29,198,825
Ensembl chr13:47,891,557...47,900,971
JBrowse link
G SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in ISO (PMID:24217394) UniProt PMID:24217394 NCBI chr20:33,224,200...33,282,018
Ensembl chr20:34,341,367...34,398,314
JBrowse link
diadenosine triphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FHIT fragile histidine triad diadenosine triphosphatase involved_in ISO (PMID:8794732) RGD
UniProt
PMID:8794732 PMID:16359767 RGD:2289929 NCBI chr 3:59,670,777...61,177,974 JBrowse link
dITP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT16 nudix hydrolase 16 acts_upstream_of_or_within ISO (MGI:5009783|PMID:20081199) MGI PMID:20081199 MGI:5009783 NCBI chr 3:128,466,119...128,473,186
Ensembl chr 3:135,788,354...135,790,038
JBrowse link
DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DFFB DNA fragmentation factor subunit beta involved_in ISO (PMID:19944011) CAFA PMID:19944011 NCBI chr 1:2,529,733...2,559,490
Ensembl chr 1:3,649,729...3,676,896
JBrowse link
G DNASE1L2 deoxyribonuclease 1 like 2 acts_upstream_of_or_within ISO (MGI:5308183|PMID:21307874) MGI PMID:21307874 MGI:5308183 NCBI chr16:1,093,669...1,096,123
Ensembl chr16:2,336,768...2,338,391
JBrowse link
G TREX1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (MGI:4848004|PMID:20871604)
(MGI:5637600|PMID:25848017)
(MGI:3834787|PMID:18724932), (MGI:4414715|PMID:19923437), (MGI:5562498|PMID:23993650)
MGI PMID:18724932 PMID:19923437 PMID:20871604 PMID:23993650 PMID:25848017 MGI:3834787 MGI:4414715 MGI:4848004 MGI:5562498 MGI:5637600 NCBI chr 3:48,387,762...48,389,693
Ensembl chr 3:49,470,222...49,471,331
JBrowse link
DNA catabolic process, endonucleolytic term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNASE1 deoxyribonuclease 1 involved_in ISO (MGI:6094744|PMID:29191910) UniProt PMID:29191910 MGI:6094744 NCBI chr16:2,532,281...2,583,408
Ensembl chr16:3,708,189...3,758,615
JBrowse link
G DNASE1L3 deoxyribonuclease 1 like 3 involved_in ISO (MGI:6094744|PMID:29191910) UniProt PMID:29191910 MGI:6094744 NCBI chr 3:58,127,491...58,146,177
Ensembl chr 3:59,542,243...59,560,363
JBrowse link
G FBH1 F-box DNA helicase 1 acts_upstream_of_or_within ISO (PMID:23361013) MGI PMID:23361013 NCBI chr10:5,931,389...5,978,844
Ensembl chr10:5,915,713...5,962,778
JBrowse link
G LOC100986203 histone-lysine N-methyltransferase SETMAR involved_in ISO (PMID:24573677)
(PMID:20521842), (PMID:21491884)
UniProt PMID:20521842 PMID:21491884 PMID:24573677 NCBI chr 3:4,256,539...4,271,593
Ensembl chr 3:4,357,890...4,371,791
JBrowse link
G MUS81 MUS81 structure-specific endonuclease subunit acts_upstream_of_or_within ISO (PMID:23361013) MGI PMID:23361013 NCBI chr11:61,220,699...61,226,747
Ensembl chr11:64,549,840...64,555,875
JBrowse link
G REXO4 REX4 homolog, 3'-5' exonuclease involved_in ISO (PMID:21602889) ARUK-UCL PMID:21602889 NCBI chr 9:104,528,838...104,540,813
Ensembl chr 9:133,140,392...133,152,413
JBrowse link
DNA catabolic process, exonucleolytic term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ISG20 interferon stimulated exonuclease gene 20 involved_in ISO (PMID:11401564) UniProt PMID:11401564 NCBI chr15:67,328,334...67,345,085
Ensembl chr15:86,536,647...86,553,751
JBrowse link
G REXO4 REX4 homolog, 3'-5' exonuclease involved_in ISO (PMID:21602889) ARUK-UCL PMID:21602889 NCBI chr 9:104,528,838...104,540,813
Ensembl chr 9:133,140,392...133,152,413
JBrowse link
G XRN2 5'-3' exoribonuclease 2 involved_in ISO (PMID:15565158) UniProt PMID:15565158 NCBI chr20:21,260,871...21,347,430
Ensembl chr20:21,222,138...21,308,561
JBrowse link
DNA replication, removal of RNA primer term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DNA2 DNA replication helicase/nuclease 2 involved_in ISO (PMID:18995831) UniProt PMID:18995831 NCBI chr10:64,898,024...64,956,541
Ensembl chr10:67,207,261...67,264,257
JBrowse link
G FEN1 flap structure-specific endonuclease 1 involved_in ISO (PMID:18995831) UniProt PMID:18995831 NCBI chr11:57,092,270...57,096,828
Ensembl chr11:60,455,474...60,456,616
JBrowse link
dTMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5C 5', 3'-nucleotidase, cytosolic involved_in ISO (MGI:55510|PMID:6301357) MGI PMID:6301357 MGI:55510 NCBI chr17:69,077,021...69,078,998 JBrowse link
G TYMP thymidine phosphorylase involved_in ISO (MGI:2183137|PMID:12077348) MGI PMID:12077348 MGI:2183137 NCBI chr22:30,772,088...30,776,618 JBrowse link
G UPP1 uridine phosphorylase 1 involved_in ISO (MGI:2183137|PMID:12077348) MGI PMID:12077348 MGI:2183137 NCBI chr 7:48,729,975...48,749,598
Ensembl chr 7:48,838,893...48,858,185
JBrowse link
dTTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTPP1 dCTP pyrophosphatase 1 NOT|involved_in ISO (PMID:24467396) UniProt PMID:24467396 NCBI chr16:24,538,023...24,545,426
Ensembl chr16:30,794,268...30,802,179
JBrowse link
dUMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5C 5', 3'-nucleotidase, cytosolic involved_in ISO (MGI:1353788|PMID:10681516) MGI PMID:10681516 MGI:1353788 NCBI chr17:69,077,021...69,078,998 JBrowse link
G NT5M 5',3'-nucleotidase, mitochondrial acts_upstream_of_or_within ISO (MGI:2388903|PMID:12234672) MGI PMID:12234672 MGI:2388903 NCBI chr17:33,948,270...33,991,485 JBrowse link
G UPP1 uridine phosphorylase 1 involved_in ISO (MGI:6478539|PMID:14154460) MGI PMID:14154460 MGI:6478539 NCBI chr 7:48,729,975...48,749,598
Ensembl chr 7:48,838,893...48,858,185
JBrowse link
dUTP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DUT deoxyuridine triphosphatase ISO RGD PMID:1315924 PMID:3032103 RGD:2300191 RGD:2301218 NCBI chr15:27,280,025...27,292,003
Ensembl chr15:45,603,807...45,616,022
JBrowse link
exonucleolytic catabolism of deadenylated mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT6 CCR4-NOT transcription complex subunit 6 involved_in ISO (PMID:20065043) UniProt PMID:20065043 NCBI chr 5:175,695,802...175,780,534
Ensembl chr 5:183,007,081...183,089,997
JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in ISO (PMID:20065043), (PMID:21336257) UniProt PMID:20065043 PMID:21336257 NCBI chr 8:16,439,014...16,459,636
Ensembl chr 8:13,387,288...13,404,445
JBrowse link
G CNOT8 CCR4-NOT transcription complex subunit 8 involved_in ISO (PMID:20065043) UniProt PMID:20065043 NCBI chr 5:150,262,907...150,280,215
Ensembl chr 5:156,256,448...156,274,293
JBrowse link
G EXOSC3 exosome component 3 involved_in ISO (PMID:11782436) UniProt PMID:11782436 NCBI chr 9:37,611,173...37,634,869
Ensembl chr 9:38,552,659...38,558,078
JBrowse link
G EXOSC5 exosome component 5 involved_in ISO (PMID:11782436) UniProt PMID:11782436 NCBI chr19:38,379,884...38,391,309
Ensembl chr19:46,886,326...46,897,703
JBrowse link
G EXOSC9 exosome component 9 involved_in ISO (PMID:11782436) UniProt PMID:11782436 NCBI chr 4:114,001,770...114,017,395
Ensembl chr 4:125,138,668...125,154,288
JBrowse link
fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FITM2 fat storage inducing transmembrane protein 2 involved_in ISO (PMID:32915949) UniProt PMID:32915949 NCBI chr20:40,633,898...40,642,300
Ensembl chr20:41,730,346...41,735,389
JBrowse link
flavin adenine dinucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G VCP valosin containing protein involved_in ISO (PMID:23498975) ParkinsonsUK-UCL PMID:23498975 NCBI chr 9:34,907,147...34,923,227
Ensembl chr 9:35,712,937...35,729,588
JBrowse link
GDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 involved_in ISO (PMID:10858452) UniProt PMID:10858452 NCBI chr 8:22,678,746...22,707,408
Ensembl chr 8:19,571,337...19,635,150
JBrowse link
G NUDT18 nudix hydrolase 18 involved_in ISO (PMID:22556419) UniProt PMID:22556419 NCBI chr 8:21,351,840...21,356,915
Ensembl chr 8:18,293,555...18,297,078
JBrowse link
GMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GDA guanine deaminase involved_in ISO (MGI:6478860|PMID:8064675) MGI PMID:8064675 MGI:6478860 NCBI chr 9:52,559,752...52,662,886
Ensembl chr 9:70,891,319...70,994,574
JBrowse link
G HPRT1 hypoxanthine phosphoribosyltransferase 1 involved_in ISO (PMID:19527031) UniProt PMID:19527031 NCBI chr  X:123,609,248...123,650,102
Ensembl chr  X:133,916,681...133,948,197
JBrowse link
G PRTFDC1 phosphoribosyl transferase domain containing 1 NOT|involved_in ISO (PMID:21054786) UniProt PMID:21054786 NCBI chr10:25,023,015...25,127,770
Ensembl chr10:25,393,227...25,497,054
JBrowse link
G XDH xanthine dehydrogenase involved_in ISO (MGI:6306257|PMID:30936145), (MGI:6478533|PMID:8226898) MGI PMID:8226898 PMID:30936145 MGI:6306257 MGI:6478533 NCBI chr2A:31,356,011...31,435,111
Ensembl chr2A:31,425,183...31,504,455
JBrowse link
guanine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G XDH xanthine dehydrogenase involved_in ISO (MGI:49329|PMID:1590774) MGI PMID:1590774 MGI:49329 NCBI chr2A:31,356,011...31,435,111
Ensembl chr2A:31,425,183...31,504,455
JBrowse link
heme catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BLVRA biliverdin reductase A involved_in ISO (PMID:10858451) UniProt PMID:10858451 NCBI chr 7:40,444,095...40,492,972
Ensembl chr 7:40,489,360...40,526,132
JBrowse link
G BLVRB biliverdin reductase B involved_in ISO (PMID:7929092) UniProt PMID:7929092 NCBI chr19:37,496,344...37,516,127
Ensembl chr19:46,007,321...46,025,120
JBrowse link
G HMOX1 heme oxygenase 1 involved_in ISO (PMID:17915953) RGD
BHF-UCL
PMID:15226268 PMID:17915953 RGD:1547877 NCBI chr22:16,388,368...16,401,289
Ensembl chr22:34,230,825...34,244,063
JBrowse link
heme oxidation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HMOX1 heme oxygenase 1 involved_in ISO (PMID:17915953) BHF-UCL PMID:17915953 NCBI chr22:16,388,368...16,401,289
Ensembl chr22:34,230,825...34,244,063
JBrowse link
histamine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HNMT histamine N-methyltransferase involved_in ISO (PMID:26206890) UniProt PMID:26206890 NCBI chr2B:21,840,342...21,892,744
Ensembl chr2B:142,036,321...142,088,315
JBrowse link
histone mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase involved_in ISO (PMID:16086026) UniProt PMID:16086026 NCBI chr11:103,109,979...103,256,405
Ensembl chr11:106,584,228...106,727,041
JBrowse link
G DCP2 decapping mRNA 2 involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr 5:108,333,091...108,377,119
Ensembl chr 5:114,144,999...114,172,480
JBrowse link
G ERI1 exoribonuclease 1 NOT|involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr 8:10,175,556...10,249,904 JBrowse link
