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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular polysaccharide metabolic process
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Accession:GO:0044264 term browser browse the term
Definition:The chemical reactions and pathways involving polysaccharides, polymers of more than 10 monosaccharide residues joined by glycosidic linkages, as carried out by individual cells.
Synonyms:exact_synonym: cellular glycan metabolic process;   cellular glycan metabolism;   cellular polysaccharide metabolism


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cellular polysaccharide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXT1 exostosin glycosyltransferase 1 involved_in ISO (PMID:12907669) BHF-UCL PMID:12907669 NCBI chr 4:20,645,002...20,935,769
Ensembl chr 4:20,645,809...20,935,564
JBrowse link
G EXT2 exostosin glycosyltransferase 2 involved_in ISO (PMID:12907669) BHF-UCL PMID:12907669 NCBI chr 2:18,099,790...18,239,229
Ensembl chr 2:18,100,379...18,232,025
JBrowse link
G FUT9 fucosyltransferase 9 involved_in ISO (MGI:3041940|PMID:15121843) UniProt PMID:15121843 MGI:3041940
chondroitin sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 involved_in ISO (PMID:12163485) UniProt PMID:12163485 NCBI chr17:12,145,141...12,498,777 JBrowse link
extracellular polysaccharide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HAS1 hyaluronan synthase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:58,303,274...58,313,486
Ensembl chr 6:58,307,029...58,313,486
JBrowse link
G HAS3 hyaluronan synthase 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:17,844,974...17,870,331
Ensembl chr 6:17,843,882...17,853,011
JBrowse link
G SHAS2 hyaluronan synthase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:17,583,154...17,613,524
Ensembl chr 4:17,596,472...17,675,586
JBrowse link
glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ACADM acyl-CoA dehydrogenase medium chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:137,541,481...137,575,544
Ensembl chr 6:137,541,380...137,595,108
JBrowse link
G AGL amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase involved_in IEA UniProt GO_REF:0000043 NCBI chr 4:118,186,031...118,269,106
Ensembl chr 4:118,176,241...118,268,835
JBrowse link
G AKT1 AKT serine/threonine kinase 1 involved_in IEA UniProt GO_REF:0000043
G EPM2A EPM2A glucan phosphatase, laforin acts_upstream_of_or_within ISO (MGI:6161945|PMID:28536304) MGI PMID:28536304 MGI:6161945 NCBI chr 1:19,806,363...19,893,350
Ensembl chr 1:19,755,720...20,024,398
JBrowse link
G GBE1 1,4-alpha-glucan branching enzyme 1 involved_in IEA
ISO
IBA
(PMID:21873635) InterPro
RGD
Ensembl
GO_Central
PMID:6449198 PMID:21873635 GO_REF:0000002 GO_REF:0000107 RGD:1642743 NCBI chr13:173,634,401...173,909,646
Ensembl chr13:173,634,454...173,976,255
JBrowse link
G GCK glucokinase ISO RGD PMID:17028192 RGD:1581879 NCBI chr18:50,979,167...51,024,500
Ensembl chr18:50,790,472...51,028,917
JBrowse link
G GYG1 glycogenin 1 involved_in IBA
ISO
IEA
(PMID:21873635) GO_Central
RGD
Ensembl
PMID:8224611 PMID:10710493 PMID:21873635 GO_REF:0000107 RGD:2303736 RGD:2304070 NCBI chr13:89,221,086...89,259,569
Ensembl chr13:89,221,149...89,259,815
JBrowse link
G GYG2 glycogenin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:52,310...89,412
Ensembl chr  X:52,170...89,412
JBrowse link
G GYS1 glycogen synthase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
(MGI:3052259|PMID:15282316)
(PMID:21873635)
UniProt
MGI
RGD
GO_Central
PMID:6449198 PMID:7671134 PMID:15282316 PMID:21873635 GO_REF:0000041 MGI:3052259 RGD:1642743 RGD:2303748 NCBI chr 6:54,234,600...54,250,211
Ensembl chr 6:54,233,050...54,250,261
JBrowse link
G GYS2 glycogen synthase 2 involved_in IBA
ISO
IEA
(PMID:21873635) GO_Central
RGD
UniProt
PMID:114169 PMID:6449198 PMID:15138155 PMID:21873635 GO_REF:0000041 RGD:1582633 RGD:1642743 RGD:2304128 NCBI chr 5:51,862,952...51,915,153
Ensembl chr 5:51,862,945...51,916,107
JBrowse link
G NHLRC1 NHL repeat containing E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO (MGI:6161945|PMID:28536304) MGI PMID:28536304 MGI:6161945 NCBI chr 7:13,816,243...13,817,644
