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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular protein catabolic process
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Accession:GO:0044257 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of a protein by individual cells.
Synonyms:exact_synonym: cellular protein breakdown;   cellular protein catabolism;   cellular protein degradation


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cellular protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chek2 checkpoint kinase 2 involved_in ISO (PMID:11298456) RGD PMID:11298456 NCBI chr12:45,788,823...45,821,382
Ensembl chr12:45,788,827...45,821,286
JBrowse link
G Cln8 CLN8, transmembrane ER and ERGIC protein acts_upstream_of_or_within ISO MGI:1856959 (MGI:53233|PMID:8389815) RGD PMID:8389815 MGI:53233 NCBI chr16:74,749,662...74,759,553
Ensembl chr16:74,749,662...74,759,774
JBrowse link
G Dab2ip DAB2 interacting protein involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:17389591)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:17389591 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:18,915,290...19,086,282
Ensembl chr 3:18,915,290...19,086,280
JBrowse link
G Dennd3 DENN domain containing 3 involved_in ISO (MGI:5448516|PMID:21718402) RGD PMID:21718402 MGI:5448516 NCBI chr 7:105,415,870...105,473,583
Ensembl chr 7:105,415,677...105,473,592
JBrowse link
G Htra2 HtrA serine peptidase 2 involved_in ISO (PMID:17297443) RGD PMID:17297443 NCBI chr 4:115,556,914...115,560,202
Ensembl chr 4:115,556,916...115,560,095
JBrowse link
G Ide insulin degrading enzyme involved_in IDA
ISO
degradation of oxidized proteins in liver peroxisomes
(PMID:20364150)
RGD PMID:20364150 PMID:11235899 RGD:1627575 NCBI chr 1:235,002,984...235,102,448
Ensembl chr 1:234,995,351...235,102,440
JBrowse link
G Magec2 MAGE family member C2 involved_in ISO (PMID:20864041) RGD PMID:20864041 NCBI chr  X:140,610,610...140,615,484
Ensembl chr  X:140,606,825...140,615,471
JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 acts_upstream_of_or_within ISO MGI:2176390 (MGI:3612221|PMID:16368712) RGD PMID:16368712 MGI:3612221 NCBI chr 5:135,121,176...135,141,076
Ensembl chr 5:135,121,163...135,142,048
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO (PMID:21376232)
(MGI:4948386|PMID:21376232)
RGD PMID:21376232 MGI:4948386 NCBI chr 1:48,688,651...49,882,520 JBrowse link
G Rab12 RAB12, member RAS oncogene family involved_in ISS
ISO
GO_REF:0000024
(MGI:5448516|PMID:21718402)
UniProt
RGD
PMID:21718402 GO_REF:0000024 MGI:5448516 NCBI chr 9:106,480,301...106,506,895
Ensembl chr 9:106,480,301...106,506,910
JBrowse link
G Ripk1 receptor interacting serine/threonine kinase 1 involved_in ISO (PMID:17389591) RGD PMID:17389591 NCBI chr17:30,839,639...30,871,824
Ensembl chr17:30,839,650...30,871,824
JBrowse link
G Rnf5 ring finger protein 5 involved_in ISO (PMID:19285439) RGD PMID:19285439 NCBI chr20:4,145,539...4,147,985
Ensembl chr20:4,145,507...4,147,985
JBrowse link
G Siah2 siah E3 ubiquitin protein ligase 2 acts_upstream_of_or_within ISO UniProtKB:P25054|UniProtKB:P41221 (PMID:12952940) RGD PMID:12952940 NCBI chr 2:142,913,924...142,931,752
Ensembl chr 2:142,914,003...142,931,950
JBrowse link
G Ube2g1 ubiquitin-conjugating enzyme E2G 1 acts_upstream_of_or_within ISO (PMID:21628527) RGD PMID:21628527 NCBI chr10:57,225,963...57,306,748
Ensembl chr10:57,225,952...57,308,568
JBrowse link
G Ube2g2 ubiquitin-conjugating enzyme E2G 2 acts_upstream_of_or_within ISO (PMID:21628527) RGD PMID:21628527 NCBI chr20:10,983,734...11,005,468
Ensembl chr20:10,983,742...11,005,447
JBrowse link
G Ube4b ubiquitination factor E4B acts_upstream_of_or_within ISO MGI:3611069 (MGI:3610695|PMID:16314518) RGD PMID:16314518 MGI:3610695 NCBI chr 5:159,766,829...159,870,509
Ensembl chr 5:159,766,829...159,870,509
JBrowse link
acrosome matrix dispersal term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acr acrosin IMP RGD PMID:28859281 RGD:13464336 NCBI chr 7:120,636,581...120,644,474
Ensembl chr 7:120,638,321...120,644,474
JBrowse link
anaphase-promoting complex-dependent catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anapc1 anaphase promoting complex subunit 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:115,850,117...115,930,259
Ensembl chr 3:115,850,185...115,930,273
JBrowse link
G Anapc10 anaphase promoting complex subunit 10 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr19:28,152,299...28,205,552
Ensembl chr19:28,152,299...28,205,467
JBrowse link
G Anapc11 anaphase promoting complex subunit 11 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:105,875,209...105,886,307 JBrowse link
G Anapc4 anaphase promoting complex subunit 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:58,125,995...58,159,253
Ensembl chr14:58,125,995...58,157,770
JBrowse link
G Anapc5 anaphase-promoting complex subunit 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:33,748,714...33,781,709
Ensembl chr12:33,748,735...33,781,781
JBrowse link
G Anapc7 anaphase promoting complex subunit 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:34,131,214...34,160,819
Ensembl chr12:34,133,429...34,160,005
JBrowse link
G Cdc16 cell division cycle 16 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,773,026...75,796,586
Ensembl chr16:75,773,028...75,796,550
JBrowse link
G Cdc20 cell division cycle 20 involved_in ISO
IBA
(PMID:17443180)
PMID:21873635
(PMID:18753608)
RGD PMID:17443180 PMID:18753608 PMID:21873635 RGD:13792537 NCBI chr 5:131,966,203...131,970,406
Ensembl chr 5:131,966,215...131,970,512
JBrowse link
G Cdc23 cell division cycle 23 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:26,236,891...26,260,611
Ensembl chr18:26,236,890...26,291,163
JBrowse link
G Cdc26 cell division cycle 26 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 5:75,844,852...75,859,837 JBrowse link
G Cdc27 cell division cycle 27 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:89,400,931...89,449,823
Ensembl chr10:89,400,940...89,449,736
JBrowse link
G Cul3 cullin 3 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:10500095)
GO_REF:0000107
RGD
Ensembl
PMID:10500095 GO_REF:0000107 NCBI chr 9:81,592,641...81,670,428
Ensembl chr 9:81,592,641...81,670,462
JBrowse link
G Ecrg4 ECRG4 augurin precursor involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:4454240|PMID:20404145)
RGD PMID:20404145 PMID:21873635 MGI:4454240, RGD:13792537 NCBI chr 9:45,992,954...46,012,605
Ensembl chr 9:45,992,954...46,012,595
JBrowse link
G Fbxo31 F-box protein 31 involved_in ISS
ISO
GO_REF:0000024
(PMID:19412162)
UniProt
RGD
PMID:19412162 GO_REF:0000024 NCBI chr19:49,624,818...49,656,083
Ensembl chr19:49,627,686...49,656,010
JBrowse link
G Fzr1 fizzy and cell division cycle 20 related 1 involved_in ISO
IBA
(PMID:18662541), (PMID:21596315)
PMID:21873635
(PMID:18753608)
RGD PMID:18662541 PMID:18753608 PMID:21596315 PMID:21873635 RGD:13792537 NCBI chr 7:8,332,029...8,343,953
Ensembl chr 7:8,332,029...8,343,952
JBrowse link
G Ube2c ubiquitin-conjugating enzyme E2C involved_in IBA
ISO
PMID:21873635
(PMID:19822757), (PMID:9122200)
RGD PMID:9122200 PMID:19822757 PMID:21873635 RGD:13792537 NCBI chr 3:153,506,636...153,509,036
Ensembl chr 3:153,506,636...153,513,339
JBrowse link
G Ube2s ubiquitin-conjugating enzyme E2S involved_in ISS
ISO
GO_REF:0000024
(PMID:19820702), (PMID:19822757)
UniProt
RGD
PMID:19820702 PMID:19822757 GO_REF:0000024 NCBI chr 1:69,028,853...69,032,914
Ensembl chr 1:69,028,750...69,032,914
JBrowse link
cytoplasm protein quality control by the ubiquitin-proteasome system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rnf126 ring finger protein 126 involved_in ISO (PMID:24981174) RGD PMID:24981174 NCBI chr 7:9,939,359...9,946,963
Ensembl chr 7:9,938,229...9,946,738
JBrowse link
epidermal growth factor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rab7a RAB7A, member RAS oncogene family involved_in ISO (PMID:18272684)
(PMID:16282324)
RGD PMID:16282324 PMID:18272684 NCBI chr 4:120,461,966...120,510,756