G EXOSC10 exosome component 10 involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr 1:9,829,922...9,865,092
Ensembl chr 1:11,050,727...11,087,241
JBrowse link
G LSM1 LSM1 homolog, mRNA degradation associated involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr 8:37,465,986...37,479,186
Ensembl chr 8:34,642,938...34,656,142
JBrowse link
G MTPAP mitochondrial poly(A) polymerase involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr10:30,463,414...30,500,245
Ensembl chr10:30,818,599...30,854,542
JBrowse link
G TENT2 terminal nucleotidyltransferase 2 involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr 5:35,622,645...35,696,451
Ensembl chr 5:35,893,841...35,966,932
JBrowse link
G TENT4B terminal nucleotidyltransferase 4B involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr16:30,415,668...30,494,758
Ensembl chr16:49,299,498...49,373,665
JBrowse link
G TUT1 terminal uridylyl transferase 1, U6 snRNA-specific NOT|involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr11:57,932,582...57,949,473
Ensembl chr11:61,287,375...61,303,784
JBrowse link
G TUT4 terminal uridylyl transferase 4 NOT|involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr 1:51,684,408...51,815,059
Ensembl chr 1:53,292,477...53,422,893
JBrowse link
G TUT7 terminal uridylyl transferase 7 NOT|involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr 9:57,433,583...57,498,675
Ensembl chr 9:85,486,521...85,554,745
JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in ISO (PMID:16086026) UniProt PMID:16086026 NCBI chr19:18,269,878...18,306,199
Ensembl chr19:19,292,725...19,313,224
JBrowse link
G XRN1 5'-3' exoribonuclease 1 involved_in ISO (PMID:18172165) UniProt PMID:18172165 NCBI chr 3:139,337,337...139,481,479
Ensembl chr 3:146,930,988...147,073,827
JBrowse link
hypoxanthine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G XDH xanthine dehydrogenase involved_in ISO (PMID:1619276)
(MGI:49329|PMID:1590774)
(MGI:6306257|PMID:30936145)
RGD
MGI
PMID:232638 PMID:1590774 PMID:1619276 PMID:30936145 MGI:49329 MGI:6306257 RGD:13210503 NCBI chr2A:31,356,011...31,435,111
Ensembl chr2A:31,425,183...31,504,455
JBrowse link
IDP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT16 nudix hydrolase 16 involved_in ISO (PMID:20385596) UniProt PMID:20385596 NCBI chr 3:128,466,119...128,473,186
Ensembl chr 3:135,788,354...135,790,038
JBrowse link
G NUDT9 nudix hydrolase 9 acts_upstream_of_or_within ISO (MGI:2158549|PMID:11825615) MGI PMID:11825615 MGI:2158549 NCBI chr 4:79,718,294...79,755,238
Ensembl chr 4:90,444,772...90,480,786
JBrowse link
IMP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5C 5', 3'-nucleotidase, cytosolic involved_in ISO (MGI:55510|PMID:6301357) MGI PMID:6301357 MGI:55510 NCBI chr17:69,077,021...69,078,998 JBrowse link
G NT5C1A 5'-nucleotidase, cytosolic IA involved_in ISO (PMID:11133996) MGI PMID:11133996 NCBI chr 1:38,943,479...38,962,804
Ensembl chr 1:40,275,870...40,289,221
JBrowse link
G NT5C2 5'-nucleotidase, cytosolic II involved_in ISO (PMID:21873433) MGI PMID:21873433 NCBI chr10:99,687,366...99,790,744
Ensembl chr10:103,148,578...103,251,513
JBrowse link
G PNP purine nucleoside phosphorylase involved_in ISO (PMID:6771276) MGI PMID:6771276 NCBI chr14:1,343,921...1,351,670
Ensembl chr14:19,396,114...19,403,907
JBrowse link
G XDH xanthine dehydrogenase involved_in ISO (MGI:6478860|PMID:8064675) MGI PMID:8064675 MGI:6478860 NCBI chr2A:31,356,011...31,435,111
Ensembl chr2A:31,425,183...31,504,455
JBrowse link
inosine catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PNP purine nucleoside phosphorylase involved_in
acts_upstream_of_or_within
ISO (PMID:23438750)
(PMID:16964310)
UniProt
MGI
PMID:16964310 PMID:23438750 NCBI chr14:1,343,921...1,351,670
Ensembl chr14:19,396,114...19,403,907
JBrowse link
G XDH xanthine dehydrogenase involved_in ISO (MGI:49329|PMID:1590774), (MGI:6478097|PMID:29895374), (MGI:6478533|PMID:8226898)
(PMID:1619276)
(MGI:2447927|PMID:12502743)
(MGI:6306257|PMID:30936145)
MGI PMID:1590774 PMID:1619276 PMID:8226898 PMID:12502743 PMID:29895374 PMID:30936145 MGI:2447927 MGI:49329 MGI:6306257 MGI:6478097 MGI:6478533 NCBI chr2A:31,356,011...31,435,111
Ensembl chr2A:31,425,183...31,504,455
JBrowse link
ITP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ITPA inosine triphosphatase acts_upstream_of_or_within ISO (MGI:5009783|PMID:20081199) MGI PMID:20081199 MGI:5009783 NCBI chr20:3,295,075...3,309,546
Ensembl chr20:3,056,395...3,070,924
JBrowse link
long-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOT7 acyl-CoA thioesterase 7 involved_in ISO (PMID:10578051) BHF-UCL PMID:10578051 NCBI chr 1:5,030,488...5,154,800 JBrowse link
malonyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MLYCD malonyl-CoA decarboxylase involved_in ISO (PMID:10417274), (PMID:10455107), (PMID:15003260)
(MGI:5501374|PMID:23746352)
UniProt PMID:10417274 PMID:10455107 PMID:15003260 PMID:23746352 MGI:5501374 NCBI chr16:64,520,860...64,537,955
Ensembl chr16:83,912,793...83,929,162
JBrowse link
medium-chain fatty-acyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACOT7 acyl-CoA thioesterase 7 involved_in ISO (PMID:10578051) BHF-UCL PMID:10578051 NCBI chr 1:5,030,488...5,154,800 JBrowse link
G NUDT7 nudix hydrolase 7 involved_in ISO (MGI:6450264|PMID:18799520) UniProt PMID:18799520 MGI:6450264 NCBI chr16:58,312,917...58,333,256
Ensembl chr16:77,747,863...77,801,651
JBrowse link
miRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DIS3L2 DIS3 like 3'-5' exoribonuclease 2 involved_in ISO (PMID:24141620)
(MGI:5494337|PMID:23594738)
(MGI:5603455|PMID:25119025)
UniProt PMID:23594738 PMID:24141620 PMID:25119025 MGI:5494337 MGI:5603455 NCBI chr2B:119,187,659...119,558,347
Ensembl chr2B:238,030,931...238,347,570
JBrowse link
G LIN28A lin-28 homolog A involved_in ISO (PMID:18951094), (PMID:19703396)
(MGI:4359358|PMID:18604195), (MGI:4359360|PMID:18292307)
UniProt PMID:18292307 PMID:18604195 PMID:18951094 PMID:19703396 MGI:4359358 MGI:4359360 NCBI chr 1:25,674,751...25,693,684
Ensembl chr 1:26,739,268...26,758,028
JBrowse link
G LIN28B lin-28 homolog B involved_in ISO (PMID:19703396) UniProt PMID:19703396 NCBI chr 6:102,755,256...102,897,739
Ensembl chr 6:106,640,448...106,772,374
JBrowse link
G PARN poly(A)-specific ribonuclease involved_in ISO (PMID:25049417) UniProt PMID:25049417 NCBI chr16:13,363,879...13,556,054
Ensembl chr16:14,787,881...14,977,786
JBrowse link
G SND1 staphylococcal nuclease and tudor domain containing 1 involved_in ISO (PMID:28546213) UniProt PMID:28546213 NCBI chr 7:119,647,536...120,084,110
Ensembl chr 7:132,302,235...132,738,223
JBrowse link
G TENT4B terminal nucleotidyltransferase 4B involved_in ISO (PMID:25049417) UniProt PMID:25049417 NCBI chr16:30,415,668...30,494,758
Ensembl chr16:49,299,498...49,373,665
JBrowse link
G TUT4 terminal uridylyl transferase 4 involved_in ISO (PMID:19703396) UniProt PMID:19703396 NCBI chr 1:51,684,408...51,815,059
Ensembl chr 1:53,292,477...53,422,893
JBrowse link
mitochondrial mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PDE12 phosphodiesterase 12 involved_in ISO (PMID:21245038), (PMID:21666256) UniProt PMID:21245038 PMID:21666256 NCBI chr 3:57,489,602...57,502,240
Ensembl chr 3:58,696,083...58,699,719
JBrowse link
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO (PMID:20691904)
(MGI:4881376|PMID:20691904)
UniProt PMID:20691904 MGI:4881376 NCBI chr2A:55,792,412...55,848,242
Ensembl chr2A:56,931,365...56,986,326
JBrowse link
G SUPV3L1 Suv3 like RNA helicase involved_in ISO (PMID:19864255) UniProt PMID:19864255 NCBI chr10:65,647,273...65,676,179
Ensembl chr10:68,180,671...68,209,538
JBrowse link
mitochondrial mRNA surveillance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SUPV3L1 Suv3 like RNA helicase involved_in ISO (PMID:19864255) UniProt PMID:19864255 NCBI chr10:65,647,273...65,676,179
Ensembl chr10:68,180,671...68,209,538
JBrowse link
mitochondrial ncRNA surveillance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SUPV3L1 Suv3 like RNA helicase involved_in ISO (PMID:19864255) UniProt PMID:19864255 NCBI chr10:65,647,273...65,676,179
Ensembl chr10:68,180,671...68,209,538
JBrowse link
mitochondrial RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO (PMID:18501193) UniProt PMID:18501193 NCBI chr2A:55,792,412...55,848,242
Ensembl chr2A:56,931,365...56,986,326
JBrowse link
mitochondrial RNA surveillance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SUPV3L1 Suv3 like RNA helicase involved_in ISO (PMID:19864255) UniProt PMID:19864255 NCBI chr10:65,647,273...65,676,179
Ensembl chr10:68,180,671...68,209,538
JBrowse link
mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO4 argonaute RISC component 4 involved_in ISO (PMID:18771919) UniProt PMID:18771919 NCBI chr 1:35,072,045...35,122,418
Ensembl chr 1:36,249,038...36,299,259
JBrowse link
G DCP2 decapping mRNA 2 involved_in ISO (PMID:21070968), (PMID:28002401)
(MGI:4849882|PMID:21070968)
UniProt PMID:21070968 PMID:28002401 MGI:4849882 NCBI chr 5:108,333,091...108,377,119
Ensembl chr 5:114,144,999...114,172,480
JBrowse link
G DXO decapping exoribonuclease involved_in ISO (PMID:29601584)
(MGI:6368104|PMID:28283058)
(MGI:5488528|PMID:23523372)
UniProt PMID:23523372 PMID:28283058 PMID:29601584 MGI:5488528 MGI:6368104 NCBI chr 6:31,630,523...31,632,363
Ensembl chr 6:32,517,086...32,519,566
JBrowse link
G HSPA1A heat shock protein family A (Hsp70) member 1A involved_in ISO (PMID:10205060) UniProt PMID:10205060 NCBI chr 6:31,476,710...31,491,411 JBrowse link
G KHSRP KH-type splicing regulatory protein acts_upstream_of_or_within ISO (MGI:5439239|PMID:22844247) MGI PMID:22844247 MGI:5439239 NCBI chr19:5,433,989...5,445,721 JBrowse link
G LOC100968913 argonaute RISC catalytic component 3 involved_in ISO (PMID:18771919) UniProt PMID:18771919 NCBI chr 1:35,196,371...35,322,220
Ensembl chr 1:36,372,221...36,497,190
JBrowse link
G LSM2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within ISO (PMID:12515382) MGI PMID:12515382 NCBI chr 6:31,458,514...31,468,126
Ensembl chr 6:32,344,669...32,354,631
JBrowse link
G LSM5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within ISO (PMID:12515382) MGI PMID:12515382 NCBI chr 7:33,094,545...33,104,489 JBrowse link
G LSM6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated acts_upstream_of_or_within ISO (PMID:12515382) MGI PMID:12515382 NCBI chr 4:138,514,194...138,528,575
