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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular protein catabolic process
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Accession:GO:0044257 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of a protein by individual cells.
Synonyms:exact_synonym: cellular protein breakdown;   cellular protein catabolism;   cellular protein degradation


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cellular protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chek2 checkpoint kinase 2 ISO (PMID:11298456) UniProtKB PMID:11298456 NCBI chrNW_004955455:2,969,113...3,008,004 JBrowse link
G Cln8 CLN8 transmembrane ER and ERGIC protein ISO (MGI:MGI:53233|PMID:8389815) MGI PMID:8389815 MGI:MGI:53233 NCBI chrNW_004955403:57,926,711...57,938,698 JBrowse link
G Dab2ip DAB2 interacting protein ISO (PMID:17389591) UniProtKB PMID:17389591 NCBI chrNW_004955419:6,229,437...6,416,619 JBrowse link
G Dennd3 DENN domain containing 3 ISO (MGI:MGI:5448516|PMID:21718402) UniProtKB PMID:21718402 MGI:MGI:5448516 NCBI chrNW_004955454:185,299...253,935 JBrowse link
G Htra2 HtrA serine peptidase 2 ISO (PMID:17297443) ParkinsonsUK-UCL PMID:17297443 NCBI chrNW_004955424:11,255,756...11,259,170 JBrowse link
G Ide insulin degrading enzyme ISO degradation of oxidized proteins in liver peroxisomes
(PMID:20364150)
RGD
UniProt
PMID:11235899, PMID:20364150 RGD:1627575 NCBI chrNW_004955425:819,461...926,440 JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 ISO (MGI:MGI:3612221|PMID:16368712) MGI PMID:16368712 MGI:MGI:3612221 NCBI chrNW_004955452:17,518,345...17,549,112 JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO (PMID:21376232)
(MGI:MGI:4948386|PMID:21376232)
ParkinsonsUK-UCL PMID:21376232 MGI:MGI:4948386 NCBI chrNW_004955439:18,664,230...19,953,358 JBrowse link
G Rab12 RAB12, member RAS oncogene family ISO (MGI:MGI:5448516|PMID:21718402) UniProtKB PMID:21718402 MGI:MGI:5448516 NCBI chrNW_004955402:3,102,709...3,109,701 JBrowse link
G Ripk1 receptor interacting serine/threonine kinase 1 ISO (PMID:17389591) UniProtKB PMID:17389591 NCBI chrNW_004955465:10,127,907...10,167,895 JBrowse link
G Rnf5 ring finger protein 5 ISO (PMID:19285439) UniProtKB PMID:19285439 NCBI chrNW_004955437:643,133...645,528 JBrowse link
G Siah2 siah E3 ubiquitin protein ligase 2 ISO (PMID:12952940) MGI PMID:12952940 NCBI chrNW_004955448:1,907,478...1,926,445 JBrowse link
G Ube2g1 ubiquitin conjugating enzyme E2 G1 ISO (PMID:21628527) MGI PMID:21628527 NCBI chrNW_004955467:12,552,001...12,639,620 JBrowse link
G Ube2g2 ubiquitin conjugating enzyme E2 G2 ISO (PMID:21628527) MGI PMID:21628527 NCBI chrNW_004955407:41,683,771...41,724,014 JBrowse link
G Ube4b ubiquitination factor E4B ISO (MGI:MGI:3610695|PMID:16314518) MGI PMID:16314518 MGI:MGI:3610695 NCBI chrNW_004955486:3,518,873...3,626,036 JBrowse link
acrosome matrix dispersal term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acr acrosin ISO RGD PMID:28859281 RGD:13464336 NCBI chrNW_004955413:33,721,984...33,728,088 JBrowse link
anaphase-promoting complex-dependent catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc20 cell division cycle 20 ISO (PMID:17443180)
(PMID:18753608)
UniProtKB
AgBase
PMID:17443180, PMID:18753608 NCBI chrNW_004955537:2,941,265...2,945,158 JBrowse link
G Cul3 cullin 3 ISO (PMID:10500095) MGI PMID:10500095 NCBI chrNW_004955453:9,546,554...9,629,976 JBrowse link
G Ecrg4 ECRG4 augurin precursor ISO (MGI:MGI:4454240|PMID:20404145) MGI PMID:20404145 MGI:MGI:4454240 NCBI chrNW_004955470:10,646,585...10,655,311 JBrowse link
G Fbxo31 F-box protein 31 ISO (PMID:19412162) UniProtKB PMID:19412162 NCBI chrNW_004955541:1,811,010...1,828,734 JBrowse link
G Fzr1 fizzy and cell division cycle 20 related 1 ISO (PMID:18662541), (PMID:21596315)
(PMID:18753608)
UniProtKB
AgBase
PMID:18662541, PMID:18753608, PMID:21596315 NCBI chrNW_004955495:5,481,914...5,503,690 JBrowse link
G Ube2c ubiquitin conjugating enzyme E2 C ISO (PMID:19822757), (PMID:9122200) UniProtKB PMID:9122200, PMID:19822757 NCBI chrNW_004955445:11,474,826...11,479,479 JBrowse link
G Ube2s ubiquitin conjugating enzyme E2 S ISO (PMID:19820702), (PMID:19822757) UniProtKB PMID:19820702, PMID:19822757 NCBI chrNW_004955567:854,518...859,606 JBrowse link
cytoplasm protein quality control by the ubiquitin-proteasome system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rnf126 ring finger protein 126 ISO (PMID:24981174) UniProtKB PMID:24981174 NCBI chrNW_004955495:7,083,952...7,098,442 JBrowse link
epidermal growth factor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab7a RAB7A, member RAS oncogene family ISO (PMID:16282324)
(PMID:18272684)
UniProtKB
BHF-UCL
PMID:16282324, PMID:18272684 NCBI chrNW_004955429:15,103,792...15,167,498 JBrowse link
G Snx5 sorting nexin 5 ISO RGD PMID:16487940 RGD:13508623 NCBI chrNW_004955415:26,786,836...26,805,762 JBrowse link
ER-associated misfolded protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aup1 AUP1 lipid droplet regulating VLDL assembly factor ISO (PMID:21857022) UniProt PMID:21857022 NCBI chrNW_004955424:11,259,288...11,262,413 JBrowse link
G Bag6 BAG cochaperone 6 ISO (PMID:23129660), (PMID:24981174) UniProtKB PMID:23129660, PMID:24981174 NCBI chrNW_004955437:176,848...188,243 JBrowse link
G Derl1 derlin 1 ISO (PMID:24089527) ParkinsonsUK-UCL PMID:24089527 NCBI chrNW_004955540:1,918,230...1,944,186 JBrowse link
G Rnf5 ring finger protein 5 ISO (PMID:19269966) UniProtKB PMID:19269966 NCBI chrNW_004955437:643,133...645,528 JBrowse link
G Sdf2l1 stromal cell derived factor 2 like 1 ISO PMID:23444373 MGI PMID:23444373 RGD:8554667 NCBI chrNW_004955442:17,468,302...17,470,296 JBrowse link
G Tor1a torsin family 1 member A ISO (MGI:MGI:3712415|PMID:17200151) UniProtKB PMID:17200151 MGI:MGI:3712415 NCBI chrNW_004955513:30,655...36,299 JBrowse link
G Ufd1 ubiquitin recognition factor in ER associated degradation 1 ISO (PMID:24089527) ParkinsonsUK-UCL PMID:24089527 NCBI chrNW_004955442:18,548,545...18,568,989 JBrowse link
G Vcp valosin containing protein ISO (PMID:24089527) ParkinsonsUK-UCL PMID:24089527 NCBI chrNW_004955472:1,111,649...1,124,076 JBrowse link
ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brsk2 BR serine/threonine kinase 2 ISO (PMID:23907667) ParkinsonsUK-UCL PMID:23907667 NCBI chrNW_004955476:10,911,515...10,951,544 JBrowse link
G Ccdc47 coiled-coil domain containing 47 ISO (PMID:25009997) UniProt PMID:25009997 NCBI chrNW_004955478:8,053,057...8,074,530 JBrowse link
G Derl1 derlin 1 ISO (PMID:25239945) ParkinsonsUK-UCL PMID:25239945 NCBI chrNW_004955540:1,918,230...1,944,186 JBrowse link
G Dnajb12 DnaJ heat shock protein family (Hsp40) member B12 ISO (PMID:21148293), (PMID:21150129) UniProtKB PMID:21148293, PMID:21150129 NCBI chrNW_004955437:19,266,206...19,285,654 JBrowse link
G Rcn3 reticulocalbin 3 ISO (MGI:MGI:6201885|PMID:26252542) UniProt PMID:26252542 MGI:MGI:6201885 NCBI chrNW_004955559:1,309,621...1,319,925 JBrowse link
G Rhbdd1 rhomboid domain containing 1 ISO (MGI:MGI:5437551|PMID:22795130) UniProtKB PMID:22795130 MGI:MGI:5437551 NCBI chrNW_004955453:7,527,090...7,656,689 JBrowse link
G Rnf139 ring finger protein 139 ISO (PMID:25239945) ParkinsonsUK-UCL PMID:25239945 NCBI chrNW_004955540:3,140,649...3,153,546 JBrowse link
G Rnf185 ring finger protein 185 ISO (PMID:24019521) ParkinsonsUK-UCL PMID:24019521 NCBI chrNW_004955455:5,351,530...5,394,615 JBrowse link
G Rnf5 ring finger protein 5 ISO (PMID:24019521) ParkinsonsUK-UCL PMID:24019521 NCBI chrNW_004955437:643,133...645,528 JBrowse link
G Sel1l SEL1L adaptor subunit of ERAD E3 ubiquitin ligase ISO (PMID:21454652), (PMID:26471130)
(MGI:MGI:5606246|PMID:25066055)
ParkinsonsUK-UCL
UniProtKB
PMID:21454652, PMID:25066055, PMID:26471130 MGI:MGI:5606246 NCBI chrNW_004955438:5,030,915...5,082,015 JBrowse link
G Syvn1 synoviolin 1 ISO (PMID:26471130)
(MGI:MGI:5645202|PMID:21454652)
(PMID:22590560)
UniProtKB
ParkinsonsUK-UCL
PMID:21454652, PMID:22590560, PMID:26471130 MGI:MGI:5645202 NCBI chrNW_004955422:20,067,933...20,074,947 JBrowse link
G Ubxn6 UBX domain protein 6 ISO (PMID:19275885) UniProtKB PMID:19275885 NCBI chrNW_004955495:4,456,182...4,465,954 JBrowse link
G Vcp valosin containing protein ISO (PMID:25088257)
(PMID:20104022)
ParkinsonsUK-UCL
UniProtKB
PMID:20104022, PMID:25088257 NCBI chrNW_004955472:1,111,649...1,124,076 JBrowse link
low-density lipoprotein particle receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcsk9 proprotein convertase subtilisin/kexin type 9 ISO (PMID:16912035), (PMID:18197702) HGNC PMID:16912035, PMID:18197702 NCBI chrNW_004955464:4,424,583...4,439,805 JBrowse link
lysosomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc115 coiled-coil domain containing 115 ISO (PMID:28296633) UniProtKB PMID:28296633 NCBI chrNW_004955459:25,649...30,215 JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin ISO (MGI:MGI:1346962|PMID:10527801), (MGI:MGI:3757820|PMID:17855597) UniProt PMID:10527801, PMID:17855597 MGI:MGI:1346962, MGI:MGI:3757820 NCBI chrNW_004955493:6,696,520...6,707,849 JBrowse link
G Lamp2 lysosomal associated membrane protein 2 ISO (PMID:24880125) UniProtKB PMID:24880125 NCBI chrNW_004955572:1,423,048...1,464,443 JBrowse link
G Psap prosaposin ISO (MGI:MGI:2671637|PMID:12813057) MGI PMID:12813057 MGI:MGI:2671637 NCBI chrNW_004955437:19,667,252...19,683,669 JBrowse link
G Tmem199 transmembrane protein 199 ISO (PMID:28296633) UniProtKB PMID:28296633 NCBI chrNW_004955481:4,772,394...4,776,524 JBrowse link
G Vps13a vacuolar protein sorting 13 homolog A ISO (PMID:30709847) UniProt PMID:30709847 NCBI chrNW_004955512:2,037,803...2,267,197 JBrowse link
maintenance of unfolded protein involved in ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag6 BAG cochaperone 6 ISO (PMID:21636303) ParkinsonsUK-UCL PMID:21636303 NCBI chrNW_004955437:176,848...188,243 JBrowse link
G Get4 guided entry of tail-anchored proteins factor 4 ISO (PMID:21636303) ParkinsonsUK-UCL PMID:21636303 NCBI chrNW_004955460:8,620,913...8,634,778 JBrowse link
G Usp13 ubiquitin specific peptidase 13 ISO (PMID:24424410) ParkinsonsUK-UCL PMID:24424410 NCBI chrNW_004955420:8,835,858...8,919,837 JBrowse link
mannose trimming involved in glycoprotein ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 ISO (PMID:25092655) ParkinsonsUK-UCL PMID:25092655 NCBI chrNW_004955421:8,196,631...8,225,561 JBrowse link
G Edem2 ER degradation enhancing alpha-mannosidase like protein 2 ISO (PMID:25092655) ParkinsonsUK-UCL PMID:25092655 NCBI chrNW_004955422:26,243,034...26,271,849 JBrowse link
G Edem3 ER degradation enhancing alpha-mannosidase like protein 3 ISO (MGI:MGI:3654428|PMID:16431915)
(PMID:25092655)
ParkinsonsUK-UCL PMID:16431915, PMID:25092655 MGI:MGI:3654428 NCBI chrNW_004955406:23,329,400...23,401,282 JBrowse link
G Man1b1 mannosidase alpha class 1B member 1 ISO (PMID:18003979), (PMID:21062743) ParkinsonsUK-UCL PMID:18003979, PMID:21062743 NCBI chrNW_004955513:5,109,651...5,122,568 JBrowse link
membrane protein proteolysis involved in retrograde protein transport, ER to cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hm13 histocompatibility minor 13 ISO (PMID:25239945) ParkinsonsUK-UCL PMID:25239945 NCBI chrNW_004955422:29,365,722...29,408,788 JBrowse link
G Rhbdd1 rhomboid domain containing 1 ISO (MGI:MGI:5437551|PMID:22795130) ParkinsonsUK-UCL PMID:22795130 MGI:MGI:5437551 NCBI chrNW_004955453:7,527,090...7,656,689 JBrowse link
mitochondrial protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afg1l AFG1 like ATPase ISO (PMID:26759378) UniProtKB PMID:26759378 NCBI chrNW_004955411:33,386,568...33,617,721 JBrowse link
G Bnip3 BCL2 interacting protein 3 ISO (PMID:22292033) UniProtKB PMID:22292033 NCBI chrNW_004955477:9,621,812...9,630,406 JBrowse link
G Bnip3l BCL2 interacting protein 3 like ISO (PMID:21264228) UniProtKB PMID:21264228 NCBI chrNW_004955403:49,122,408...49,144,162 JBrowse link
G Spata18 spermatogenesis associated 18 ISO (PMID:21264221), (PMID:21264228) UniProtKB PMID:21264221, PMID:21264228 NCBI chrNW_004955447:18,401,881...18,437,878 JBrowse link
G Yme1l1 YME1 like 1 ATPase ISO (PMID:27495975), (PMID:27786171) UniProtKB PMID:27495975, PMID:27786171 NCBI chrNW_004955429:2,550,611...2,572,472 JBrowse link
modification-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chfr checkpoint with forkhead and ring finger domains ISO (PMID:19182791) UniProtKB PMID:19182791 NCBI chrNW_004955482:233,485...267,064 JBrowse link
G Isg15 ISG15 ubiquitin like modifier ISO (MGI:MGI:3511369|PMID:15485925) MGI PMID:15485925 MGI:MGI:3511369 NCBI chrNW_004955486:9,706,878...9,707,876 JBrowse link
G Uba7 ubiquitin like modifier activating enzyme 7 ISO (MGI:MGI:3511369|PMID:15485925) MGI PMID:15485925 MGI:MGI:3511369 NCBI chrNW_004955532:1,697,667...1,706,668 JBrowse link
G Ube2l6 ubiquitin conjugating enzyme E2 L6 ISO (MGI:MGI:3511369|PMID:15485925) MGI PMID:15485925 MGI:MGI:3511369 NCBI chrNW_004955511:2,522,850...2,528,926 JBrowse link
negative regulation of cellular protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atraid all-trans retinoic acid induced differentiation factor ISO (PMID:21723284) UniProtKB PMID:21723284 NCBI chrNW_004955469:9,194,656...9,203,292 JBrowse link
G Cdk2 cyclin dependent kinase 2 ISO (PMID:15750306) AgBase PMID:15750306 NCBI chrNW_004955458:3,555,603...3,561,063 JBrowse link
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 ISO (PMID:16173922) UniProtKB PMID:16173922 NCBI chrNW_004955451:13,160,811...13,170,012 JBrowse link
G Dab2ip DAB2 interacting protein ISO (PMID:19903888) UniProtKB PMID:19903888 NCBI chrNW_004955419:6,229,437...6,416,619 JBrowse link
G F13b coagulation factor XIII B chain ISO (MGI:MGI:5645809|PMID:18224415) MGI PMID:18224415 MGI:MGI:5645809 NCBI chrNW_004955406:33,633,911...33,660,506 JBrowse link