Ensembl chr 7:13,816,246...13,817,644
JBrowse link
G NR1D1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:22,263,549...22,274,131
Ensembl chr12:22,263,657...22,271,643
JBrowse link
G PER2 period circadian regulator 2 involved_in ISO (MGI:4429726|PMID:20159955) UniProt PMID:20159955 MGI:4429726 NCBI chr15:137,793,419...137,837,854
Ensembl chr15:137,793,419...137,837,236
JBrowse link
G PHKG1 phosphorylase kinase catalytic subunit gamma 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:16,822,042...16,831,054
Ensembl chr 3:16,822,043...16,834,329
JBrowse link
G PHKG2 phosphorylase kinase catalytic subunit gamma 2 involved_in IEA InterPro GO_REF:0000002 NCBI chr 3:17,640,790...17,656,765
Ensembl chr 3:17,639,996...17,656,618
JBrowse link
G PPP1R3C protein phosphatase 1 regulatory subunit 3C involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1353778|PMID:10683377) UniProt
MGI
PMID:10683377 GO_REF:0000104 MGI:1353778 NCBI chr14:103,273,401...103,278,757
Ensembl chr14:103,273,401...103,278,763
JBrowse link
G PRKAG3 protein kinase AMP-activated non-catalytic subunit gamma 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3583413|PMID:15857891) Ensembl
MGI
PMID:15857891 GO_REF:0000107 MGI:3583413 NCBI chr15:120,859,486...120,866,308
Ensembl chr15:120,855,194...120,866,332
JBrowse link
G PTGES3 prostaglandin E synthase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3714109|PMID:17438133) Ensembl
MGI
PMID:17438133 GO_REF:0000107 MGI:3714109 NCBI chr 5:22,000,335...22,022,830
Ensembl chr 5:22,000,339...22,021,663
JBrowse link
G UGP2 UDP-glucose pyrophosphorylase 2 involved_in IEA UniProt GO_REF:0000041 NCBI chr 3:77,975,450...78,032,471
Ensembl chr 3:77,975,440...78,031,731
JBrowse link
glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRB1 adrenoceptor beta 1 ISO RGD PMID:17911346 RGD:5129142 NCBI chr14:124,400,330...124,401,739
Ensembl chr14:124,400,189...124,401,739
JBrowse link
G AGL amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase involved_in IBA
ISO
IEA
(PMID:21873635) GO_Central
RGD
InterPro
PMID:6449198 PMID:9281456 PMID:11766064 PMID:15180797 PMID:21873635 GO_REF:0000002 RGD:1598779 RGD:1642741 RGD:1642743 RGD:2304191 NCBI chr 4:118,186,031...118,269,106
Ensembl chr 4:118,176,241...118,268,835
JBrowse link
G G6PC1 glucose-6-phosphatase catalytic subunit 1 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1351534|PMID:10625614) Ensembl
MGI
PMID:10625614 GO_REF:0000107 MGI:1351534 NCBI chr12:19,965,885...19,975,783
Ensembl chr12:19,962,934...19,976,050
JBrowse link
G GAA alpha glucosidase involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:2179452|PMID:10838256)
(MGI:2157196|PMID:11785984)
(MGI:2136118|PMID:11328962)
GO_Central
MGI
RGD
PMID:2193931 PMID:8710802 PMID:10838256 PMID:11328962 PMID:11785984 PMID:21873635 MGI:2136118 MGI:2157196 MGI:2179452 RGD:1599504 RGD:1599506 NCBI chr12:2,315,807...2,339,867
Ensembl chr12:2,314,591...2,336,988
JBrowse link
G PFKM phosphofructokinase, muscle involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4356361|PMID:19696889) Ensembl
MGI
PMID:19696889 GO_REF:0000107 MGI:4356361 NCBI chr 5:78,475,473...78,525,052
Ensembl chr 5:78,475,540...78,526,995
JBrowse link
G PYGB glycogen phosphorylase B involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:10634496 PMID:11071367 PMID:16226229 PMID:21873635 RGD:1642804 RGD:1642809 RGD:2304126 NCBI chr17:30,940,457...30,995,688
Ensembl chr17:30,940,452...30,995,695
JBrowse link
G PYGL glycogen phosphorylase L involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:114169 PMID:6449198 PMID:15152027 PMID:21873635 RGD:1642743 RGD:1642805 RGD:2304128 NCBI chr 1:180,645,849...180,704,124
Ensembl chr 1:180,620,314...180,719,979
JBrowse link
G PYGM glycogen phosphorylase, muscle associated involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:4844074|PMID:17689562)
(MGI:3052259|PMID:15282316), (MGI:4844074|PMID:17689562)
GO_Central
MGI
RGD