Ensembl chr 4:150,171,648...150,185,947
JBrowse link
G METTL14 methyltransferase like 14 involved_in ISO (MGI:5927282|PMID:28965759) UniProt PMID:28965759 MGI:5927282 NCBI chr 4:110,879,137...110,905,131
Ensembl chr 4:121,431,026...121,458,392
JBrowse link
G METTL16 methyltransferase like 16 involved_in ISO (MGI:6114846|PMID:29262316) UniProt PMID:29262316 MGI:6114846 NCBI chr17:2,407,331...2,500,418
Ensembl chr17:2,292,498...2,376,277
JBrowse link
G METTL3 methyltransferase like 3 involved_in ISO (MGI:5927282|PMID:28965759), (MGI:6094929|PMID:28792938), (MGI:6095345|PMID:28637692) UniProt PMID:28637692 PMID:28792938 PMID:28965759 MGI:5927282 MGI:6094929 MGI:6095345 NCBI chr14:2,315,868...2,329,460
Ensembl chr14:20,392,665...20,405,906
JBrowse link
G NANOS2 nanos C2HC-type zinc finger 2 involved_in ISO (MGI:4431145|PMID:20133598) UniProt PMID:20133598 MGI:4431145 NCBI chr19:42,922,655...42,924,679
Ensembl chr19:51,459,529...51,459,945
JBrowse link
G NUDT12 nudix hydrolase 12 involved_in ISO (MGI:6368680|PMID:31101919) UniProt PMID:31101919 MGI:6368680 NCBI chr 5:98,903,740...98,917,763
Ensembl chr 5:104,601,373...104,617,925
JBrowse link
G NUDT16 nudix hydrolase 16 involved_in ISO (PMID:21070968), (PMID:21337011)
(MGI:4849882|PMID:21070968)
UniProt PMID:21070968 PMID:21337011 MGI:4849882 NCBI chr 3:128,466,119...128,473,186
Ensembl chr 3:135,788,354...135,790,038
JBrowse link
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO (PMID:12721301), (PMID:16055741) UniProt PMID:12721301 PMID:16055741 NCBI chr2A:55,792,412...55,848,242
Ensembl chr2A:56,931,365...56,986,326
JBrowse link
G RIDA reactive intermediate imine deaminase A homolog involved_in ISO (PMID:30930054) UniProt PMID:30930054 NCBI chr 8:94,739,120...94,753,934
Ensembl chr 8:96,923,776...96,938,512
JBrowse link
G SLFN14 schlafen family member 14 involved_in ISO (PMID:25996083)
(MGI:5705207|PMID:25996083)
UniProt PMID:25996083 MGI:5705207 NCBI chr17:21,232,934...21,250,368
Ensembl chr17:21,530,009...21,539,589
JBrowse link
G YTHDF2 YTH N6-methyladenosine RNA binding protein 2 involved_in ISO (PMID:27558897), (PMID:30559377), (PMID:30930054)
(MGI:6316439|PMID:29855337), (MGI:6316688|PMID:30065315), (MGI:6317061|PMID:30150673)
UniProt PMID:27558897 PMID:29855337 PMID:30065315 PMID:30150673 PMID:30559377 PMID:30930054 MGI:6316439 MGI:6316688 MGI:6317061 NCBI chr 1:28,007,592...28,041,179
Ensembl chr 1:29,038,831...29,070,533
JBrowse link
G ZC3H12D zinc finger CCCH-type containing 12D acts_upstream_of_or_within ISO (MGI:5567042|PMID:24415781) MGI PMID:24415781 MGI:5567042 NCBI chr 6:147,266,039...147,304,289
Ensembl chr 6:151,974,485...151,999,898
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in
acts_upstream_of_or_within
ISO (PMID:10330172), (PMID:20221403)
(PMID:10751406), (PMID:11782475)
UniProt
MGI
PMID:10330172 PMID:10751406 PMID:11782475 PMID:20221403 NCBI chr19:36,505,056...36,507,693
Ensembl chr19:45,052,801...45,055,390
JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 involved_in ISO (MGI:5320815|PMID:22367205) UniProt PMID:22367205 MGI:5320815 NCBI chr2A:43,311,744...43,315,928 JBrowse link
G ZHX2 zinc fingers and homeoboxes 2 acts_upstream_of_or_within ISO (MGI:49288|PMID:1370712) MGI PMID:1370712 MGI:49288 NCBI chr 8:119,473,607...119,668,790
Ensembl chr 8:122,401,567...122,404,080
JBrowse link
mRNA destabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELF1 CUGBP Elav-like family member 1 involved_in ISO PMID:30508596 ARUK-UCL PMID:30508596 RGD:38501076 NCBI chr11:47,415,600...47,515,254
Ensembl chr11:47,967,831...48,008,487
JBrowse link
G CNOT6L CCR4-NOT transcription complex subunit 6 like acts_upstream_of_or_within ISO (MGI:3828348|PMID:17452450) MGI PMID:17452450 MGI:3828348 NCBI chr 4:46,374,255...46,482,552
Ensembl chr 4:52,263,010...52,320,307
JBrowse link
G FTO FTO alpha-ketoglutarate dependent dioxygenase involved_in ISO (PMID:28002401), (PMID:30197295) UniProt PMID:28002401 PMID:30197295 NCBI chr16:33,939,300...34,343,419
Ensembl chr16:53,023,425...53,490,231
JBrowse link
G GIGYF2 GRB10 interacting GYF protein 2 involved_in ISO (PMID:27157137) ParkinsonsUK-UCL PMID:27157137 NCBI chr2B:119,929,004...120,090,367
Ensembl chr2B:238,847,674...239,007,549
JBrowse link
G HNRNPR heterogeneous nuclear ribonucleoprotein R ISO RGD PMID:15798208 RGD:9854643 NCBI chr 1:22,501,816...22,536,050
Ensembl chr 1:23,491,310...23,521,977
JBrowse link
G METTL14 methyltransferase like 14 involved_in ISO (MGI:5559905|PMID:24394384), (MGI:5927282|PMID:28965759) UniProt PMID:24394384 PMID:28965759 MGI:5559905 MGI:5927282 NCBI chr 4:110,879,137...110,905,131
Ensembl chr 4:121,431,026...121,458,392
JBrowse link
G METTL16 methyltransferase like 16 involved_in ISO (MGI:6114846|PMID:29262316) UniProt PMID:29262316 MGI:6114846 NCBI chr17:2,407,331...2,500,418
Ensembl chr17:2,292,498...2,376,277
JBrowse link
G METTL3 methyltransferase like 3 involved_in ISO (MGI:5559905|PMID:24394384), (MGI:5621227|PMID:25569111), (MGI:5621254|PMID:25456834), (MGI:5927282|PMID:28965759), (MGI:6094929|PMID:28792938), (MGI:6095345|PMID:28637692) UniProt PMID:24394384 PMID:25456834 PMID:25569111 PMID:28637692 PMID:28792938 PMID:28965759 MGI:5559905 MGI:5621227 MGI:5621254 MGI:5927282 MGI:6094929 MGI:6095345 NCBI chr14:2,315,868...2,329,460
Ensembl chr14:20,392,665...20,405,906
JBrowse link
G PUM1 pumilio RNA binding family member 1 involved_in ISO (MGI:5640888|PMID:25768905) UniProt PMID:25768905 MGI:5640888 NCBI chr 1:30,205,584...30,341,979
Ensembl chr 1:31,230,268...31,364,348
JBrowse link
G RBM24 RNA binding motif protein 24 involved_in ISO (PMID:29104163) UniProt PMID:29104163 NCBI chr 6:17,140,450...17,153,035 JBrowse link
G RIDA reactive intermediate imine deaminase A homolog involved_in ISO (PMID:30930054) UniProt PMID:30930054 NCBI chr 8:94,739,120...94,753,934
Ensembl chr 8:96,923,776...96,938,512
JBrowse link
G ROCK1 Rho associated coiled-coil containing protein kinase 1 involved_in ISO (MGI:6271078|PMID:29353861) ARUK-UCL PMID:29353861 MGI:6271078 NCBI chr18:14,192,293...14,352,357
Ensembl chr18:17,833,047...17,990,086
JBrowse link
G ROCK2 Rho associated coiled-coil containing protein kinase 2 involved_in ISO (MGI:6271078|PMID:29353861) ARUK-UCL PMID:29353861 MGI:6271078 NCBI chr2A:11,167,353...11,331,339
Ensembl chr2A:11,318,370...11,478,986
JBrowse link
G YTHDF1 YTH N6-methyladenosine RNA binding protein 1 involved_in ISO (PMID:32492408)
(MGI:6490006|PMID:32943573)
UniProt PMID:32492408 PMID:32943573 MGI:6490006 NCBI chr20:59,575,703...59,596,447
Ensembl chr20:61,116,645...61,135,769
JBrowse link
G YTHDF2 YTH N6-methyladenosine RNA binding protein 2 involved_in ISO (PMID:28106072), (PMID:32169943)
(MGI:6316439|PMID:29855337), (MGI:6316688|PMID:30065315), (MGI:6317061|PMID:30150673), (MGI:6490006|PMID:32943573), (MGI:6508516|PMID:31959747)
(PMID:27558897), (PMID:30559377), (PMID:30930054), (PMID:32492408)
UniProt PMID:27558897 PMID:28106072 PMID:29855337 PMID:30065315 PMID:30150673 PMID:30559377 PMID:30930054 PMID:31959747 PMID:32169943 PMID:32492408 PMID:32943573 MGI:6316439 MGI:6316688 MGI:6317061 MGI:6490006 MGI:6508516 NCBI chr 1:28,007,592...28,041,179
Ensembl chr 1:29,038,831...29,070,533
JBrowse link
G YTHDF3 YTH N6-methyladenosine RNA binding protein 3 involved_in ISO (PMID:32492408)
(MGI:6490006|PMID:32943573)
(PMID:28106072)
UniProt PMID:28106072 PMID:32492408 PMID:32943573 MGI:6490006 NCBI chr 8:59,701,341...59,742,865
Ensembl chr 8:61,375,832...61,413,911
JBrowse link
mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APOBEC1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 acts_upstream_of_or_within ISO (MGI:3057047|PMID:15480992) MGI PMID:15480992 MGI:3057047 NCBI chr12:7,777,734...7,793,960
Ensembl chr12:7,939,262...7,944,203
JBrowse link
G AXIN2 axin 2 involved_in ISO (PMID:17072303) BHF-UCL PMID:17072303 NCBI chr17:59,476,336...59,509,358
Ensembl chr17:64,688,416...64,720,086
JBrowse link
G CIRBP cold inducible RNA binding protein involved_in ISO (PMID:11574538) UniProt PMID:11574538
G DICER1 dicer 1, ribonuclease III acts_upstream_of_or_within ISO (MGI:5439239|PMID:22844247) MGI PMID:22844247 MGI:5439239 NCBI chr14:75,709,029...75,780,779
Ensembl chr14:95,036,385...95,107,940
JBrowse link
G E2F1 E2F transcription factor 1 involved_in ISO (PMID:15766563) BHF-UCL PMID:15766563 NCBI chr20:29,963,083...29,973,860
Ensembl chr20:31,103,764...31,110,604
JBrowse link
G EIF4ENIF1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in ISO (PMID:24335285), (PMID:32354837) UniProt PMID:24335285 PMID:32354837 NCBI chr22:12,463,859...12,515,953
Ensembl chr22:30,322,502...30,378,322
JBrowse link
G ELAVL1 ELAV like RNA binding protein 1 involved_in
acts_upstream_of_or_within
ISO (PMID:19029303)
(PMID:21613615)
(PMID:31358969)
(MGI:5922838|PMID:27609837)
(MGI:3037407|PMID:14976220), (MGI:5287957|PMID:21613615)
(MGI:5559905|PMID:24394384)
UniProt
MGI
CACAO
PMID:14976220 PMID:19029303 PMID:21613615 PMID:24394384 PMID:27609837 PMID:31358969 MGI:3037407 MGI:5287957 MGI:5559905 MGI:5922838 NCBI chr19:7,259,829...7,306,808
Ensembl chr19:8,114,849...8,147,137
JBrowse link
G FUS FUS RNA binding protein acts_upstream_of_or_within ISO (PMID:27378374) MGI PMID:27378374 NCBI chr16:23,775,389...23,786,881
Ensembl chr16:31,551,135...31,562,327
JBrowse link
G GDNF glial cell derived neurotrophic factor involved_in ISO (PMID:12358785) BHF-UCL PMID:12358785 NCBI chr 5:72,539,374...72,566,918
Ensembl chr 5:77,577,313...77,601,362
JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D ISO RGD PMID:15192077 RGD:1357938 NCBI chr 4:41,825,518...41,846,166
Ensembl chr 4:47,676,599...47,696,894
JBrowse link
G HNRNPU heterogeneous nuclear ribonucleoprotein U involved_in ISO (PMID:17174306) UniProt PMID:17174306 NCBI chr 1:220,450,218...220,461,412
Ensembl chr 1:225,817,899...225,842,031
JBrowse link
G IKBKE inhibitor of nuclear factor kappa B kinase subunit epsilon involved_in ISO (MGI:5291883|PMID:21822257) MGI PMID:21822257 MGI:5291883 NCBI chr 1:182,070,565...182,096,797
Ensembl chr 1:186,351,807...186,377,971
JBrowse link
G LARP1 La ribonucleoprotein 1, translational regulator involved_in ISO (PMID:25940091), (PMID:28673543) UniProt PMID:25940091 PMID:28673543 NCBI chr 5:150,086,829...150,221,401
Ensembl chr 5:156,112,358...156,216,706