Ensembl chr 4:120,461,963...120,506,889
JBrowse link
G Snx5 sorting nexin 5 IDA RGD PMID:16487940 RGD:13508623 NCBI chr 3:131,621,709...131,641,205
Ensembl chr 3:131,621,880...131,641,192
JBrowse link
ER-associated misfolded protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aup1 AUP1, lipid droplet regulating VLDL assembly factor involved_in ISO
ISS
(PMID:21857022)
GO_REF:0000024
RGD
UniProt
PMID:21857022 GO_REF:0000024 NCBI chr 4:115,560,274...115,563,346
Ensembl chr 4:115,560,261...115,563,346
JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISO
ISS
(PMID:23129660), (PMID:24981174)
GO_REF:0000024
RGD
UniProt
PMID:23129660 PMID:24981174 GO_REF:0000024 NCBI chr20:3,675,938...3,690,414
Ensembl chr20:3,675,938...3,688,657
JBrowse link
G Derl1 derlin 1 involved_in ISO (PMID:24089527) RGD PMID:24089527 NCBI chr 7:89,404,413...89,427,095
Ensembl chr 7:89,404,417...89,427,145
JBrowse link
G Ngly1 N-glycanase 1 IMP RGD PMID:32259258 RGD:39457703 NCBI chr15:9,153,738...9,210,228
Ensembl chr15:9,153,738...9,204,630
JBrowse link
G Rnf185 ring finger protein 185 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:78,292,517...78,329,832
Ensembl chr14:78,292,516...78,329,864
JBrowse link
G Rnf5 ring finger protein 5 involved_in ISO
IBA
(PMID:19269966)
PMID:21873635
RGD PMID:19269966 PMID:21873635 RGD:13792537 NCBI chr20:4,145,539...4,147,985
Ensembl chr20:4,145,507...4,147,985
JBrowse link
G Sdf2l1 stromal cell-derived factor 2-like 1 acts_upstream_of_or_within IMP PMID:23444373 MGI PMID:23444373 RGD:8554667 NCBI chr11:83,872,659...83,874,902
Ensembl chr11:83,872,659...83,874,902
JBrowse link
G Tor1a torsin family 1, member A involved_in ISS
ISO
GO_REF:0000024
(MGI:3712415|PMID:17200151)
UniProt
RGD
PMID:17200151 GO_REF:0000024 MGI:3712415 NCBI chr 3:14,250,667...14,257,704
Ensembl chr 3:14,250,676...14,257,691
JBrowse link
G Ufd1 ubiquitin recognition factor in ER associated degradation 1 involved_in IBA
ISO
PMID:21873635
(PMID:24089527)
RGD PMID:24089527 PMID:21873635 RGD:13792537 NCBI chr11:82,161,618...82,185,107
Ensembl chr11:82,161,619...82,185,087
JBrowse link
G Uggt1 UDP-glucose glycoprotein glucosyltransferase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:38,355,229...38,468,473
Ensembl chr 9:38,359,089...38,468,467
JBrowse link
G Vcp valosin-containing protein involved_in IBA
ISO
PMID:21873635
(PMID:24089527)
RGD PMID:24089527 PMID:21873635 RGD:13792537 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571
JBrowse link
ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Brsk2 BR serine/threonine kinase 2 involved_in ISO
IEA
(PMID:23907667)
GO_REF:0000107
RGD
Ensembl
PMID:23907667 GO_REF:0000107 NCBI chr 1:197,035,522...197,088,624
Ensembl chr 1:197,035,633...197,088,092
JBrowse link
G Ccdc47 coiled-coil domain containing 47 involved_in ISO
ISS
(PMID:25009997)
GO_REF:0000024
RGD
UniProt
PMID:25009997 GO_REF:0000024 NCBI chr10:91,130,303...91,148,829
Ensembl chr10:91,130,303...91,148,881
JBrowse link
G Derl1 derlin 1 involved_in ISO (PMID:25239945) RGD PMID:25239945 NCBI chr 7:89,404,413...89,427,095
Ensembl chr 7:89,404,417...89,427,145
JBrowse link
G Dnajb12 DnaJ heat shock protein family (Hsp40) member B12 involved_in ISO (PMID:21148293), (PMID:21150129) RGD PMID:21148293 PMID:21150129 NCBI chr20:27,828,216...27,846,428
Ensembl chr20:27,828,235...27,846,427
JBrowse link
G Rcn3 reticulocalbin 3 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:6201885|PMID:26252542)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:26252542 GO_REF:0000024 GO_REF:0000107 MGI:6201885 NCBI chr 1:95,564,503...95,573,762
Ensembl chr 1:95,564,380...95,573,725
JBrowse link
G Rhbdd1 rhomboid domain containing 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5437551|PMID:22795130)
UniProt
RGD
PMID:22795130 GO_REF:0000024 MGI:5437551 NCBI chr 9:83,630,037...83,748,690
Ensembl chr 9:83,630,063...83,748,689
JBrowse link
G Rnf139 ring finger protein 139 involved_in IBA
ISO
PMID:21873635
(PMID:25239945)
RGD PMID:25239945 PMID:21873635 RGD:13792537 NCBI chr 7:90,439,726...90,450,911
Ensembl chr 7:90,436,621...90,488,009
JBrowse link
G Rnf185 ring finger protein 185 involved_in ISO UniProtKB:Q99942 (PMID:24019521) RGD PMID:24019521 NCBI chr14:78,292,517...78,329,832
Ensembl chr14:78,292,516...78,329,864
JBrowse link
G Rnf5 ring finger protein 5 involved_in ISO (PMID:24019521) RGD PMID:24019521 NCBI chr20:4,145,539...4,147,985
Ensembl chr20:4,145,507...4,147,985
JBrowse link
G Sel1l SEL1L adaptor subunit of ERAD E3 ubiquitin ligase involved_in ISS
ISO
GO_REF:0000024
(MGI:5606246|PMID:25066055)
(PMID:21454652), (PMID:26471130)
UniProt
RGD
PMID:21454652 PMID:25066055 PMID:26471130 GO_REF:0000024 MGI:5606246 NCBI chr 6:110,735,450...110,779,695
Ensembl chr 6:110,735,450...110,779,648
JBrowse link
G Syvn1 synoviolin 1 involved_in ISO (PMID:22590560), (PMID:26471130)
(MGI:5645202|PMID:21454652)
RGD PMID:21454652 PMID:22590560 PMID:26471130 MGI:5645202 NCBI chr 1:203,339,235...203,346,137
Ensembl chr 1:203,339,619...203,346,152
JBrowse link
G Ubxn6 UBX domain protein 6 involved_in ISO (PMID:19275885) RGD PMID:19275885 NCBI chr 9:900,883...906,047
Ensembl chr 9:900,884...906,124
JBrowse link
G Vcp valosin-containing protein involved_in ISO
ISS
(PMID:20104022), (PMID:25088257)
GO_REF:0000024
RGD
UniProt
PMID:20104022 PMID:25088257 GO_REF:0000024 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571
JBrowse link
low-density lipoprotein particle receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcsk9 proprotein convertase subtilisin/kexin type 9 involved_in ISO
ISS
(PMID:16912035), (PMID:18197702)
PMID:12552133
GO_REF:0000024
RGD
UniProt
PMID:16912035 PMID:18197702 PMID:12552133 GO_REF:0000024, RGD:629554 NCBI chr 5:121,211,278...121,233,688
Ensembl chr 5:121,211,278...121,233,688
JBrowse link
lysosomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc115 coiled-coil domain containing 115 involved_in ISO (PMID:28296633) RGD PMID:28296633 NCBI chr 9:36,650,384...36,654,348
Ensembl chr 9:36,649,271...36,653,946
JBrowse link
G Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin involved_in ISO (MGI:1346962|PMID:10527801), (MGI:3757820|PMID:17855597) RGD PMID:10527801 PMID:17855597 MGI:1346962 MGI:3757820 NCBI chr 1:181,156,071...181,169,458
Ensembl chr 1:181,156,073...181,167,434
JBrowse link
G Dpp7 dipeptidylpeptidase 7 acts_upstream_of_or_within ISO (MGI:6101836|PMID:28728022) RGD PMID:28728022 MGI:6101836 NCBI chr 3:8,165,091...8,169,343
Ensembl chr 3:8,165,091...8,169,355
JBrowse link
G Grn granulin precursor acts_upstream_of_or_within ISO MGI:3762618 (MGI:6101836|PMID:28728022) RGD PMID:28728022 MGI:6101836 NCBI chr10:87,387,672...87,393,777
Ensembl chr10:87,387,638...87,393,775
JBrowse link
G Lamp2 lysosomal-associated membrane protein 2 involved_in ISO
ISS
(PMID:24880125)
GO_REF:0000024
RGD
UniProt
PMID:24880125 GO_REF:0000024 NCBI chr  X:117,173,097...117,222,090
Ensembl chr  X:117,057,606...117,260,522
JBrowse link
G Psap prosaposin acts_upstream_of_or_within ISO (MGI:2671637|PMID:12813057) RGD PMID:12813057 MGI:2671637 NCBI chr20:28,214,229...28,240,501
Ensembl chr20:28,214,271...28,240,498
JBrowse link
G Tmem106b transmembrane protein 106B acts_upstream_of_or_within ISO MGI:5319917 (MGI:6101836|PMID:28728022) RGD PMID:28728022 MGI:6101836 NCBI chr 4:41,328,125...41,347,315
Ensembl chr 4:41,327,994...41,345,619
JBrowse link
G Tmem199 transmembrane protein 199 involved_in ISS
ISO
GO_REF:0000024
(PMID:28296633)
UniProt
RGD
PMID:28296633 GO_REF:0000024 NCBI chr10:63,402,493...63,407,065
Ensembl chr10:63,402,494...63,407,108
JBrowse link
G Tpp1 tripeptidyl peptidase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:6101836|PMID:28728022)
Ensembl
RGD
PMID:28728022 GO_REF:0000107 MGI:6101836 NCBI chr 1:160,097,984...160,104,108
Ensembl chr 1:160,096,833...160,104,129
JBrowse link
G Vps13a vacuolar protein sorting 13 homolog A involved_in ISO (PMID:30709847) RGD PMID:30709847 NCBI chr 1:213,901,999...214,128,638