PMID:6449198 PMID:10572943 PMID:11071367 PMID:11692172 PMID:14674711 PMID:15282316 PMID:17689562 PMID:21873635 MGI:3052259 MGI:4844074 RGD:1599897 RGD:1599986 RGD:1642743 RGD:1642811 RGD:2304126 NCBI chr 2:7,409,330...7,421,256
Ensembl chr 2:7,391,064...7,421,261
JBrowse link
glycogen metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGL amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase acts_upstream_of_or_within ISO (MGI:2157196|PMID:11785984) MGI PMID:11785984 MGI:2157196 NCBI chr 4:118,186,031...118,269,106
Ensembl chr 4:118,176,241...118,268,835
JBrowse link
G AKT1 AKT serine/threonine kinase 1 acts_upstream_of_or_within ISO (MGI:2673047|PMID:12783884) MGI PMID:12783884 MGI:2673047
G EPM2A EPM2A glucan phosphatase, laforin involved_in
acts_upstream_of_or_within
ISO (PMID:25538239)
(MGI:5906209|PMID:21552327)
(MGI:3831248|PMID:18852261)
(MGI:6094295|PMID:28973665)
(MGI:5501393|PMID:23663739), (MGI:5607479|PMID:24914213), (MGI:5616018|PMID:25416783)
UniProt
MGI
PMID:18852261 PMID:21552327 PMID:23663739 PMID:24914213 PMID:25416783 PMID:25538239 PMID:28973665 MGI:3831248 MGI:5501393 MGI:5607479 MGI:5616018 MGI:5906209 MGI:6094295 NCBI chr 1:19,806,363...19,893,350
Ensembl chr 1:19,755,720...20,024,398
JBrowse link
G G6PC1 glucose-6-phosphatase catalytic subunit 1 acts_upstream_of_or_within ISO (MGI:80692|PMID:8640227) MGI PMID:8640227 MGI:80692 NCBI chr12:19,965,885...19,975,783
Ensembl chr12:19,962,934...19,976,050
JBrowse link
G GAA alpha glucosidase acts_upstream_of_or_within ISO (MGI:1195358|PMID:9384603), (MGI:1346721|PMID:10547605), (MGI:3664400|PMID:12115977), (MGI:3706473|PMID:15207257)
(MGI:1275872|PMID:9668092), (MGI:2151980|PMID:11590121), (MGI:3618942|PMID:15169761)
MGI PMID:9384603 PMID:9668092 PMID:10547605 PMID:11590121 PMID:12115977 PMID:15169761 PMID:15207257 MGI:1195358 MGI:1275872 MGI:1346721 MGI:2151980 MGI:3618942 MGI:3664400 MGI:3706473 NCBI chr12:2,315,807...2,339,867
Ensembl chr12:2,314,591...2,336,988
JBrowse link
G GNMT glycine N-methyltransferase involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3842675|PMID:17937387) Ensembl
MGI
PMID:17937387 GO_REF:0000107 MGI:3842675 NCBI chr 7:38,038,359...38,041,218
Ensembl chr 7:38,038,358...38,041,218
JBrowse link
G GSK3A glycogen synthase kinase 3 alpha involved_in IEA UniProt GO_REF:0000043 NCBI chr 6:49,690,319...49,700,735
Ensembl chr 6:49,690,370...49,700,735
JBrowse link
G GSK3B glycogen synthase kinase 3 beta involved_in IEA UniProt
Ensembl
GO_REF:0000043 GO_REF:0000107 NCBI chr13:140,136,109...140,370,197
Ensembl chr13:140,136,158...140,369,574
JBrowse link
G GYS1 glycogen synthase 1 ISO RGD PMID:6244274 PMID:10572943 RGD:1642811 RGD:2304186 NCBI chr 6:54,234,600...54,250,211
Ensembl chr 6:54,233,050...54,250,261
JBrowse link
G GYS2 glycogen synthase 2 ISO RGD PMID:1733780 PMID:6096366 RGD:2304113 RGD:2304117 NCBI chr 5:51,862,952...51,915,153
Ensembl chr 5:51,862,945...51,916,107
JBrowse link
G IL6ST interleukin 6 cytokine family signal transducer involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:1335676|PMID:10205167) Ensembl
MGI
PMID:10205167 GO_REF:0000107 MGI:1335676 NCBI chr16:35,101,304...35,151,832
Ensembl chr16:35,101,304...35,211,982
JBrowse link
G LEPR leptin receptor involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:6094295|PMID:28973665) Ensembl
MGI
PMID:28973665 GO_REF:0000107 MGI:6094295 NCBI chr 6:146,802,297...146,896,152
Ensembl chr 6:146,798,979...146,896,108
JBrowse link
G NHLRC1 NHL repeat containing E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO (MGI:5501393|PMID:23663739)
(MGI:5607479|PMID:24914213), (MGI:5616018|PMID:25416783)
MGI PMID:23663739 PMID:24914213 PMID:25416783 MGI:5501393 MGI:5607479 MGI:5616018 NCBI chr 7:13,816,243...13,817,644
Ensembl chr 7:13,816,246...13,817,644
JBrowse link
G PCDH12 protocadherin 12 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3804356|PMID:18477666) Ensembl
MGI
PMID:18477666 GO_REF:0000107 MGI:3804356 NCBI chr 2:143,550,844...143,565,028
Ensembl chr 2:143,550,847...143,565,033
JBrowse link
G PHKA1 phosphorylase kinase regulatory subunit alpha 1 involved_in IEA UniProt GO_REF:0000041 NCBI chr  X:58,456,097...58,583,216