G Nell1 neural EGFL like 1 ISO (PMID:21723284) UniProtKB PMID:21723284 NCBI chrNW_004955476:1,445,234...2,236,954 JBrowse link
G Rgp1 RGP1 homolog, RAB6A GEF complex partner 1 ISO (PMID:23091056) UniProtKB PMID:23091056 NCBI chrNW_004955472:550,198...554,038 JBrowse link
G Ric1 RIC1 homolog, RAB6A GEF complex partner 1 ISO (PMID:23091056) UniProtKB PMID:23091056 NCBI chrNW_004955434:9,675,654...9,770,174 JBrowse link
negative regulation of ER-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sgta small glutamine rich tetratricopeptide repeat containing alpha ISO (PMID:23129660) UniProtKB PMID:23129660 NCBI chrNW_004955495:5,025,038...5,051,810 JBrowse link
G Svip small VCP interacting protein ISO (PMID:17872946) UniProtKB PMID:17872946 NCBI chrNW_004955476:3,231,789...3,236,602 JBrowse link
G Usp14 ubiquitin specific peptidase 14 ISO (PMID:19135427) ParkinsonsUK-UCL PMID:19135427 NCBI chrNW_004955402:9,710,080...9,737,601 JBrowse link
negative regulation of ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp11 aquaporin 11 ISO (MGI:MGI:3813160|PMID:18606867) UniProt PMID:18606867 MGI:MGI:3813160 NCBI chrNW_004955414:14,245,682...14,260,717 JBrowse link
G Ubxn1 UBX domain protein 1 ISO (PMID:21135095) ParkinsonsUK-UCL PMID:21135095 NCBI chrNW_004955599:526,792...529,825 JBrowse link
G Usp25 ubiquitin specific peptidase 25 ISO (PMID:22590560) ParkinsonsUK-UCL PMID:22590560 NCBI chrNW_004955407:17,429,299...17,572,138 JBrowse link
negative regulation of low-density lipoprotein particle receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 ISO (PMID:22848640)
(MGI:MGI:5446858|PMID:22848640)
BHF-UCL PMID:22848640 MGI:MGI:5446858 NCBI chrNW_004955450:14,545,586...14,574,161 JBrowse link
G Furin furin, paired basic amino acid cleaving enzyme ISO (PMID:16912035) HGNC PMID:16912035 NCBI chrNW_004955416:14,915,031...14,947,634 JBrowse link
negative regulation of lysosomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Laptm4b lysosomal protein transmembrane 4 beta ISO (PMID:25588945) UniProtKB PMID:25588945 NCBI chrNW_004955417:13,574,493...13,625,669 JBrowse link
G Mgat3 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase ISO (MGI:MGI:5751042|PMID:25592972), (MGI:MGI:5816436|PMID:26467158) MGI PMID:25592972, PMID:26467158 MGI:MGI:5751042, MGI:MGI:5816436 NCBI chrNW_004955413:25,346,135...25,367,782 JBrowse link
G Vps35 VPS35 retromer complex component ISO (MGI:MGI:5694519|PMID:26203154) ParkinsonsUK-UCL PMID:26203154 MGI:MGI:5694519 NCBI chrNW_004955448:207,582...240,264 JBrowse link
negative regulation of proteasomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alad aminolevulinate dehydratase ISO (PMID:8175643) CAFA PMID:8175643 NCBI chrNW_004955419:14,093,010...14,104,376 JBrowse link
G Gabarapl2 GABA type A receptor associated protein like 2 ISO (PMID:21669198) BHF-UCL PMID:21669198 NCBI chrNW_004955484:1,991,020...2,004,925 JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 ISO PMID:17517623
(MGI:MGI:6148636|PMID:17517623)
ARUK-UCL PMID:17517623 MGI:MGI:6148636, RGD:13514081 NCBI chrNW_004955437:9,872,649...9,878,459 JBrowse link
G Lamp3 lysosomal associated membrane protein 3 ISO (PMID:25681212) ParkinsonsUK-UCL PMID:25681212 NCBI chrNW_004955420:24,155,793...24,185,366 JBrowse link
G LOC102030058 protein SCO1 homolog, mitochondrial ISO (MGI:MGI:5643882|PMID:25683716) MGI PMID:25683716 MGI:MGI:5643882 NCBI chrNW_004955467:6,519,873...6,535,321 JBrowse link
G Marchf7 membrane associated ring-CH-type finger 7 ISO (PMID:29295817) UniProtKB PMID:29295817 NCBI chrNW_004955449:13,834,561...13,875,864 JBrowse link
G Ophn1 oligophrenin 1 ISO (MGI:MGI:5303043|PMID:21874017) UniProtKB PMID:21874017 MGI:MGI:5303043 NCBI chrNW_004955475:7,576,629...8,019,132 JBrowse link
G Prkcg protein kinase C gamma ISO (MGI:MGI:5467682|PMID:23185022) UniProtKB PMID:23185022 MGI:MGI:5467682 NCBI chrNW_004955604:262,182...279,259 JBrowse link
G Psme3ip1 proteasome activator subunit 3 interacting protein 1 ISO (PMID:29934401) UniProt PMID:29934401 NCBI chrNW_004955433:14,813,688...14,843,446 JBrowse link
G Psmf1 proteasome inhibitor subunit 1 ISO (PMID:10764772) UniProtKB PMID:10764772 NCBI chrNW_004955596:381,080...414,307 JBrowse link
G Usp19 ubiquitin specific peptidase 19 ISO (MGI:MGI:5614537|PMID:25088257) ParkinsonsUK-UCL PMID:25088257 MGI:MGI:5614537 NCBI chrNW_004955532:1,104,212...1,115,267 JBrowse link
negative regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag5 BAG cochaperone 5 ISO (PMID:24475098) ParkinsonsUK-UCL PMID:24475098 NCBI chrNW_004955538:2,412,297...2,416,094 JBrowse link
G Bag6 BAG cochaperone 6 ISO (MGI:MGI:3808636|PMID:18678708) UniProtKB PMID:18678708 MGI:MGI:3808636 NCBI chrNW_004955437:176,848...188,243 JBrowse link
G Camlg calcium modulating ligand ISO (PMID:20553626) UniProt PMID:20553626 NCBI chrNW_004955408:29,968,962...29,977,896 JBrowse link
G Ccar2 cell cycle and apoptosis regulator 2 ISO (PMID:23398316) UniProtKB PMID:23398316 NCBI chrNW_004955403:46,027,997...46,042,154 JBrowse link
G Clec16a C-type lectin domain containing 16A ISO (MGI:MGI:5603233|PMID:24949970) MGI PMID:24949970 MGI:MGI:5603233 NCBI chrNW_004955442:7,369,616...7,584,052 JBrowse link
G Ddrgk1 DDRGK domain containing 1 ISO (PMID:28263186) UniProtKB PMID:28263186 NCBI chrNW_004955415:14,085,404...14,098,220 JBrowse link
G Fhit fragile histidine triad diadenosine triphosphatase ISO (PMID:15313915) UniProtKB PMID:15313915 NCBI chrNW_004955430:221,518...508,094 JBrowse link
G Gipc1 GIPC PDZ domain containing family member 1 ISO (MGI:MGI:3807767|PMID:11546783) BHF-UCL PMID:11546783 MGI:MGI:3807767 NCBI chrNW_004955415:33,067,689...33,077,749 JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 ISO (PMID:16280321)
(PMID:24613385)
MGI
UniProtKB
PMID:16280321, PMID:24613385 NCBI chrNW_004955437:9,872,649...9,878,459 JBrowse link
G Klhl40 kelch like family member 40 ISO (MGI:MGI:5586592|PMID:24960163) MGI PMID:24960163 MGI:MGI:5586592 NCBI chrNW_004955420:28,117,553...28,122,391 JBrowse link
G Map1a microtubule associated protein 1A ISO (MGI:MGI:5703671|PMID:26609151) ARUK-UCL PMID:26609151 MGI:MGI:5703671 NCBI chrNW_004955416:10,052,964...10,073,318 JBrowse link
G Mtm1 myotubularin 1 ISO (MGI:MGI:5510937|PMID:23695157) MGI PMID:23695157 MGI:MGI:5510937 NCBI chrNW_004955498:6,329,402...6,444,708 JBrowse link
G N4bp1 NEDD4 binding protein 1 ISO (MGI:MGI:3829128|PMID:17592138) UniProtKB PMID:17592138 MGI:MGI:3829128 NCBI chrNW_004955474:6,796,068...6,814,906 JBrowse link
G Nop53 NOP53 ribosome biogenesis factor ISO (PMID:22522597) UniProtKB PMID:22522597 NCBI chrNW_004955574:1,505,997...1,514,680 JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase ISO (PMID:26678539) UniProtKB PMID:26678539 NCBI chrNW_004955475:11,062,258...11,112,252 JBrowse link
G Park7 Parkinsonism associated deglycase ISO (PMID:17015834) ParkinsonsUK-UCL PMID:17015834 NCBI chrNW_004955486:4,974,130...4,985,927 JBrowse link
G Pbk PDZ binding kinase ISO (MGI:MGI:5293269|PMID:21715333) MGI PMID:21715333 MGI:MGI:5293269 NCBI chrNW_004955403:50,332,167...50,353,147 JBrowse link
G Rpl11 ribosomal protein L11 ISO (MGI:MGI:5897550|PMID:21804542) UniProtKB PMID:21804542 MGI:MGI:5897550 NCBI chrNW_004955452:3,626,609...3,630,911 JBrowse link
G Rybp RING1 and YY1 binding protein ISO (PMID:27060496) UniProtKB PMID:27060496 NCBI chrNW_004955421:15,728,778...15,803,150 JBrowse link
G Sdcbp syndecan binding protein ISO (PMID:25893292) UniProtKB PMID:25893292 NCBI chrNW_004955454:17,093,930...17,113,491 JBrowse link
G Senp1 SUMO specific peptidase 1 ISO (MGI:MGI:3818351|PMID:17981124) MGI PMID:17981124 MGI:MGI:3818351 NCBI chrNW_004955500:6,924,445...6,978,482 JBrowse link
G Shh sonic hedgehog signaling molecule ISO (MGI:MGI:3624046|PMID:16611981) MGI PMID:16611981 MGI:MGI:3624046 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 ISO (MGI:MGI:5310666|PMID:22285184) MGI PMID:22285184 MGI:MGI:5310666 NCBI chrNW_004955420:24,594,057...24,729,108 JBrowse link
G Taf9 TATA-box binding protein associated factor 9 ISO (PMID:11278372) BHF-UCL PMID:11278372 NCBI chrNW_004955575:74,506...76,272 JBrowse link
G Tlk2 tousled like kinase 2 ISO (PMID:20016786) UniProtKB PMID:20016786 NCBI chrNW_004955478:9,100,863...9,229,448 JBrowse link
G Ubxn1 UBX domain protein 1 ISO (PMID:20351172) UniProtKB PMID:20351172 NCBI chrNW_004955599:526,792...529,825 JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 ISO (PMID:23770237) UniProtKB PMID:23770237 NCBI chrNW_004955406:30,432,652...30,468,741 JBrowse link
G Usp7 ubiquitin specific peptidase 7 ISO (PMID:26678539) UniProtKB PMID:26678539 NCBI chrNW_004955442:9,316,022...9,355,751 JBrowse link
G Wac WW domain containing adaptor with coiled-coil ISO (PMID:22354037) BHF-UCL PMID:22354037 NCBI chrNW_004955462:2,358,842...2,435,644 JBrowse link
negative regulation of proteolysis involved in cellular protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Efna1 ephrin A1 ISO (PMID:24217950) ARUK-UCL PMID:24217950 NCBI chrNW_004955545:1,610,929...1,617,217 JBrowse link
G Epha4 EPH receptor A4 ISO (PMID:24217950) ARUK-UCL PMID:24217950 NCBI chrNW_004955453:12,099,800...12,240,199 JBrowse link
negative regulation of retrograde protein transport, ER to cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Derl2 derlin 2 ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955467:10,824,922...10,837,408 JBrowse link
G Derl3 derlin 3 ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955455:8,415,868...8,418,753 JBrowse link
G Erlec1 endoplasmic reticulum lectin 1 ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955441:19,535,425...19,557,960 JBrowse link
G Os9 OS9 endoplasmic reticulum lectin ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955458:5,407,709...5,432,646 JBrowse link
G Svip small VCP interacting protein ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955476:3,231,789...3,236,602 JBrowse link
G Ubac2 UBA domain containing 2 ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955404:11,205,972...11,357,370 JBrowse link
G Ube2g2 ubiquitin conjugating enzyme E2 G2 ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955407:41,683,771...41,724,014 JBrowse link
G Ube2j1 ubiquitin conjugating enzyme E2 J1 ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955411:16,076,647...16,091,554 JBrowse link
negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Styx serine/threonine/tyrosine interacting protein ISO (PMID:28007894) UniProtKB PMID:28007894 NCBI chrNW_004955409:10,428,556...10,445,384 JBrowse link
negative regulation of ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anks1a ankyrin repeat and sterile alpha motif domain containing 1A ISO (MGI:MGI:4461099|PMID:20100865) MGI PMID:20100865 MGI:MGI:4461099 NCBI chrNW_004955437:2,916,598...3,070,771 JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 ISO (PMID:28031292) ARUK-UCL PMID:28031292 NCBI chrNW_004955597:326,601...397,112 JBrowse link
G Csnk2a2 casein kinase 2 alpha 2 ISO (PMID:28031292) ARUK-UCL PMID:28031292 NCBI chrNW_004955433:15,677,788...15,718,894 JBrowse link
G Hfe homeostatic iron regulator ISO (PMID:24904118) BHF-UCL PMID:24904118 NCBI chrNW_004955483:933,269...941,070 JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 ISO (PMID:21628596) FlyBase PMID:21628596 NCBI chrNW_004955494:3,365,826...3,554,735 JBrowse link
G Pdcl3 phosducin like 3 ISO (PMID:23792958) MGI PMID:23792958 NCBI chrNW_004955470:6,553,450...6,563,814 JBrowse link
G Pml PML nuclear body scaffold ISO (PMID:15195100) UniProtKB PMID:15195100 NCBI chrNW_004955450:3,654,854...3,692,057 JBrowse link
G Psen1 presenilin 1 ISO (MGI:MGI:4887523|PMID:20208556) BHF-UCL PMID:20208556 MGI:MGI:4887523 NCBI chrNW_004955523:2,128,529...2,210,737 JBrowse link
G Psen2 presenilin 2 ISO (MGI:MGI:4887523|PMID:20208556) BHF-UCL PMID:20208556 MGI:MGI:4887523 NCBI chrNW_004955406:5,727,367...5,748,798 JBrowse link
G Qrich2 glutamine rich 2 ISO (MGI:MGI:6277293|PMID:30683861)
(PMID:30683861)
UniProt PMID:30683861 MGI:MGI:6277293 NCBI chrNW_004955506:5,990,070...6,015,808 JBrowse link
G Rpl11 ribosomal protein L11 ISO (PMID:18560357) CAFA PMID:18560357 NCBI chrNW_004955452:3,626,609...3,630,911 JBrowse link
G Rpl23 ribosomal protein L23 ISO (PMID:15314173) CAFA PMID:15314173 NCBI chrNW_004955451:13,892,880...13,898,079 JBrowse link
G Rpl5 ribosomal protein L5 ISO (PMID:18560357) CAFA PMID:18560357 NCBI chrNW_004955423:1,748,809...1,758,622 JBrowse link
G Rps7 ribosomal protein S7 ISO (PMID:17310983) CAFA PMID:17310983 NCBI chrNW_004955487:3,793,168...3,798,007 JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat containing alpha ISO (PMID:23129660) UniProtKB PMID:23129660 NCBI chrNW_004955495:5,025,038...5,051,810 JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling ISO (MGI:MGI:4355593|PMID:19684112) MGI PMID:19684112 MGI:MGI:4355593 NCBI chrNW_004955485:7,805,244...7,925,414 JBrowse link
G Taf1 TATA-box binding protein associated factor 1 ISO (PMID:17237821) ParkinsonsUK-UCL PMID:17237821 NCBI chrNW_004955475:10,930,175...11,006,876 JBrowse link
G Wnt1 Wnt family member 1 ISO (MGI:MGI:3628833|PMID:16601693) MGI PMID:16601693 MGI:MGI:3628833 NCBI chrNW_004955500:7,797,063...7,811,142 JBrowse link
nuclear protein quality control by the ubiquitin-proteasome system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cul3 cullin 3 ISO (PMID:27561354) UniProtKB PMID:27561354 NCBI chrNW_004955453:9,546,554...9,629,976 JBrowse link
G Klhl15 kelch like family member 15 ISO (PMID:27561354) UniProtKB PMID:27561354 NCBI chrNW_004955509:4,377,975...4,439,287 JBrowse link
oxidation-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lonp1 lon peptidase 1, mitochondrial ISO (PMID:12198491) UniProtKB PMID:12198491 NCBI chrNW_004955495:3,712,173...3,729,556 JBrowse link