Ensembl chr 1:213,901,999...214,128,555
JBrowse link
maintenance of unfolded protein involved in ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag6 BAG cochaperone 6 involved_in ISO (PMID:21636303) RGD PMID:21636303 NCBI chr20:3,675,938...3,690,414
Ensembl chr20:3,675,938...3,688,657
JBrowse link
G Get4 guided entry of tail-anchored proteins factor 4 involved_in ISO (PMID:21636303) RGD PMID:21636303 NCBI chr12:15,377,009...15,394,238
Ensembl chr12:15,377,009...15,394,053
JBrowse link
G Usp13 ubiquitin specific peptidase 13 involved_in ISO (PMID:24424410) RGD PMID:24424410 NCBI chr 2:115,576,912...115,689,153
Ensembl chr 2:115,577,091...115,686,222
JBrowse link
mannose trimming involved in glycoprotein ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 involved_in ISO (PMID:25092655) RGD PMID:25092655 NCBI chr 4:141,797,631...141,829,717
Ensembl chr 4:141,797,701...141,829,717
JBrowse link
G Edem2 ER degradation enhancing alpha-mannosidase like protein 2 involved_in ISO (PMID:25092655) RGD PMID:25092655 NCBI chr 3:144,201,604...144,227,423
Ensembl chr 3:144,201,605...144,227,485
JBrowse link
G Edem3 ER degradation enhancing alpha-mannosidase like protein 3 involved_in ISO (PMID:25092655)
(MGI:3654428|PMID:16431915)
RGD PMID:16431915 PMID:25092655 MGI:3654428 NCBI chr13:63,858,282...63,920,538
Ensembl chr13:63,858,716...63,920,523
JBrowse link
G Man1a1 mannosidase, alpha, class 1A, member 1 involved_in ISO (PMID:27108681) RGD PMID:27108681 NCBI chr20:33,202,509...33,385,747
Ensembl chr20:33,202,517...33,385,824
JBrowse link
G Man1b1 mannosidase, alpha, class 1B, member 1 involved_in ISO (PMID:18003979), (PMID:21062743) RGD PMID:18003979 PMID:21062743 NCBI chr 3:8,143,877...8,165,007
Ensembl chr 3:8,143,381...8,165,006
JBrowse link
membrane protein proteolysis involved in retrograde protein transport, ER to cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hm13 histocompatibility minor 13 involved_in ISO (PMID:25239945) RGD PMID:25239945 NCBI chr 3:141,145,769...141,184,703
Ensembl chr 3:141,145,782...141,184,703
JBrowse link
G Rhbdd1 rhomboid domain containing 1 involved_in ISO (MGI:5437551|PMID:22795130) RGD PMID:22795130 MGI:5437551 NCBI chr 9:83,630,037...83,748,690
Ensembl chr 9:83,630,063...83,748,689
JBrowse link
mitochondrial protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Afg1l AFG1 like ATPase involved_in ISO (PMID:26759378) RGD PMID:26759378 NCBI chr20:45,798,344...45,967,997 JBrowse link
G Bnip3 BCL2 interacting protein 3 involved_in ISO (PMID:22292033) RGD PMID:22292033 NCBI chr 1:193,708,164...193,725,348
Ensembl chr 1:193,708,167...193,725,359
JBrowse link
G Bnip3l BCL2 interacting protein 3 like involved_in ISO (PMID:21264228) RGD PMID:21264228 NCBI chr15:41,174,594...41,197,730
Ensembl chr15:41,174,594...41,197,803
JBrowse link
G Pisd phosphatidylserine decarboxylase involved_in ISO
ISS
(PMID:30858161)
GO_REF:0000024
RGD
UniProt
PMID:30858161 GO_REF:0000024 NCBI chr14:77,941,927...77,991,021
Ensembl chr14:77,941,948...77,991,003
JBrowse link
G Proca1 protein interacting with cyclin A1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr10:63,090,018...63,102,941
Ensembl chr10:63,090,018...63,102,940
JBrowse link
G Spata18 spermatogenesis associated 18 involved_in ISS
IBA
ISO
IEA
GO_REF:0000024
PMID:21873635
(PMID:21264221), (PMID:21264228)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:21264221 PMID:21264228 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr14:34,531,931...34,558,671
Ensembl chr14:34,531,061...34,558,687
JBrowse link
G Yme1l1 YME1-like 1 ATPase involved_in ISO (PMID:27495975), (PMID:27786171) RGD PMID:27495975 PMID:27786171 NCBI chr17:85,287,607...85,326,068
Ensembl chr17:85,287,554...85,326,335
JBrowse link
modification-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07037998.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07043601.3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07043659.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Chfr checkpoint with forkhead and ring finger domains involved_in ISO
ISS
(PMID:19182791)
GO_REF:0000024
RGD
UniProt
PMID:19182791 GO_REF:0000024 NCBI chr12:46,504,497...46,538,104
Ensembl chr12:46,504,497...46,538,014
JBrowse link
G Isg15 ISG15 ubiquitin-like modifier involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3511369|PMID:15485925)
RGD PMID:15485925 PMID:21873635 MGI:3511369, RGD:13792537 NCBI chr 5:166,784,148...166,785,435
Ensembl chr 5:166,784,148...166,785,435
JBrowse link
G Nedd8 NEDD8 ubiquitin like modifier involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:29,153,556...29,165,575
Ensembl chr15:29,153,556...29,166,160
JBrowse link
G Rps27a ribosomal protein S27a involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:103,285,734...103,288,011
Ensembl chr14:103,285,734...103,288,011
JBrowse link
G Rps27a-ps28 ribosomal protein S27a, pseudogene 28 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:234,661,778...234,662,393
Ensembl chr18:24,242,880...24,243,492
JBrowse link
G Rps27a-ps5 ribosomal protein S27a, pseudogene 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:34,393,983...34,394,450 JBrowse link
G Rps27a-ps6 ribosomal protein S27a, pseudogene 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:30,916,279...30,916,833 JBrowse link
G Uba52 ubiquitin A-52 residue ribosomal protein fusion product 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:18,918,614...18,920,807 JBrowse link
G Uba7 ubiquitin-like modifier activating enzyme 7 acts_upstream_of_or_within ISO (MGI:3511369|PMID:15485925) RGD PMID:15485925 MGI:3511369 NCBI chr 8:108,665,289...108,674,099
Ensembl chr 8:108,665,292...108,674,099
JBrowse link
G Ubb ubiquitin B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:47,247,629...47,249,335
Ensembl chr10:47,245,637...47,249,333
JBrowse link
G Ubc ubiquitin C involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:31,238,889...31,243,924
Ensembl chr12:31,239,152...31,243,925
JBrowse link
G Ube2l6 ubiquitin-conjugating enzyme E2L 6 acts_upstream_of_or_within ISO (MGI:3511369|PMID:15485925) RGD PMID:15485925 MGI:3511369 NCBI chr 3:69,873,025...69,888,042
Ensembl chr 3:69,873,424...69,888,048
JBrowse link
negative regulation of cellular protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atraid all-trans retinoic acid-induced differentiation factor involved_in ISO (PMID:21723284) RGD PMID:21723284 NCBI chr 6:25,315,236...25,319,804 JBrowse link
G Cdk2 cyclin dependent kinase 2 involved_in ISO (PMID:15750306) RGD PMID:15750306 NCBI chr 7:1,129,878...1,137,431
Ensembl chr 7:1,129,811...1,137,403
JBrowse link
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:16173922)
UniProt
Ensembl
RGD
PMID:16173922 GO_REF:0000024 GO_REF:0000107 NCBI chr10:81,894,393...81,903,581
Ensembl chr10:81,894,393...81,903,590
JBrowse link
G Dab2ip DAB2 interacting protein involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:19903888)
UniProt
Ensembl
RGD
PMID:19903888 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:18,915,290...19,086,282
Ensembl chr 3:18,915,290...19,086,280
JBrowse link
G Nell1 neural EGFL like 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:21723284)
UniProt
Ensembl
RGD
PMID:21723284 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:99,709,305...100,573,872
Ensembl chr 1:99,709,793...100,573,860
JBrowse link
G Rgp1 RGP1 homolog, RAB6A GEF complex partner 1 involved_in ISO (PMID:23091056) RGD PMID:23091056 NCBI chr 5:57,834,467...57,843,087
Ensembl chr 5:57,834,629...57,843,086
JBrowse link
G Ric1 RIC1 homolog, RAB6A GEF complex partner 1 involved_in ISO (PMID:23091056) RGD PMID:23091056 NCBI chr 1:227,285,510...227,384,553
Ensembl chr 1:227,285,210...227,382,863
JBrowse link
negative regulation of ER-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha involved_in ISO
ISS
(PMID:23129660)
GO_REF:0000024
RGD
UniProt
PMID:23129660 GO_REF:0000024 NCBI chr 7:8,653,681...8,670,460
Ensembl chr 7:8,653,778...8,670,458
JBrowse link
G Svip small VCP interacting protein involved_in IBA