Ensembl chr  X:58,455,938...58,583,216
JBrowse link
G PHKA2 phosphorylase kinase regulatory subunit alpha 2 involved_in IEA UniProt GO_REF:0000041 NCBI chr  X:15,279,398...15,365,731
Ensembl chr  X:15,283,102...15,365,565
JBrowse link
G PHKB phosphorylase kinase regulatory subunit beta involved_in IEA UniProt GO_REF:0000041 NCBI chr 6:36,994,424...37,193,631
Ensembl chr 6:36,991,241...37,193,587
JBrowse link
G PHKG1 phosphorylase kinase catalytic subunit gamma 1 ISO RGD PMID:3953807 PMID:6281247 RGD:2304176 RGD:2305955 NCBI chr 3:16,822,042...16,831,054
Ensembl chr 3:16,822,043...16,834,329
JBrowse link
G PHKG2 phosphorylase kinase catalytic subunit gamma 2 ISO RGD PMID:1370475 PMID:6281247 RGD:2304176 RGD:727546 NCBI chr 3:17,640,790...17,656,765
Ensembl chr 3:17,639,996...17,656,618
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha involved_in IEA UniProt GO_REF:0000043 NCBI chr 2:5,120,202...5,123,168
Ensembl chr 2:5,120,140...5,126,953
JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta involved_in IEA UniProt GO_REF:0000043 NCBI chr 3:110,437,681...110,474,896
Ensembl chr 3:110,437,687...110,474,891
JBrowse link
G PPP1CC protein phosphatase 1 catalytic subunit gamma involved_in IEA UniProt GO_REF:0000043 NCBI chr14:32,071,472...32,091,267
Ensembl chr14:32,070,544...32,091,499
JBrowse link
G PPP1R3B protein phosphatase 1 regulatory subunit 3B involved_in IEA UniProt GO_REF:0000043 NCBI chr15:56,002,383...56,013,477
Ensembl chr15:56,002,378...56,013,483
JBrowse link
G PPP1R3C protein phosphatase 1 regulatory subunit 3C acts_upstream_of_or_within ISO (MGI:5906209|PMID:21552327)
(MGI:86241|PMID:9045612)
MGI PMID:9045612 PMID:21552327 MGI:5906209 MGI:86241 NCBI chr14:103,273,401...103,278,757
Ensembl chr14:103,273,401...103,278,763
JBrowse link
G PPP1R3D protein phosphatase 1 regulatory subunit 3D involved_in IEA UniProt GO_REF:0000043 NCBI chr17:59,963,560...59,967,143
Ensembl chr17:59,964,585...59,967,113
JBrowse link
G PRKAG2 protein kinase AMP-activated non-catalytic subunit gamma 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:5,475,077...5,744,761
Ensembl chr18:5,475,077...5,744,658
JBrowse link
G PYGB glycogen phosphorylase B involved_in IEA
ISO
UniProt
RGD
PMID:1554349 GO_REF:0000043 RGD:2304136 NCBI chr17:30,940,457...30,995,688
Ensembl chr17:30,940,452...30,995,695
JBrowse link
G PYGL glycogen phosphorylase L involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:3760536|PMID:11960689) Ensembl
MGI
RGD
UniProt
PMID:1554349 PMID:1733780 PMID:2803260 PMID:6096366 PMID:8550381 PMID:11960689 PMID:16125296 GO_REF:0000043 GO_REF:0000107 MGI:3760536 RGD:1601233 RGD:2304113 RGD:2304115 RGD:2304117 RGD:2304119 RGD:2304136 NCBI chr 1:180,645,849...180,704,124
Ensembl chr 1:180,620,314...180,719,979
JBrowse link
G PYGM glycogen phosphorylase, muscle associated involved_in IEA
ISO
UniProt
RGD
PMID:6244274 PMID:8550381 PMID:10572943 GO_REF:0000043 RGD:1642811 RGD:2304119 RGD:2304186 NCBI chr 2:7,409,330...7,421,256
Ensembl chr 2:7,391,064...7,421,261
JBrowse link
G SLC37A4 solute carrier family 37 member 4 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:2677663|PMID:12925567), (MGI:3695950|PMID:16891306) Ensembl
MGI
PMID:12925567 PMID:16891306 GO_REF:0000107 MGI:2677663 MGI:3695950 NCBI chr 9:46,247,278...46,254,068
Ensembl chr 9:46,247,282...46,254,017
JBrowse link
G STK40 serine/threonine kinase 40 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5486391|PMID:23293024) Ensembl
MGI
PMID:23293024 GO_REF:0000107 MGI:5486391 NCBI chr 6:92,441,231...92,484,363
Ensembl chr 6:92,424,984...92,483,709
JBrowse link
G TCF7L2 transcription factor 7 like 2 acts_upstream_of_or_within ISO (MGI:5468191|PMID:23260145) MGI PMID:23260145 MGI:5468191 NCBI chr14:123,343,695...123,547,332
Ensembl chr14:123,343,694...123,546,417
JBrowse link
G UGP2 UDP-glucose pyrophosphorylase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:77,975,450...78,032,471
Ensembl chr 3:77,975,440...78,031,731
JBrowse link