JBrowse link
G MAPKAPK2 MAPK activated protein kinase 2 acts_upstream_of_or_within ISO (MGI:2158083|PMID:11741878) MGI PMID:11741878 MGI:2158083 NCBI chr 1:182,286,854...182,336,306
Ensembl chr 1:186,608,158...186,613,911
JBrowse link
G MEIOC meiosis specific with coiled-coil domain involved_in ISO (MGI:5770021|PMID:26742488) UniProt PMID:26742488 MGI:5770021 NCBI chr17:12,725,114...12,744,974
Ensembl chr17:12,901,882...12,920,285
JBrowse link
G MTOR mechanistic target of rapamycin kinase ISO RGD PMID:21073857 RGD:10040969 NCBI chr 1:9,871,700...10,028,704
Ensembl chr 1:11,093,765...11,249,841
JBrowse link
G NOCT nocturnin involved_in ISO (MGI:5308514|PMID:22073225) UniProt PMID:22073225 MGI:5308514 NCBI chr 4:131,378,656...131,409,711
Ensembl chr 4:142,691,169...142,719,514
JBrowse link
G QKI QKI, KH domain containing RNA binding ISO RGD PMID:16855020 RGD:10045995 NCBI chr 6:161,361,413...161,523,414 JBrowse link
G RBM24 RNA binding motif protein 24 involved_in ISO (PMID:29104163) UniProt PMID:29104163 NCBI chr 6:17,140,450...17,153,035 JBrowse link
G RBM46 RNA binding motif protein 46 acts_upstream_of_or_within ISO (MGI:5644240|PMID:25397698) MGI PMID:25397698 MGI:5644240 NCBI chr 4:147,148,767...147,196,342
Ensembl chr 4:158,966,658...159,014,240
JBrowse link
G SLC11A1 solute carrier family 11 member 1 acts_upstream_of_or_within ISO (MGI:85148|PMID:9009318) MGI PMID:9009318 MGI:85148 NCBI chr2B:105,640,613...105,655,524
Ensembl chr2B:224,238,284...224,252,941
JBrowse link
G SRSF1 serine and arginine rich splicing factor 1 involved_in ISO (MGI:5291882|PMID:21822258) MGI PMID:21822258 MGI:5291882 NCBI chr17:52,083,676...52,087,454
Ensembl chr17:56,937,295...56,944,425
JBrowse link
G TAF15 TATA-box binding protein associated factor 15 acts_upstream_of_or_within ISO (PMID:27378374) MGI PMID:27378374 NCBI chr17:20,948,186...20,985,925 JBrowse link
G TENT5C terminal nucleotidyltransferase 5C involved_in ISO (PMID:28931820)
(MGI:5926094|PMID:28931820)
UniProt PMID:28931820 MGI:5926094 NCBI chr 1:84,894,428...84,916,868
Ensembl chr 1:119,893,916...119,895,091
JBrowse link
G THRAP3 thyroid hormone receptor associated protein 3 involved_in ISO (PMID:18794151) UniProt PMID:18794151 NCBI chr 1:35,492,918...35,572,896
Ensembl chr 1:36,719,770...36,741,355
JBrowse link
G TRAF2 TNF receptor associated factor 2 involved_in ISO (MGI:5291882|PMID:21822258) MGI PMID:21822258 MGI:5291882 NCBI chr 9:107,938,935...107,984,797
Ensembl chr 9:136,917,358...136,955,331
JBrowse link
G TRAF3IP2 TRAF3 interacting protein 2 involved_in ISO (MGI:5291882|PMID:21822258)
(MGI:4355787|PMID:17785852)
MGI PMID:17785852 PMID:21822258 MGI:4355787 MGI:5291882 NCBI chr 6:109,367,333...109,414,601
Ensembl chr 6:113,444,005...113,485,533
JBrowse link
G TRAF5 TNF receptor associated factor 5 involved_in ISO (MGI:5291882|PMID:21822258) MGI PMID:21822258 MGI:5291882 NCBI chr 1:186,889,615...186,938,416
Ensembl chr 1:191,754,652...191,802,075
JBrowse link
G VEGFA vascular endothelial growth factor A ISO RGD PMID:12881220 RGD:1580563 NCBI chr 6:43,361,053...43,377,366
Ensembl chr 6:44,650,365...44,666,353
JBrowse link
G YBX1 Y-box binding protein 1 involved_in ISO (PMID:31358969) UniProt PMID:31358969 NCBI chr 1:41,982,365...42,002,430
Ensembl chr 1:43,360,052...43,380,313
JBrowse link
G YBX2 Y-box binding protein 2 acts_upstream_of_or_within ISO (MGI:3696301|PMID:17035640) MGI PMID:17035640 MGI:3696301 NCBI chr17:7,319,186...7,325,594
Ensembl chr17:7,306,548...7,312,632
JBrowse link
NAD catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT12 nudix hydrolase 12 involved_in
acts_upstream_of_or_within
ISO (PMID:12790796) MGI PMID:12790796 NCBI chr 5:98,903,740...98,917,763
Ensembl chr 5:104,601,373...104,617,925
JBrowse link
G SARM1 sterile alpha and TIR motif containing 1 involved_in ISO (PMID:25908823), (PMID:27671644), (PMID:28334607), (PMID:31128467), (PMID:31439792), (PMID:31439793), (PMID:32049506), (PMID:32828421), (PMID:33053563)
(MGI:6206974|PMID:27735788), (MGI:6508517|PMID:32312889)
(MGI:6114587|PMID:28334607)
UniProt PMID:25908823 PMID:27671644 PMID:27735788 PMID:28334607 PMID:31128467 PMID:31439792 PMID:31439793 PMID:32049506 PMID:32312889 PMID:32828421 PMID:33053563 MGI:6114587 MGI:6206974 MGI:6508517 NCBI chr17:28,370,206...28,403,440
Ensembl chr17:28,878,498...28,905,363
JBrowse link
G TIGD7 tigger transposable element derived 7 involved_in ISO (MGI:5426136|PMID:11011142) UniProt PMID:11011142 MGI:5426136 NCBI chr16:2,229,601...2,236,195
Ensembl chr16:3,408,055...3,409,704
JBrowse link
NADP catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT12 nudix hydrolase 12 involved_in
acts_upstream_of_or_within
ISO (PMID:12790796) MGI PMID:12790796 NCBI chr 5:98,903,740...98,917,763
Ensembl chr 5:104,601,373...104,617,925
JBrowse link
G NUDT13 nudix hydrolase 13 involved_in ISO (MGI:6368098|PMID:28755312) UniProt PMID:28755312 MGI:6368098 NCBI chr10:69,656,828...69,696,769
Ensembl chr10:72,118,281...72,139,221
JBrowse link
ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TENT4B terminal nucleotidyltransferase 4B involved_in ISO (PMID:26950371) BHF-UCL PMID:26950371 NCBI chr16:30,415,668...30,494,758
Ensembl chr16:49,299,498...49,373,665
JBrowse link
negative regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G METTL16 methyltransferase like 16 involved_in ISO (PMID:28525753) UniProt PMID:28525753 NCBI chr17:2,407,331...2,500,418
Ensembl chr17:2,292,498...2,376,277
JBrowse link
negative regulation of apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DFFA DNA fragmentation factor subunit alpha acts_upstream_of_or_within ISO (MGI:2182584|PMID:10601318), (MGI:3029597|PMID:14663139)
(PMID:15572351)
MGI PMID:10601318 PMID:14663139 PMID:15572351 MGI:2182584 MGI:3029597 NCBI chr 1:9,221,096...9,232,813
Ensembl chr 1:10,445,553...10,457,547
JBrowse link
G NMNAT1 nicotinamide nucleotide adenylyltransferase 1 ISO RGD PMID:27184051 RGD:13781945 NCBI chr 1:8,712,798...8,753,027
Ensembl chr 1:9,942,491...9,982,364
JBrowse link
G PAM16 presequence translocase associated motor 16 ISO RGD PMID:24069394 RGD:13462066 NCBI chr16:3,257,769...3,278,322 JBrowse link
negative regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EIF4ENIF1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in ISO (PMID:32354837) UniProt PMID:32354837 NCBI chr22:12,463,859...12,515,953
Ensembl chr22:30,322,502...30,378,322
JBrowse link
negative regulation of DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RGN regucalcin ISO RGD PMID:2001740 RGD:9590215 NCBI chr  X:39,513,135...39,530,188
Ensembl chr  X:47,371,226...47,388,881
JBrowse link
negative regulation of miRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TENT2 terminal nucleotidyltransferase 2 involved_in ISO (PMID:23200856) UniProt PMID:23200856 NCBI chr 5:35,622,645...35,696,451
Ensembl chr 5:35,893,841...35,966,932
JBrowse link
negative regulation of mitochondrial RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRPPRC leucine rich pentatricopeptide repeat containing acts_upstream_of_or_within ISO (MGI:5438202|PMID:22045337)
(MGI:5301479|PMID:21880015)
MGI PMID:21880015 PMID:22045337 MGI:5301479 MGI:5438202 NCBI chr2A:43,975,949...44,083,846
Ensembl chr2A:44,914,578...45,021,434
JBrowse link
G SLIRP SRA stem-loop interacting RNA binding protein acts_upstream_of_or_within ISO (MGI:5438202|PMID:22045337) MGI PMID:22045337 MGI:5438202 NCBI chr14:58,262,126...58,271,829
Ensembl chr14:77,462,875...77,516,882
JBrowse link
negative regulation of mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FMR1 FMRP translational regulator 1 involved_in ISO (PMID:25225333) CAFA PMID:25225333 NCBI chr  X:136,937,889...136,976,828
Ensembl chr  X:147,365,748...147,405,321
JBrowse link
G PKP1 plakophilin 1 involved_in ISO (PMID:25225333) CAFA PMID:25225333 NCBI chr 1:176,881,154...176,930,814
Ensembl chr 1:181,182,829...181,232,347
JBrowse link
G PKP3 plakophilin 3 involved_in ISO (PMID:25225333) CAFA PMID:25225333 NCBI chr11:393,047...402,928
Ensembl chr11:433,326...441,325
JBrowse link
negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DHX34 DExH-box helicase 34 involved_in ISO (PMID:23828042) UniProt PMID:23828042 NCBI chr19:44,337,299...44,371,403
Ensembl chr19:52,996,392...53,026,046
JBrowse link
G NBAS NBAS subunit of NRZ tethering complex involved_in ISO (PMID:23828042) UniProt PMID:23828042 NCBI chr2A:15,159,193...15,552,121
Ensembl chr2A:15,293,512...15,685,820
JBrowse link
G PABPC1 poly(A) binding protein cytoplasmic 1 involved_in ISO (PMID:18447585) UniProt PMID:18447585 NCBI chr 8:97,346,433...97,365,628
Ensembl chr 8:99,518,347...99,537,614
JBrowse link
G SECISBP2 SECIS binding protein 2 acts_upstream_of_or_within ISO (MGI:5582859|PMID:24274065) MGI PMID:24274065 MGI:5582859 NCBI chr 9:60,408,272...60,456,945
Ensembl chr 9:88,454,531...88,498,095
JBrowse link
negative regulation of nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TENT4A terminal nucleotidyltransferase 4A involved_in ISO (PMID:30026317) UniProt PMID:30026317 NCBI chr 5:7,032,809...7,077,080
Ensembl chr 5:6,724,029...6,752,159
JBrowse link
G TENT4B terminal nucleotidyltransferase 4B involved_in ISO (PMID:30026317) UniProt PMID:30026317 NCBI chr16:30,415,668...30,494,758
Ensembl chr16:49,299,498...49,373,665
JBrowse link
G TOB1 transducer of ERBB2, 1 involved_in ISO (PMID:18377426) UniProt PMID:18377426 NCBI chr17:44,953,343...44,957,465
Ensembl chr17:49,825,646...49,826,683
JBrowse link
negative regulation of RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NRDE2 NRDE-2, necessary for RNA interference, domain containing involved_in ISO (PMID:30842217) UniProt PMID:30842217 NCBI chr14:70,895,376...70,949,969
Ensembl chr14:90,247,035...90,300,705
JBrowse link
nicotinamide riboside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MTAP methylthioadenosine phosphorylase NOT|involved_in ISO (PMID:19001417) UniProt PMID:19001417 NCBI chr 9:21,637,543...21,769,698
Ensembl chr 9:22,266,376...22,382,218
JBrowse link
G PNP purine nucleoside phosphorylase involved_in ISO (PMID:19001417) UniProt PMID:19001417 NCBI chr14:1,343,921...1,351,670
Ensembl chr14:19,396,114...19,403,907
JBrowse link
nitrate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100990437 NADPH--cytochrome P450 reductase ISO RGD PMID:16527817 RGD:4889831 NCBI chr 7:68,035,021...68,105,934