ISO
IC
PMID:21873635
(PMID:17872946)
PMID:17000876
RGD PMID:17872946 PMID:21873635 PMID:17000876 RGD:13792537, RGD:10047192 NCBI chr 1:101,587,128...101,592,818
Ensembl chr 1:101,587,128...101,593,116
JBrowse link
G Usp14 ubiquitin specific peptidase 14 involved_in ISO (PMID:19135427) RGD PMID:19135427 NCBI chr18:1,018,111...1,057,727
Ensembl chr18:1,019,400...1,057,519
JBrowse link
negative regulation of ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aqp11 aquaporin 11 involved_in ISS
ISO
GO_REF:0000024
(MGI:3813160|PMID:18606867)
UniProt
RGD
PMID:18606867 GO_REF:0000024 MGI:3813160 NCBI chr 1:152,046,515...152,056,675
Ensembl chr 1:152,046,517...152,056,725
JBrowse link
G Ubxn1 UBX domain protein 1 involved_in ISO (PMID:21135095) RGD PMID:21135095 NCBI chr 1:205,765,212...205,769,236
Ensembl chr 1:205,745,120...205,816,520
JBrowse link
G Usp25 ubiquitin specific peptidase 25 involved_in ISO (PMID:22590560) RGD PMID:22590560 NCBI chr11:15,603,654...15,711,356
Ensembl chr11:15,603,881...15,711,348
JBrowse link
negative regulation of low-density lipoprotein particle receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa2 annexin A2 involved_in ISO (PMID:22848640)
(MGI:5446858|PMID:22848640)
RGD PMID:22848640 MGI:5446858 NCBI chr 8:70,105,268...70,141,663
Ensembl chr 8:70,105,253...70,141,658
JBrowse link
G Furin furin (paired basic amino acid cleaving enzyme) involved_in ISO
IEA
(PMID:16912035)
GO_REF:0000107
RGD
Ensembl
PMID:16912035 GO_REF:0000107 NCBI chr 1:134,348,142...134,361,182
Ensembl chr 1:134,348,144...134,364,314
JBrowse link
negative regulation of lysosomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Laptm4b lysosomal protein transmembrane 4 beta involved_in ISO
ISS
(PMID:25588945)
GO_REF:0000024
RGD
UniProt
PMID:25588945 GO_REF:0000024 NCBI chr 7:65,434,525...65,477,386
Ensembl chr 7:65,434,394...65,477,383
JBrowse link
G Mgat3 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase acts_upstream_of_or_within ISS
ISO
GO_REF:0000024
MGI:1857830 (MGI:5751042|PMID:25592972), (MGI:5816436|PMID:26467158)
UniProt
RGD
PMID:25592972 PMID:26467158 GO_REF:0000024 MGI:5751042 MGI:5816436 NCBI chr 7:111,708,353...111,761,825
Ensembl chr 7:111,675,730...111,762,026
JBrowse link
G Vps35 VPS35 retromer complex component involved_in ISO (MGI:5694519|PMID:26203154) RGD PMID:26203154 MGI:5694519 NCBI chr19:21,765,771...21,801,620
Ensembl chr19:21,765,749...21,801,618
JBrowse link
negative regulation of proteasomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alad aminolevulinate dehydratase involved_in ISO (PMID:8175643) RGD PMID:8175643 NCBI chr 5:75,961,993...75,972,334
Ensembl chr 5:75,961,993...75,972,474
JBrowse link
G F8a1 coagulation factor VIII-associated 1 involved_in ISO
ISS
(PMID:27815841)
GO_REF:0000024
RGD
UniProt
PMID:27815841 GO_REF:0000024 NCBI chr  X:150,957,357...150,958,871
Ensembl chr  X:150,916,679...150,960,168
JBrowse link
G Gabarapl2 GABA type A receptor associated protein like 2 involved_in ISO (PMID:21669198) RGD PMID:21669198 NCBI chr19:39,910,572...39,921,408
Ensembl chr19:39,910,534...39,924,628
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 involved_in IMP
ISO
PMID:17517623
(MGI:6148636|PMID:17517623)
RGD PMID:17517623 PMID:17517623 MGI:6148636, RGD:13514081 NCBI chr 9:15,432,986...15,438,358
Ensembl chr 9:15,433,691...15,438,488
JBrowse link
G Lamp3 lysosomal-associated membrane protein 3 involved_in ISO (PMID:25681212) RGD PMID:25681212 NCBI chr11:81,153,491...81,224,643
Ensembl chr11:81,193,649...81,221,784
JBrowse link
G Marchf7 membrane associated ring-CH-type finger 7 involved_in ISS
ISO
GO_REF:0000024
(PMID:29295817)
UniProt
RGD
PMID:29295817 GO_REF:0000024 NCBI chr 3:44,680,229...44,720,172
Ensembl chr 3:44,681,632...44,720,168
JBrowse link
G Ophn1 oligophrenin 1 involved_in IBA
ISO
PMID:21873635
(MGI:5303043|PMID:21874017)
RGD PMID:21874017 PMID:21873635 MGI:5303043, RGD:13792537 NCBI chr  X:63,599,746...63,976,678
Ensembl chr  X:63,603,042...63,976,633
JBrowse link
G Prkcg protein kinase C, gamma involved_in ISS
ISO
GO_REF:0000024
(MGI:5467682|PMID:23185022)
UniProt
RGD
PMID:23185022 GO_REF:0000024 MGI:5467682 NCBI chr 1:65,832,851...65,860,676
Ensembl chr 1:65,832,855...65,859,384
JBrowse link
G Psme3ip1 proteasome activator subunit 3 interacting protein 1 involved_in ISO (PMID:29934401) RGD PMID:29934401 NCBI chr19:10,401,400...10,430,059
Ensembl chr19:10,401,532...10,429,987
JBrowse link
G Psmf1 proteasome inhibitor subunit 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:10764772)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:10764772 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:140,235,371...140,260,546
Ensembl chr 3:140,235,373...140,260,546
JBrowse link
G Sco1 synthesis of cytochrome C oxidase 1 acts_upstream_of_or_within ISO MGI:2176228|MGI:5758867 (MGI:5643882|PMID:25683716) RGD PMID:25683716 MGI:5643882 NCBI chr10:51,744,656...51,757,246
Ensembl chr10:51,744,656...51,757,237
JBrowse link
G Usp19 ubiquitin specific peptidase 19 involved_in IEA
ISO
GO_REF:0000107
(MGI:5614537|PMID:25088257)
Ensembl
RGD
PMID:25088257 GO_REF:0000107 MGI:5614537 NCBI chr 8:109,190,727...109,201,761
Ensembl chr 8:109,190,724...109,201,741
JBrowse link
negative regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag5 BAG cochaperone 5 involved_in ISO (PMID:24475098) RGD PMID:24475098 NCBI chr 6:130,768,467...130,772,122
Ensembl chr 6:130,768,141...130,772,970
JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISS
ISO
GO_REF:0000024
(MGI:3808636|PMID:18678708)
UniProt
RGD
PMID:18678708 GO_REF:0000024 MGI:3808636 NCBI chr20:3,675,938...3,690,414
Ensembl chr20:3,675,938...3,688,657
JBrowse link
G Camlg calcium modulating ligand involved_in ISO UniProtKB:Q9H9V4 (PMID:20553626) RGD PMID:20553626 NCBI chr17:8,992,697...9,003,576
Ensembl chr17:8,992,696...9,003,552
JBrowse link
G Ccar2 cell cycle and apoptosis regulator 2 involved_in ISO (PMID:23398316) RGD PMID:23398316 NCBI chr15:45,212,797...45,228,001
Ensembl chr15:45,212,803...45,227,636
JBrowse link
G Clec16a C-type lectin domain containing 16A acts_upstream_of_or_within ISO MGI:5648633 (MGI:5603233|PMID:24949970) RGD PMID:24949970 MGI:5603233 NCBI chr10:4,927,804...5,123,749
Ensembl chr10:4,928,030...5,123,578
JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in ISO (PMID:28263186) RGD PMID:28263186 NCBI chr 3:117,861,916...117,882,680
Ensembl chr 3:117,861,653...117,882,680
JBrowse link
G Eif3h eukaryotic translation initiation factor 3, subunit H involved_in ISO (PMID:32269044) RGD PMID:32269044 NCBI chr 7:83,091,045...83,174,436
Ensembl chr 7:83,091,039...83,174,451
JBrowse link
G Fhit fragile histidine triad diadenosine triphosphatase involved_in ISO
ISS
IBA
(PMID:15313915)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:15313915 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr15:13,935,029...15,442,620
Ensembl chr15:13,934,995...15,442,340
JBrowse link
G Gipc1 GIPC PDZ domain containing family, member 1 involved_in ISO (MGI:3807767|PMID:11546783) RGD PMID:11546783 MGI:3807767 NCBI chr19:24,474,291...24,487,083
Ensembl chr19:24,453,123...24,486,997
JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:16280321)
(PMID:24613385)
UniProt
RGD
PMID:16280321 PMID:24613385 GO_REF:0000024 NCBI chr 9:15,432,986...15,438,358
Ensembl chr 9:15,433,691...15,438,488
JBrowse link
G Klhl40 kelch-like family member 40 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5586592|PMID:24960163)
RGD PMID:24960163 PMID:21873635 MGI:5586592, RGD:13792537 NCBI chr 8:121,441,275...121,446,806
Ensembl chr 8:121,441,287...121,446,800
JBrowse link
G Map1a microtubule-associated protein 1A involved_in ISO (MGI:5703671|PMID:26609151) RGD PMID:26609151 MGI:5703671 NCBI chr 3:108,263,217...108,283,936
Ensembl chr 3:108,263,151...108,282,899
JBrowse link
G Mtm1 myotubularin 1 acts_upstream_of_or_within ISO MGI:2450997 (MGI:5510937|PMID:23695157) RGD PMID:23695157 MGI:5510937 NCBI chr 6:488,691...506,964
Ensembl chr 6:488,969...506,860