glycophagy term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RB1CC1 RB1 inducible coiled-coil 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 4:77,593,204...77,649,551
Ensembl chr 4:77,594,338...77,649,550
JBrowse link
heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EXT1 exostosin glycosyltransferase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:20,645,002...20,935,769
Ensembl chr 4:20,645,809...20,935,564
JBrowse link
G EXT2 exostosin glycosyltransferase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:18,099,790...18,239,229
Ensembl chr 2:18,100,379...18,232,025
JBrowse link
G HS2ST1 heparan sulfate 2-O-sulfotransferase 1 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:2150438|PMID:11457822)
GO_Central
MGI
PMID:11457822 PMID:21873635 MGI:2150438 NCBI chr 4:129,101,900...129,258,372 JBrowse link
G NDST1 N-deacetylase and N-sulfotransferase 1 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:151,433,925...151,525,909
Ensembl chr 2:151,489,521...151,522,751
JBrowse link
G NDST2 N-deacetylase and N-sulfotransferase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:76,525,998...76,534,695 JBrowse link
G NDST3 N-deacetylase and N-sulfotransferase 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:105,221,344...105,370,067
Ensembl chr 8:105,221,348...105,370,019
JBrowse link
G NDST4 N-deacetylase and N-sulfotransferase 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 8:107,882,088...108,129,785
Ensembl chr 8:107,910,973...108,123,325
JBrowse link
lipopolysaccharide catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AOAH acyloxyacyl hydrolase involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:37,416,875...37,599,934
Ensembl chr18:37,416,981...37,793,057
JBrowse link
G KIAA0895 KIAA0895 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:37,714,857...37,793,059
Ensembl chr18:37,416,993...37,793,056
JBrowse link
lipopolysaccharide metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AOAH acyloxyacyl hydrolase acts_upstream_of_or_within ISO (MGI:3042753|PMID:15155618) MGI PMID:15155618 MGI:3042753 NCBI chr18:37,416,875...37,599,934
Ensembl chr18:37,416,981...37,793,057
JBrowse link
negative regulation of glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ENPP1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:31,724,290...31,796,594
Ensembl chr 1:31,722,721...31,796,595
JBrowse link
G GFPT1 glutamine--fructose-6-phosphate transaminase 1 ISO RGD PMID:8349040 RGD:1625425 NCBI chr 3:73,028,750...73,086,191
Ensembl chr 3:72,983,188...73,085,319
JBrowse link
G GRB10 growth factor receptor bound protein 10 involved_in ISO PMID:11223174 BHF-UCL PMID:11223174 RGD:8553640 NCBI chr 9:136,580,363...136,742,552
Ensembl chr 9:136,580,362...136,742,532
JBrowse link
G INPP5K inositol polyphosphate-5-phosphatase K involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr12:47,717,898...47,738,540
Ensembl chr12:47,717,907...47,738,477
JBrowse link
G INSR insulin receptor ISO RGD PMID:26300412 RGD:11529553 NCBI chr 2:71,797,209...71,939,923
Ensembl chr 2:71,797,204...71,936,139
JBrowse link
G MTERF4 mitochondrial transcription termination factor 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:139,881,217...139,887,505
Ensembl chr15:139,881,221...139,917,089
JBrowse link
G PASK PAS domain containing serine/threonine kinase involved_in IBA
IEA
(PMID:21873635) GO_Central
Ensembl
PMID:21873635 GO_REF:0000107 NCBI chr15:139,887,439...139,917,887
Ensembl chr15:139,881,221...139,917,089
JBrowse link
negative regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRA1B adrenoceptor alpha 1B acts_upstream_of_or_within ISO (MGI:3027459|PMID:14581480) MGI PMID:14581480 MGI:3027459 NCBI chr16:63,550,123...64,010,838
Ensembl chr16:63,550,128...63,603,034
JBrowse link
G INS insulin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:1,496,842...1,498,052
Ensembl chr 2:1,496,842...1,497,841
JBrowse link
poly-N-acetyllactosamine biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B3GNT2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 3:79,671,393...79,704,049
Ensembl chr 3:79,667,454...79,857,384
JBrowse link