positive regulation of cellular protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amer1 APC membrane recruitment protein 1 ISO (PMID:17510365) ParkinsonsUK-UCL PMID:17510365 NCBI chrNW_004955475:4,451,094...4,470,750 JBrowse link
G Dact1 dishevelled binding antagonist of beta catenin 1 ISO (PMID:18936100)
(PMID:16446366)
ParkinsonsUK-UCL PMID:16446366, PMID:18936100 NCBI chrNW_004955466:12,367,760...12,374,141 JBrowse link
G Ezr ezrin ISO (PMID:21148287) UniProtKB PMID:21148287 NCBI chrNW_004955439:3,701,722...3,740,345 JBrowse link
G Faf1 Fas associated factor 1 ISO (PMID:26842564) UniProtKB PMID:26842564 NCBI chrNW_004955464:8,037,344...8,477,798 JBrowse link
G Fbxl5 F-box and leucine rich repeat protein 5 ISO (MGI:MGI:5292406|PMID:21907140) MGI PMID:21907140 MGI:MGI:5292406 NCBI chrNW_004955480:8,360,957...8,397,903 JBrowse link
G Hamp hepcidin antimicrobial peptide ISO (MGI:MGI:5293184|PMID:21700773) MGI PMID:21700773 MGI:MGI:5293184 NCBI chrNW_004955468:4,576,080...4,577,591 JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 ISO (PMID:18292230) ARUK-UCL PMID:18292230 NCBI chrNW_004955538:1,469,544...1,475,010 JBrowse link
G LOC102009757 ubiquinol-cytochrome-c reductase complex assembly factor 2 ISO (PMID:24385928) UniProtKB PMID:24385928 NCBI chrNW_004955437:2,107,475...2,119,892 JBrowse link
G Msn moesin ISO (PMID:21148287) UniProtKB PMID:21148287 NCBI chrNW_004955475:5,301,856...5,370,378 JBrowse link
G Pttg1ip PTTG1 interacting protein ISO (PMID:24506068) MGI PMID:24506068 NCBI chrNW_004955407:41,753,855...41,769,107 JBrowse link
G Rdx radixin ISO (PMID:21148287) UniProtKB PMID:21148287 NCBI chrNW_004955412:12,100,436...12,184,444 JBrowse link
G Tnfaip3 TNF alpha induced protein 3 ISO (MGI:MGI:3839729|PMID:18952128) MGI PMID:18952128 MGI:MGI:3839729 NCBI chrNW_004955436:21,566,591...21,581,551 JBrowse link
G Vgll4 vestigial like family member 4 ISO (MGI:MGI:6120600|PMID:27720608) UniProt PMID:27720608 MGI:MGI:6120600 NCBI chrNW_004955429:14,301,509...14,413,163 JBrowse link
G Vps11 VPS11 core subunit of CORVET and HOPS complexes ISO (PMID:21148287) UniProtKB PMID:21148287 NCBI chrNW_004955412:20,161,520...20,190,141 JBrowse link
G Vps35 VPS35 retromer complex component ISO (PMID:25533483) ParkinsonsUK-UCL PMID:25533483 NCBI chrNW_004955448:207,582...240,264 JBrowse link
positive regulation of ER-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcap31 B cell receptor associated protein 31 ISO (PMID:18555783) ParkinsonsUK-UCL PMID:18555783 NCBI chrNW_004955580:429,223...459,168 JBrowse link
G Cav1 caveolin 1 ISO (PMID:24089527) ParkinsonsUK-UCL PMID:24089527 NCBI chrNW_004955432:22,258,262...22,292,403 JBrowse link
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 ISO (PMID:18307982)
(PMID:22045699)
UniProtKB
ParkinsonsUK-UCL
PMID:18307982, PMID:22045699 NCBI chrNW_004955433:14,609,275...14,621,774 JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat containing alpha ISO (PMID:23246001) ParkinsonsUK-UCL PMID:23246001 NCBI chrNW_004955495:5,025,038...5,051,810 JBrowse link
G Ubqln1 ubiquilin 1 ISO (PMID:18307982) UniProtKB PMID:18307982 NCBI chrNW_004955432:3,575,034...3,617,029 JBrowse link
G Ubqln2 ubiquilin 2 ISO (PMID:18307982) UniProtKB PMID:18307982 NCBI chrNW_004955475:3,260,209...3,263,586 JBrowse link
positive regulation of ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atxn3 ataxin 3 ISO (PMID:17000876) ParkinsonsUK-UCL PMID:17000876 NCBI chrNW_004955438:14,405,415...14,443,457 JBrowse link
G Bag6 BAG cochaperone 6 ISO (PMID:24424410) ParkinsonsUK-UCL PMID:24424410 NCBI chrNW_004955437:176,848...188,243 JBrowse link
G Rnf185 ring finger protein 185 ISO (PMID:27485036) UniProt PMID:27485036 NCBI chrNW_004955455:5,351,530...5,394,615 JBrowse link
G Rnft1 ring finger protein, transmembrane 1 ISO (PMID:27485036) UniProt PMID:27485036 NCBI chrNW_004955451:3,165,316...3,178,991 JBrowse link
G Tmem259 transmembrane protein 259 ISO (MGI:MGI:5648655|PMID:25977983) UniProtKB PMID:25977983 MGI:MGI:5648655 NCBI chrNW_004955495:6,856,609...6,859,948 JBrowse link
G Tmem67 transmembrane protein 67 ISO RGD PMID:19815549 RGD:8554391 NCBI chrNW_004955417:10,097,488...10,137,959 JBrowse link
G Usp13 ubiquitin specific peptidase 13 ISO (PMID:24424410) ParkinsonsUK-UCL PMID:24424410 NCBI chrNW_004955420:8,835,858...8,919,837 JBrowse link
positive regulation of low-density lipoprotein particle receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 ISO (PMID:21810484) ARUK-UCL PMID:21810484 NCBI chrNW_004955513:5,035,879...5,051,140 JBrowse link
G Apoe apolipoprotein E ISO (PMID:15950758) BHF-UCL PMID:15950758 NCBI chrNW_004955555:1,998,170...2,002,003 JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 ISO (PMID:22848640) BHF-UCL PMID:22848640 NCBI chrNW_004955464:4,424,583...4,439,805 JBrowse link
positive regulation of lysosomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ldlr low density lipoprotein receptor ISO (MGI:MGI:5902678|PMID:22383525) ARUK-UCL PMID:22383525 MGI:MGI:5902678 NCBI chrNW_004955495:2,114,702...2,135,584 JBrowse link
G Lrp1 LDL receptor related protein 1 ISO (PMID:23152628) ARUK-UCL PMID:23152628 NCBI chrNW_004955458:4,861,431...4,941,939 JBrowse link
G Lrp2 LDL receptor related protein 2 ISO (PMID:9228033) ARUK-UCL PMID:9228033 NCBI chrNW_004955449:5,155,109...5,314,886 JBrowse link
positive regulation of proteasomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag2 BAG cochaperone 2 ISO (MGI:MGI:6148635|PMID:19228967) ARUK-UCL PMID:19228967 MGI:MGI:6148635 NCBI chrNW_004955502:2,984,233...2,994,457 JBrowse link
G Dab2ip DAB2 interacting protein ISO (PMID:20080667) UniProtKB PMID:20080667 NCBI chrNW_004955419:6,229,437...6,416,619 JBrowse link
G Ddrgk1 DDRGK domain containing 1 ISO (PMID:23675531) UniProtKB PMID:23675531 NCBI chrNW_004955415:14,085,404...14,098,220 JBrowse link
G Ecscr endothelial cell surface expressed chemotaxis and apoptosis regulator ISO (PMID:19416853) MGI PMID:19416853 NCBI chrNW_004955418:1,108,805...1,116,338 JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 ISO (PMID:23858059)
(MGI:MGI:5543313|PMID:23858059)
ParkinsonsUK-UCL PMID:23858059 MGI:MGI:5543313 NCBI chrNW_004955471:6,852,459...7,026,590 JBrowse link
G Fmr1 FMRP translational regulator 1 ISO (MGI:MGI:5770038|PMID:24709664) UniProtKB PMID:24709664 MGI:MGI:5770038 NCBI chrNW_004955498:566,741...594,837 JBrowse link
G Kcne2 potassium voltage-gated channel subfamily E regulatory subunit 2 ISO (PMID:22180649) BHF-UCL PMID:22180649 NCBI chrNW_004955407:33,734,969...33,736,609 JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator ISO (PMID:16300740) UniProt PMID:16300740 NCBI chrNW_004955493:6,746,380...6,747,763 JBrowse link
G Osbpl7 oxysterol binding protein like 7 ISO (PMID:21669198) BHF-UCL PMID:21669198 NCBI chrNW_004955451:13,289,938...13,301,243 JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO (PMID:23858059) ParkinsonsUK-UCL PMID:23858059 NCBI chrNW_004955439:18,664,230...19,953,358 JBrowse link
G Rnf40 ring finger protein 40 ISO RGD PMID:12121982 RGD:633892 NCBI chrNW_004955493:7,627,189...7,640,711 JBrowse link
G Tmtc3 transmembrane O-mannosyltransferase targeting cadherins 3 ISO (PMID:21603654) UniProtKB PMID:21603654 NCBI chrNW_004955405:25,607,134...25,646,050 JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 ISO (MGI:MGI:6150565|PMID:29518356) ARUK-UCL PMID:29518356 MGI:MGI:6150565 NCBI chrNW_004955437:7,780,886...7,785,597 JBrowse link
G Xbp1 X-box binding protein 1 ISO (MGI:MGI:4946566|PMID:21317886) MGI PMID:21317886 MGI:MGI:4946566 NCBI chrNW_004955455:3,037,885...3,041,827 JBrowse link
positive regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 ISO (MGI:MGI:3589701|PMID:15937334) MGI PMID:15937334 MGI:MGI:3589701 NCBI chrNW_004955538:3,208,711...3,224,386 JBrowse link
G Atg7 autophagy related 7 ISO (MGI:MGI:5465208|PMID:23152632) MGI PMID:23152632 MGI:MGI:5465208 NCBI chrNW_004955429:14,076,976...14,301,034 JBrowse link
G Aurka aurora kinase A ISO (MGI:MGI:3697244|PMID:17060449) MGI PMID:17060449 MGI:MGI:3697244 NCBI chrNW_004955445:2,831,073...2,853,151 JBrowse link
G Axin1 axin 1 ISO (MGI:MGI:3628833|PMID:16601693) MGI PMID:16601693 MGI:MGI:3628833 NCBI chrNW_004955442:16,845,728...16,898,301 JBrowse link
G Bag2 BAG cochaperone 2 NOT ISO (MGI:MGI:6148635|PMID:19228967) ARUK-UCL PMID:19228967 MGI:MGI:6148635 NCBI chrNW_004955502:2,984,233...2,994,457 JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 ISO (PMID:22302990) MGI PMID:22302990 NCBI chrNW_004955428:18,682,072...18,724,560 JBrowse link
G Cbfa2t3 CBFA2/RUNX1 partner transcriptional co-repressor 3 ISO (PMID:25974097) UniProtKB PMID:25974097 NCBI chrNW_004955541:2,724,369...2,777,540 JBrowse link
G Chfr checkpoint with forkhead and ring finger domains ISO (MGI:MGI:5310666|PMID:22285184) MGI PMID:22285184 MGI:MGI:5310666 NCBI chrNW_004955482:233,485...267,064 JBrowse link
G Clu clusterin ISO (PMID:20068069) UniProtKB PMID:20068069 NCBI chrNW_004955403:50,160,598...50,175,876 JBrowse link
G Cop1 COP1 E3 ubiquitin ligase ISO (PMID:19805145) UniProtKB PMID:19805145 NCBI chrNW_004955406:15,662,546...15,859,306 JBrowse link
G Csnk1a1 casein kinase 1 alpha 1 ISO (PMID:19364825)
(PMID:11955436)
FlyBase
ParkinsonsUK-UCL
PMID:11955436, PMID:19364825 NCBI chrNW_004955415:4,921,356...4,966,705 JBrowse link
G Csnk1d casein kinase 1 delta ISO (MGI:MGI:3849793|PMID:19414593) UniProtKB PMID:19414593 MGI:MGI:3849793 NCBI chrNW_004955506:904,659...936,293 JBrowse link
G Csnk1e casein kinase 1 epsilon ISO (MGI:MGI:3849793|PMID:19414593) UniProtKB PMID:19414593 MGI:MGI:3849793 NCBI chrNW_004955413:24,560,889...24,591,669 JBrowse link
G Ddrgk1 DDRGK domain containing 1 ISO (PMID:23675531) ParkinsonsUK-UCL PMID:23675531 NCBI chrNW_004955415:14,085,404...14,098,220 JBrowse link
G Det1 DET1 partner of COP1 E3 ubiquitin ligase ISO (PMID:14739464) UniProtKB PMID:14739464 NCBI chrNW_004955416:16,393,199...16,408,144 JBrowse link
G Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 ISO (PMID:15936278) BHF-UCL PMID:15936278 NCBI chrNW_004955453:14,147,286...14,154,396 JBrowse link
G Dvl1 dishevelled segment polarity protein 1 ISO (PMID:20177058) BHF-UCL PMID:20177058 NCBI chrNW_004955486:9,464,390...9,469,984 JBrowse link
G Fam122a family with sequence similarity 122A ISO (PMID:27588481) UniProtKB PMID:27588481 NCBI chrNW_004955434:4,250,105...4,251,508 JBrowse link
G Fbxo22 F-box protein 22 ISO (MGI:MGI:3840749|PMID:19319192) MGI PMID:19319192 MGI:MGI:3840749 NCBI chrNW_004955450:1,152,383...1,171,257 JBrowse link
G Gba glucosylceramidase beta ISO (MGI:MGI:5501380|PMID:23707074) ParkinsonsUK-UCL PMID:23707074 MGI:MGI:5501380 NCBI chrNW_004955545:1,682,097...1,689,373 JBrowse link
G Gclc glutamate-cysteine ligase catalytic subunit ISO (MGI:MGI:3695876|PMID:17189825) MGI PMID:17189825 MGI:MGI:3695876 NCBI chrNW_004955411:2,593,523...2,617,553 JBrowse link
G Gsk3a glycogen synthase kinase 3 alpha ISO (PMID:25897075) ARUK-UCL PMID:25897075 NCBI chrNW_004955555:668,641...676,351 JBrowse link
G Gsk3b glycogen synthase kinase 3 beta ISO (PMID:25897075)
(MGI:MGI:5437589|PMID:22660580)
(PMID:19364825)
ARUK-UCL
MGI
FlyBase
PMID:19364825, PMID:22660580, PMID:25897075 MGI:MGI:5437589 NCBI chrNW_004955427:19,489,972...19,671,137 JBrowse link
G Hspbp1 HSPA (Hsp70) binding protein 1 ISO (PMID:16831871) BHF-UCL PMID:16831871 NCBI chrNW_004955567:948,040...960,621 JBrowse link
G Il33 interleukin 33 ISO (MGI:MGI:5437589|PMID:22660580) MGI PMID:22660580 MGI:MGI:5437589 NCBI chrNW_004955434:10,145,449...10,187,595 JBrowse link
G Klhl40 kelch like family member 40 ISO (MGI:MGI:5700633|PMID:25940086) UniProtKB PMID:25940086 MGI:MGI:5700633 NCBI chrNW_004955420:28,117,553...28,122,391 JBrowse link
G Lrrk2 leucine rich repeat kinase 2 ISO (MGI:MGI:4454597|PMID:20457918) BHF-UCL PMID:20457918 MGI:MGI:4454597 NCBI chrNW_004955505:84,324...216,923 JBrowse link
G Mdm2 MDM2 proto-oncogene ISO (PMID:11278372) BHF-UCL PMID:11278372 NCBI chrNW_004955458:15,264,028...15,287,290 JBrowse link
G Nkd2 NKD inhibitor of WNT signaling pathway 2 ISO (PMID:20177058) BHF-UCL PMID:20177058 NCBI chrNW_004955504:507,253...527,275 JBrowse link
G Nop53 NOP53 ribosome biogenesis factor ISO (MGI:MGI:5897550|PMID:21804542)
(PMID:25818168), (PMID:27323397)
UniProtKB PMID:21804542, PMID:25818168, PMID:27323397 MGI:MGI:5897550 NCBI chrNW_004955574:1,505,997...1,514,680 JBrowse link
G Nub1 negative regulator of ubiquitin like proteins 1 ISO (PMID:16707496) UniProtKB PMID:16707496 NCBI chrNW_004955491:5,709,791...5,737,620 JBrowse link
G Pias1 protein inhibitor of activated STAT 1 ISO (MGI:MGI:5487503|PMID:22406621) UniProtKB PMID:22406621 MGI:MGI:5487503 NCBI chrNW_004955450:7,896,741...7,991,045 JBrowse link
G Plk1 polo like kinase 1 ISO (PMID:19473992) UniProtKB PMID:19473992 NCBI chrNW_004955493:2,206,353...2,217,231 JBrowse link
G Plk2 polo like kinase 2 ISO RGD PMID:18723513 RGD:7241135 NCBI chrNW_004955446:9,671,090...9,676,956 JBrowse link
G Prickle1 prickle planar cell polarity protein 1 ISO (PMID:17030191) BHF-UCL PMID:17030191 NCBI chrNW_004955500:1,897,899...1,990,791 JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO (MGI:MGI:5543313|PMID:23858059) ParkinsonsUK-UCL PMID:23858059 MGI:MGI:5543313 NCBI chrNW_004955439:18,664,230...19,953,358 JBrowse link
G Psen1 presenilin 1 ISO (MGI:MGI:4887523|PMID:20208556) BHF-UCL PMID:20208556 MGI:MGI:4887523 NCBI chrNW_004955523:2,128,529...2,210,737 JBrowse link
G Psen2 presenilin 2 ISO (MGI:MGI:4887523|PMID:20208556) BHF-UCL PMID:20208556 MGI:MGI:4887523 NCBI chrNW_004955406:5,727,367...5,748,798 JBrowse link
G Psmd10 proteasome 26S subunit, non-ATPase 10 ISO (PMID:16023600) UniProtKB PMID:16023600 NCBI chrNW_004955490:7,825,202...7,832,347 JBrowse link