JBrowse link
G N4bp1 Nedd4 binding protein 1 involved_in IBA
ISO
PMID:21873635
(MGI:3829128|PMID:17592138)
RGD PMID:17592138 PMID:21873635 MGI:3829128, RGD:13792537 NCBI chr19:20,222,811...20,273,570
Ensembl chr19:20,222,776...20,273,570
JBrowse link
G Nop53 NOP53 ribosome biogenesis factor involved_in ISO (PMID:22522597) RGD PMID:22522597 NCBI chr 1:76,629,084...76,636,902
Ensembl chr 1:76,629,069...76,636,902
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase involved_in IEA
ISO
GO_REF:0000107
(PMID:26678539)
Ensembl
RGD
PMID:26678539 GO_REF:0000107 NCBI chr  X:66,771,278...66,816,148
Ensembl chr  X:66,771,349...66,816,146
JBrowse link
G Park7 Parkinsonism associated deglycase involved_in ISO
IEA
(PMID:17015834)
GO_REF:0000107
RGD
Ensembl
PMID:17015834 GO_REF:0000107 NCBI chr 5:161,353,718...161,376,993
Ensembl chr 5:161,353,719...161,376,970
JBrowse link
G Pbk PDZ binding kinase acts_upstream_of_or_within ISO MGI:5293435 (MGI:5293269|PMID:21715333) RGD PMID:21715333 MGI:5293269 NCBI chr15:40,022,873...40,034,014
Ensembl chr15:40,023,002...40,034,014
JBrowse link
G Rpl11 ribosomal protein L11 involved_in ISS
ISO
GO_REF:0000024
(MGI:5897550|PMID:21804542)
UniProt
RGD
PMID:21804542 GO_REF:0000024 MGI:5897550 NCBI chr 5:148,274,060...148,277,708
Ensembl chr 5:148,274,069...148,277,599
JBrowse link
G Rybp RING1 and YY1 binding protein involved_in ISO (PMID:27060496) RGD PMID:27060496 NCBI chr 4:132,876,361...132,927,580
Ensembl chr 4:132,876,361...132,928,316
JBrowse link
G Sdcbp syndecan binding protein involved_in ISO
ISS
(PMID:25893292)
GO_REF:0000024
RGD
UniProt
PMID:25893292 GO_REF:0000024 NCBI chr 5:19,473,499...19,517,188
Ensembl chr 5:19,489,961...19,527,572
JBrowse link
G Senp1 SUMO specific peptidase 1 acts_upstream_of_or_within ISO MGI:3818522 (MGI:3818351|PMID:17981124) RGD PMID:17981124 MGI:3818351 NCBI chr 7:129,163,173...129,226,766
Ensembl chr 7:129,165,774...129,221,598
JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3624046|PMID:16611981)
Ensembl
RGD
PMID:16611981 GO_REF:0000107 MGI:3624046 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
JBrowse link
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 acts_upstream_of_or_within ISO (MGI:5310666|PMID:22285184) RGD PMID:22285184 MGI:5310666 NCBI chr 8:110,111,097...110,214,727
Ensembl chr 8:110,111,122...110,214,720
JBrowse link
G Taf9 TATA-box binding protein associated factor 9 involved_in ISO (PMID:11278372) RGD PMID:11278372 NCBI chr 2:31,794,316...31,798,324 JBrowse link
G Tlk2 tousled-like kinase 2 involved_in ISO (PMID:20016786) RGD PMID:20016786 NCBI chr10:90,154,449...90,248,562
Ensembl chr10:90,156,813...90,248,561
JBrowse link
G Trim39 tripartite motif-containing 39 involved_in IBA
ISS
ISO
PMID:21873635
GO_REF:0000024
(PMID:23213251)
UniProt
RGD
PMID:23213251 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr20:2,003,320...2,017,175
Ensembl chr20:1,983,533...2,020,117
JBrowse link
G Ttc36 tetratricopeptide repeat domain 36 acts_upstream_of_or_within ISO MGI:5588394 (MGI:6362140|PMID:31537781) RGD PMID:31537781 MGI:6362140 NCBI chr 8:45,112,737...45,116,345 JBrowse link
G Ubxn1 UBX domain protein 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:20351172)
UniProt
RGD
PMID:20351172 GO_REF:0000024 NCBI chr 1:205,765,212...205,769,236
Ensembl chr 1:205,745,120...205,816,520
JBrowse link
G Uchl5 ubiquitin C-terminal hydrolase L5 involved_in ISO (PMID:23770237) RGD PMID:23770237 NCBI chr13:55,520,722...55,556,503
Ensembl chr13:55,520,729...55,556,502
JBrowse link
G Usp7 ubiquitin specific peptidase 7 involved_in ISO
IEA
(PMID:26678539)
GO_REF:0000107
RGD
Ensembl
PMID:26678539 GO_REF:0000107 NCBI chr10:6,880,684...6,925,033
Ensembl chr10:6,828,795...6,925,355
JBrowse link
G Wac WW domain containing adaptor with coiled-coil involved_in ISO (PMID:22354037) RGD PMID:22354037 NCBI chr17:55,922,686...55,984,286
Ensembl chr17:55,923,123...55,982,301
JBrowse link
negative regulation of proteolysis involved in cellular protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdkn2a cyclin-dependent kinase inhibitor 2A involved_in
acts_upstream_of_or_within
ISO UniProtKB:Q9BXM7 (PMID:25217637)
(MGI:5468878|PMID:23277542)
RGD PMID:23277542 PMID:25217637 MGI:5468878 NCBI chr 5:103,984,949...103,992,143
Ensembl chr 5:103,984,949...104,003,149
JBrowse link
G Efna1 ephrin A1 involved_in ISO UniProtKB:P54764 (PMID:24217950) RGD PMID:24217950 NCBI chr 2:174,681,676...174,690,306
Ensembl chr 2:174,681,682...174,690,866
JBrowse link
G Epha4 Eph receptor A4 involved_in ISO UniProtKB:P20827 (PMID:24217950) RGD PMID:24217950 NCBI chr 9:78,815,460...78,958,139
Ensembl chr 9:78,815,460...78,958,139
JBrowse link
negative regulation of retrograde protein transport, ER to cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Derl2 derlin 2 involved_in ISO (PMID:25660456) RGD PMID:25660456 NCBI chr10:55,727,764...55,739,462
Ensembl chr10:55,727,643...55,739,518
JBrowse link
G Derl3 derlin 3 involved_in ISO (PMID:25660456) RGD PMID:25660456 NCBI chr20:12,754,490...12,768,454
Ensembl chr20:12,763,543...12,767,027
JBrowse link
G Erlec1 endoplasmic reticulum lectin 1 involved_in ISO (PMID:25660456) RGD PMID:25660456 NCBI chr14:104,655,745...104,693,508
Ensembl chr14:104,655,673...104,693,480
JBrowse link
G Os9 OS9, endoplasmic reticulum lectin involved_in ISO (PMID:25660456) RGD PMID:25660456 NCBI chr 7:62,915,498...62,957,591
Ensembl chr 7:62,915,515...62,943,745
JBrowse link
G Svip small VCP interacting protein involved_in IBA
ISO
PMID:21873635
(PMID:25660456)
RGD PMID:25660456 PMID:21873635 RGD:13792537 NCBI chr 1:101,587,128...101,592,818
Ensembl chr 1:101,587,128...101,593,116
JBrowse link
G Ubac2 UBA domain containing 2 involved_in ISO (PMID:25660456) RGD PMID:25660456 NCBI chr15:98,960,139...99,107,795
Ensembl chr15:98,960,139...99,107,787
JBrowse link
G Ube2g2 ubiquitin-conjugating enzyme E2G 2 involved_in ISO (PMID:25660456) RGD PMID:25660456 NCBI chr20:10,983,734...11,005,468
Ensembl chr20:10,983,742...11,005,447
JBrowse link
G Ube2j1 ubiquitin-conjugating enzyme E2, J1 involved_in ISO (PMID:25660456) RGD PMID:25660456 NCBI chr 5:47,422,513...47,441,476
Ensembl chr 5:47,422,587...47,441,461
JBrowse link
G Yod1 YOD1 deubiquitinase involved_in ISO (PMID:24068323) RGD PMID:24068323 NCBI chr13:42,175,313...42,177,030
Ensembl chr13:42,174,820...42,177,205
JBrowse link
negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Styx serine/threonine/tyrosine interacting protein involved_in IBA
ISO
PMID:21873635
(PMID:28007894)
RGD PMID:28007894 PMID:21873635 RGD:13792537 NCBI chr15:18,565,214...18,595,797
Ensembl chr15:18,564,633...18,593,524
JBrowse link
negative regulation of ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anks1a ankyrin repeat and sterile alpha motif domain containing 1A acts_upstream_of_or_within ISO (MGI:4461099|PMID:20100865) RGD PMID:20100865 MGI:4461099 NCBI chr20:5,963,658...6,117,139
Ensembl chr20:5,963,678...6,117,148
JBrowse link
G Cdkn2a cyclin-dependent kinase inhibitor 2A involved_in
acts_upstream_of_or_within
ISO (PMID:16173922)
(MGI:5468878|PMID:23277542)
(PMID:18560357)
RGD PMID:16173922 PMID:18560357 PMID:23277542 MGI:5468878 NCBI chr 5:103,984,949...103,992,143
Ensembl chr 5:103,984,949...104,003,149
JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 involved_in ISO UniProtKB:P19784|UniProtKB:P25686|UniProtKB:P67870 (PMID:28031292) RGD PMID:28031292 NCBI chr 3:140,709,984...140,756,757
Ensembl chr 3:140,709,991...140,756,696
JBrowse link
G Csnk2a2 casein kinase 2 alpha 2 involved_in ISO UniProtKB:P25686|UniProtKB:P67870|UniProtKB:P68400 (PMID:28031292) RGD PMID:28031292 NCBI chr19:9,556,443...9,596,080
Ensembl chr19:9,556,260...9,596,080
JBrowse link
G Hfe homeostatic iron regulator involved_in ISO (PMID:24904118) RGD PMID:24904118 NCBI chr17:41,413,451...41,421,502
Ensembl chr17:41,413,451...41,421,502
JBrowse link
G Hipk2 homeodomain interacting protein kinase 2 involved_in ISO (PMID:21628596) RGD PMID:21628596 NCBI chr 4:67,439,327...67,619,223