Ensembl chr 7:82,364,418...82,437,530
JBrowse link
nitric oxide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC100990437 NADPH--cytochrome P450 reductase ISO RGD PMID:19152507 RGD:2316786 NCBI chr 7:68,035,021...68,105,934
Ensembl chr 7:82,364,418...82,437,530
JBrowse link
nuclear histone mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SSB small RNA binding exonuclease protection factor La involved_in ISO (PMID:9154801) CAFA PMID:9154801 NCBI chr2B:57,071,158...57,084,428
Ensembl chr2B:174,536,382...174,549,604
JBrowse link
nuclear mRNA surveillance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DXO decapping exoribonuclease involved_in ISO (MGI:5488528|PMID:23523372) UniProt PMID:23523372 MGI:5488528 NCBI chr 6:31,630,523...31,632,363
Ensembl chr 6:32,517,086...32,519,566
JBrowse link
G EXOSC10 exosome component 10 involved_in ISO (PMID:17545563) UniProt PMID:17545563 NCBI chr 1:9,829,922...9,865,092
Ensembl chr 1:11,050,727...11,087,241
JBrowse link
G EXOSC9 exosome component 9 involved_in ISO (PMID:17545563) UniProt PMID:17545563 NCBI chr 4:114,001,770...114,017,395
Ensembl chr 4:125,138,668...125,154,288
JBrowse link
G XRN1 5'-3' exoribonuclease 1 involved_in ISO (PMID:17545563) UniProt PMID:17545563 NCBI chr 3:139,337,337...139,481,479
Ensembl chr 3:146,930,988...147,073,827
JBrowse link
nuclear polyadenylation-dependent mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO (PMID:16934922) UniProt PMID:16934922 NCBI chr2A:55,792,412...55,848,242
Ensembl chr2A:56,931,365...56,986,326
JBrowse link
nuclear polyadenylation-dependent rRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC10 exosome component 10 involved_in ISO (PMID:16455498) UniProt PMID:16455498 NCBI chr 1:9,829,922...9,865,092
Ensembl chr 1:11,050,727...11,087,241
JBrowse link
G EXOSC9 exosome component 9 involved_in ISO (PMID:16455498) UniProt PMID:16455498 NCBI chr 4:114,001,770...114,017,395
Ensembl chr 4:125,138,668...125,154,288
JBrowse link
nuclear retention of unspliced pre-mRNA at the site of transcription term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXOSC10 exosome component 10 involved_in ISO (PMID:20699273) UniProt PMID:20699273 NCBI chr 1:9,829,922...9,865,092
Ensembl chr 1:11,050,727...11,087,241
JBrowse link
nuclear-transcribed mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO1 argonaute RISC component 1 involved_in ISO (PMID:18771919) UniProt PMID:18771919 NCBI chr 1:35,148,984...35,196,252
Ensembl chr 1:36,324,733...36,360,832
JBrowse link
G DDX5 DEAD-box helicase 5 involved_in ISO (PMID:23788676) UniProt PMID:23788676 NCBI chr17:58,594,956...58,603,570
Ensembl chr17:63,689,082...63,696,142
JBrowse link
G DHX34 DExH-box helicase 34 involved_in ISO (PMID:23828042) UniProt PMID:23828042 NCBI chr19:44,337,299...44,371,403
Ensembl chr19:52,996,392...53,026,046
JBrowse link
G EXOSC10 exosome component 10 involved_in ISO (PMID:17545563) UniProt PMID:17545563 NCBI chr 1:9,829,922...9,865,092
Ensembl chr 1:11,050,727...11,087,241
JBrowse link
G EXOSC9 exosome component 9 involved_in ISO (PMID:17545563) UniProt PMID:17545563 NCBI chr 4:114,001,770...114,017,395
Ensembl chr 4:125,138,668...125,154,288
JBrowse link
G NBAS NBAS subunit of NRZ tethering complex involved_in ISO (PMID:23828042) UniProt PMID:23828042 NCBI chr2A:15,159,193...15,552,121
Ensembl chr2A:15,293,512...15,685,820
JBrowse link
G NBDY negative regulator of P-body association involved_in ISO (PMID:27918561) UniProt PMID:27918561 NCBI chr  X:48,981,540...49,075,726
Ensembl chr  X:57,133,097...57,133,303
JBrowse link
G PTBP1 polypyrimidine tract binding protein 1 ISO RGD PMID:15039777 RGD:10045958 NCBI chr19:319,953...334,945 JBrowse link
G RC3H1 ring finger and CCCH-type domains 1 involved_in ISO (PMID:25026078)
(MGI:4819285|PMID:20639877)
UniProt
BHF-UCL
PMID:20639877 PMID:25026078 MGI:4819285 NCBI chr 1:149,454,748...149,539,566
Ensembl chr 1:153,160,661...153,213,402
JBrowse link
G THRAP3 thyroid hormone receptor associated protein 3 involved_in ISO (PMID:20123736) UniProt PMID:20123736 NCBI chr 1:35,492,918...35,572,896
Ensembl chr 1:36,719,770...36,741,355
JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in ISO (PMID:23828042) UniProt PMID:23828042 NCBI chr19:18,269,878...18,306,199
Ensembl chr19:19,292,725...19,313,224
JBrowse link
G XRN1 5'-3' exoribonuclease 1 involved_in ISO (PMID:17545563) UniProt PMID:17545563 NCBI chr 3:139,337,337...139,481,479
Ensembl chr 3:146,930,988...147,073,827
JBrowse link
nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT6L CCR4-NOT transcription complex subunit 6 like acts_upstream_of_or_within ISO (MGI:3828348|PMID:17452450) MGI PMID:17452450 MGI:3828348 NCBI chr 4:46,374,255...46,482,552
Ensembl chr 4:52,263,010...52,320,307
JBrowse link
G PDE12 phosphodiesterase 12 involved_in ISO (PMID:21245038) UniProt PMID:21245038 NCBI chr 3:57,489,602...57,502,240
Ensembl chr 3:58,696,083...58,699,719
JBrowse link
G RC3H1 ring finger and CCCH-type domains 1 involved_in ISO (MGI:5706859|PMID:26000482), (MGI:5751631|PMID:26255671) UniProt PMID:26000482 PMID:26255671 MGI:5706859 MGI:5751631 NCBI chr 1:149,454,748...149,539,566
Ensembl chr 1:153,160,661...153,213,402
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in
acts_upstream_of_or_within
ISO (PMID:23644599)
(MGI:3589099|PMID:15814898)
UniProt
MGI
PMID:15814898 PMID:23644599 MGI:3589099 NCBI chr19:36,505,056...36,507,693
Ensembl chr19:45,052,801...45,055,390
JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 acts_upstream_of_or_within ISO (MGI:3589099|PMID:15814898) MGI PMID:15814898 MGI:3589099 NCBI chr14:49,372,058...49,379,116
Ensembl chr14:68,247,347...68,255,805
JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 acts_upstream_of_or_within ISO (MGI:3589099|PMID:15814898) MGI PMID:15814898 MGI:3589099 NCBI chr2A:43,311,744...43,315,928 JBrowse link
nuclear-transcribed mRNA catabolic process, deadenylation-independent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZFP36 ZFP36 ring finger protein involved_in ISO (PMID:11279239) UniProt PMID:11279239 NCBI chr19:36,505,056...36,507,693
Ensembl chr19:45,052,801...45,055,390
JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in ISO PMID:11279239 UniProt PMID:11279239 RGD:11344953 NCBI chr14:49,372,058...49,379,116
Ensembl chr14:68,247,347...68,255,805
JBrowse link
nuclear-transcribed mRNA catabolic process, endonucleolytic cleavage-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UPF1 UPF1 RNA helicase and ATPase involved_in ISO (PMID:26255671) UniProt PMID:26255671 NCBI chr19:18,269,878...18,306,199
Ensembl chr19:19,292,725...19,313,224
JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in ISO (MGI:5751631|PMID:26255671) UniProt PMID:26255671 MGI:5751631 NCBI chr 1:36,743,341...36,753,261
Ensembl chr 1:38,093,917...38,103,556
JBrowse link
nuclear-transcribed mRNA catabolic process, exonucleolytic term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DIS3L2 DIS3 like 3'-5' exoribonuclease 2 involved_in ISO (PMID:23756462) UniProt PMID:23756462 NCBI chr2B:119,187,659...119,558,347
Ensembl chr2B:238,030,931...238,347,570
JBrowse link
nuclear-transcribed mRNA catabolic process, no-go decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT6 CCR4-NOT transcription complex subunit 6 involved_in ISO (PMID:15314026) UniProt PMID:15314026 NCBI chr 5:175,695,802...175,780,534
Ensembl chr 5:183,007,081...183,089,997
JBrowse link
G CSDE1 cold shock domain containing E1 involved_in ISO (PMID:15314026) UniProt PMID:15314026 NCBI chr 1:87,796,518...87,837,602
Ensembl chr 1:122,849,903...122,890,959
JBrowse link
G GTPBP2 GTP binding protein 2 acts_upstream_of_or_within ISO (MGI:5574482|PMID:25061210) MGI PMID:25061210 MGI:5574482 NCBI chr 6:43,210,517...43,219,296
Ensembl chr 6:44,500,159...44,511,300
JBrowse link
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CTIF cap binding complex dependent translation initiation factor involved_in ISO (PMID:19648179) UniProt PMID:19648179 NCBI chr18:41,923,292...42,251,321
Ensembl chr18:45,358,282...45,604,625
JBrowse link
G EIF3E eukaryotic translation initiation factor 3 subunit E involved_in ISO (PMID:17468741) UniProt PMID:17468741 NCBI chr 8:104,848,222...104,895,349 JBrowse link
G EIF4A3 eukaryotic translation initiation factor 4A3 involved_in ISO (PMID:16209946) UniProt PMID:16209946 NCBI chr17:74,221,793...74,233,738 JBrowse link
G LOC103783967 SMG1 nonsense mediated mRNA decay associated PI3K related kinase involved_in ISO (PMID:11544179) UniProt PMID:11544179 NCBI chr16:19,433,999...19,475,539 JBrowse link
G MAGOH mago homolog, exon junction complex subunit involved_in ISO (PMID:16209946)
(PMID:23917022)
UniProt
HGNC
PMID:16209946 PMID:23917022 NCBI chr 1:52,499,829...52,511,710
Ensembl chr 1:54,099,198...54,111,142
JBrowse link
G MAGOHB mago homolog B, exon junction complex subunit involved_in ISO (PMID:23917022) HGNC PMID:23917022 NCBI chr12:10,632,174...10,639,758
Ensembl chr12:10,898,716...10,905,958
JBrowse link
G NCBP1 nuclear cap binding protein subunit 1 involved_in ISO (PMID:18369367)
(PMID:11551508), (PMID:17873884)
UniProt PMID:11551508 PMID:17873884 PMID:18369367 NCBI chr 9:68,724,176...68,764,423
Ensembl chr 9:96,845,422...96,885,624
JBrowse link
G NCBP2 nuclear cap binding protein subunit 2 involved_in ISO (PMID:17873884), (PMID:18369367)
(PMID:11551508)
UniProt PMID:11551508 PMID:17873884 PMID:18369367 NCBI chr 3:194,277,280...194,284,456
Ensembl chr 3:204,214,282...204,221,294
JBrowse link
G PNRC2 proline rich nuclear receptor coactivator 2 involved_in ISO (PMID:19150429) UniProt PMID:19150429 NCBI chr 1:23,155,018...23,167,105 JBrowse link
G PYM1 PYM homolog 1, exon junction complex associated factor involved_in ISO (PMID:19410547) UniProt PMID:19410547 NCBI chr12:32,984,385...33,010,649
Ensembl chr12:33,705,815...33,736,389
JBrowse link
G RBM8A RNA binding motif protein 8A involved_in ISO (PMID:16209946) UniProt PMID:16209946 NCBI chr 1:121,830,424...121,836,378
Ensembl chr 1:113,834,110...113,839,429
JBrowse link
G RNPS1 RNA binding protein with serine rich domain 1 involved_in ISO (PMID:11546874)
(PMID:16209946)
UniProt PMID:11546874 PMID:16209946 NCBI chr16:1,110,249...1,124,975 JBrowse link
G SMG6 SMG6 nonsense mediated mRNA decay factor involved_in ISO (PMID:18974281), (PMID:19060897), (PMID:20930030) UniProt PMID:18974281 PMID:19060897 PMID:20930030 NCBI chr17:2,050,825...2,294,892