G Rack1 receptor for activated C kinase 1 ISO (PMID:19785988) UniProtKB PMID:19785988 NCBI chrNW_004955530:78,488...83,297 JBrowse link
G Rad23a RAD23 homolog A, nucleotide excision repair protein ISO (PMID:26296656) CAFA PMID:26296656 NCBI chrNW_004955415:31,991,478...31,997,277 JBrowse link
G Rbx1 ring-box 1 ISO (PMID:14739464) UniProtKB PMID:14739464 NCBI chrNW_004955413:26,579,759...26,592,980 JBrowse link
G Rchy1 ring finger and CHY zinc finger domain containing 1 ISO (PMID:19483087) UniProtKB PMID:19483087 NCBI chrNW_004955474:1,463,817...1,475,677 JBrowse link
G Rnf180 ring finger protein 180 ISO (MGI:MGI:3819024|PMID:18363970), (MGI:MGI:5505713|PMID:23926250) MGI PMID:18363970, PMID:23926250 MGI:MGI:3819024, MGI:MGI:5505713 NCBI chrNW_004955446:4,544,128...4,733,295 JBrowse link
G Sh3rf2 SH3 domain containing ring finger 2 ISO (PMID:22128169) UniProtKB
UniProt
PMID:22128169 RGD:13673844 NCBI chrNW_004955415:8,024,984...8,148,970 JBrowse link
G Sirt2 sirtuin 2 ISO (MGI:MGI:5574427|PMID:24681946) UniProtKB PMID:24681946 MGI:MGI:5574427 NCBI chrNW_004955468:626,365...644,441 JBrowse link
G Smad7 SMAD family member 7 ISO (PMID:11278251) BHF-UCL PMID:11278251 NCBI chrNW_004955402:34,028,184...34,058,949 JBrowse link
G Socs5 suppressor of cytokine signaling 5 ISO (PMID:15590694) UniProtKB PMID:15590694 NCBI chrNW_004955441:13,593,342...13,657,389 JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 ISO (PMID:11146632) HGNC PMID:11146632 NCBI chrNW_004955442:16,521,130...16,523,733 JBrowse link
G Sumo1 small ubiquitin like modifier 1 ISO (PMID:18408734) UniProtKB PMID:18408734 NCBI chrNW_004955457:12,538,974...12,565,803 JBrowse link
G Sumo2 small ubiquitin like modifier 2 ISO (PMID:18408734) UniProtKB PMID:18408734 NCBI chrNW_004955553:2,045,277...2,066,023 JBrowse link
G Taf1 TATA-box binding protein associated factor 1 ISO (PMID:15053879) BHF-UCL PMID:15053879 NCBI chrNW_004955475:10,930,175...11,006,876 JBrowse link
G Trib1 tribbles pseudokinase 1 ISO (MGI:MGI:4457446|PMID:20410507) BHF-UCL PMID:20410507 MGI:MGI:4457446 NCBI chrNW_004955461:494,003...501,928 JBrowse link
G Trib2 tribbles pseudokinase 2 ISO (MGI:MGI:4457446|PMID:20410507) BHF-UCL PMID:20410507 MGI:MGI:4457446 NCBI chrNW_004955487:6,889,571...6,915,068 JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 ISO RGD PMID:12750002 RGD:1299567 NCBI chrNW_004955454:7,951,876...7,998,686 JBrowse link
G Usp5 ubiquitin specific peptidase 5 ISO (PMID:19098288) UniProtKB PMID:19098288 NCBI chrNW_004955413:4,451,530...4,466,832 JBrowse link
G Vcp valosin containing protein ISO (PMID:9452483) BHF-UCL
RGD
PMID:9452483, PMID:16103111 RGD:1599730 NCBI chrNW_004955472:1,111,649...1,124,076 JBrowse link
G Zer1 zyg-11 related cell cycle regulator ISO (PMID:31273098) UniProt PMID:31273098 NCBI chrNW_004955570:1,138,477...1,153,246 JBrowse link
G Zfand2a zinc finger AN1-type containing 2A ISO (MGI:MGI:3663213|PMID:16973439) MGI PMID:16973439 MGI:MGI:3663213 NCBI chrNW_004955460:8,881,981...8,892,404 JBrowse link
G Zyg11b zyg-11 family member B, cell cycle regulator ISO (PMID:31273098) UniProt PMID:31273098 NCBI chrNW_004955464:6,354,510...6,404,668 JBrowse link
positive regulation of proteasomal ubiquitin-dependent protein catabolic process involved in cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plk3 polo like kinase 3 ISO (PMID:20889502) UniProtKB PMID:20889502 NCBI chrNW_004955464:13,419,562...13,424,104 JBrowse link
G Sirt2 sirtuin 2 ISO (PMID:24681946) UniProtKB PMID:24681946 NCBI chrNW_004955468:626,365...644,441 JBrowse link
positive regulation of protein catabolic process in the vacuole term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd81 CD81 molecule ISO (PMID:25635054) BHF-UCL PMID:25635054 NCBI chrNW_004955422:14,155,682...14,175,181 JBrowse link
positive regulation of proteolysis involved in cellular protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5if1 ATP synthase inhibitory factor subunit 1 ISO (PMID:24005319) ParkinsonsUK-UCL PMID:24005319 NCBI chrNW_004955452:7,372,917...7,375,072 JBrowse link
G Ctsc cathepsin C ISO PMID:18307834 ParkinsonsUK-UCL PMID:18307834 RGD:8661625 NCBI chrNW_004955414:5,062,355...5,092,631 JBrowse link
G Gba glucosylceramidase beta ISO (MGI:MGI:5141165|PMID:21700325)
(PMID:21700325)
ParkinsonsUK-UCL PMID:21700325 MGI:MGI:5141165 NCBI chrNW_004955545:1,682,097...1,689,373 JBrowse link
G Rgn regucalcin ISO RGD PMID:1513338 RGD:9590188 NCBI chrNW_004955516:958,416...978,829 JBrowse link
positive regulation of retrograde protein transport, ER to cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcap31 B cell receptor associated protein 31 ISO (PMID:18555783) ParkinsonsUK-UCL PMID:18555783 NCBI chrNW_004955580:429,223...459,168 JBrowse link
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 ISO (MGI:MGI:5563002|PMID:24200403)
(PMID:24200403)
ParkinsonsUK-UCL PMID:24200403 MGI:MGI:5563002 NCBI chrNW_004955421:8,196,631...8,225,561 JBrowse link
G Edem2 ER degradation enhancing alpha-mannosidase like protein 2 ISO (PMID:24200403)
(MGI:MGI:5563002|PMID:24200403)
ParkinsonsUK-UCL PMID:24200403 MGI:MGI:5563002 NCBI chrNW_004955422:26,243,034...26,271,849 JBrowse link
positive regulation of transcription factor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxw8 F-box and WD repeat domain containing 8 ISO (MGI:MGI:6148490|PMID:29153991) UniProtKB PMID:29153991 MGI:MGI:6148490 NCBI chrNW_004955455:14,099,888...14,204,889 JBrowse link
G Mapk8 mitogen-activated protein kinase 8 ISO (MGI:MGI:6148490|PMID:29153991) UniProtKB PMID:29153991 MGI:MGI:6148490 NCBI chrNW_004955556:1,593,552...1,705,543 JBrowse link
G Mapk9 mitogen-activated protein kinase 9 ISO (MGI:MGI:6148490|PMID:29153991) UniProtKB PMID:29153991 MGI:MGI:6148490 NCBI chrNW_004955408:391,094...430,638 JBrowse link
G Sirt6 sirtuin 6 ISO (PMID:27457971) CACAO PMID:27457971 NCBI chrNW_004955495:4,641,883...4,650,518 JBrowse link
positive regulation of ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agbl4 ATP/GTP binding protein like 4 ISO (MGI:MGI:6149282|PMID:29593216) MGI PMID:29593216 MGI:MGI:6149282 NCBI chrNW_004955464:8,847,401...10,195,184 JBrowse link
G Axin1 axin 1 ISO (MGI:MGI:3628833|PMID:16601693)
PMID:10228155
MGI
BHF-UCL
PMID:10228155, PMID:16601693 MGI:MGI:3628833, RGD:8553327 NCBI chrNW_004955442:16,845,728...16,898,301 JBrowse link
G Ccdc22 coiled-coil domain containing 22 ISO (PMID:23563313) UniProtKB PMID:23563313 NCBI chrNW_004955543:719,185...731,788 JBrowse link
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 NOT ISO (PMID:16173922) UniProtKB PMID:16173922 NCBI chrNW_004955451:13,160,811...13,170,012 JBrowse link
G Clu clusterin ISO (PMID:20068069) UniProtKB PMID:20068069 NCBI chrNW_004955403:50,160,598...50,175,876 JBrowse link
G Disc1 DISC1 scaffold protein ISO (MGI:MGI:4837265|PMID:20880836) MGI PMID:20880836 MGI:MGI:4837265 NCBI chrNW_004955492:6,946,528...7,239,328 JBrowse link
G Egf epidermal growth factor ISO (MGI:MGI:4887523|PMID:20208556) BHF-UCL PMID:20208556 MGI:MGI:4887523 NCBI chrNW_004955496:325,954...401,430 JBrowse link
G Fbxo22 F-box protein 22 ISO (MGI:MGI:3840749|PMID:19319192) MGI PMID:19319192 MGI:MGI:3840749 NCBI chrNW_004955450:1,152,383...1,171,257 JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 ISO (MGI:MGI:6282935|PMID:27238018)
(PMID:27238018)
(PMID:20208556)
UniProt
BHF-UCL
PMID:20208556, PMID:27238018 MGI:MGI:6282935 NCBI chrNW_004955471:6,852,459...7,026,590 JBrowse link
G Magef1 MAGE family member F1 ISO (PMID:29225034) UniProtKB PMID:29225034 NCBI chrNW_004955420:22,797,581...22,799,301 JBrowse link
G Pten phosphatase and tensin homolog ISO (PMID:21241890) BHF-UCL PMID:21241890 NCBI chrNW_004955425:5,007,811...5,091,829 JBrowse link
G Ptk2 protein tyrosine kinase 2 ISO (MGI:MGI:5306293|PMID:18206965) UniProtKB PMID:18206965 MGI:MGI:5306293 NCBI chrNW_004955461:14,337,914...14,622,779 JBrowse link
G Ptk2b protein tyrosine kinase 2 beta ISO (MGI:MGI:4453113|PMID:19880522) UniProtKB PMID:19880522 MGI:MGI:4453113 NCBI chrNW_004955403:49,856,056...49,970,800 JBrowse link
G Rnf139 ring finger protein 139 ISO (PMID:25239945) UniProtKB PMID:25239945 NCBI chrNW_004955540:3,140,649...3,153,546 JBrowse link
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 ISO (PMID:21454619) CACAO PMID:21454619 NCBI chrNW_004955460:14,774,545...14,860,783 JBrowse link
G Sumo3 small ubiquitin like modifier 3 ISO (MGI:MGI:3813414|PMID:18644859) MGI PMID:18644859 MGI:MGI:3813414 NCBI chrNW_004955407:41,725,992...41,732,692 JBrowse link
G Trim67 tripartite motif containing 67 ISO (MGI:MGI:5427306|PMID:22337885) MGI PMID:22337885 MGI:MGI:5427306 NCBI chrNW_004955492:7,538,492...7,578,257 JBrowse link
prenylated protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcyox1 prenylcysteine oxidase 1 ISO (PMID:10585463) BHF-UCL PMID:10585463 NCBI chrNW_004955424:14,854,755...14,865,920 JBrowse link
G Zmpste24 zinc metallopeptidase STE24 ISO (MGI:MGI:2137968|PMID:11399759) MGI PMID:11399759 MGI:MGI:2137968 NCBI chrNW_004955537:82,724...134,609 JBrowse link
proteasomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ate1 arginyltransferase 1 ISO (PMID:25970626) MGI PMID:25970626 NCBI chrNW_004955477:126,626...281,898 JBrowse link
G Bag6 BAG cochaperone 6 ISO (PMID:26565908) UniProtKB PMID:26565908 NCBI chrNW_004955437:176,848...188,243 JBrowse link
G Cul4b cullin 4B ISO (PMID:25970626) MGI PMID:25970626 NCBI chrNW_004955572:1,308,491...1,365,147 JBrowse link
G Ddb1 damage specific DNA binding protein 1 ISO (PMID:25970626) MGI PMID:25970626 NCBI chrNW_004955511:6,209,777...6,233,594 JBrowse link
G Ddi1 DNA damage inducible 1 homolog 1 ISO (PMID:29290612) UniProt PMID:29290612 NCBI chrNW_004955412:6,980,778...6,982,453 JBrowse link
G Ddi2 DNA damage inducible 1 homolog 2 ISO (PMID:29290612) UniProt PMID:29290612 NCBI chrNW_004955527:2,498,211...2,534,768 JBrowse link
G Fbxo44 F-box protein 44 ISO (PMID:25970626) MGI PMID:25970626 NCBI chrNW_004955486:2,204,470...2,210,604 JBrowse link
G Marchf6 membrane associated ring-CH-type finger 6 ISO (PMID:15673284) ParkinsonsUK-UCL PMID:15673284 NCBI chrNW_004955426:228,807...278,888 JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 ISO (MGI:MGI:3785131|PMID:18227153), (MGI:MGI:5303043|PMID:21874017) UniProtKB PMID:18227153, PMID:21874017 MGI:MGI:3785131, MGI:MGI:5303043 NCBI chrNW_004955451:14,743,763...14,750,903 JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 ISO (PMID:15901672) UniProtKB PMID:15901672 NCBI chrNW_004955402:44,005,517...44,010,722 JBrowse link
G Pmp22 peripheral myelin protein 22 ISO (MGI:MGI:3575390|PMID:14627652) MGI PMID:14627652 MGI:MGI:3575390 NCBI chrNW_004955467:2,422,181...2,456,925 JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO (PMID:19725078) ParkinsonsUK-UCL PMID:19725078 NCBI chrNW_004955439:18,664,230...19,953,358 JBrowse link
G Prpf19 pre-mRNA processing factor 19 ISO (PMID:17349974)
(MGI:MGI:5586800|PMID:17349974)
UniProtKB PMID:17349974 MGI:MGI:5586800 NCBI chrNW_004955511:5,546,212...5,552,368 JBrowse link
G Rnf41 ring finger protein 41 ISO (PMID:18541373) ParkinsonsUK-UCL PMID:18541373 NCBI chrNW_004955458:3,799,450...3,833,269 JBrowse link
G Socs6 suppressor of cytokine signaling 6 ISO (PMID:20007709) MGI PMID:20007709 NCBI chrNW_004955402:53,847,859...53,876,245 JBrowse link
G Vcp valosin containing protein ISO (PMID:26565908) UniProtKB PMID:26565908 NCBI chrNW_004955472:1,111,649...1,124,076 JBrowse link
G Vhl von Hippel-Lindau tumor suppressor ISO (MGI:MGI:3818351|PMID:17981124) MGI PMID:17981124 MGI:MGI:3818351 NCBI chrNW_004955561:1,573,525...1,578,295 JBrowse link
proteasomal ubiquitin-independent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enc1 ectodermal-neural cortex 1 ISO (PMID:19424503) UniProtKB PMID:19424503 NCBI chrNW_004955425:26,017,684...26,029,262 JBrowse link
G Nfe2l2 nuclear factor, erythroid 2 like 2 ISO (PMID:19424503) UniProtKB PMID:19424503 NCBI chrNW_004955403:19,510,122...19,536,428 JBrowse link
G Psme4 proteasome activator subunit 4 ISO (MGI:MGI:5494329|PMID:23706739) UniProtKB PMID:23706739 MGI:MGI:5494329 NCBI chrNW_004955441:19,586,567...19,663,335 JBrowse link
proteasome-mediated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agap3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 ISO (MGI:MGI:3616374|PMID:16461359) MGI PMID:16461359 MGI:MGI:3616374 NCBI chrNW_004955491:5,546,097...5,573,866 JBrowse link
G Arntl aryl hydrocarbon receptor nuclear translocator like ISO (MGI:MGI:5495336|PMID:23395176) UniProtKB PMID:23395176 MGI:MGI:5495336 NCBI chrNW_004955414:28,652,663...28,748,360 JBrowse link
G Arrb1 arrestin beta 1 ISO (PMID:15878855) UniProtKB PMID:15878855 NCBI chrNW_004955414:16,478,843...16,568,050 JBrowse link
G Arrb2 arrestin beta 2 ISO (PMID:15878855) UniProtKB PMID:15878855 NCBI chrNW_004955467:10,109,985...10,118,687 JBrowse link
G Atxn3 ataxin 3 ISO (MGI:MGI:5318000|PMID:21855799) UniProtKB PMID:21855799 MGI:MGI:5318000 NCBI chrNW_004955438:14,405,415...14,443,457 JBrowse link
G Bag6 BAG cochaperone 6 ISO (MGI:MGI:5780912|PMID:26692333) UniProtKB PMID:26692333 MGI:MGI:5780912 NCBI chrNW_004955437:176,848...188,243 JBrowse link
G Bfar bifunctional apoptosis regulator ISO (PMID:21068390) ParkinsonsUK-UCL PMID:21068390 NCBI chrNW_004955442:4,229,236...4,255,623 JBrowse link
G Birc2 baculoviral IAP repeat containing 2 ISO (PMID:11907583) UniProtKB PMID:11907583 NCBI chrNW_004955412:5,658,322...5,685,628 JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase ISO (PMID:15917222) UniProtKB PMID:15917222 NCBI chrNW_004955485:8,724,375...8,846,647 JBrowse link
G Cd2ap CD2 associated protein ISO RGD PMID:15001553 RGD:1302417 NCBI chrNW_004955437:12,005,399...12,087,014 JBrowse link