Ensembl chr 4:67,440,501...67,619,223
JBrowse link
G Pdcl3 phosducin-like 3 acts_upstream_of_or_within ISO (PMID:23792958) RGD PMID:23792958 NCBI chr 9:41,234,322...41,243,769
Ensembl chr 9:41,234,234...41,243,735
JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (PMID:15195100) RGD PMID:15195100 NCBI chr 8:58,627,347...58,661,927
Ensembl chr 8:58,628,837...58,658,971
JBrowse link
G Psen1 presenilin 1 involved_in ISO (MGI:4887523|PMID:20208556) RGD PMID:20208556 MGI:4887523 NCBI chr 6:103,323,014...103,375,088
Ensembl chr 6:103,323,120...103,371,650
JBrowse link
G Psen2 presenilin 2 involved_in ISO (MGI:4887523|PMID:20208556) RGD PMID:20208556 MGI:4887523 NCBI chr13:91,967,506...91,993,240
Ensembl chr13:91,967,983...91,993,174
JBrowse link
G Qrich2 glutamine rich 2 involved_in ISO (PMID:30683861)
(MGI:6277293|PMID:30683861)
RGD PMID:30683861 MGI:6277293 NCBI chr10:101,669,235...101,685,281
Ensembl chr10:101,669,224...101,697,656
JBrowse link
G Rpl11 ribosomal protein L11 involved_in ISO (PMID:18560357) RGD PMID:18560357 NCBI chr 5:148,274,060...148,277,708
Ensembl chr 5:148,274,069...148,277,599
JBrowse link
G Rpl23 ribosomal protein L23 involved_in ISO (PMID:15314173) RGD PMID:15314173 NCBI chr10:82,771,878...82,775,840
Ensembl chr10:82,771,538...82,775,870
JBrowse link
G Rpl5 ribosomal protein L5 involved_in ISO (PMID:18560357) RGD PMID:18560357 NCBI chr14:1,843,856...1,850,301
Ensembl chr14:1,843,770...1,850,290
JBrowse link
G Rps7 ribosomal protein S7 involved_in ISO (PMID:17310983) RGD PMID:17310983 NCBI chr 6:45,266,200...45,271,064 JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha involved_in ISS
ISO
GO_REF:0000024
(PMID:23129660)
UniProt
RGD
PMID:23129660 GO_REF:0000024 NCBI chr 7:8,653,681...8,670,460
Ensembl chr 7:8,653,778...8,670,458
JBrowse link
G Sufu SUFU negative regulator of hedgehog signaling acts_upstream_of_or_within ISO MGI:1343085 (MGI:4355593|PMID:19684112) RGD PMID:19684112 MGI:4355593 NCBI chr 1:245,257,725...245,355,576
Ensembl chr 1:245,257,768...245,355,577
JBrowse link
G Taf1 TATA-box binding protein associated factor 1 involved_in ISO (PMID:17237821) RGD PMID:17237821 NCBI chr  X:66,640,915...66,716,543
Ensembl chr  X:66,640,982...66,716,543
JBrowse link
G Trim39 tripartite motif-containing 39 involved_in ISO (PMID:19100260) RGD PMID:19100260 NCBI chr20:2,003,320...2,017,175
Ensembl chr20:1,983,533...2,020,117
JBrowse link
G Wnt1 Wnt family member 1 acts_upstream_of_or_within ISO (MGI:3628833|PMID:16601693) RGD PMID:16601693 MGI:3628833 NCBI chr 7:129,938,604...129,942,651
Ensembl chr 7:129,938,604...129,942,651
JBrowse link
nuclear protein quality control by the ubiquitin-proteasome system term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cul3 cullin 3 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:27561354)
UniProt
Ensembl
RGD
PMID:27561354 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:81,592,641...81,670,428
Ensembl chr 9:81,592,641...81,670,462
JBrowse link
G Klhl15 kelch-like family member 15 involved_in ISO
ISS
(PMID:27561354)
GO_REF:0000024
RGD
UniProt
PMID:27561354 GO_REF:0000024 NCBI chr  X:58,994,726...59,050,207
Ensembl chr  X:58,995,461...59,046,069
JBrowse link
oxidation-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lonp1 lon peptidase 1, mitochondrial involved_in ISO (PMID:12198491) RGD PMID:12198491 NCBI chr 9:1,447,444...1,459,771
Ensembl chr 9:1,447,447...1,459,771
JBrowse link
positive regulation of anaphase-promoting complex-dependent catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc20 cell division cycle 20 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:131,966,203...131,970,406
Ensembl chr 5:131,966,215...131,970,512
JBrowse link
G Fzr1 fizzy and cell division cycle 20 related 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:8,332,029...8,343,953
Ensembl chr 7:8,332,029...8,343,952
JBrowse link
positive regulation of cellular protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Amer1 APC membrane recruitment protein 1 involved_in ISO (PMID:17510365) RGD PMID:17510365 NCBI chr  X:60,300,595...60,316,480
Ensembl chr  X:60,295,751...60,316,440
JBrowse link
G Dact1 dishevelled-binding antagonist of beta-catenin 1 involved_in ISO (PMID:16446366), (PMID:18936100) RGD PMID:16446366 PMID:18936100 NCBI chr 6:89,790,676...89,818,254
Ensembl chr 6:89,790,644...89,817,906
JBrowse link
G Ezr ezrin involved_in ISO UniProtKB:P26038|UniProtKB:P35241 (PMID:21148287) RGD PMID:21148287 NCBI chr 1:46,967,961...47,011,505
Ensembl chr 1:46,967,658...47,011,505
JBrowse link
G Faf1 Fas associated factor 1 involved_in ISO
IEA
(PMID:26842564)
GO_REF:0000107
RGD
Ensembl
PMID:26842564 GO_REF:0000107 NCBI chr 5:124,426,032...124,790,014
Ensembl chr 5:124,426,062...124,789,977
JBrowse link
G Fbxl5 F-box and leucine-rich repeat protein 5 acts_upstream_of_or_within ISO MGI:5295289 (MGI:5292406|PMID:21907140) RGD PMID:21907140 MGI:5292406 NCBI chr14:67,305,109...67,347,383
Ensembl chr14:67,267,801...67,347,383
JBrowse link
G Hamp hepcidin antimicrobial peptide acts_upstream_of_or_within ISO (MGI:5293184|PMID:21700773) RGD PMID:21700773 MGI:5293184 NCBI chr 1:86,170,926...86,172,865
Ensembl chr 1:86,170,901...86,172,891
JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 involved_in ISO UniProtKB:Q9UNE7 (PMID:18292230) RGD PMID:18292230 NCBI chr 6:129,702,376...129,707,907
Ensembl chr 6:129,702,383...129,707,268
JBrowse link
G Msn moesin involved_in ISO
IEA
UniProtKB:P15311|UniProtKB:P35241 (PMID:21148287)
GO_REF:0000107
RGD
Ensembl
PMID:21148287 GO_REF:0000107 NCBI chr  X:60,996,043...61,064,011
Ensembl chr  X:60,995,951...61,065,628
JBrowse link
G Pttg1ip PTTG1 interacting protein acts_upstream_of_or_within ISO (PMID:24506068) RGD PMID:24506068 NCBI chr20:11,030,013...11,047,742
Ensembl chr20:11,030,015...11,047,316
JBrowse link
G Rdx radixin involved_in ISO UniProtKB:P15311|UniProtKB:P26038 (PMID:21148287) RGD PMID:21148287 NCBI chr 8:52,379,494...52,437,673
Ensembl chr 8:52,379,494...52,437,678
JBrowse link
G Tnfaip3 TNF alpha induced protein 3 acts_upstream_of_or_within ISO (MGI:3839729|PMID:18952128) RGD PMID:18952128 MGI:3839729 NCBI chr 1:13,709,211...13,724,291
Ensembl chr 1:13,709,206...13,725,282
JBrowse link
G Vgll4 vestigial-like family member 4 involved_in ISO (MGI:6120600|PMID:27720608) RGD PMID:27720608 MGI:6120600 NCBI chr 4:147,925,630...148,038,514
Ensembl chr 4:147,927,034...148,038,471
JBrowse link
G Vps11 VPS11 core subunit of CORVET and HOPS complexes involved_in ISO (PMID:21148287) RGD PMID:21148287 NCBI chr 8:44,683,768...44,698,572
Ensembl chr 8:44,684,127...44,698,568
JBrowse link
G Vps35 VPS35 retromer complex component involved_in ISO UniProtKB:P37840 (PMID:25533483) RGD PMID:25533483 NCBI chr19:21,765,771...21,801,620
Ensembl chr19:21,765,749...21,801,618
JBrowse link
positive regulation of ER-associated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcap31 B-cell receptor-associated protein 31 involved_in ISO UniProtKB:Q9BUN8 (PMID:18555783) RGD PMID:18555783 NCBI chr  X:151,397,567...151,429,666
Ensembl chr  X:151,397,576...151,428,506
JBrowse link
G Cav1 caveolin 1 involved_in ISO
IEA
(PMID:24089527)
GO_REF:0000107
RGD
Ensembl
PMID:24089527 GO_REF:0000107 NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705
JBrowse link
G Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 involved_in ISO
ISS
(PMID:18307982), (PMID:22045699) RGD PMID:18307982 PMID:22045699 PMID:22045699 RGD:10047316 NCBI chr19:10,598,411...10,609,002
Ensembl chr19:10,598,417...10,618,424
JBrowse link
G Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha involved_in ISO (PMID:23246001) RGD PMID:23246001 NCBI chr 7:8,653,681...8,670,460
Ensembl chr 7:8,653,778...8,670,458
JBrowse link
G Ubqln1 ubiquilin 1 involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:18307982)
Ensembl
UniProt
RGD
PMID:18307982 GO_REF:0000024 GO_REF:0000107 NCBI chr17:6,439,002...6,477,096
Ensembl chr17:6,439,002...6,477,090
JBrowse link