G B3GNT3 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 2:59,934,948...59,952,861
Ensembl chr 2:59,934,958...59,952,859
JBrowse link
G B3GNT4 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr14:30,520,075...30,524,275
Ensembl chr14:30,520,076...30,523,060
JBrowse link
G B3GNT6 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 9:11,169,008...11,179,228
Ensembl chr 9:11,176,045...11,178,111
JBrowse link
G B3GNT7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr15:132,127,386...132,131,912
Ensembl chr15:132,127,396...132,131,917
JBrowse link
G B3GNT8 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:49,399,121...49,403,686
Ensembl chr 6:49,399,123...49,402,661
JBrowse link
G B3GNT9 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 6:27,791,387...27,797,458
Ensembl chr 6:27,792,133...27,795,361
JBrowse link
G B4GALT5 beta-1,4-galactosyltransferase 5 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4819078|PMID:20417617) Ensembl
MGI
PMID:20417617 GO_REF:0000107 MGI:4819078 NCBI chr17:51,257,273...51,334,566
Ensembl chr17:51,259,786...51,356,803
JBrowse link
G B4GAT1 beta-1,4-glucuronyltransferase 1 NOT|involved_in ISO (PMID:25279697), (PMID:25279699) UniProt PMID:25279697 PMID:25279699 NCBI chr 2:6,043,594...6,045,220
Ensembl chr 2:6,043,494...6,045,818
JBrowse link
positive regulation of glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKT1 AKT serine/threonine kinase 1 involved_in ISO (PMID:16814735) BHF-UCL PMID:16814735
G AKT2 AKT serine/threonine kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:48,555,785...48,620,472
Ensembl chr 6:48,555,789...48,587,919
JBrowse link
G C1QTNF2 C1q and TNF related 2 acts_upstream_of_or_within ISO (MGI:3055459|PMID:15231994) MGI PMID:15231994 MGI:3055459 NCBI chr16:63,167,087...63,185,938
Ensembl chr16:63,167,046...63,189,828
JBrowse link
G CD36 CD36 molecule ISO RGD PMID:14640889 RGD:1600636 NCBI chr 9:99,685,748...99,782,296
Ensembl chr 9:99,605,181...99,782,105
JBrowse link
G DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:32,047,614...32,064,231
Ensembl chr 5:32,047,348...32,061,704
JBrowse link
G EPM2AIP1 EPM2A interacting protein 1 involved_in
acts_upstream_of_or_within
IBA
ISO
(PMID:21873635)
(MGI:5543825|PMID:24142699)
GO_Central
MGI
PMID:21873635 PMID:24142699 MGI:5543825 NCBI chr13:21,877,863...21,886,210
Ensembl chr13:21,878,012...21,887,041
JBrowse link
G ESRRB estrogen related receptor beta involved_in ISO PMID:24481529
(MGI:5905261|PMID:24481529)
BHF-UCL PMID:24481529 MGI:5905261 RGD:12910990 NCBI chr 7:99,511,135...99,699,478
Ensembl chr 7:99,514,168...99,699,011
JBrowse link
G GCK glucokinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:50,979,167...51,024,500
Ensembl chr18:50,790,472...51,028,917
JBrowse link
G IGF1 insulin like growth factor 1 involved_in ISO (PMID:21076856) UniProt PMID:21076856 NCBI chr 5:81,762,027...81,909,253
Ensembl chr 5:81,775,970...81,848,037
JBrowse link
G IGF2 insulin like growth factor 2 involved_in ISO (MGI:4438697|PMID:20032056) BHF-UCL PMID:20032056 MGI:4438697 NCBI chr 2:1,469,183...1,496,417 JBrowse link
G INS insulin involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:1,496,842...1,498,052
Ensembl chr 2:1,496,842...1,497,841
JBrowse link
G INSR insulin receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:71,797,209...71,939,923
Ensembl chr 2:71,797,204...71,936,139
JBrowse link
G IRS1 insulin receptor substrate 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:128,245,846...128,307,321
Ensembl chr15:128,245,846...128,308,335
JBrowse link
G IRS2 insulin receptor substrate 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:76,626,158...76,654,639
Ensembl chr11:76,626,179...76,653,881
JBrowse link
G MYL7 myosin light chain 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:51,026,436...51,028,917
Ensembl chr18:50,790,472...51,028,917
JBrowse link
G PPP1R3E protein phosphatase 1 regulatory subunit 3E involved_in ISO PMID:15752363 UniProt PMID:15752363 RGD:2306166 NCBI chr 7:75,770,813...75,782,717
Ensembl chr 7:75,776,923...75,782,715
JBrowse link