G Cdc34 cell division cycle 34, ubiqiutin conjugating enzyme ISO (PMID:10373550), (PMID:20347421) UniProtKB PMID:10373550, PMID:20347421 NCBI chrNW_004955495:7,170,419...7,178,093 JBrowse link
G Clock clock circadian regulator ISO (MGI:MGI:5495336|PMID:23395176) UniProtKB PMID:23395176 MGI:MGI:5495336 NCBI chrNW_004955447:15,394,496...15,537,969 JBrowse link
G Cop1 COP1 E3 ubiquitin ligase ISO (PMID:14739464) UniProtKB PMID:14739464 NCBI chrNW_004955406:15,662,546...15,859,306 JBrowse link
G Crbn cereblon ISO (PMID:20223979) UniProtKB PMID:20223979 NCBI chrNW_004955421:10,166,927...10,190,470 JBrowse link
G Ctnnb1 catenin beta 1 ISO (PMID:29374064) UniProt PMID:29374064 NCBI chrNW_004955420:29,030,716...29,047,447 JBrowse link
G Cul3 cullin 3 ISO (PMID:19261606), (PMID:19782033), (PMID:20389280)
(MGI:MGI:4836774|PMID:20811152)
UniProtKB
MGI
PMID:19261606, PMID:19782033, PMID:20389280, PMID:20811152 MGI:MGI:4836774 NCBI chrNW_004955453:9,546,554...9,629,976 JBrowse link
G Cul4a cullin 4A ISO (MGI:MGI:3777067|PMID:16467204)
(PMID:14739464)
MGI
UniProtKB
PMID:14739464, PMID:16467204 MGI:MGI:3777067 NCBI chrNW_004955404:583,261...617,914 JBrowse link
G Ddb1 damage specific DNA binding protein 1 ISO (PMID:14739464), (PMID:20223979) UniProtKB PMID:14739464, PMID:20223979 NCBI chrNW_004955511:6,209,777...6,233,594 JBrowse link
G Ddit3 DNA damage inducible transcript 3 ISO (PMID:17872950) UniProtKB PMID:17872950 NCBI chrNW_004955458:5,232,979...5,238,513 JBrowse link
G Derl1 derlin 1 ISO (MGI:MGI:5780912|PMID:26692333) UniProtKB PMID:26692333 MGI:MGI:5780912 NCBI chrNW_004955540:1,918,230...1,944,186 JBrowse link
G Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 ISO (PMID:21625540) UniProtKB PMID:21625540 NCBI chrNW_004955453:14,147,286...14,154,396 JBrowse link
G Edem3 ER degradation enhancing alpha-mannosidase like protein 3 ISO (MGI:MGI:3654428|PMID:16431915) MGI PMID:16431915 MGI:MGI:3654428 NCBI chrNW_004955406:23,329,400...23,401,282 JBrowse link
G Epm2a EPM2A glucan phosphatase, laforin ISO (MGI:MGI:5607479|PMID:24914213) MGI PMID:24914213 MGI:MGI:5607479 NCBI chrNW_004955436:14,925,452...14,982,357 JBrowse link
G Faf2 Fas associated factor family member 2 ISO (MGI:MGI:5780912|PMID:26692333) UniProtKB PMID:26692333 MGI:MGI:5780912 NCBI chrNW_004955408:28,737,597...28,797,143 JBrowse link
G Fbxl17 F-box and leucine rich repeat protein 17 ISO (PMID:30190310) UniProt PMID:30190310 NCBI chrNW_004955418:6,314,503...6,758,531 JBrowse link
G Fbxl19 F-box and leucine rich repeat protein 19 ISO (PMID:22660580)
(MGI:MGI:5437589|PMID:22660580)
MGI PMID:22660580 MGI:MGI:5437589 NCBI chrNW_004955493:7,768,802...7,798,546 JBrowse link
G Fbxl22 F-box and leucine rich repeat protein 22 ISO (PMID:22972877) MGI PMID:22972877 NCBI chrNW_004955450:11,719,678...11,728,093 JBrowse link
G Fbxl3 F-box and leucine rich repeat protein 3 ISO (MGI:MGI:3715674|PMID:17462724) UniProtKB PMID:17462724 MGI:MGI:3715674 NCBI chrNW_004955404:30,215,140...30,229,798 JBrowse link
G Fbxo45 F-box protein 45 ISO (MGI:MGI:4452423|PMID:19996097) UniProtKB PMID:19996097 MGI:MGI:4452423 NCBI chrNW_004955420:12,714,749...12,727,600 JBrowse link
G Fbxw11 F-box and WD repeat domain containing 11 ISO (PMID:20347421) UniProtKB PMID:20347421 NCBI chrNW_004955408:24,703,477...24,834,522 JBrowse link
G Fbxw5 F-box and WD repeat domain containing 5 ISO (PMID:18381890) UniProtKB PMID:18381890 NCBI chrNW_004955513:4,993,161...4,996,922 JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 ISO (PMID:25897075) ARUK-UCL PMID:25897075 NCBI chrNW_004955471:6,852,459...7,026,590 JBrowse link
G Gsk3a glycogen synthase kinase 3 alpha ISO (MGI:MGI:5514334|PMID:16543145) UniProtKB PMID:16543145 MGI:MGI:5514334 NCBI chrNW_004955555:668,641...676,351 JBrowse link
G Hectd3 HECT domain E3 ubiquitin protein ligase 3 ISO (PMID:18194665) UniProtKB PMID:18194665 NCBI chrNW_004955464:13,230,534...13,238,953 JBrowse link
G Herc2 HECT and RLD domain containing E3 ubiquitin protein ligase 2 ISO (MGI:MGI:5780912|PMID:26692333) UniProtKB PMID:26692333 MGI:MGI:5780912 NCBI chrNW_004955533:1,304,675...1,489,041 JBrowse link
G Kat5 lysine acetyltransferase 5 ISO (PMID:18397884) UniProtKB PMID:18397884 NCBI chrNW_004955422:19,557,498...19,565,044 JBrowse link
G Kctd13 potassium channel tetramerization domain containing 13 ISO (PMID:19782033) UniProtKB PMID:19782033 NCBI chrNW_004955493:7,039,027...7,055,798 JBrowse link
G Kctd17 potassium channel tetramerization domain containing 17 ISO (PMID:25270598) UniProtKB PMID:25270598 NCBI chrNW_004955413:23,568,540...23,578,292 JBrowse link
G Kif14 kinesin family member 14 ISO (PMID:24854087) UniProtKB PMID:24854087 NCBI chrNW_004955406:36,732,135...36,791,756 JBrowse link
G Klhl20 kelch like family member 20 ISO (PMID:20389280) UniProtKB PMID:20389280 NCBI chrNW_004955406:13,891,589...13,938,964 JBrowse link
G Klhl22 kelch like family member 22 ISO (PMID:29769719) UniProtKB PMID:29769719 NCBI chrNW_004955442:19,010,971...19,051,300 JBrowse link
G Klhl42 kelch like family member 42 ISO (PMID:19261606) UniProtKB PMID:19261606 NCBI chrNW_004955505:7,046,274...7,078,175 JBrowse link
G Marchf6 membrane associated ring-CH-type finger 6 ISO (PMID:24449766) UniProt PMID:24449766 NCBI chrNW_004955426:228,807...278,888 JBrowse link
G Mta1 metastasis associated 1 ISO (PMID:19805145) UniProtKB PMID:19805145 NCBI chrNW_004955538:3,630,383...3,671,005 JBrowse link
G Nedd4l NEDD4 like E3 ubiquitin protein ligase ISO (PMID:21463633) BHF-UCL PMID:21463633 NCBI chrNW_004955402:42,339,380...42,688,661 JBrowse link
G Nfe2l2 nuclear factor, erythroid 2 like 2 ISO (PMID:15983046) UniProtKB PMID:15983046 NCBI chrNW_004955403:19,510,122...19,536,428 JBrowse link
G Nhlrc1 NHL repeat containing E3 ubiquitin protein ligase 1 ISO (PMID:15930137)
(MGI:MGI:5607479|PMID:24914213)
UniProtKB
MGI
PMID:15930137, PMID:24914213 MGI:MGI:5607479 NCBI chrNW_004955483:8,078,796...8,079,612 JBrowse link
G Otud5 OTU deubiquitinase 5 ISO (MGI:MGI:5621075|PMID:25470037) MGI PMID:25470037 MGI:MGI:5621075 NCBI chrNW_004955543:452,172...484,564 JBrowse link
G Pcbp2 poly(rC) binding protein 2 ISO (PMID:19881509) UniProtKB PMID:19881509 NCBI chrNW_004955458:747,770...773,885 JBrowse link
G Pcnp PEST proteolytic signal containing nuclear protein ISO (PMID:14741369) HGNC PMID:14741369 NCBI chrNW_004955427:3,142,340...3,162,172 JBrowse link
G Peli1 pellino E3 ubiquitin protein ligase 1 ISO (PMID:29883609) UniProtKB PMID:29883609 NCBI chrNW_004955424:20,212,077...20,263,761 JBrowse link
G Pml PML nuclear body scaffold ISO (PMID:22406621) UniProtKB PMID:22406621 NCBI chrNW_004955450:3,654,854...3,692,057 JBrowse link
G Pmp22 peripheral myelin protein 22 ISO (MGI:MGI:3574149|PMID:15748170) MGI PMID:15748170 MGI:MGI:3574149 NCBI chrNW_004955467:2,422,181...2,456,925 JBrowse link
G Ppp2cb protein phosphatase 2 catalytic subunit beta ISO (MGI:MGI:3694309|PMID:16717086) MGI PMID:16717086 MGI:MGI:3694309 NCBI chrNW_004955463:7,229,717...7,249,490 JBrowse link
G Ppp2r5c protein phosphatase 2 regulatory subunit B'gamma ISO (PMID:16717086) MGI PMID:16717086 NCBI chrNW_004955538:1,233,511...1,363,956 JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO (PMID:11439185), (PMID:21376232) ParkinsonsUK-UCL PMID:11439185, PMID:21376232 NCBI chrNW_004955439:18,664,230...19,953,358 JBrowse link
G Psmb5 proteasome 20S subunit beta 5 ISO (MGI:MGI:3047032|PMID:15198663) MGI PMID:15198663 MGI:MGI:3047032 NCBI chrNW_004955409:37,269,319...37,278,957 JBrowse link
G Psmc5 proteasome 26S subunit, ATPase 5 ISO (PMID:12110588) UniProtKB PMID:12110588 NCBI chrNW_004955478:7,996,902...8,002,183 JBrowse link
G Rbck1 RANBP2-type and C3HC4-type zinc finger containing 1 ISO (PMID:17449468) UniProtKB PMID:17449468 NCBI chrNW_004955597:272,352...289,348 JBrowse link
G Rbx1 ring-box 1 ISO (PMID:20389280) UniProtKB PMID:20389280 NCBI chrNW_004955413:26,579,759...26,592,980 JBrowse link
G Rffl ring finger and FYVE like domain containing E3 ubiquitin protein ligase ISO (PMID:18382127), (PMID:22609986) UniProtKB PMID:18382127, PMID:22609986 NCBI chrNW_004955481:9,718,369...9,788,048 JBrowse link
G Rnf122 ring finger protein 122 ISO (PMID:20553626) UniProt PMID:20553626 NCBI chrNW_004955463:9,684,546...9,699,939 JBrowse link
G Rnf126 ring finger protein 126 ISO (PMID:24981174) UniProtKB PMID:24981174 NCBI chrNW_004955495:7,083,952...7,098,442 JBrowse link
G Rnf186 ring finger protein 186 ISO (PMID:23896122) UniProtKB PMID:23896122 NCBI chrNW_004955452:433,413...450,261 JBrowse link
G Rnf187 ring finger protein 187 ISO (PMID:20852630) UniProtKB PMID:20852630 NCBI chrNW_004955581:74,876...82,915 JBrowse link
G Rnf216 ring finger protein 216 ISO (PMID:19893624) UniProtKB PMID:19893624 NCBI chrNW_004955460:10,423,736...10,578,421 JBrowse link
G Rnf34 ring finger protein 34 ISO (MGI:MGI:5582154|PMID:22064484)
(PMID:15069192)
(PMID:22064484), (PMID:25012219)
UniProtKB PMID:15069192, PMID:22064484, PMID:25012219 MGI:MGI:5582154 NCBI chrNW_004955482:6,889,112...6,905,139 JBrowse link
G Rnf4 ring finger protein 4 ISO (PMID:18408734), (PMID:20212317), (PMID:20943951) UniProtKB PMID:18408734, PMID:20212317, PMID:20943951 NCBI chrNW_004955514:1,501,943...1,525,689 JBrowse link
G Siah1 siah E3 ubiquitin protein ligase 1 ISO (MGI:MGI:4441266|PMID:16615911) UniProtKB PMID:16615911 MGI:MGI:4441266 NCBI chrNW_004955474:6,970,383...6,982,231 JBrowse link
G Sirt1 sirtuin 1 ISO (PMID:21841822) UniProtKB PMID:21841822 NCBI chrNW_004955425:20,280,725...20,307,663 JBrowse link
G Sirt2 sirtuin 2 ISO (PMID:21841822) UniProtKB PMID:21841822 NCBI chrNW_004955468:626,365...644,441 JBrowse link
G Skp2 S-phase kinase associated protein 2 ISO (PMID:27194766) UniProt PMID:27194766 NCBI chrNW_004955426:20,972,663...20,999,769 JBrowse link
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 ISO (PMID:11278251) BHF-UCL PMID:11278251 NCBI chrNW_004955460:14,774,545...14,860,783 JBrowse link
G Spop speckle type BTB/POZ protein ISO (PMID:22085717)
(MGI:MGI:4836774|PMID:20811152)
UniProtKB
MGI
PMID:20811152, PMID:22085717 MGI:MGI:4836774 NCBI chrNW_004955451:11,897,642...11,970,269 JBrowse link
G Spopl speckle type BTB/POZ protein like ISO (PMID:22632832) UniProtKB PMID:22632832 NCBI chrNW_004955440:5,594,970...5,612,677 JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 ISO (PMID:15781469), (PMID:24613385)
(MGI:MGI:5318000|PMID:21855799)
(PMID:29883609)
HGNC
UniProtKB
PMID:15781469, PMID:21855799, PMID:24613385, PMID:29883609 MGI:MGI:5318000 NCBI chrNW_004955442:16,521,130...16,523,733 JBrowse link
G Tbl1x transducin beta like 1 X-linked ISO (MGI:MGI:3032799|PMID:14980219) MGI PMID:14980219 MGI:MGI:3032799 NCBI chrNW_004955499:7,706,973...7,896,168 JBrowse link
G Tbl1xr1 TBL1X receptor 1 ISO (MGI:MGI:3032799|PMID:14980219) MGI PMID:14980219 MGI:MGI:3032799 NCBI chrNW_004955420:6,546,529...6,705,481 JBrowse link
G Tbx21 T-box transcription factor 21 ISO (MGI:MGI:5543347|PMID:23616576) UniProtKB PMID:23616576 MGI:MGI:5543347 NCBI chrNW_004955451:13,315,237...13,317,888 JBrowse link
G Tnfaip1 TNF alpha induced protein 1 ISO (PMID:19782033) UniProtKB PMID:19782033 NCBI chrNW_004955481:4,786,015...4,799,376 JBrowse link
G Topors TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase ISO (PMID:18077445) UniProtKB PMID:18077445 NCBI chrNW_004955472:3,073,090...3,076,607 JBrowse link
G Trim13 tripartite motif containing 13 ISO (PMID:17314412) UniProtKB PMID:17314412 NCBI chrNW_004955431:3,324,331...3,395,724 JBrowse link
G Trim63 tripartite motif containing 63 ISO (MGI:MGI:3525851|PMID:15601779) MGI PMID:15601779 MGI:MGI:3525851 NCBI chrNW_004955452:5,517,969...5,531,490 JBrowse link
G Trim72 tripartite motif containing 72 ISO (MGI:MGI:5602876|PMID:23965929) MGI PMID:23965929 MGI:MGI:5602876 NCBI chrNW_004955493:8,074,521...8,091,611 JBrowse link
G Trim9 tripartite motif containing 9 ISO (PMID:20085810) UniProtKB PMID:20085810 NCBI chrNW_004955409:11,837,717...11,946,718 JBrowse link
G Ube2b ubiquitin conjugating enzyme E2 B ISO (PMID:10373550) UniProtKB PMID:10373550 NCBI chrNW_004955408:5,552,619...5,572,145 JBrowse link
G Ube2d3 ubiquitin conjugating enzyme E2 D3 ISO (MGI:MGI:3525851|PMID:15601779)
(PMID:20347421)
MGI
UniProtKB
PMID:15601779, PMID:20347421 MGI:MGI:3525851 NCBI chrNW_004955496:5,694,471...5,727,003 JBrowse link
G Ube2h ubiquitin conjugating enzyme E2 H ISO (MGI:MGI:5602876|PMID:23965929) MGI PMID:23965929 MGI:MGI:5602876 NCBI chrNW_004955479:10,535,851...10,650,252 JBrowse link
G Ube2i ubiquitin conjugating enzyme E2 I ISO RGD PMID:9013644 RGD:730030 NCBI chrNW_004955442:15,902,026...15,913,033 JBrowse link
G Ube2w ubiquitin conjugating enzyme E2 W ISO (MGI:MGI:5318000|PMID:21855799) UniProtKB PMID:21855799 MGI:MGI:5318000 NCBI chrNW_004955444:6,454,043...6,536,719 JBrowse link
G Ube4b ubiquitination factor E4B ISO (PMID:23509263) MGI PMID:23509263 NCBI chrNW_004955486:3,518,873...3,626,036 JBrowse link
G Usp44 ubiquitin specific peptidase 44 ISO (MGI:MGI:5448515|PMID:21853124) UniProtKB PMID:21853124 MGI:MGI:5448515 NCBI chrNW_004955405:31,977,045...32,006,733 JBrowse link
G Vcp valosin containing protein ISO (PMID:20104022)
(MGI:MGI:5780912|PMID:26692333)
UniProtKB PMID:20104022, PMID:26692333 MGI:MGI:5780912 NCBI chrNW_004955472:1,111,649...1,124,076 JBrowse link
G Wwp1 WW domain containing E3 ubiquitin protein ligase 1 ISO (MGI:MGI:4820705|PMID:19561640), (MGI:MGI:4820708|PMID:19047365) UniProtKB PMID:19047365, PMID:19561640 MGI:MGI:4820705, MGI:MGI:4820708 NCBI chrNW_004955417:4,011,302...4,064,584 JBrowse link
G Wwp2 WW domain containing E3 ubiquitin protein ligase 2 ISO (PMID:19274063)
(MGI:MGI:4821930|PMID:19997087)
UniProtKB PMID:19274063, PMID:19997087 MGI:MGI:4821930 NCBI chrNW_004955484:6,853,820...6,967,261 JBrowse link