G Ubqln2 ubiquilin 2 involved_in ISO (PMID:18307982) RGD PMID:18307982 NCBI chr  X:17,853,086...17,856,505
Ensembl chr  X:17,853,114...17,856,505
JBrowse link
positive regulation of ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atxn3 ataxin 3 involved_in ISO (PMID:17000876) RGD PMID:17000876 NCBI chr 6:121,072,228...121,107,902
Ensembl chr 6:121,074,448...121,107,902
JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISO (PMID:24424410) RGD PMID:24424410 NCBI chr20:3,675,938...3,690,414
Ensembl chr20:3,675,938...3,688,657
JBrowse link
G Rnf185 ring finger protein 185 involved_in ISO
ISS
(PMID:27485036)
GO_REF:0000024
RGD
UniProt
PMID:27485036 GO_REF:0000024 NCBI chr14:78,292,517...78,329,832
Ensembl chr14:78,292,516...78,329,864
JBrowse link
G Rnft1 ring finger protein, transmembrane 1 involved_in ISO
IBA
(PMID:27485036)
PMID:21873635
RGD PMID:27485036 PMID:21873635 RGD:13792537 NCBI chr10:71,310,052...71,322,507
Ensembl chr10:71,310,104...71,323,778
JBrowse link
G Rnft2 ring finger protein, transmembrane 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr12:38,329,217...38,387,303
Ensembl chr12:38,329,269...38,387,290
JBrowse link
G Tmem259 transmembrane protein 259 involved_in IBA
ISO
PMID:21873635
(MGI:5648655|PMID:25977983)
RGD PMID:25977983 PMID:21873635 MGI:5648655, RGD:13792537 NCBI chr 7:9,724,196...9,730,932
Ensembl chr 7:9,722,485...9,730,932
JBrowse link
G Tmem67 transmembrane protein 67 IMP RGD PMID:19815549 RGD:8554391 NCBI chr 5:25,536,458...25,589,378
Ensembl chr 5:25,536,458...25,589,334
JBrowse link
G Usp13 ubiquitin specific peptidase 13 involved_in ISO (PMID:24424410) RGD PMID:24424410 NCBI chr 2:115,576,912...115,689,153
Ensembl chr 2:115,577,091...115,686,222
JBrowse link
positive regulation of low-density lipoprotein particle receptor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca2 ATP binding cassette subfamily A member 2 acts_upstream_of
involved_in
ISO
IEA
(PMID:21810484)
GO_REF:0000107
RGD
Ensembl
PMID:21810484 GO_REF:0000107 NCBI chr 3:8,244,515...8,264,545
Ensembl chr 3:8,244,639...8,264,537
JBrowse link
G Apoe apolipoprotein E involved_in ISO
IEA
(PMID:15950758)
GO_REF:0000107
RGD
Ensembl
PMID:15950758 GO_REF:0000107 NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
JBrowse link
G Pcsk9 proprotein convertase subtilisin/kexin type 9 involved_in ISO (PMID:22848640) RGD PMID:22848640 NCBI chr 5:121,211,278...121,233,688
Ensembl chr 5:121,211,278...121,233,688
JBrowse link
positive regulation of lysosomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ldlr low density lipoprotein receptor involved_in IEA
ISO
GO_REF:0000107
(MGI:5902678|PMID:22383525)
Ensembl
RGD
PMID:22383525 GO_REF:0000107 MGI:5902678 NCBI chr 8:20,270,020...20,292,981
Ensembl chr 8:20,270,041...20,294,580
JBrowse link
G Lrp1 LDL receptor related protein 1 involved_in ISO (PMID:23152628) RGD PMID:23152628 NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
JBrowse link
G Lrp2 LDL receptor related protein 2 involved_in ISO (PMID:9228033) RGD PMID:9228033 NCBI chr 3:54,189,305...54,346,769
Ensembl chr 3:54,189,308...54,346,708
JBrowse link
positive regulation of proteasomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag2 BAG cochaperone 2 involved_in ISO UniProtKB:P10636 (MGI:6148635|PMID:19228967) RGD PMID:19228967 MGI:6148635 NCBI chr 9:35,970,033...35,980,677
Ensembl chr 9:35,970,033...35,980,721
JBrowse link
G Dab2ip DAB2 interacting protein involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:20080667)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:20080667 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:18,915,290...19,086,282
Ensembl chr 3:18,915,290...19,086,280
JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in ISO (PMID:23675531) RGD PMID:23675531 NCBI chr 3:117,861,916...117,882,680
Ensembl chr 3:117,861,653...117,882,680
JBrowse link
G Ecscr endothelial cell surface expressed chemotaxis and apoptosis regulator involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(PMID:19416853)
RGD PMID:19416853 PMID:21873635 RGD:13792537 NCBI chr18:27,309,711...27,319,106
Ensembl chr18:27,309,718...27,319,032
JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in ISO (PMID:23858059)
(MGI:5543313|PMID:23858059)
RGD PMID:23858059 MGI:5543313 NCBI chr 2:170,150,552...170,310,698
Ensembl chr 2:170,149,694...170,309,941
JBrowse link
G Fmr1 FMRP translational regulator 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5770038|PMID:24709664)
UniProt
RGD
PMID:24709664 GO_REF:0000024 MGI:5770038 NCBI chr  X:147,240,239...147,278,057
Ensembl chr  X:147,240,301...147,278,050
JBrowse link
G Kcne2 potassium voltage-gated channel subfamily E regulatory subunit 2 involved_in ISO (PMID:22180649) RGD PMID:22180649 NCBI chr11:31,517,176...31,530,026
Ensembl chr11:31,295,614...31,530,043
JBrowse link
G Nupr1 nuclear protein 1, transcriptional regulator involved_in ISS
ISO
GO_REF:0000024
(PMID:16300740)
UniProt
RGD
PMID:16300740 GO_REF:0000024 NCBI chr 1:181,213,292...181,215,327 JBrowse link
G Osbpl7 oxysterol binding protein-like 7 involved_in ISO (PMID:21669198) RGD PMID:21669198 NCBI chr10:82,035,995...82,053,566
Ensembl chr10:82,036,042...82,053,557
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO UniProtKB:Q9WVS6 (PMID:23858059) RGD PMID:23858059 NCBI chr 1:48,688,651...49,882,520 JBrowse link
G Psmc1 proteasome 26S subunit, ATPase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:119,392,833...119,405,233
Ensembl chr 6:119,392,855...119,410,123
JBrowse link
G Psmc2 proteasome 26S subunit, ATPase 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:13,255,851...13,270,102
Ensembl chr 4:13,255,856...13,270,185
JBrowse link
G Psmc3 proteasome 26S subunit, ATPase 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:77,031,825...77,037,207
Ensembl chr 3:77,031,825...77,043,358
JBrowse link
G Psmc4 proteasome 26S subunit, ATPase 4 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:83,349,127...83,357,497
Ensembl chr 1:83,348,592...83,357,494
JBrowse link
G Psmc5 proteasome 26S subunit, ATPase 5 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr10:91,187,763...91,193,697
Ensembl chr10:91,187,743...91,213,135
JBrowse link
G Psmc6 proteasome 26S subunit, ATPase 6 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:18,542,585...18,564,057
Ensembl chr15:18,542,563...18,564,055
JBrowse link
G Rnf40 ring finger protein 40 IDA RGD PMID:12121982 RGD:633892 NCBI chr 1:182,202,475...182,217,899
Ensembl chr 1:182,202,600...182,217,241
JBrowse link
G Tmtc3 transmembrane O-mannosyltransferase targeting cadherins 3 involved_in ISO (PMID:21603654) RGD PMID:21603654 NCBI chr 7:35,264,886...35,310,010
Ensembl chr 7:35,264,892...35,310,385
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:6150565|PMID:29518356) RGD PMID:29518356 MGI:6150565 NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170
JBrowse link
G Xbp1 X-box binding protein 1 acts_upstream_of_or_within ISO (MGI:4946566|PMID:21317886) RGD PMID:21317886 MGI:4946566 NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
JBrowse link
positive regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 acts_upstream_of_or_within ISO (MGI:3589701|PMID:15937334) RGD PMID:15937334 MGI:3589701 NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921
JBrowse link
G Ankib1 ankyrin repeat and IBR domain containing 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:30,333,678...30,457,781
Ensembl chr 4:30,333,677...30,457,781
JBrowse link
G Arih1 ariadne RBR E3 ubiquitin protein ligase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:59,777,378...59,879,762
Ensembl chr 8:59,777,379...59,880,245
JBrowse link
G Arih2 ariadne RBR E3 ubiquitin protein ligase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:109,296,738...109,355,909
Ensembl chr 8:109,296,738...109,355,852
JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO MGI:2446434|MGI:3587769|MGI:3691571 (MGI:5465208|PMID:23152632) RGD PMID:23152632 MGI:5465208 NCBI chr 4:147,718,663...147,925,656
Ensembl chr 4:147,718,752...147,925,593