G PPP1R3G protein phosphatase 1 regulatory subunit 3G involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:5000151|PMID:21471512) Ensembl
MGI
PMID:21471512 GO_REF:0000107 MGI:5000151 NCBI chr 7:3,049,153...3,059,840
Ensembl chr 7:3,051,149...3,052,210
JBrowse link
G PTH parathyroid hormone involved_in ISS UniProt GO_REF:0000024 NCBI chr 2:45,757,398...45,760,433
Ensembl chr 2:45,757,398...45,760,415
JBrowse link
G SORBS1 sorbin and SH3 domain containing 1 involved_in ISO (MGI:3690172|PMID:11001060) BHF-UCL PMID:11001060 MGI:3690172 NCBI chr14:106,895,764...107,137,469
Ensembl chr14:106,895,763...107,137,767
JBrowse link
positive regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADRA1B adrenoceptor alpha 1B acts_upstream_of_or_within ISO (MGI:3027459|PMID:14581480) MGI PMID:14581480 MGI:3027459 NCBI chr16:63,550,123...64,010,838
Ensembl chr16:63,550,128...63,603,034
JBrowse link
G HMGB1 high mobility group box 1 acts_upstream_of_or_within ISO (MGI:1339514|PMID:10391216) MGI PMID:10391216 MGI:1339514 NCBI chr11:7,195,556...7,321,071 JBrowse link
regulation of glycogen biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AKT1 AKT serine/threonine kinase 1 involved_in ISO (PMID:8940145) BHF-UCL PMID:8940145
G INPP5K inositol polyphosphate-5-phosphatase K involved_in ISO (MGI:5294535|PMID:19250614) UniProt PMID:19250614 MGI:5294535 NCBI chr12:47,717,898...47,738,540
Ensembl chr12:47,717,907...47,738,477
JBrowse link
G MTOR mechanistic target of rapamycin kinase ISO RGD PMID:17142137 RGD:1625611 NCBI chr 6:71,286,989...71,412,913
Ensembl chr 6:71,286,989...71,412,888
JBrowse link
G PPP1CA protein phosphatase 1 catalytic subunit alpha ISO RGD PMID:7720853 RGD:2304267 NCBI chr 2:5,120,202...5,123,168
Ensembl chr 2:5,120,140...5,126,953
JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta ISO RGD PMID:7720853 RGD:2304267 NCBI chr 3:110,437,681...110,474,896
Ensembl chr 3:110,437,687...110,474,891
JBrowse link
G PPP1R3A protein phosphatase 1 regulatory subunit 3A involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr18:31,997,667...32,039,949
Ensembl chr18:31,997,713...32,039,853
JBrowse link
G PPP1R3B protein phosphatase 1 regulatory subunit 3B involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:7720853 PMID:11716774 PMID:21873635 RGD:2304267 RGD:2306167 NCBI chr15:56,002,383...56,013,477
Ensembl chr15:56,002,378...56,013,483
JBrowse link
G PPP1R3C protein phosphatase 1 regulatory subunit 3C involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:11716774 PMID:21873635 RGD:2306167 NCBI chr14:103,273,401...103,278,757
Ensembl chr14:103,273,401...103,278,763
JBrowse link
G PPP1R3D protein phosphatase 1 regulatory subunit 3D involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:11716774 PMID:21873635 RGD:2306167 NCBI chr17:59,963,560...59,967,143
Ensembl chr17:59,964,585...59,967,113
JBrowse link
G PPP1R3E protein phosphatase 1 regulatory subunit 3E involved_in IBA
ISO
(PMID:21873635) GO_Central
RGD
PMID:15752363 PMID:21873635 RGD:2306166 NCBI chr 7:75,770,813...75,782,717
Ensembl chr 7:75,776,923...75,782,715
JBrowse link
G PPP1R3F protein phosphatase 1 regulatory subunit 3F involved_in
acts_upstream_of_or_within
IBA
IEA
ISO
(PMID:21873635)
(PMID:21668450)
GO_Central
Ensembl
MGI
PMID:21668450 PMID:21873635 GO_REF:0000107 NCBI chr  X:43,328,199...43,344,503
Ensembl chr  X:43,328,127...43,344,492
JBrowse link
G PPP1R3G protein phosphatase 1 regulatory subunit 3G involved_in IBA (PMID:21873635) GO_Central PMID:21873635 NCBI chr 7:3,049,153...3,059,840
Ensembl chr 7:3,051,149...3,052,210
JBrowse link
regulation of glycogen catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PPP1CA protein phosphatase 1 catalytic subunit alpha ISO RGD PMID:7720853 RGD:2304267 NCBI chr 2:5,120,202...5,123,168
Ensembl chr 2:5,120,140...5,126,953
JBrowse link
G PPP1CB protein phosphatase 1 catalytic subunit beta ISO RGD PMID:7720853 RGD:2304267 NCBI chr 3:110,437,681...110,474,896
Ensembl chr 3:110,437,687...110,474,891
JBrowse link
G PPP1R3B protein phosphatase 1 regulatory subunit 3B involved_in
acts_upstream_of_or_within
IEA
ISO
(PMID:22225877) InterPro