G Zfand2b zinc finger AN1-type containing 2B ISO (MGI:MGI:5780912|PMID:26692333)
(PMID:26692333)
UniProtKB PMID:26692333 MGI:MGI:5780912 NCBI chrNW_004955453:14,222,423...14,225,681 JBrowse link
G Znrf1 zinc and ring finger 1 ISO (MGI:MGI:5306704|PMID:22057101) UniProtKB PMID:22057101 MGI:MGI:5306704 NCBI chrNW_004955484:2,468,392...2,566,539 JBrowse link
protein arginylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ate1 arginyltransferase 1 ISO (MGI:MGI:3587444|PMID:16002466) MGI PMID:16002466 MGI:MGI:3587444 NCBI chrNW_004955477:126,626...281,898 JBrowse link
G LOC102025004 chromosome unknown open reading frame, human C17orf97 ISO (MGI:MGI:5608602|PMID:25369936) UniProtKB PMID:25369936 MGI:MGI:5608602 NCBI chrNW_004955481:2,079,002...2,083,141 JBrowse link
protein catabolic process in the vacuole term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 ISO (MGI:MGI:5500861|PMID:23704209) MGI PMID:23704209 MGI:MGI:5500861 NCBI chrNW_004955422:17,768,469...17,778,976 JBrowse link
protein deubiquitination involved in ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Usp9x ubiquitin specific peptidase 9 X-linked ISO (PMID:29626158)
(MGI:MGI:6157201|PMID:29626158)
UniProt PMID:29626158 MGI:MGI:6157201 NCBI chrNW_004955565:1,479,040...1,602,070 JBrowse link
G Zranb1 zinc finger RANBP2-type containing 1 ISO (PMID:18281465) BHF-UCL PMID:18281465 NCBI chrNW_004955477:2,864,737...2,922,069 JBrowse link
protein localization to cytosolic proteasome complex involved in ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atxn3 ataxin 3 ISO (PMID:17000876) ParkinsonsUK-UCL PMID:17000876 NCBI chrNW_004955438:14,405,415...14,443,457 JBrowse link
protein quality control for misfolded or incompletely synthesized proteins term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atxn3 ataxin 3 ISO (MGI:MGI:5318000|PMID:21855799) UniProtKB PMID:21855799 MGI:MGI:5318000 NCBI chrNW_004955438:14,405,415...14,443,457 JBrowse link
G Fbxl17 F-box and leucine rich repeat protein 17 ISO (PMID:30190310) UniProt PMID:30190310 NCBI chrNW_004955418:6,314,503...6,758,531 JBrowse link
G Hdac6 histone deacetylase 6 ISO (PMID:14675537) BHF-UCL PMID:14675537 NCBI chrNW_004955543:348,314...378,391 JBrowse link
G Oma1 OMA1 zinc metallopeptidase ISO (PMID:20038677) UniProtKB PMID:20038677 NCBI chrNW_004955464:1,305,802...1,393,190 JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 ISO (MGI:MGI:5318000|PMID:21855799)
(PMID:16831871)
UniProtKB
BHF-UCL
PMID:16831871, PMID:21855799 MGI:MGI:5318000 NCBI chrNW_004955442:16,521,130...16,523,733 JBrowse link
G Ube2w ubiquitin conjugating enzyme E2 W ISO (MGI:MGI:5318000|PMID:21855799) UniProtKB PMID:21855799 MGI:MGI:5318000 NCBI chrNW_004955444:6,454,043...6,536,719 JBrowse link
G Yme1l1 YME1 like 1 ATPase ISO (PMID:22262461) UniProtKB PMID:22262461 NCBI chrNW_004955429:2,550,611...2,572,472 JBrowse link
G Zer1 zyg-11 related cell cycle regulator ISO (PMID:31273098) UniProt PMID:31273098 NCBI chrNW_004955570:1,138,477...1,153,246 JBrowse link
G Zyg11b zyg-11 family member B, cell cycle regulator ISO (PMID:31273098) UniProt PMID:31273098 NCBI chrNW_004955464:6,354,510...6,404,668 JBrowse link
proteolysis involved in cellular protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts12 ADAM metallopeptidase with thrombospondin type 1 motif 12 ISO (PMID:16611630)
(PMID:18485748)
BHF-UCL PMID:16611630, PMID:18485748 NCBI chrNW_004955426:19,146,288...19,471,880 JBrowse link
G Adamts7 ADAM metallopeptidase with thrombospondin type 1 motif 7 ISO (PMID:18485748) BHF-UCL PMID:18485748 NCBI chrNW_004955450:525,313...581,006 JBrowse link
G Capn2 calpain 2 ISO (PMID:12150984) BHF-UCL PMID:12150984 NCBI chrNW_004955520:1,287,829...1,315,318 JBrowse link
G Casp8 caspase 8 ISO (PMID:10521396) BHF-UCL PMID:10521396 NCBI chrNW_004955403:322,082...348,591 JBrowse link
G Clpp caseinolytic mitochondrial matrix peptidase proteolytic subunit ISO (PMID:11923310) UniProtKB PMID:11923310 NCBI chrNW_004955495:3,224,968...3,233,482 JBrowse link
G Clpx caseinolytic mitochondrial matrix peptidase chaperone subunit X ISO (PMID:16115876) UniProtKB PMID:16115876 NCBI chrNW_004955450:10,256,124...10,289,832 JBrowse link
G Ctsb cathepsin B ISO (MGI:MGI:2664014|PMID:12782676)
(PMID:22952693)
UniProt
BHF-UCL
PMID:12782676, PMID:22952693 MGI:MGI:2664014 NCBI chrNW_004955403:53,086,236...53,100,217 JBrowse link
G Ctsk cathepsin K ISO (MGI:MGI:2664014|PMID:12782676)
(PMID:11082042), (PMID:22952693)
UniProt PMID:11082042, PMID:12782676, PMID:22952693 MGI:MGI:2664014 NCBI chrNW_004955588:149,036...158,093 JBrowse link
G Ctss cathepsin S ISO (PMID:22952693)
(MGI:MGI:5553237|PMID:22952693)
BHF-UCL PMID:22952693 MGI:MGI:5553237 NCBI chrNW_004955413:99,279...124,793 JBrowse link
G Dnajc3 DnaJ heat shock protein family (Hsp40) member C3 ISO (MGI:MGI:4418606|PMID:18923430) BHF-UCL PMID:18923430 MGI:MGI:4418606 NCBI chrNW_004955404:14,361,540...14,412,533 JBrowse link
G Fap fibroblast activation protein alpha ISO (PMID:10593948) UniProtKB PMID:10593948 NCBI chrNW_004955449:11,623,838...11,694,256 JBrowse link
G Fzr1 fizzy and cell division cycle 20 related 1 ISO (MGI:MGI:5488524|PMID:23541922) MGI PMID:23541922 MGI:MGI:5488524 NCBI chrNW_004955495:5,481,914...5,503,690 JBrowse link
G Gzma granzyme A ISO (PMID:12524539) UniProtKB PMID:12524539 NCBI chrNW_004955446:12,560,831...12,568,023 JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 ISO (MGI:MGI:4418606|PMID:18923430) BHF-UCL PMID:18923430 MGI:MGI:4418606 NCBI chrNW_004955419:3,055,420...3,060,208 JBrowse link
G Ide insulin degrading enzyme ISO degradation of insulin, beta-endorphin and amyloid-beta peptide
(PMID:9830016)
RGD
UniProtKB
PMID:9830016, PMID:15749695 RGD:1626704 NCBI chrNW_004955425:819,461...926,440 JBrowse link
G Lgmn legumain ISO (MGI:MGI:3710046|PMID:17350006) UniProtKB PMID:17350006 MGI:MGI:3710046 NCBI chrNW_004955438:14,905,856...14,938,722 JBrowse link
G Lonp1 lon peptidase 1, mitochondrial ISO (PMID:17420247), (PMID:8248235) UniProtKB PMID:8248235, PMID:17420247 NCBI chrNW_004955495:3,712,173...3,729,556 JBrowse link
G Mdm2 MDM2 proto-oncogene ISO (PMID:25417702) CAFA PMID:25417702 NCBI chrNW_004955458:15,264,028...15,287,290 JBrowse link
G Plg plasminogen ISO RGD PMID:7864083, PMID:12928439 RGD:1299253, RGD:2301095 NCBI chrNW_004955439:20,317,814...20,366,724 JBrowse link
G Psma6 proteasome 20S subunit alpha 6 ISO (PMID:16845397) BHF-UCL PMID:16845397 NCBI chrNW_004955409:25,751,578...25,787,533 JBrowse link
regulation of cellular protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Wdr91 WD repeat domain 91 ISO (PMID:27126989) UniProtKB PMID:27126989 NCBI chrNW_004955494:7,441,880...7,470,174 JBrowse link
regulation of ER-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 ISO (MGI:MGI:5613477|PMID:15147274) ParkinsonsUK-UCL PMID:15147274 MGI:MGI:5613477 NCBI chrNW_004955433:14,609,275...14,621,774 JBrowse link
regulation of ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Usp19 ubiquitin specific peptidase 19 ISO (PMID:25088257) ParkinsonsUK-UCL PMID:25088257 NCBI chrNW_004955532:1,104,212...1,115,267 JBrowse link
regulation of low-density lipoprotein particle receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mylip myosin regulatory light chain interacting protein ISO (MGI:MGI:3849777|PMID:19520913) BHF-UCL PMID:19520913 MGI:MGI:3849777 NCBI chrNW_004955483:9,725,343...9,745,041 JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 ISO (MGI:MGI:3583861|PMID:15741654)
(MGI:MGI:3576461|PMID:15805190)
MGI PMID:15741654, PMID:15805190 MGI:MGI:3576461, MGI:MGI:3583861 NCBI chrNW_004955464:4,424,583...4,439,805 JBrowse link
regulation of lysosomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp13a2 ATPase cation transporting 13A2 ISO (PMID:23499937)
(PMID:24334770)
(MGI:MGI:5780535|PMID:24334770)
ParkinsonsUK-UCL PMID:23499937, PMID:24334770 MGI:MGI:5780535 NCBI chrNW_004955527:1,805,854...1,823,623 JBrowse link
G Mfsd8 major facilitator superfamily domain containing 8 ISO (MGI:MGI:6155546|PMID:29514215) MGI PMID:29514215 MGI:MGI:6155546 NCBI chrNW_004955428:13,519,285...13,548,007 JBrowse link
regulation of proteasomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E ISO (PMID:28111074) UniProt PMID:28111074 NCBI chrNW_004955555:1,998,170...2,002,003 JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase ISO (MGI:MGI:3835892|PMID:19103752) MGI PMID:19103752 MGI:MGI:3835892 NCBI chrNW_004955485:8,724,375...8,846,647 JBrowse link
G Dlgap1 DLG associated protein 1 ISO PMID:15496675 BHF-UCL PMID:15496675 RGD:8553458 NCBI chrNW_004955402:6,809,126...7,105,356 JBrowse link
G Dnaaf4 dynein axonemal assembly factor 4 ISO (PMID:19423554) UniProtKB PMID:19423554 NCBI chrNW_004955409:498,450...523,067 JBrowse link
G Epm2a EPM2A glucan phosphatase, laforin ISO (MGI:MGI:5793002|PMID:27107699) MGI PMID:27107699 MGI:MGI:5793002 NCBI chrNW_004955436:14,925,452...14,982,357 JBrowse link
G Gpx1 glutathione peroxidase 1 ISO (PMID:12751788) BHF-UCL PMID:12751788 NCBI chrNW_004955532:1,298,336...1,298,830 JBrowse link
G Nfe2l1 nuclear factor, erythroid 2 like 1 ISO (MGI:MGI:6198859|PMID:29400713)
(MGI:MGI:5913760|PMID:27920251)
MGI PMID:27920251, PMID:29400713 MGI:MGI:5913760, MGI:MGI:6198859 NCBI chrNW_004955451:13,088,680...13,099,839 JBrowse link
G Nudt15 nudix hydrolase 15 ISO (PMID:19419956) UniProtKB PMID:19419956 NCBI chrNW_004955431:1,767,971...1,775,555 JBrowse link
G Pithd1 PITH domain containing 1 ISO (MGI:MGI:6392185|PMID:31915251) MGI PMID:31915251 MGI:MGI:6392185 NCBI chrNW_004955452:3,696,632...3,708,166 JBrowse link
G Pkd1 polycystin 1, transient receptor potential channel interacting ISO (PMID:23001567)
(MGI:MGI:5461108|PMID:23001567)
MGI PMID:23001567 MGI:MGI:5461108 NCBI chrNW_004955442:15,132,555...15,178,377 JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha ISO (PMID:17565987) UniProtKB PMID:17565987 NCBI chrNW_004955415:32,794,172...32,807,944 JBrowse link
G Psmd14 proteasome 26S subunit, non-ATPase 14 ISO (PMID:18162577) UniProtKB PMID:18162577 NCBI chrNW_004955449:12,306,026...12,400,908 JBrowse link
G Psme3 proteasome activator subunit 3 ISO (PMID:18309296) UniProtKB PMID:18309296 NCBI chrNW_004955451:16,631,379...16,637,331 JBrowse link
G Rhbdf1 rhomboid 5 homolog 1 ISO (PMID:21439629) UniProtKB PMID:21439629 NCBI chrNW_004955442:17,090,962...17,098,068 JBrowse link
G Tmf1 TATA element modulatory factor 1 ISO (MGI:MGI:5488886|PMID:16792503) UniProtKB PMID:16792503 MGI:MGI:5488886 NCBI chrNW_004955421:18,810,199...18,837,767 JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 ISO (PMID:18162577) UniProtKB PMID:18162577 NCBI chrNW_004955406:30,432,652...30,468,741 JBrowse link
G Usp14 ubiquitin specific peptidase 14 ISO (PMID:18162577) UniProtKB PMID:18162577 NCBI chrNW_004955402:9,710,080...9,737,601 JBrowse link
regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Araf A-Raf proto-oncogene, serine/threonine kinase ISO (PMID:22609986) UniProtKB PMID:22609986 NCBI chrNW_004955516:521,479...532,980 JBrowse link
G Commd1 copper metabolism domain containing 1 ISO (PMID:17183367) UniProtKB PMID:17183367 NCBI chrNW_004955424:21,962,837...22,067,745 JBrowse link
G Desi1 desumoylating isopeptidase 1 ISO (PMID:29666234) UniProt PMID:29666234 NCBI chrNW_004955413:27,115,130...27,135,625 JBrowse link
G Foxf2 forkhead box F2 ISO (PMID:29374064) UniProt PMID:29374064 NCBI chrNW_004955465:11,740,374...11,744,619 JBrowse link
G Glmn glomulin, FKBP associated protein ISO (PMID:22405651) MGI PMID:22405651 NCBI chrNW_004955423:2,195,428...2,233,389 JBrowse link
G Gna12 G protein subunit alpha 12 ISO (PMID:22609986)
(MGI:MGI:5448916|PMID:22609986)
UniProtKB PMID:22609986 MGI:MGI:5448916 NCBI chrNW_004955460:12,534,210...12,628,090 JBrowse link
G Rad23a RAD23 homolog A, nucleotide excision repair protein ISO (PMID:12643283) UniProtKB PMID:12643283 NCBI chrNW_004955415:31,991,478...31,997,277 JBrowse link
G Rad23b RAD23 homolog B, nucleotide excision repair protein ISO (PMID:19435460) UniProtKB PMID:19435460 NCBI chrNW_004955419:19,428,415...19,473,181 JBrowse link
G Ube2k ubiquitin conjugating enzyme E2 K ISO (MGI:MGI:3806928|PMID:18710920) MGI PMID:18710920 MGI:MGI:3806928 NCBI chrNW_004955443:7,618,379...7,655,542 JBrowse link
G Ubqln4 ubiquilin 4 ISO (PMID:27113755)
(PMID:15280365)
UniProt
UniProtKB
PMID:15280365, PMID:27113755 NCBI chrNW_004955545:2,218,794...2,236,665 JBrowse link
G Ufl1 UFM1 specific ligase 1 ISO (PMID:20228063) MGI PMID:20228063 NCBI chrNW_004955411:22,548,139...22,577,287 JBrowse link
G Wnt10b Wnt family member 10B ISO (MGI:MGI:3820325|PMID:19056892) MGI PMID:19056892 MGI:MGI:3820325 NCBI chrNW_004955500:7,782,782...7,800,281 JBrowse link
G Xpo1 exportin 1 ISO (PMID:29666234) UniProt PMID:29666234 NCBI chrNW_004955424:22,370,006...22,420,568 JBrowse link
regulation of ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lats1 large tumor suppressor kinase 1 ISO (PMID:28068668) UniProtKB PMID:28068668 NCBI chrNW_004955439:11,559,655...11,611,287 JBrowse link
G Ptk2b protein tyrosine kinase 2 beta ISO (PMID:19880522) UniProtKB PMID:19880522 NCBI chrNW_004955403:49,856,056...49,970,800 JBrowse link
G Ube3a ubiquitin protein ligase E3A ISO (PMID:24728990) UniProtKB PMID:24728990 NCBI chrNW_004955533:3,733,148...3,828,353 JBrowse link
retrograde protein transport, ER to cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aup1 AUP1 lipid droplet regulating VLDL assembly factor ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955424:11,259,288...11,262,413 JBrowse link
G Derl1 derlin 1 ISO (PMID:15215856)
(PMID:15215855), (PMID:25660456)
UniProtKB
MGI
PMID:15215855, PMID:15215856, PMID:25660456 NCBI chrNW_004955540:1,918,230...1,944,186 JBrowse link