Ensembl chr17:1,937,630...2,179,535
JBrowse link
G SMG8 SMG8 nonsense mediated mRNA decay factor involved_in ISO (PMID:19417104) UniProt PMID:19417104 NCBI chr17:53,279,808...53,285,377
Ensembl chr17:58,127,969...58,133,370
JBrowse link
G SMG9 SMG9 nonsense mediated mRNA decay factor involved_in ISO (PMID:19417104) UniProt PMID:19417104 NCBI chr19:40,679,952...40,704,104
Ensembl chr19:49,285,796...49,309,980
JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in ISO (PMID:17468741)
(PMID:18369367)
UniProt PMID:17468741 PMID:18369367 NCBI chr19:18,269,878...18,306,199
Ensembl chr19:19,292,725...19,313,224
JBrowse link
G UPF2 UPF2 regulator of nonsense mediated mRNA decay involved_in ISO (PMID:18369367) UniProt PMID:18369367 NCBI chr10:11,924,483...12,047,617
Ensembl chr10:11,916,893...12,020,760
JBrowse link
G UPF3A UPF3A regulator of nonsense mediated mRNA decay NOT|involved_in ISO (PMID:16601204) UniProt PMID:16601204 NCBI chr13:95,349,449...95,373,984
Ensembl chr13:114,415,784...114,438,692
JBrowse link
G UPF3B UPF3B regulator of nonsense mediated mRNA decay involved_in ISO (PMID:16601204)
(PMID:18369367)
UniProt PMID:16601204 PMID:18369367 NCBI chr  X:108,897,140...108,916,620
Ensembl chr  X:119,292,231...119,311,632
JBrowse link
nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT6 CCR4-NOT transcription complex subunit 6 involved_in ISO (PMID:20595389) UniProt PMID:20595389 NCBI chr 5:175,695,802...175,780,534
Ensembl chr 5:183,007,081...183,089,997
JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 acts_upstream_of_or_within ISO (MGI:3807625|PMID:18625844) MGI PMID:18625844 MGI:3807625 NCBI chr 8:16,439,014...16,459,636
Ensembl chr 8:13,387,288...13,404,445
JBrowse link
G MLH1 mutL homolog 1 acts_upstream_of_or_within ISO (MGI:1934053|PMID:11337385) MGI PMID:11337385 MGI:1934053 NCBI chr 3:36,899,828...36,957,076
Ensembl chr 3:37,189,439...37,245,801
JBrowse link
G PARN poly(A)-specific ribonuclease acts_upstream_of_or_within ISO (MGI:3785219|PMID:18337750) MGI PMID:18337750 MGI:3785219 NCBI chr16:13,363,879...13,556,054
Ensembl chr16:14,787,881...14,977,786
JBrowse link
G PNLDC1 PARN like ribonuclease domain containing exonuclease 1 involved_in ISO (PMID:27515512)
(MGI:5825409|PMID:27515512)
UniProt PMID:27515512 MGI:5825409 NCBI chr 6:157,682,286...157,707,632
Ensembl chr 6:162,694,724...162,716,700
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in
acts_upstream_of_or_within
ISO (PMID:23644599)
(MGI:3589099|PMID:15814898)
BHF-UCL
MGI
PMID:15814898 PMID:23644599 MGI:3589099 NCBI chr19:36,505,056...36,507,693
Ensembl chr19:45,052,801...45,055,390
JBrowse link
nucleobase-containing small molecule catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4 involved_in ISO (PMID:10858452) UniProt PMID:10858452 NCBI chr 8:22,678,746...22,707,408
Ensembl chr 8:19,571,337...19,635,150
JBrowse link
G ENTPD7 ectonucleoside triphosphate diphosphohydrolase 7 involved_in ISO (PMID:11278936) UniProt PMID:11278936 NCBI chr10:96,276,454...96,323,287
Ensembl chr10:99,768,566...99,813,568
JBrowse link
nucleoside diphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD3 ectonucleoside triphosphate diphosphohydrolase 3 acts_upstream_of_or_within ISO (MGI:3043501|PMID:15130768) MGI PMID:15130768 MGI:3043501 NCBI chr 3:40,290,586...40,333,632
Ensembl chr 3:40,561,694...40,604,181
JBrowse link
nucleoside phosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT15 nudix hydrolase 15 involved_in ISO (PMID:26238318)
(PMID:26878724)
UniProt PMID:26238318 PMID:26878724 NCBI chr13:29,189,459...29,198,825
Ensembl chr13:47,891,557...47,900,971
JBrowse link
nucleoside triphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCTPP1 dCTP pyrophosphatase 1 involved_in ISO (PMID:24467396)
(MGI:3844778|PMID:19220460)
UniProt PMID:19220460 PMID:24467396 MGI:3844778 NCBI chr16:24,538,023...24,545,426
Ensembl chr16:30,794,268...30,802,179
JBrowse link
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO (PMID:10513816) BHF-UCL PMID:10513816 NCBI chr 6:129,591,858...129,673,000
Ensembl chr 6:133,698,640...133,783,644
JBrowse link
G ENPP3 ectonucleotide pyrophosphatase/phosphodiesterase 3 involved_in ISO (PMID:10513816) BHF-UCL PMID:10513816 NCBI chr 6:129,428,107...129,530,898
Ensembl chr 6:133,544,644...133,641,043
JBrowse link
G ENTPD3 ectonucleoside triphosphate diphosphohydrolase 3 acts_upstream_of_or_within ISO (MGI:3043501|PMID:15130768) MGI PMID:15130768 MGI:3043501 NCBI chr 3:40,290,586...40,333,632
Ensembl chr 3:40,561,694...40,604,181
JBrowse link
G SMPDL3A sphingomyelin phosphodiesterase acid like 3A involved_in ISO (PMID:26783088) UniProt PMID:26783088 NCBI chr 6:120,577,885...120,600,371
Ensembl chr 6:124,701,089...124,726,484
JBrowse link
polyuridylation-dependent mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G TUT4 terminal uridylyl transferase 4 involved_in ISO (MGI:6162305|PMID:28792939) UniProt PMID:28792939 MGI:6162305 NCBI chr 1:51,684,408...51,815,059
Ensembl chr 1:53,292,477...53,422,893
JBrowse link
G TUT7 terminal uridylyl transferase 7 involved_in ISO (MGI:6162305|PMID:28792939) UniProt PMID:28792939 MGI:6162305 NCBI chr 9:57,433,583...57,498,675
Ensembl chr 9:85,486,521...85,554,745
JBrowse link
positive regulation of 3'-UTR-mediated mRNA stabilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ELAVL4 ELAV like RNA binding protein 4 involved_in ISO (PMID:18218628) UniProt PMID:18218628 NCBI chr 1:49,288,364...49,444,457
Ensembl chr 1:50,853,276...50,951,058
JBrowse link
G LARP4B La ribonucleoprotein 4B involved_in ISO (PMID:26001795) FlyBase PMID:26001795 NCBI chr10:842,621...966,106
Ensembl chr10:894,957...971,154
JBrowse link
G RBM24 RNA binding motif protein 24 involved_in ISO (PMID:24356969) UniProt PMID:24356969 NCBI chr 6:17,140,450...17,153,035 JBrowse link
G TENT4A terminal nucleotidyltransferase 4A involved_in ISO (PMID:30026317) UniProt PMID:30026317 NCBI chr 5:7,032,809...7,077,080
Ensembl chr 5:6,724,029...6,752,159
JBrowse link
G TENT4B terminal nucleotidyltransferase 4B involved_in ISO (PMID:30026317) UniProt PMID:30026317 NCBI chr16:30,415,668...30,494,758
Ensembl chr16:49,299,498...49,373,665
JBrowse link
positive regulation of apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAX BCL2 associated X, apoptosis regulator involved_in ISO (PMID:11350920) BHF-UCL PMID:11350920 NCBI chr19:45,955,926...45,962,870
Ensembl chr19:54,793,594...54,800,468
JBrowse link
G ENDOG endonuclease G ISO RGD PMID:16407272 RGD:9685355 NCBI chr 9:99,941,856...99,945,957 JBrowse link
G HSF1 heat shock transcription factor 1 ISO RGD PMID:21192280 RGD:10403035 NCBI chr 8:141,055,310...141,078,360
Ensembl chr 8:144,062,137...144,067,866
JBrowse link
G IGFBP3 insulin like growth factor binding protein 3 ISO RGD PMID:15125883 RGD:10402776 NCBI chr 7:46,564,234...46,573,145 JBrowse link
G IL6 interleukin 6 involved_in ISO (PMID:28433754) ARUK-UCL PMID:28433754 NCBI chr 7:23,415,922...23,420,767 JBrowse link
positive regulation of deadenylation-independent decapping of nuclear-transcribed mRNA term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZFP36 ZFP36 ring finger protein involved_in ISO (PMID:16364915) UniProt PMID:16364915 NCBI chr19:36,505,056...36,507,693
Ensembl chr19:45,052,801...45,055,390
JBrowse link
positive regulation of DNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATM ATM serine/threonine kinase ISO RGD PMID:27895165 RGD:12879393 NCBI chr11:103,109,979...103,256,405
Ensembl chr11:106,584,228...106,727,041
JBrowse link
positive regulation of miRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LIN28B lin-28 homolog B involved_in ISO (PMID:18951094) CACAO PMID:18951094 NCBI chr 6:102,755,256...102,897,739
Ensembl chr 6:106,640,448...106,772,374
JBrowse link
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO (PMID:20547861) UniProt PMID:20547861 NCBI chr2A:55,792,412...55,848,242
Ensembl chr2A:56,931,365...56,986,326
JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in ISO (PMID:22055188), (PMID:24048733) UniProt PMID:22055188 PMID:24048733 NCBI chr 1:36,743,341...36,753,261
Ensembl chr 1:38,093,917...38,103,556
JBrowse link
G ZSWIM8 zinc finger SWIM-type containing 8 involved_in ISO (PMID:33184234), (PMID:33184237)
(MGI:6508520|PMID:33184237)
UniProt PMID:33184234 PMID:33184237 MGI:6508520 NCBI chr10:70,308,480...70,324,729
Ensembl chr10:72,981,196...72,997,070
JBrowse link
positive regulation of mitochondrial RNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GRSF1 G-rich RNA sequence binding factor 1 involved_in ISO (PMID:29967381) UniProt PMID:29967381 NCBI chr 4:53,384,303...53,404,706 JBrowse link
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO (PMID:19509288), (PMID:29967381) UniProt PMID:19509288 PMID:29967381 NCBI chr2A:55,792,412...55,848,242
Ensembl chr2A:56,931,365...56,986,326
JBrowse link
G SUPV3L1 Suv3 like RNA helicase involved_in ISO (PMID:19509288), (PMID:29967381)
(PMID:19864255)
UniProt PMID:19509288 PMID:19864255 PMID:29967381 NCBI chr10:65,647,273...65,676,179
Ensembl chr10:68,180,671...68,209,538
JBrowse link
positive regulation of mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CNOT1 CCR4-NOT transcription complex subunit 1 involved_in ISO (PMID:22977175) BHF-UCL PMID:22977175 NCBI chr16:38,793,212...38,902,686
Ensembl chr16:57,919,283...58,027,472
JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in ISO (PMID:23386060), (PMID:25038453) UniProt PMID:23386060 PMID:25038453 NCBI chr 8:16,439,014...16,459,636
Ensembl chr 8:13,387,288...13,404,445
JBrowse link
G CNOT8 CCR4-NOT transcription complex subunit 8 involved_in ISO (PMID:22977175) BHF-UCL PMID:22977175 NCBI chr 5:150,262,907...150,280,215
Ensembl chr 5:156,256,448...156,274,293
JBrowse link
G GTPBP1 GTP binding protein 1 involved_in ISO PMID:21515746 UniProt PMID:21515746 RGD:8553842 NCBI chr22:19,621,159...19,648,848
Ensembl chr22:37,438,626...37,462,933
JBrowse link
G HNRNPR heterogeneous nuclear ribonucleoprotein R ISO RGD PMID:15798208 RGD:9854643 NCBI chr 1:22,501,816...22,536,050
Ensembl chr 1:23,491,310...23,521,977
JBrowse link
G KHSRP KH-type splicing regulatory protein involved_in ISO (PMID:16126846) UniProt PMID:16126846 NCBI chr19:5,433,989...5,445,721 JBrowse link