Ensembl
MGI
RGD
PMID:7720853 PMID:11716774 PMID:22225877 GO_REF:0000002 GO_REF:0000107 RGD:2304267 RGD:2306167 NCBI chr15:56,002,383...56,013,477
Ensembl chr15:56,002,378...56,013,483
JBrowse link
G PPP1R3C protein phosphatase 1 regulatory subunit 3C ISO RGD PMID:11716774 RGD:2306167 NCBI chr14:103,273,401...103,278,757
Ensembl chr14:103,273,401...103,278,763
JBrowse link
G PPP1R3D protein phosphatase 1 regulatory subunit 3D ISO RGD PMID:11716774 RGD:2306167 NCBI chr17:59,963,560...59,967,143
Ensembl chr17:59,964,585...59,967,113
JBrowse link
G PPP1R3E protein phosphatase 1 regulatory subunit 3E ISO RGD PMID:15752363 RGD:2306166 NCBI chr 7:75,770,813...75,782,717
Ensembl chr 7:75,776,923...75,782,715
JBrowse link
regulation of glycogen metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GCGR glucagon receptor involved_in ISO (MGI:2449992|PMID:12552113) UniProt PMID:12552113 MGI:2449992 NCBI chr12:1,149,589...1,157,234 JBrowse link
G KHK ketohexokinase acts_upstream_of_or_within ISO (MGI:5315051|PMID:22371574) MGI PMID:22371574 MGI:5315051 NCBI chr 3:112,021,163...112,031,615
Ensembl chr 3:112,017,590...112,031,558
JBrowse link
G PHLDA2 pleckstrin homology like domain family A member 2 involved_in
acts_upstream_of_or_within
IEA
ISO
(MGI:4420513|PMID:19884348) Ensembl
MGI
PMID:19884348 GO_REF:0000107 MGI:4420513 NCBI chr 2:2,057,679...2,058,675
Ensembl chr 2:2,057,679...2,058,694
JBrowse link
G POMC proopiomelanocortin acts_upstream_of_or_within ISO (MGI:5302462|PMID:21184805) MGI PMID:21184805 MGI:5302462 NCBI chr 3:113,661,712...113,668,558 JBrowse link
G RUBCNL rubicon like autophagy enhancer involved_in ISO (MGI:6282647|PMID:30704899) UniProt PMID:30704899 MGI:6282647 NCBI chr11:20,995,439...21,036,429
Ensembl chr11:20,995,898...21,036,417
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16573
    metabolic process 10410
      cellular metabolic process 9486
        cellular macromolecule metabolic process 7297
          cellular polysaccharide metabolic process 101
            4,6-pyruvylated galactose residue metabolic process 0
            6-alpha-maltosylglucose metabolic process + 0
            K antigen metabolic process + 0
            O antigen metabolic process + 0
            alginic acid metabolic process + 0
            cell wall polysaccharide metabolic process + 0
            cellular glucan metabolic process + 78
            cellular polysaccharide biosynthetic process + 70
            cellular polysaccharide catabolic process + 20
            colanic acid metabolic process + 0
            enterobacterial common antigen metabolic process + 0
            extracellular polysaccharide metabolic process + 3
            fructan metabolic process + 0
            lipopolysaccharide metabolic process + 2
            mannogen metabolic process + 0
            poly-N-acetyllactosamine metabolic process + 9
Path 2
Term Annotations click to browse term
  biological_process 16573
    metabolic process 10410
      organic substance metabolic process 9975
        macromolecule metabolic process 8635
          polysaccharide metabolic process 109
            cellular polysaccharide metabolic process 101
              4,6-pyruvylated galactose residue metabolic process 0
              6-alpha-maltosylglucose metabolic process + 0
              K antigen metabolic process + 0
              O antigen metabolic process + 0
              alginic acid metabolic process + 0
              cell wall polysaccharide metabolic process + 0
              cellular glucan metabolic process + 78
              cellular polysaccharide biosynthetic process + 70
              cellular polysaccharide catabolic process + 20
              colanic acid metabolic process + 0
              enterobacterial common antigen metabolic process + 0
              extracellular polysaccharide metabolic process + 3
              fructan metabolic process + 0
              lipopolysaccharide metabolic process + 2
              mannogen metabolic process + 0
              poly-N-acetyllactosamine metabolic process + 9
paths to the root