G Derl2 derlin 2 ISO (PMID:16449189)
(MGI:MGI:4947015|PMID:21220515)
UniProtKB
MGI
PMID:16449189, PMID:21220515 MGI:MGI:4947015 NCBI chrNW_004955467:10,824,922...10,837,408 JBrowse link
G Faf2 Fas associated factor family member 2 ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955408:28,737,597...28,797,143 JBrowse link
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955433:14,609,275...14,621,774 JBrowse link
G Hsp90b1 heat shock protein 90 beta family member 1 ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955405:38,629,691...38,645,202 JBrowse link
G Nploc4 NPL4 homolog, ubiquitin recognition factor ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955506:1,451,337...1,513,455 JBrowse link
G Sec61b SEC61 translocon beta subunit ISO (PMID:17215517) UniProtKB PMID:17215517 NCBI chrNW_004955419:26,414,891...26,423,260 JBrowse link
G Sel1l SEL1L adaptor subunit of ERAD E3 ubiquitin ligase ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955438:5,030,915...5,082,015 JBrowse link
G Selenos selenoprotein S ISO (PMID:15215856) UniProtKB PMID:15215856 NCBI chrNW_004955416:28,152,984...28,162,173 JBrowse link
G Syvn1 synoviolin 1 ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955422:20,067,933...20,074,947 JBrowse link
G Tmem129 transmembrane protein 129, E3 ubiquitin ligase ISO (PMID:24807418) ParkinsonsUK-UCL PMID:24807418 NCBI chrNW_004955514:968,763...972,918 JBrowse link
G Ufd1 ubiquitin recognition factor in ER associated degradation 1 ISO (PMID:25660456) ParkinsonsUK-UCL PMID:25660456 NCBI chrNW_004955442:18,548,545...18,568,989 JBrowse link
G Vcp valosin containing protein ISO (PMID:25660456)
(MGI:MGI:5634892|PMID:12847084)
(PMID:15215856)
ParkinsonsUK-UCL
UniProtKB
PMID:12847084, PMID:15215856, PMID:25660456 MGI:MGI:5634892 NCBI chrNW_004955472:1,111,649...1,124,076 JBrowse link
SCF-dependent proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase ISO (MGI:MGI:5299399|PMID:21911472) UniProtKB PMID:21911472 MGI:MGI:5299399 NCBI chrNW_004955485:8,724,375...8,846,647 JBrowse link
G Ccnf cyclin F ISO (PMID:20596027) UniProtKB PMID:20596027 NCBI chrNW_004955442:14,864,935...14,890,802 JBrowse link
G Cul1 cullin 1 ISO (PMID:15103331)
(MGI:MGI:4821082|PMID:12140560)
UniProtKB PMID:12140560, PMID:15103331 MGI:MGI:4821082 NCBI chrNW_004955491:4,165,400...4,212,483 JBrowse link
G Fbxl15 F-box and leucine rich repeat protein 15 ISO (PMID:21572392) UniProtKB PMID:21572392 NCBI chrNW_004955485:7,977,222...7,979,246 JBrowse link
G Fbxl17 F-box and leucine rich repeat protein 17 ISO (PMID:24035498), (PMID:27234298) UniProt PMID:24035498, PMID:27234298 NCBI chrNW_004955418:6,314,503...6,758,531 JBrowse link
G Fbxl2 F-box and leucine rich repeat protein 2 ISO (PMID:23604317) UniProtKB PMID:23604317 NCBI chrNW_004955421:512,197...617,524 JBrowse link
G Fbxl3 F-box and leucine rich repeat protein 3 ISO (MGI:MGI:5470183|PMID:23452855), (MGI:MGI:5487698|PMID:23452856)
(PMID:17463251)
UniProtKB PMID:17463251, PMID:23452855, PMID:23452856 MGI:MGI:5470183, MGI:MGI:5487698 NCBI chrNW_004955404:30,215,140...30,229,798 JBrowse link
G Fbxl5 F-box and leucine rich repeat protein 5 ISO (PMID:17532294), (PMID:19762596), (PMID:19762597) UniProtKB PMID:17532294, PMID:19762596, PMID:19762597 NCBI chrNW_004955480:8,360,957...8,397,903 JBrowse link
G Fbxl7 F-box and leucine rich repeat protein 7 ISO (MGI:MGI:5426128|PMID:22306998), (MGI:MGI:6368091|PMID:25778398)
(PMID:25778398)
(PMID:28218735)
UniProt PMID:22306998, PMID:25778398, PMID:28218735 MGI:MGI:5426128, MGI:MGI:6368091 NCBI chrNW_004955426:4,659,787...5,044,074 JBrowse link
G Fbxo2 F-box protein 2 ISO (MGI:MGI:4821082|PMID:12140560) UniProtKB PMID:12140560 MGI:MGI:4821082 NCBI chrNW_004955486:2,212,001...2,217,260 JBrowse link
G Fbxo31 F-box protein 31 ISO (PMID:19412162) UniProtKB PMID:19412162 NCBI chrNW_004955541:1,811,010...1,828,734 JBrowse link
G Fbxo38 F-box protein 38 ISO (PMID:30487606) UniProt PMID:30487606 NCBI chrNW_004955415:5,841,269...5,888,830 JBrowse link
G Fbxo4 F-box protein 4 ISO (PMID:20159592) UniProtKB PMID:20159592 NCBI chrNW_004955426:26,046,742...26,066,747 JBrowse link
G Fbxo6 F-box protein 6 ISO (MGI:MGI:2679753|PMID:12939278)
(PMID:19716789)
UniProtKB PMID:12939278, PMID:19716789 MGI:MGI:2679753 NCBI chrNW_004955486:2,197,296...2,205,947 JBrowse link
G Fbxo9 F-box protein 9 ISO (PMID:23263282) UniProtKB PMID:23263282 NCBI chrNW_004955411:2,960,517...2,993,787 JBrowse link
G Fbxw11 F-box and WD repeat domain containing 11 ISO (PMID:20347421)
(MGI:MGI:2176150|PMID:11896578)
UniProtKB PMID:11896578, PMID:20347421 MGI:MGI:2176150 NCBI chrNW_004955408:24,703,477...24,834,522 JBrowse link
G Fbxw5 F-box and WD repeat domain containing 5 ISO (MGI:MGI:5476881|PMID:23314863)
(PMID:21725316)
UniProtKB PMID:21725316, PMID:23314863 MGI:MGI:5476881 NCBI chrNW_004955513:4,993,161...4,996,922 JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 ISO (PMID:15103331), (PMID:17434132)
(PMID:28007894)
(MGI:MGI:6107392|PMID:21953459)
UniProtKB PMID:15103331, PMID:17434132, PMID:21953459, PMID:28007894 MGI:MGI:6107392 NCBI chrNW_004955471:6,852,459...7,026,590 JBrowse link
G Kif14 kinesin family member 14 ISO (PMID:24854087) UniProtKB PMID:24854087 NCBI chrNW_004955406:36,732,135...36,791,756 JBrowse link
G Rbx1 ring-box 1 ISO (MGI:MGI:4821082|PMID:12140560)
(PMID:15103331)
UniProtKB PMID:12140560, PMID:15103331 MGI:MGI:4821082 NCBI chrNW_004955413:26,579,759...26,592,980 JBrowse link
G Skp1 S-phase kinase associated protein 1 ISO (MGI:MGI:4821082|PMID:12140560)
(PMID:15103331), (PMID:20347421)
UniProtKB PMID:12140560, PMID:15103331, PMID:20347421 MGI:MGI:4821082 NCBI chrNW_004955408:5,393,851...5,412,644 JBrowse link
G Wwtr1 WW domain containing transcription regulator 1 ISO (MGI:MGI:3758168|PMID:17636028) MGI PMID:17636028 MGI:MGI:3758168 NCBI chrNW_004955448:745,419...868,313 JBrowse link
transcription factor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Taf1 TATA-box binding protein associated factor 1 ISO (PMID:20181722) ParkinsonsUK-UCL PMID:20181722 NCBI chrNW_004955475:10,930,175...11,006,876 JBrowse link
ubiquitin-dependent ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amfr autocrine motility factor receptor ISO (PMID:11724934), (PMID:17872946)
(PMID:16168377)
UniProtKB PMID:11724934, PMID:16168377, PMID:17872946 NCBI chrNW_004955433:14,172,871...14,205,484 JBrowse link
G Aup1 AUP1 lipid droplet regulating VLDL assembly factor ISO (PMID:23223569) UniProt PMID:23223569 NCBI chrNW_004955424:11,259,288...11,262,413 JBrowse link
G Bag6 BAG cochaperone 6 ISO (PMID:23129660), (PMID:24981174)
(PMID:26565908)
UniProtKB PMID:23129660, PMID:24981174, PMID:26565908 NCBI chrNW_004955437:176,848...188,243 JBrowse link
G Ccdc47 coiled-coil domain containing 47 ISO (MGI:MGI:5605216|PMID:25009997) MGI PMID:25009997 MGI:MGI:5605216 NCBI chrNW_004955478:8,053,057...8,074,530 JBrowse link
G Derl1 derlin 1 ISO (PMID:18555783)
(PMID:15215856), (PMID:17872946)
ParkinsonsUK-UCL
UniProtKB
PMID:15215856, PMID:17872946, PMID:18555783 NCBI chrNW_004955540:1,918,230...1,944,186 JBrowse link
G Derl2 derlin 2 ISO (PMID:16449189) UniProtKB PMID:16449189 NCBI chrNW_004955467:10,824,922...10,837,408 JBrowse link
G Derl3 derlin 3 ISO (PMID:22607976) UniProtKB PMID:22607976 NCBI chrNW_004955455:8,415,868...8,418,753 JBrowse link
G Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 ISO (PMID:15936278) BHF-UCL PMID:15936278 NCBI chrNW_004955453:14,147,286...14,154,396 JBrowse link
G Dnajb9 DnaJ heat shock protein family (Hsp40) member B9 ISO (PMID:18400946)
(MGI:MGI:5499714|PMID:22267725)
UniProtKB PMID:18400946, PMID:22267725 MGI:MGI:5499714 NCBI chrNW_004955410:12,814,993...12,820,852 JBrowse link
G Dnajc10 DnaJ heat shock protein family (Hsp40) member C10 ISO (PMID:18400946)
(MGI:MGI:4943381|PMID:18653895), (MGI:MGI:4947480|PMID:21329881)
UniProtKB PMID:18400946, PMID:18653895, PMID:21329881 MGI:MGI:4943381, MGI:MGI:4947480 NCBI chrNW_004955403:14,681,015...14,717,060 JBrowse link
G Ecpas Ecm29 proteasome adaptor and scaffold ISO (PMID:15496406) UniProtKB PMID:15496406 NCBI chrNW_004955419:15,775,208...15,886,101 JBrowse link
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 ISO (MGI:MGI:2178766|PMID:11375934) MGI PMID:11375934 MGI:MGI:2178766 NCBI chrNW_004955421:8,196,631...8,225,561 JBrowse link
G Erlec1 endoplasmic reticulum lectin 1 ISO (PMID:18502753) UniProtKB PMID:18502753 NCBI chrNW_004955441:19,535,425...19,557,960 JBrowse link
G Erlin1 ER lipid raft associated 1 ISO (PMID:19240031) UniProtKB PMID:19240031 NCBI chrNW_004955507:6,029,247...6,062,946 JBrowse link
G Erlin2 ER lipid raft associated 2 ISO (PMID:19240031) UniProtKB PMID:19240031 NCBI chrNW_004955463:13,445,468...13,460,370 JBrowse link
G Faf2 Fas associated factor family member 2 ISO (PMID:24215460) UniProtKB PMID:24215460 NCBI chrNW_004955408:28,737,597...28,797,143 JBrowse link
G Fbxo2 F-box protein 2 ISO (MGI:MGI:3573989|PMID:15723043) MGI PMID:15723043 MGI:MGI:3573989 NCBI chrNW_004955486:2,212,001...2,217,260 JBrowse link
G Fbxo6 F-box protein 6 ISO (MGI:MGI:2679753|PMID:12939278) UniProtKB PMID:12939278 MGI:MGI:2679753 NCBI chrNW_004955486:2,197,296...2,205,947 JBrowse link
G Foxred2 FAD dependent oxidoreductase domain containing 2 ISO (PMID:19706418) UniProtKB PMID:19706418 NCBI chrNW_004955413:23,070,715...23,091,402 JBrowse link
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 ISO (PMID:28827405) UniProt PMID:28827405 NCBI chrNW_004955433:14,609,275...14,621,774 JBrowse link
G Hsp90b1 heat shock protein 90 beta family member 1 ISO (PMID:18264092) UniProtKB PMID:18264092 NCBI chrNW_004955405:38,629,691...38,645,202 JBrowse link
G Jkamp JNK1/MAPK8 associated membrane protein ISO (PMID:19269966) UniProtKB PMID:19269966 NCBI chrNW_004955466:13,205,424...13,225,573 JBrowse link
G Man1b1 mannosidase alpha class 1B member 1 ISO (MGI:MGI:3054306|PMID:15294975)
(PMID:18003979)
MGI
UniProtKB
PMID:15294975, PMID:18003979 MGI:MGI:3054306 NCBI chrNW_004955513:5,109,651...5,122,568 JBrowse link
G Os9 OS9 endoplasmic reticulum lectin ISO (PMID:18264092), (PMID:18417469), (PMID:19346256) UniProtKB PMID:18264092, PMID:18417469, PMID:19346256 NCBI chrNW_004955458:5,407,709...5,432,646 JBrowse link
G Rnf103 ring finger protein 103 ISO (PMID:18675248) UniProtKB PMID:18675248 NCBI chrNW_004955424:1,097,981...1,161,267 JBrowse link
G Rnf185 ring finger protein 185 ISO (PMID:24019521) ParkinsonsUK-UCL PMID:24019521 NCBI chrNW_004955455:5,351,530...5,394,615 JBrowse link
G Rnf5 ring finger protein 5 ISO (PMID:24019521) ParkinsonsUK-UCL PMID:24019521 NCBI chrNW_004955437:643,133...645,528 JBrowse link
G Sec61b SEC61 translocon beta subunit ISO (PMID:8945469) UniProtKB PMID:8945469 NCBI chrNW_004955419:26,414,891...26,423,260 JBrowse link
G Selenos selenoprotein S ISO (PMID:15215856) UniProtKB PMID:15215856 NCBI chrNW_004955416:28,152,984...28,162,173 JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat containing alpha ISO (PMID:23129660) UniProtKB PMID:23129660 NCBI chrNW_004955495:5,025,038...5,051,810 JBrowse link
G Stt3b STT3 oligosaccharyltransferase complex catalytic subunit B ISO (PMID:22607976) UniProtKB PMID:22607976 NCBI chrNW_004955430:22,986,673...23,070,923 JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 ISO (PMID:23990462) ParkinsonsUK-UCL PMID:23990462 NCBI chrNW_004955442:16,521,130...16,523,733 JBrowse link
G Syvn1 synoviolin 1 ISO (PMID:12459480), (PMID:14593114), (PMID:17059562)
(PMID:21245296), (PMID:22607976), (PMID:28827405)
UniProtKB
UniProt
PMID:12459480, PMID:14593114, PMID:17059562, PMID:21245296, PMID:22607976, PMID:28827405 NCBI chrNW_004955422:20,067,933...20,074,947 JBrowse link
G Tmem129 transmembrane protein 129, E3 ubiquitin ligase ISO (PMID:24807418) ParkinsonsUK-UCL PMID:24807418 NCBI chrNW_004955514:968,763...972,918 JBrowse link
G Tmem67 transmembrane protein 67 ISO (PMID:19815549) UniProtKB PMID:19815549 NCBI chrNW_004955417:10,097,488...10,137,959 JBrowse link
G Tmub1 transmembrane and ubiquitin like domain containing 1 ISO (PMID:21343306) UniProtKB PMID:21343306 NCBI chrNW_004955491:5,518,199...5,520,743 JBrowse link
G Trim13 tripartite motif containing 13 ISO (PMID:17314412) UniProtKB PMID:17314412 NCBI chrNW_004955431:3,324,331...3,395,724 JBrowse link
G Trim25 tripartite motif containing 25 ISO (PMID:24810856) ParkinsonsUK-UCL PMID:24810856 NCBI chrNW_004955451:5,918,287...5,934,252 JBrowse link
G Ube2g2 ubiquitin conjugating enzyme E2 G2 ISO (MGI:MGI:2154298|PMID:11278356)
(PMID:22607976)
MGI
UniProtKB
PMID:11278356, PMID:22607976 MGI:MGI:2154298 NCBI chrNW_004955407:41,683,771...41,724,014 JBrowse link
G Ube2j1 ubiquitin conjugating enzyme E2 J1 ISO (PMID:21245296), (PMID:22607976)
(MGI:MGI:5532755|PMID:24020373)
UniProtKB
MGI
PMID:21245296, PMID:22607976, PMID:24020373 MGI:MGI:5532755 NCBI chrNW_004955411:16,076,647...16,091,554 JBrowse link
G Ube2j2 ubiquitin conjugating enzyme E2 J2 ISO (PMID:24807418) ParkinsonsUK-UCL PMID:24807418 NCBI chrNW_004955486:9,519,467...9,539,666 JBrowse link
G Ubqln1 ubiquilin 1 ISO (PMID:19822669) UniProtKB PMID:19822669 NCBI chrNW_004955432:3,575,034...3,617,029 JBrowse link
G Ubqln2 ubiquilin 2 ISO (PMID:24215460) UniProtKB PMID:24215460 NCBI chrNW_004955475:3,260,209...3,263,586 JBrowse link
G Ubxn4 UBX domain protein 4 ISO (PMID:19822669) UniProtKB PMID:19822669 NCBI chrNW_004955440:3,106,055...3,143,214 JBrowse link
G Ubxn8 UBX domain protein 8 ISO (PMID:21949850) UniProtKB PMID:21949850 NCBI chrNW_004955463:7,189,822...7,213,083 JBrowse link
G Umod uromodulin ISO (MGI:MGI:5916257|PMID:28437467) MGI PMID:28437467 MGI:MGI:5916257 NCBI chrNW_004955442:3,986,936...4,001,155 JBrowse link