G MOV10 Mov10 RISC complex RNA helicase involved_in ISO (PMID:24726324) UniProt PMID:24726324 NCBI chr 1:115,327,051...115,353,483
Ensembl chr 1:124,999,353...125,025,820
JBrowse link
G PNPT1 polyribonucleotide nucleotidyltransferase 1 involved_in ISO (PMID:16410805) RGD
UniProt
PMID:737213 PMID:16410805 RGD:11554176 NCBI chr2A:55,792,412...55,848,242
Ensembl chr2A:56,931,365...56,986,326
JBrowse link
G PRR5L proline rich 5 like involved_in ISO (PMID:21964062) UniProt PMID:21964062 NCBI chr11:36,269,291...36,438,954
Ensembl chr11:36,223,385...36,311,659
JBrowse link
G RC3H1 ring finger and CCCH-type domains 1 involved_in ISO (MGI:5706859|PMID:26000482), (MGI:5751631|PMID:26255671)
(MGI:6154479|PMID:25026077)
UniProt PMID:25026077 PMID:26000482 PMID:26255671 MGI:5706859 MGI:5751631 MGI:6154479 NCBI chr 1:149,454,748...149,539,566
Ensembl chr 1:153,160,661...153,213,402
JBrowse link
G UPF1 UPF1 RNA helicase and ATPase involved_in ISO (PMID:25225333), (PMID:26255671)
(PMID:24726324)
UniProt PMID:24726324 PMID:25225333 PMID:26255671 NCBI chr19:18,269,878...18,306,199
Ensembl chr19:19,292,725...19,313,224
JBrowse link
G ZC3H12A zinc finger CCCH-type containing 12A involved_in ISO (PMID:19909337)
(MGI:3842851|PMID:19322177), (MGI:5706859|PMID:26000482), (MGI:5706909|PMID:23185455), (MGI:5751631|PMID:26255671)
UniProt PMID:19322177 PMID:19909337 PMID:23185455 PMID:26000482 PMID:26255671 MGI:3842851 MGI:5706859 MGI:5706909 MGI:5751631 NCBI chr 1:36,743,341...36,753,261
Ensembl chr 1:38,093,917...38,103,556
JBrowse link
G ZC3HAV1 zinc finger CCCH-type containing, antiviral 1 involved_in ISO PMID:17185417
(PMID:21876179)
UniProt PMID:17185417 PMID:21876179 RGD:8553432 NCBI chr 7:131,002,580...131,068,513
Ensembl chr 7:143,489,750...143,555,438
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in ISO (MGI:5795825|PMID:15634918) UniProt PMID:15634918 MGI:5795825 NCBI chr19:36,505,056...36,507,693
Ensembl chr19:45,052,801...45,055,390
JBrowse link
positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO2 argonaute RISC catalytic component 2 involved_in ISO (MGI:5486537|PMID:19716330) UniProt PMID:19716330 MGI:5486537 NCBI chr 8:137,192,037...137,308,059
Ensembl chr 8:140,287,647...140,361,125
JBrowse link
G CNOT1 CCR4-NOT transcription complex subunit 1 involved_in ISO (PMID:21278420) UniProt PMID:21278420 NCBI chr16:38,793,212...38,902,686
Ensembl chr16:57,919,283...58,027,472
JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in ISO (PMID:21278420)
(MGI:5486537|PMID:19716330)
UniProt PMID:19716330 PMID:21278420 MGI:5486537 NCBI chr 8:16,439,014...16,459,636
Ensembl chr 8:13,387,288...13,404,445
JBrowse link
G CPEB3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO (PMID:21336257) UniProt PMID:21336257 NCBI chr10:88,794,186...89,038,808
Ensembl chr10:92,320,240...92,506,089
JBrowse link
G DHX36 DEAH-box helicase 36 involved_in ISO (PMID:14731398) UniProt PMID:14731398 NCBI chr 3:151,331,468...151,382,406
Ensembl chr 3:158,885,541...158,935,871
JBrowse link
G NANOS1 nanos C2HC-type zinc finger 1 involved_in ISO (PMID:24736845) BHF-UCL PMID:24736845 NCBI chr10:115,603,040...115,607,245 JBrowse link
G NANOS2 nanos C2HC-type zinc finger 2 involved_in ISO (PMID:24736845) BHF-UCL PMID:24736845 NCBI chr19:42,922,655...42,924,679
Ensembl chr19:51,459,529...51,459,945
JBrowse link
G NANOS3 nanos C2HC-type zinc finger 3 involved_in ISO (PMID:24736845) BHF-UCL PMID:24736845 NCBI chr19:13,427,661...13,443,218
Ensembl chr19:14,170,699...14,173,013
JBrowse link
G PABPC1 poly(A) binding protein cytoplasmic 1 involved_in ISO (MGI:5486537|PMID:19716330) UniProt PMID:19716330 MGI:5486537 NCBI chr 8:97,346,433...97,365,628
Ensembl chr 8:99,518,347...99,537,614
JBrowse link
G TNRC6B trinucleotide repeat containing adaptor 6B involved_in ISO (PMID:19716330) UniProt PMID:19716330 NCBI chr22:21,149,646...21,240,006
Ensembl chr22:38,850,107...39,045,914
JBrowse link
G TNRC6C trinucleotide repeat containing adaptor 6C involved_in ISO (PMID:21984185) UniProt PMID:21984185 NCBI chr17:72,035,737...72,185,489
Ensembl chr17:77,633,564...77,738,511
JBrowse link
G TOB1 transducer of ERBB2, 1 involved_in ISO (PMID:21336257) UniProt PMID:21336257 NCBI chr17:44,953,343...44,957,465
Ensembl chr17:49,825,646...49,826,683
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in ISO (PMID:12748283)
(MGI:5487524|PMID:21278420)
UniProt PMID:12748283 PMID:21278420 MGI:5487524 NCBI chr19:36,505,056...36,507,693
Ensembl chr19:45,052,801...45,055,390
JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in ISO PMID:12748283 UniProt PMID:12748283 RGD:11344945 NCBI chr14:49,372,058...49,379,116
Ensembl chr14:68,247,347...68,255,805
JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 involved_in ISO (MGI:5320815|PMID:22367205) UniProt PMID:22367205 MGI:5320815 NCBI chr2A:43,311,744...43,315,928 JBrowse link
positive regulation of nuclear-transcribed mRNA poly(A) tail shortening term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGO2 argonaute RISC catalytic component 2 involved_in ISO (MGI:5486537|PMID:19716330) UniProt PMID:19716330 MGI:5486537 NCBI chr 8:137,192,037...137,308,059
Ensembl chr 8:140,287,647...140,361,125
JBrowse link
G BTG2 BTG anti-proliferation factor 2 acts_upstream_of_or_within ISO (PMID:18337750) MGI PMID:18337750 NCBI chr 1:178,907,317...178,911,410
Ensembl chr 1:183,201,297...183,205,404
JBrowse link
G CNOT1 CCR4-NOT transcription complex subunit 1 involved_in ISO (PMID:21278420)
(PMID:23644599)
UniProt
BHF-UCL
PMID:21278420 PMID:23644599 NCBI chr16:38,793,212...38,902,686
Ensembl chr16:57,919,283...58,027,472
JBrowse link
G CNOT7 CCR4-NOT transcription complex subunit 7 involved_in ISO (PMID:21278420)
(MGI:5486537|PMID:19716330)
UniProt PMID:19716330 PMID:21278420 MGI:5486537 NCBI chr 8:16,439,014...16,459,636
Ensembl chr 8:13,387,288...13,404,445
JBrowse link
G CPEB3 cytoplasmic polyadenylation element binding protein 3 involved_in ISO (PMID:21336257) UniProt PMID:21336257 NCBI chr10:88,794,186...89,038,808
Ensembl chr10:92,320,240...92,506,089
JBrowse link
G EIF4ENIF1 eukaryotic translation initiation factor 4E nuclear import factor 1 involved_in ISO (PMID:32354837) UniProt PMID:32354837 NCBI chr22:12,463,859...12,515,953
Ensembl chr22:30,322,502...30,378,322
JBrowse link
G PABPC1 poly(A) binding protein cytoplasmic 1 involved_in ISO (MGI:5486537|PMID:19716330) UniProt PMID:19716330 MGI:5486537 NCBI chr 8:97,346,433...97,365,628
Ensembl chr 8:99,518,347...99,537,614
JBrowse link
G TNRC6B trinucleotide repeat containing adaptor 6B involved_in ISO (PMID:19716330) UniProt PMID:19716330 NCBI chr22:21,149,646...21,240,006
Ensembl chr22:38,850,107...39,045,914
JBrowse link
G TNRC6C trinucleotide repeat containing adaptor 6C involved_in ISO (PMID:21984185) UniProt PMID:21984185 NCBI chr17:72,035,737...72,185,489
Ensembl chr17:77,633,564...77,738,511
JBrowse link
G TOB1 transducer of ERBB2, 1 involved_in ISO (PMID:21336257) UniProt PMID:21336257 NCBI chr17:44,953,343...44,957,465
Ensembl chr17:49,825,646...49,826,683
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in ISO (PMID:10330172)
(MGI:5487524|PMID:21278420)
(MGI:5795819|PMID:20595389)
UniProt PMID:10330172 PMID:20595389 PMID:21278420 MGI:5487524 MGI:5795819 NCBI chr19:36,505,056...36,507,693
Ensembl chr19:45,052,801...45,055,390
JBrowse link
pre-mRNA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ZPR1 ZPR1 zinc finger involved_in ISO (PMID:11283611) UniProt PMID:11283611 NCBI chr11:111,613,940...111,623,539
Ensembl chr11:115,547,973...115,557,883
JBrowse link
propionyl-CoA catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT7 nudix hydrolase 7 involved_in ISO (MGI:6450264|PMID:18799520) UniProt PMID:18799520 MGI:6450264 NCBI chr16:58,312,917...58,333,256
Ensembl chr16:77,747,863...77,801,651
JBrowse link
purine deoxyribonucleoside triphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT15 nudix hydrolase 15 acts_upstream_of_or_within ISO (MGI:2663996|PMID:12767940) MGI PMID:12767940 MGI:2663996 NCBI chr13:29,189,459...29,198,825
Ensembl chr13:47,891,557...47,900,971
JBrowse link
purine nucleobase catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPYD dihydropyrimidine dehydrogenase involved_in ISO (PMID:11988088) UniProt PMID:11988088 NCBI chr 1:99,736,145...100,576,663
Ensembl chr 1:98,457,934...99,300,100
JBrowse link
purine nucleoside monophosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5C1A 5'-nucleotidase, cytosolic IA acts_upstream_of_or_within ISO (MGI:5295913|PMID:21873433) MGI PMID:21873433 MGI:5295913 NCBI chr 1:38,943,479...38,962,804
Ensembl chr 1:40,275,870...40,289,221
JBrowse link
purine nucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NUDT15 nudix hydrolase 15 involved_in ISO (PMID:26878724) UniProt PMID:26878724 NCBI chr13:29,189,459...29,198,825
Ensembl chr13:47,891,557...47,900,971
JBrowse link
purine ribonucleoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENPP4 ectonucleotide pyrophosphatase/phosphodiesterase 4 involved_in ISO (PMID:22995898) UniProt PMID:22995898 NCBI chr 6:45,710,507...45,727,215
Ensembl chr 6:46,984,395...47,001,251
JBrowse link
purine ribonucleoside diphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENTPD1 ectonucleoside triphosphate diphosphohydrolase 1 acts_upstream_of_or_within ISO (MGI:2178511|PMID:11929769) MGI PMID:11929769 MGI:2178511 NCBI chr10:92,365,267...92,511,852
Ensembl chr10:95,828,094...95,983,257
JBrowse link
G ENTPD2 ectonucleoside triphosphate diphosphohydrolase 2 acts_upstream_of_or_within ISO (MGI:2178511|PMID:11929769) MGI PMID:11929769 MGI:2178511 NCBI chr 9:108,108,780...108,114,806
Ensembl chr 9:137,077,207...137,083,031
JBrowse link
purine ribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HINT1 histidine triad nucleotide binding protein 1 involved_in ISO (PMID:16835243) UniProt PMID:16835243 NCBI chr 5:126,587,934...126,594,032
Ensembl chr 5:132,755,766...132,761,823
JBrowse link
pyrimidine deoxyribonucleotide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NT5C 5', 3'-nucleotidase, cytosolic involved_in ISO (PMID:10681516) UniProt PMID:10681516 NCBI chr17:69,077,021...69,078,998 JBrowse link
pyrimidine nucleobase catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DPYD dihydropyrimidine dehydrogenase acts_upstream_of_or_within
involved_in
ISO (MGI:2657070|PMID:12651209)
(PMID:11988088)
RGD
MGI
UniProt
PMID:1629785 PMID:11988088 PMID:12651209 MGI:2657070 RGD:1599794 NCBI chr 1:99,736,145...100,576,663
Ensembl chr 1:98,457,934...99,300,100
JBrowse link
G DPYS dihydropyrimidinase involved_in ISO (PMID:9718352) UniProt PMID:9718352 NCBI chr 8:101,008,090...101,096,234
Ensembl chr 8:103,160,922...103,248,303
JBrowse link
pyrimidine nucleoside catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G UPB1 beta-ureidopropionase 1 involved_in ISO (PMID:22525402) UniProt PMID:22525402 NCBI chr22:5,300,686...5,332,735
Ensembl chr22:22,166,370...22,197,360
JBrowse link
quinolinate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G QPRT quinolinate phosphoribosyltransferase involved_in
acts_upstream_of_or_within
ISO (PMID:24038671), (PMID:3409840), (PMID:9473669)
(PMID:9473669)
UniProt
MGI
PMID:3409840 PMID:9473669 PMID:24038671
regulation of apoptotic DNA fragmentation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AIFM1 apoptosis inducing factor mitochondria associated 1 acts_upstream_of_or_within ISO (MGI:3577148|PMID:15703386) MGI PMID:15703386 MGI:3577148 NCBI chr  X:119,256,425...119,292,612
Ensembl chr  X:129,550,287...129,586,271
JBrowse link
G APAF1 apoptotic peptidase activating factor 1 acts_upstream_of_or_within ISO (MGI:3577148|PMID:15703386) MGI PMID:15703386 MGI:3577148 NCBI chr12:96,224,515...96,311,246
Ensembl chr12:99,637,622...99,726,939
JBrowse link
G CDKN2A cyclin dependent kinase inhibitor 2A involved_in ISO (PMID:12082630) BHF-UCL PMID:12082630 NCBI chr 9:21,803,862...21,831,322 JBrowse link
G CIDEA cell death inducing DFFA like effector a involved_in ISO (MGI:1203887|PMID:9564035) BHF-UCL PMID:9564035 MGI:1203887 NCBI chr18:2,051,880...2,075,909 JBrowse link
regulation of mitochondrial mRNA stability term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G FASTKD1 FAST kinase domains 1 involved_in ISO (PMID:28335001) UniProt PMID:28335001 NCBI chr2B:56,798,465...56,843,962
Ensembl chr2B:174,267,757...174,312,363
JBrowse link
G FASTKD3 FAST kinase domains 3 involved_in ISO (PMID:27789713) UniProt PMID:27789713 NCBI chr 5:8,185,897...8,195,780
Ensembl chr 5:8,003,812...8,017,309
JBrowse link
G PDE12 phosphodiesterase 12 involved_in ISO (PMID:21666256) UniProt PMID:21666256 NCBI chr 3:57,489,602...57,502,240
Ensembl chr 3:58,696,083...58,699,719
JBrowse link
G TBRG4 transforming growth factor beta regulator 4 involved_in ISO (PMID:28335001) UniProt PMID:28335001 NCBI chr 7:45,813,586...45,825,311
Ensembl chr 7:45,879,666...45,891,351
JBrowse link
regulation of mRNA stability term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALKBH5 alkB homolog 5, RNA demethylase involved_in ISO (MGI:6111276|PMID:29279410) UniProt PMID:29279410 MGI:6111276 NCBI chr17:32,725,632...32,753,021
Ensembl chr17:38,003,362...38,030,715
JBrowse link
G APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 involved_in ISO (PMID:19401441) UniProt PMID:19401441 NCBI chr14:1,329,745...1,332,315
Ensembl chr14:19,381,911...19,384,542
JBrowse link
G BRF1 BRF1 RNA polymerase III transcription initiation factor subunit acts_upstream_of_or_within ISO (MGI:3037407|PMID:14976220) MGI PMID:14976220 MGI:3037407 NCBI chr14:85,851,908...85,950,489
Ensembl chr14:105,635,757...105,714,465
JBrowse link
G CACNG7 calcium voltage-gated channel auxiliary subunit gamma 7 ISO RGD PMID:18923037 RGD:13524564 NCBI chr19:50,849,785...50,880,904
Ensembl chr19:59,701,451...59,724,809
JBrowse link
G CALCR calcitonin receptor acts_upstream_of_or_within ISO (MGI:85609|PMID:9002981) MGI PMID:9002981 MGI:85609 NCBI chr 7:85,382,167...85,532,562
Ensembl chr 7:98,975,906...99,047,162
JBrowse link
G CARHSP1 calcium regulated heat stable protein 1 involved_in ISO (MGI:5320273|PMID:21078874) UniProt PMID:21078874 MGI:5320273 NCBI chr16:7,788,614...7,802,850
Ensembl chr16:9,024,014...9,039,900
JBrowse link
G DCP2 decapping mRNA 2 involved_in ISO (PMID:28002401) UniProt PMID:28002401 NCBI chr 5:108,333,091...108,377,119
Ensembl chr 5:114,144,999...114,172,480
JBrowse link
G DHX36 DEAH-box helicase 36 involved_in ISO (PMID:18279852) UniProt PMID:18279852 NCBI chr 3:151,331,468...151,382,406
Ensembl chr 3:158,885,541...158,935,871
JBrowse link
G ELAVL4 ELAV like RNA binding protein 4 ISO RGD PMID:22736542 RGD:9586719 NCBI chr 1:49,288,364...49,444,457
Ensembl chr 1:50,853,276...50,951,058
JBrowse link
G FMR1 FMRP translational regulator 1 involved_in ISO (MGI:3710908|PMID:17417632) UniProt PMID:17417632 MGI:3710908 NCBI chr  X:136,937,889...136,976,828
Ensembl chr  X:147,365,748...147,405,321
JBrowse link
G HNRNPD heterogeneous nuclear ribonucleoprotein D acts_upstream_of_or_within ISO (MGI:3037407|PMID:14976220) MGI PMID:14976220 MGI:3037407 NCBI chr 4:41,825,518...41,846,166
Ensembl chr 4:47,676,599...47,696,894
JBrowse link
G KHSRP KH-type splicing regulatory protein involved_in ISO (PMID:16126846) UniProt PMID:16126846 NCBI chr19:5,433,989...5,445,721 JBrowse link
G PABPC4 poly(A) binding protein cytoplasmic 4 acts_upstream_of_or_within ISO (MGI:5585232|PMID:24469397) MGI PMID:24469397 MGI:5585232 NCBI chr 1:38,846,296...38,862,371
Ensembl chr 1:40,172,657...40,188,308
JBrowse link
G PCBP4 poly(rC) binding protein 4 acts_upstream_of_or_within ISO (PMID:20817677) MGI PMID:20817677 NCBI chr 3:51,898,857...51,908,932
Ensembl chr 3:53,127,448...53,137,293
JBrowse link
G PCID2 PCI domain containing 2 involved_in ISO (PMID:20870947) UniProt PMID:20870947 NCBI chr13:94,319,699...94,350,763
Ensembl chr13:113,388,251...113,419,251
JBrowse link
G PUM1 pumilio RNA binding family member 1 involved_in ISO (PMID:26724866) UniProt PMID:26724866 NCBI chr 1:30,205,584...30,341,979
Ensembl chr 1:31,230,268...31,364,348
JBrowse link
G PUM2 pumilio RNA binding family member 2 involved_in ISO (PMID:26724866) UniProt PMID:26724866 NCBI chr2A:20,235,169...20,337,667
Ensembl chr2A:20,350,690...20,435,174
JBrowse link
G RBM24 RNA binding motif protein 24 involved_in ISO (MGI:4999688|PMID:20977548) UniProt PMID:20977548 MGI:4999688 NCBI chr 6:17,140,450...17,153,035 JBrowse link
G RC3H1 ring finger and CCCH-type domains 1 involved_in ISO (MGI:5284769|PMID:18172933) BHF-UCL PMID:18172933 MGI:5284769 NCBI chr 1:149,454,748...149,539,566
Ensembl chr 1:153,160,661...153,213,402
JBrowse link
G RNASEL ribonuclease L acts_upstream_of_or_within ISO (MGI:5543366|PMID:22441668) MGI PMID:22441668 MGI:5543366 NCBI chr 1:158,092,346...158,108,026
Ensembl chr 1:161,741,645...161,760,045
JBrowse link
G SCGB1A1 secretoglobin family 1A member 1 acts_upstream_of_or_within ISO (MGI:3615741|PMID:15356574) MGI PMID:15356574 MGI:3615741 NCBI chr11:57,774,560...57,780,334
Ensembl chr11:61,133,649...61,137,873
JBrowse link
G VIM vimentin involved_in ISO (PMID:21746880) UniProt PMID:21746880 NCBI chr10:17,546,389...17,554,702
Ensembl chr10:17,818,285...17,826,642
JBrowse link
G YTHDF1 YTH N6-methyladenosine RNA binding protein 1 involved_in ISO (PMID:32492408)
(MGI:6490006|PMID:32943573)
UniProt PMID:32492408 PMID:32943573 MGI:6490006 NCBI chr20:59,575,703...59,596,447
Ensembl chr20:61,116,645...61,135,769
JBrowse link
G YTHDF2 YTH N6-methyladenosine RNA binding protein 2 involved_in ISO (PMID:32492408)
(MGI:6490006|PMID:32943573)
(PMID:24284625), (PMID:26046440)
UniProt PMID:24284625 PMID:26046440 PMID:32492408 PMID:32943573 MGI:6490006 NCBI chr 1:28,007,592...28,041,179
Ensembl chr 1:29,038,831...29,070,533
JBrowse link
G YTHDF3 YTH N6-methyladenosine RNA binding protein 3 involved_in ISO (PMID:32194978)
(MGI:6490006|PMID:32943573)
(PMID:32492408)
UniProt PMID:32194978 PMID:32492408 PMID:32943573 MGI:6490006 NCBI chr 8:59,701,341...59,742,865
Ensembl chr 8:61,375,832...61,413,911
JBrowse link
G ZFP36 ZFP36 ring finger protein involved_in
acts_upstream_of_or_within
ISO (PMID:11719186), (PMID:15687258), (PMID:20702587), (PMID:9703499)
(MGI:5795825|PMID:15634918)
(MGI:3511379|PMID:15467755)
(MGI:5784976|PMID:22701344), (MGI:5795824|PMID:17288565)
(PMID:15187101), (PMID:15634918)
UniProt
MGI
PMID:9703499 PMID:11719186 PMID:15187101 PMID:15467755 PMID:15634918 PMID:15687258 PMID:17288565 PMID:20702587 PMID:22701344 MGI:3511379 MGI:5784976 MGI:5795824 MGI:5795825 NCBI chr19:36,505,056...36,507,693
Ensembl chr19:45,052,801...45,055,390
JBrowse link
G ZFP36L1 ZFP36 ring finger protein like 1 involved_in
acts_upstream_of_or_within
ISO PMID:12748283
(PMID:15467755)
(PMID:15538381), (PMID:15687258), (PMID:18326031), (PMID:19179481), (PMID:20702587), (PMID:24700863), (PMID:25014217), (PMID:26542173)
(MGI:4818820|PMID:20622884), (MGI:5784967|PMID:24733888), (MGI:5784976|PMID:22701344)
(MGI:5784968|PMID:24700863)
PMID:11279239
(PMID:12198173), (PMID:25106868)
UniProt
MGI
PMID:11279239 PMID:12198173 PMID:12748283 PMID:15467755 PMID:15538381 PMID:15687258 PMID:18326031 PMID:19179481 PMID:20622884 PMID:20702587 PMID:22701344 PMID:24700863 PMID:24733888 PMID:25014217 PMID:25106868 PMID:26542173 MGI:4818820 MGI:5784967 MGI:5784968 MGI:5784976 RGD:11344945 RGD:11344953 NCBI chr14:49,372,058...49,379,116
Ensembl chr14:68,247,347...68,255,805
JBrowse link
G ZFP36L2 ZFP36 ring finger protein like 2 involved_in
acts_upstream_of_or_within
ISO (PMID:25106868)
(MGI:3511379|PMID:15467755)
(MGI:4818820|PMID:20622884), (MGI:5784976|PMID:22701344)
UniProt
MGI
PMID:15467755 PMID:20622884 PMID:22701344 PMID:25106868 MGI:3511379 MGI:4818820 MGI:5784976 NCBI chr2A:43,311,744...43,315,928 JBrowse link
regulation of mRNA stability involved in cellular response to UV term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NPM1 nucleophosmin 1 involved_in ISO (PMID:12080348) UniProt PMID:12080348 NCBI chr 5:166,735,904...166,756,321
Ensembl chr 5:173,490,197...173,510,656
JBrowse link
regulation of mRNA stability involved in response to stress term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G IGF2BP1 insulin like growth factor 2 mRNA binding protein 1 involved_in ISO (PMID:17101699) UniProt PMID:17101699 NCBI chr17:8,479,806...8,538,336
Ensembl chr17:8,468,240...8,519,552
JBrowse link
regulation of RNA stability term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NLRP5 NLR family pyrin domain containing 5 acts_upstream_of_or_within ISO (MGI:1926689|PMID:11062459) MGI PMID:11062459 MGI:1926689 NCBI chr19:53,021,034...53,083,590
Ensembl chr19:61,818,345...61,879,538
JBrowse link
regulation of rRNA stability term browser
Symbol