G Usp19 ubiquitin specific peptidase 19 ISO (PMID:19465887) UniProtKB PMID:19465887 NCBI chrNW_004955532:1,104,212...1,115,267 JBrowse link
G Vcp valosin containing protein ISO (PMID:22607976)
(PMID:17872946)
UniProtKB PMID:17872946, PMID:22607976 NCBI chrNW_004955472:1,111,649...1,124,076 JBrowse link
G Wfs1 wolframin ER transmembrane glycoprotein ISO (MGI:MGI:5009360|PMID:20160352)
(PMID:20160352)
ParkinsonsUK-UCL PMID:20160352 MGI:MGI:5009360 NCBI chrNW_004955514:3,902,508...3,924,281 JBrowse link
ubiquitin-dependent glycoprotein ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 ISO (PMID:21062743), (PMID:25092655) ParkinsonsUK-UCL PMID:21062743, PMID:25092655 NCBI chrNW_004955421:8,196,631...8,225,561 JBrowse link
G Edem2 ER degradation enhancing alpha-mannosidase like protein 2 ISO (PMID:15537790) ParkinsonsUK-UCL PMID:15537790 NCBI chrNW_004955422:26,243,034...26,271,849 JBrowse link
ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amfr autocrine motility factor receptor ISO (PMID:16168377), (PMID:17043353) UniProtKB PMID:16168377, PMID:17043353 NCBI chrNW_004955433:14,172,871...14,205,484 JBrowse link
G Arel1 apoptosis resistant E3 ubiquitin protein ligase 1 ISO (PMID:23479728)
(MGI:MGI:5498443|PMID:23479728)
UniProtKB
CACAO
PMID:23479728 MGI:MGI:5498443 NCBI chrNW_004955523:818,535...874,189 JBrowse link
G Arih1 ariadne RBR E3 ubiquitin protein ligase 1 ISO (MGI:MGI:1340728|PMID:10431818) MGI PMID:10431818 MGI:MGI:1340728 NCBI chrNW_004955450:4,683,118...4,737,793 JBrowse link
G Arih2 ariadne RBR E3 ubiquitin protein ligase 2 ISO (PMID:16118314)
(MGI:MGI:1340728|PMID:10431818)
UniProtKB
MGI
PMID:10431818, PMID:16118314 MGI:MGI:1340728 NCBI chrNW_004955532:933,749...1,008,619 JBrowse link
G Arrb1 arrestin beta 1 ISO (MGI:MGI:5916812|PMID:23886940)
(PMID:23886940)
UniProtKB PMID:23886940 MGI:MGI:5916812 NCBI chrNW_004955414:16,478,843...16,568,050 JBrowse link
G Arrdc1 arrestin domain containing 1 NOT ISO (PMID:23886940)
(PMID:27462458)
UniProtKB PMID:23886940, PMID:27462458 NCBI chrNW_004955513:5,479,468...5,486,489 JBrowse link
G Arrdc4 arrestin domain containing 4 NOT ISO (MGI:MGI:5804712|PMID:27462458) UniProtKB PMID:27462458 MGI:MGI:5804712 NCBI chrNW_004955416:25,573,265...25,583,928 JBrowse link
G Asb2 ankyrin repeat and SOCS box containing 2 ISO (MGI:MGI:4830849|PMID:19300455) MGI PMID:19300455 MGI:MGI:4830849 NCBI chrNW_004955438:16,005,570...16,041,668 JBrowse link
G Atxn3 ataxin 3 ISO (MGI:MGI:3833207|PMID:17764659) MGI PMID:17764659 MGI:MGI:3833207 NCBI chrNW_004955438:14,405,415...14,443,457 JBrowse link
G Bag6 BAG cochaperone 6 ISO (MGI:MGI:4887294|PMID:20713601) UniProtKB PMID:20713601 MGI:MGI:4887294 NCBI chrNW_004955437:176,848...188,243 JBrowse link
G Bfar bifunctional apoptosis regulator ISO (PMID:21068390) ParkinsonsUK-UCL PMID:21068390 NCBI chrNW_004955442:4,229,236...4,255,623 JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase ISO (PMID:15448698) UniProtKB PMID:15448698 NCBI chrNW_004955485:8,724,375...8,846,647 JBrowse link
G Cbl Cbl proto-oncogene ISO (PMID:25178484) UniProtKB PMID:25178484 NCBI chrNW_004955412:20,307,011...20,388,539 JBrowse link
G Cblc Cbl proto-oncogene C ISO (PMID:14661060) BHF-UCL PMID:14661060 NCBI chrNW_004955555:1,921,896...1,941,247 JBrowse link
G Chfr checkpoint with forkhead and ring finger domains ISO (MGI:MGI:3575445|PMID:15793587) MGI PMID:15793587 MGI:MGI:3575445 NCBI chrNW_004955482:233,485...267,064 JBrowse link
G Cnot4 CCR4-NOT transcription complex subunit 4 ISO (PMID:26575292) UniProtKB PMID:26575292 NCBI chrNW_004955494:7,190,361...7,306,298 JBrowse link
G Cul3 cullin 3 ISO (PMID:25401743), (PMID:27561354) MGI PMID:25401743, PMID:27561354 NCBI chrNW_004955453:9,546,554...9,629,976 JBrowse link
G Cul4a cullin 4A ISO (MGI:MGI:3850765|PMID:19481525) MGI PMID:19481525 MGI:MGI:3850765 NCBI chrNW_004955404:583,261...617,914 JBrowse link
G Dcst1 DC-STAMP domain containing 1 ISO (PMID:27782195) UniProtKB PMID:27782195 NCBI chrNW_004955545:1,529,926...1,545,459 JBrowse link
G Ddb1 damage specific DNA binding protein 1 ISO (PMID:11673459)
(MGI:MGI:5908518|PMID:26431207)
(PMID:26431207)
UniProtKB
UniProt
PMID:11673459, PMID:26431207 MGI:MGI:5908518 NCBI chrNW_004955511:6,209,777...6,233,594 JBrowse link
G Dtl denticleless E3 ubiquitin protein ligase homolog ISO (PMID:26431207)
(PMID:18794347)
UniProt
UniProtKB
PMID:18794347, PMID:26431207 NCBI chrNW_004955406:5,256,057...5,299,573 JBrowse link
G Dtx3l deltex E3 ubiquitin ligase 3L ISO (PMID:26479788) UniProtKB PMID:26479788 NCBI chrNW_004955427:21,806,170...21,812,701 JBrowse link
G Fbxl12 F-box and leucine rich repeat protein 12 ISO (MGI:MGI:1346854|PMID:10531037) MGI PMID:10531037 MGI:MGI:1346854 NCBI chrNW_004955495:1,232,028...1,242,673 JBrowse link
G Fbxl14 F-box and leucine rich repeat protein 14 ISO (PMID:19955572) UniProtKB PMID:19955572 NCBI chrNW_004955454:4,133,718...4,137,363 JBrowse link
G Fbxl2 F-box and leucine rich repeat protein 2 ISO (MGI:MGI:5009099|PMID:21343341) MGI PMID:21343341 MGI:MGI:5009099 NCBI chrNW_004955421:512,197...617,524 JBrowse link
G Fbxo10 F-box protein 10 ISO (PMID:23431138) UniProtKB PMID:23431138 NCBI chrNW_004955419:28,915,083...28,969,374 JBrowse link
G Fbxo2 F-box protein 2 ISO (MGI:MGI:3573989|PMID:15723043) MGI PMID:15723043 MGI:MGI:3573989 NCBI chrNW_004955486:2,212,001...2,217,260 JBrowse link
G Fbxo4 F-box protein 4 ISO (PMID:16275645) UniProtKB PMID:16275645 NCBI chrNW_004955426:26,046,742...26,066,747 JBrowse link
G Fbxo45 F-box protein 45 ISO (PMID:19581926) UniProtKB PMID:19581926 NCBI chrNW_004955420:12,714,749...12,727,600 JBrowse link
G Fbxo7 F-box protein 7 ISO (PMID:25029497) ParkinsonsUK-UCL PMID:25029497 NCBI chrNW_004955405:41,429,421...41,449,670 JBrowse link
G Fbxo8 F-box protein 8 ISO (MGI:MGI:1346854|PMID:10531037) MGI PMID:10531037 MGI:MGI:1346854 NCBI chrNW_004955403:32,798,827...32,845,684 JBrowse link
G Hace1 HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 ISO (PMID:22036506) UniProtKB PMID:22036506 NCBI chrNW_004955411:30,178,297...30,260,627 JBrowse link
G Hdac6 histone deacetylase 6 ISO (MGI:MGI:3653156|PMID:16810319) MGI PMID:16810319 MGI:MGI:3653156 NCBI chrNW_004955543:348,314...378,391 JBrowse link
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 ISO (MGI:MGI:5295927|PMID:21600962) MGI PMID:21600962 MGI:MGI:5295927 NCBI chrNW_004955433:14,609,275...14,621,774 JBrowse link
G Itch itchy E3 ubiquitin protein ligase ISO (MGI:MGI:3038342|PMID:14973438), (MGI:MGI:3614328|PMID:15678106)
(PMID:25518932)
(PMID:15678106)
MGI
CACAO
PMID:14973438, PMID:15678106, PMID:25518932 MGI:MGI:3038342, MGI:MGI:3614328 NCBI chrNW_004955422:26,810,829...26,918,517 JBrowse link
G Kctd10 potassium channel tetramerization domain containing 10 ISO (PMID:25401743) MGI PMID:25401743 NCBI chrNW_004955455:9,032,697...9,064,827 JBrowse link
G Kctd21 potassium channel tetramerization domain containing 21 ISO (PMID:21472142) UniProtKB PMID:21472142 NCBI chrNW_004955414:13,779,193...13,798,349 JBrowse link
G Kctd6 potassium channel tetramerization domain containing 6 ISO (PMID:21472142) UniProtKB PMID:21472142 NCBI chrNW_004955430:1,667,385...1,670,203 JBrowse link
G Keap1 kelch like ECH associated protein 1 ISO (PMID:15601839)
(MGI:MGI:6368080|PMID:15282312), (MGI:MGI:6368086|PMID:15367669)
UniProt PMID:15282312, PMID:15367669, PMID:15601839 MGI:MGI:6368080, MGI:MGI:6368086 NCBI chrNW_004955495:1,704,695...1,711,339 JBrowse link
G Klhl15 kelch like family member 15 ISO (PMID:27561354) UniProtKB PMID:27561354 NCBI chrNW_004955509:4,377,975...4,439,287 JBrowse link
G Klhl25 kelch like family member 25 ISO (PMID:22578813) UniProtKB PMID:22578813 NCBI chrNW_004955416:18,965,966...18,991,099 JBrowse link
G Klhl3 kelch like family member 3 ISO (PMID:23453970), (PMID:23576762) UniProtKB PMID:23453970, PMID:23576762 NCBI chrNW_004955408:32,596,497...32,719,967 JBrowse link
G Klhl8 kelch like family member 8 ISO (PMID:19158078) UniProtKB PMID:19158078 NCBI chrNW_004955474:2,652,992...2,710,616 JBrowse link
G Lnx1 ligand of numb-protein X 1 ISO (MGI:MGI:2157170|PMID:11782429) MGI PMID:11782429 MGI:MGI:2157170 NCBI chrNW_004955447:17,154,026...17,265,067 JBrowse link
G Map3k1 mitogen-activated protein kinase kinase kinase 1 ISO RGD PMID:12049732 RGD:729224 NCBI chrNW_004955446:11,022,091...11,090,136 JBrowse link
G Mdm2 MDM2 proto-oncogene ISO (PMID:16479015), (PMID:18560357), (PMID:24506068)
(PMID:17237821)
(MGI:MGI:2384368|PMID:12145204), (MGI:MGI:3720993|PMID:17591690)
(MGI:MGI:5643999|PMID:25720496)
(PMID:11278372), (PMID:15314173), (PMID:16173922), (PMID:17310983)
UniProt
ParkinsonsUK-UCL
MGI
CACAO
CAFA
PMID:11278372, PMID:12145204, PMID:15314173, PMID:16173922, PMID:16479015, PMID:17237821, PMID:17310983, PMID:17591690, PMID:18560357, PMID:24506068, PMID:25720496 MGI:MGI:2384368, MGI:MGI:3720993, MGI:MGI:5643999 NCBI chrNW_004955458:15,264,028...15,287,290 JBrowse link
G Mib1 mindbomb E3 ubiquitin protein ligase 1 ISO (PMID:23615451) CACAO PMID:23615451 NCBI chrNW_004955402:10,392,308...10,502,576 JBrowse link
G Mylip myosin regulatory light chain interacting protein ISO (MGI:MGI:3849777|PMID:19520913) BHF-UCL PMID:19520913 MGI:MGI:3849777 NCBI chrNW_004955483:9,725,343...9,745,041 JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase ISO (PMID:20086093), (PMID:26263374)
(MGI:MGI:3828188|PMID:18931680)
(PMID:17218260), (PMID:17996703)
BHF-UCL
MGI
PMID:17218260, PMID:17996703, PMID:18931680, PMID:20086093, PMID:26263374 MGI:MGI:3828188 NCBI chrNW_004955409:183,645...281,252 JBrowse link
G Nedd4l NEDD4 like E3 ubiquitin protein ligase ISO (PMID:21463633) BHF-UCL PMID:21463633 NCBI chrNW_004955402:42,339,380...42,688,661 JBrowse link
G Nploc4 NPL4 homolog, ubiquitin recognition factor ISO (PMID:26471729) UniProtKB PMID:26471729 NCBI chrNW_004955506:1,451,337...1,513,455 JBrowse link
G Ntan1 N-terminal asparagine amidase ISO (PMID:21375249) UniProtKB PMID:21375249 NCBI chrNW_004955442:169,814...186,253 JBrowse link
G Nub1 negative regulator of ubiquitin like proteins 1 ISO (PMID:16707496) UniProtKB PMID:16707496 NCBI chrNW_004955491:5,709,791...5,737,620 JBrowse link
G Os9 OS9 endoplasmic reticulum lectin ISO (PMID:19084021) UniProtKB PMID:19084021 NCBI chrNW_004955458:5,407,709...5,432,646 JBrowse link
G Ppp1r11 protein phosphatase 1 regulatory inhibitor subunit 11 ISO (MGI:MGI:6094454|PMID:27805901)
(PMID:27805901)
UniProtKB PMID:27805901 MGI:MGI:6094454 NCBI chrNW_004955583:198,233...201,312 JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase ISO (PMID:12925569), (PMID:17097639) UniProtKB PMID:12925569, PMID:17097639 NCBI chrNW_004955439:18,664,230...19,953,358 JBrowse link
G Psmc2 proteasome 26S subunit, ATPase 2 ISO (PMID:9295362) UniProtKB PMID:9295362 NCBI chrNW_004955410:8,341,218...8,355,515 JBrowse link
G Psmd11 proteasome 26S subunit, non-ATPase 11 ISO (PMID:22972301) UniProtKB PMID:22972301 NCBI chrNW_004955481:7,364,543...7,402,770 JBrowse link
G Psmf1 proteasome inhibitor subunit 1 ISO (PMID:10764772) UniProtKB PMID:10764772 NCBI chrNW_004955596:381,080...414,307 JBrowse link
G Rbbp6 RB binding protein 6, ubiquitin ligase ISO (PMID:24726359)
(PMID:18851979)
(MGI:MGI:5688821|PMID:24726359)
UniProtKB PMID:18851979, PMID:24726359 MGI:MGI:5688821 NCBI chrNW_004955493:3,003,522...3,034,638 JBrowse link
G Rchy1 ring finger and CHY zinc finger domain containing 1 ISO (PMID:19483087) UniProtKB PMID:19483087 NCBI chrNW_004955474:1,463,817...1,475,677 JBrowse link
G Rffl ring finger and FYVE like domain containing E3 ubiquitin protein ligase ISO (PMID:18450452), (PMID:22609986)
(PMID:15069192)
UniProtKB PMID:15069192, PMID:18450452, PMID:22609986 NCBI chrNW_004955481:9,718,369...9,788,048 JBrowse link
G Rlim ring finger protein, LIM domain interacting ISO (MGI:MGI:4456957|PMID:11882901) UniProtKB PMID:11882901 MGI:MGI:4456957 NCBI chrNW_004955562:508,723...531,699 JBrowse link
G Rnf11 ring finger protein 11 ISO (PMID:14755250)
(MGI:MGI:1927025|PMID:11042109)
UniProtKB
MGI
PMID:11042109, PMID:14755250 MGI:MGI:1927025 NCBI chrNW_004955464:7,745,835...7,787,347 JBrowse link
G Rnf125 ring finger protein 125 ISO (PMID:17460044), (PMID:26471729) UniProtKB PMID:17460044, PMID:26471729 NCBI chrNW_004955402:19,276,157...19,310,605 JBrowse link
G Rnf126 ring finger protein 126 ISO (PMID:24981174)
(PMID:23026136)
UniProtKB PMID:23026136, PMID:24981174 NCBI chrNW_004955495:7,083,952...7,098,442 JBrowse link
G Rnf144b ring finger protein 144B ISO (PMID:12853982) UniProtKB PMID:12853982 NCBI chrNW_004955483:7,784,522...7,862,917 JBrowse link
G Rnf146 ring finger protein 146 ISO (PMID:21478859) UniProtKB PMID:21478859 NCBI chrNW_004955436:8,312,096...8,331,648 JBrowse link
G Rnf168 ring finger protein 168 ISO (PMID:22373579) UniProtKB PMID:22373579 NCBI chrNW_004955420:12,656,815...12,676,836 JBrowse link
G Rnf20 ring finger protein 20 ISO (PMID:19037095) UniProtKB PMID:19037095 NCBI chrNW_004955419:24,273,714...24,299,454 JBrowse link
G Rnf213 ring finger protein 213 ISO (PMID:26766444) UniProtKB PMID:26766444 NCBI chrNW_004955506:2,498,339...2,598,363 JBrowse link
G Rnf34 ring finger protein 34 ISO (PMID:22064484)
(MGI:MGI:5582154|PMID:22064484)
UniProtKB PMID:22064484 MGI:MGI:5582154 NCBI chrNW_004955482:6,889,112...6,905,139 JBrowse link
G Rnf40 ring finger protein 40 ISO RGD PMID:12121982 RGD:633892 NCBI chrNW_004955493:7,627,189...7,640,711 JBrowse link
G Rnf43 ring finger protein 43 ISO (PMID:22895187) UniProtKB PMID:22895187 NCBI chrNW_004955451:4,604,985...4,680,762 JBrowse link
G Rnf6 ring finger protein 6 ISO (MGI:MGI:3603857|PMID:16204183) MGI PMID:16204183 MGI:MGI:3603857 NCBI chrNW_004955497:5,744,485...5,754,728 JBrowse link
G Rnf8 ring finger protein 8 ISO (PMID:22266820), (PMID:22373579) UniProtKB PMID:22266820, PMID:22373579 NCBI chrNW_004955437:5,807,592...5,832,213