JBrowse link
G Aurka aurora kinase A involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3697244|PMID:17060449)
Ensembl
RGD
PMID:17060449 GO_REF:0000107 MGI:3697244 NCBI chr 3:161,128,309...161,144,524
Ensembl chr 3:161,128,313...161,144,390
JBrowse link
G Axin1 axin 1 acts_upstream_of_or_within ISO (MGI:3628833|PMID:16601693) RGD PMID:16601693 MGI:3628833 NCBI chr10:15,163,684...15,215,615
Ensembl chr10:15,163,684...15,215,615
JBrowse link
G Bag2 BAG cochaperone 2 NOT|involved_in ISO UniProtKB:P10636 (MGI:6148635|PMID:19228967) RGD PMID:19228967 MGI:6148635 NCBI chr 9:35,970,033...35,980,677
Ensembl chr 9:35,970,033...35,980,721
JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 acts_upstream_of_or_within ISO UniProtKB:Q99496 (PMID:22302990) RGD PMID:22302990 NCBI chr 2:119,434,760...119,474,665
Ensembl chr 2:119,434,760...119,474,396
JBrowse link
G Cbfa2t3 CBFA2/RUNX1 partner transcriptional co-repressor 3 involved_in ISO (PMID:25974097) RGD PMID:25974097 NCBI chr19:50,679,897...50,750,028
Ensembl chr19:50,680,729...50,749,610
JBrowse link
G Chfr checkpoint with forkhead and ring finger domains acts_upstream_of_or_within ISO (MGI:5310666|PMID:22285184) RGD PMID:22285184 MGI:5310666 NCBI chr12:46,504,497...46,538,104
Ensembl chr12:46,504,497...46,538,014
JBrowse link
G Clu clusterin involved_in ISO
IEA
ISS
IBA
(PMID:20068069)
GO_REF:0000107
GO_REF:0000024
PMID:21873635
RGD
Ensembl
UniProt
PMID:20068069 PMID:21873635 GO_REF:0000024 GO_REF:0000107, RGD:13792537 NCBI chr15:40,161,068...40,200,315
Ensembl chr15:40,174,617...40,200,315
JBrowse link
G Cop1 COP1, E3 ubiquitin ligase involved_in ISO (PMID:19805145) RGD PMID:19805145 NCBI chr13:71,467,164...71,561,826
Ensembl chr13:71,429,961...71,538,890
JBrowse link
G Csnk1a1 casein kinase 1, alpha 1 involved_in ISO
IEA
(PMID:11955436), (PMID:19364825)
GO_REF:0000107
RGD
Ensembl
PMID:11955436 PMID:19364825 GO_REF:0000107 NCBI chr18:55,017,049...55,050,184
Ensembl chr18:55,017,055...55,049,271
JBrowse link
G Csnk1d casein kinase 1, delta involved_in IBA
ISO
ISS
PMID:21873635
(MGI:3849793|PMID:19414593)
GO_REF:0000024
RGD
UniProt
PMID:19414593 PMID:21873635 GO_REF:0000024 MGI:3849793, RGD:13792537 NCBI chr10:106,221,992...106,256,620
Ensembl chr10:106,221,992...106,256,614
JBrowse link
G Csnk1e casein kinase 1, epsilon involved_in IBA
ISO
PMID:21873635
(MGI:3849793|PMID:19414593)
RGD PMID:19414593 PMID:21873635 MGI:3849793, RGD:13792537 NCBI chr 7:110,983,322...111,006,926
Ensembl chr 7:110,983,318...111,006,794
JBrowse link
G Dab2 DAB adaptor protein 2 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 2:55,514,692...55,567,476
Ensembl chr 2:55,514,700...55,567,476
JBrowse link
G Dda1 DET1 and DDB1 associated 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:18,156,310...18,163,938
Ensembl chr16:18,156,386...18,163,937
JBrowse link
G Ddrgk1 DDRGK domain containing 1 involved_in ISO (PMID:23675531) RGD PMID:23675531 NCBI chr 3:117,861,916...117,882,680
Ensembl chr 3:117,861,653...117,882,680
JBrowse link
G Det1 DET1 partner of COP1 E3 ubiquitin ligase involved_in IBA
ISO
PMID:21873635
UniProtKB:Q8NHY2 (PMID:14739464)
RGD PMID:14739464 PMID:21873635 RGD:13792537 NCBI chr 1:132,749,736...132,765,963
Ensembl chr 1:132,749,756...132,765,923
JBrowse link
G Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 involved_in IBA
ISO
PMID:21873635
(PMID:15936278)
RGD PMID:15936278 PMID:21873635 RGD:13792537 NCBI chr 9:76,731,060...76,739,278
Ensembl chr 9:76,731,065...76,739,277
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 involved_in ISO (PMID:20177058) RGD PMID:20177058 NCBI chr 5:166,456,989...166,468,733
Ensembl chr 5:166,456,686...166,468,664
JBrowse link
G Fbxo22 F-box protein 22 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3840749|PMID:19319192)
RGD PMID:19319192 PMID:21873635 MGI:3840749, RGD:13792537 NCBI chr 8:55,579,906...55,595,981
Ensembl chr 8:55,579,891...55,596,148
JBrowse link
G Gabarap GABA type A receptor-associated protein involved_in ISS
ISO
GO_REF:0000024
(PMID:25684205)
UniProt
RGD
PMID:25684205 GO_REF:0000024 NCBI chr10:54,714,834...54,717,769
Ensembl chr10:54,714,198...54,717,765
JBrowse link
G Gba glucosylceramidase beta involved_in ISO (MGI:5501380|PMID:23707074) RGD PMID:23707074 MGI:5501380 NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263
JBrowse link
G Gclc glutamate-cysteine ligase, catalytic subunit acts_upstream_of_or_within ISO MGI:2387010 (MGI:3695876|PMID:17189825) RGD PMID:17189825 MGI:3695876 NCBI chr 8:78,629,899...78,668,547
Ensembl chr 8:78,630,127...78,668,544
JBrowse link
G Gsk3a glycogen synthase kinase 3 alpha involved_in ISO (PMID:25897075) RGD PMID:25897075 NCBI chr 1:80,815,843...80,825,732
Ensembl chr 1:80,815,850...80,825,802
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:19364825), (PMID:25897075)
GO_REF:0000107
MGI:1924375|MGI:3039600 (MGI:5437589|PMID:22660580)
RGD
Ensembl
PMID:19364825 PMID:22660580 PMID:25897075 GO_REF:0000107 MGI:5437589 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646
JBrowse link
G Hspa1a heat shock protein family A (Hsp70) member 1A involved_in IBA
ISO
PMID:21873635
(PMID:24613385)
RGD PMID:24613385 PMID:21873635 RGD:13792537
G Hspa1b heat shock protein family A (Hsp70) member 1B involved_in IBA
ISO
PMID:21873635
(PMID:24613385)
RGD PMID:24613385 PMID:21873635 RGD:13792537 NCBI chr20:3,855,104...3,859,148
Ensembl chr20:3,856,006...3,873,240
JBrowse link
G Hspbp1 HSPA (Hsp70) binding protein 1 involved_in ISO (PMID:16831871) RGD PMID:16831871 NCBI chr 1:69,165,394...69,189,062
Ensembl chr 1:69,165,572...69,244,593
JBrowse link
G Il33 interleukin 33 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1861437|MGI:3039600 (MGI:5437589|PMID:22660580)
Ensembl
RGD
PMID:22660580 GO_REF:0000107 MGI:5437589 NCBI chr 1:227,701,964...227,736,374
Ensembl chr 1:227,721,435...227,736,373
JBrowse link
G Klhl40 kelch-like family member 40 involved_in ISO (MGI:5700633|PMID:25940086) RGD PMID:25940086 MGI:5700633 NCBI chr 8:121,441,275...121,446,806
Ensembl chr 8:121,441,287...121,446,800
JBrowse link
G LOC108348108 heat shock 70 kDa protein 1A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:3,870,765...3,873,221 JBrowse link
G Lrrk2 leucine-rich repeat kinase 2 involved_in ISO (MGI:4454597|PMID:20457918) RGD PMID:20457918 MGI:4454597 NCBI chr 7:122,826,712...122,987,711
Ensembl chr 7:122,826,696...122,987,703
JBrowse link
G Mdm2 MDM2 proto-oncogene involved_in ISO (PMID:11278372) RGD PMID:11278372 NCBI chr 7:53,290,660...53,315,205
Ensembl chr 7:53,290,664...53,314,915
JBrowse link
G Nkd2 NKD inhibitor of WNT signaling pathway 2 involved_in ISO (PMID:20177058) RGD PMID:20177058 NCBI chr 1:29,442,898...29,470,839
Ensembl chr 1:29,441,328...29,470,821
JBrowse link
G Nop53 NOP53 ribosome biogenesis factor involved_in ISO (PMID:25818168), (PMID:27323397)
(MGI:5897550|PMID:21804542)
RGD PMID:21804542 PMID:25818168 PMID:27323397 MGI:5897550 NCBI chr 1:76,629,084...76,636,902
Ensembl chr 1:76,629,069...76,636,902
JBrowse link
G Nub1 negative regulator of ubiquitin-like proteins 1 involved_in ISO (PMID:16707496) RGD PMID:16707496 NCBI chr 4:10,442,917...10,473,689
Ensembl chr 4:10,442,917...10,473,694
JBrowse link
G Pabir1 PP2A Aalpha (PPP2R1A) and B55A (PPP2R2A) interacting phosphatase regulator 1 involved_in ISO
ISS
(PMID:27588481)
GO_REF:0000024
RGD
UniProt
PMID:27588481 GO_REF:0000024 NCBI chr 1:222,114,988...222,116,294
Ensembl chr 1:222,112,591...222,116,396
JBrowse link
G Pias1 protein inhibitor of activated STAT, 1 involved_in ISO (MGI:5487503|PMID:22406621) RGD PMID:22406621 MGI:5487503 NCBI chr 8:63,338,150...63,451,670
Ensembl chr 8:63,338,150...63,438,905
JBrowse link
G Plk1 polo-like kinase 1 involved_in ISO
ISS
IEA
(PMID:19473992)
GO_REF:0000024
GO_REF:0000107
RGD
UniProt
Ensembl
PMID:19473992 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:176,716,420...176,726,400
Ensembl chr 1:176,716,420...176,726,400
JBrowse link
G Plk2 polo-like kinase 2 IMP RGD PMID:18723513 RGD:7241135 NCBI chr 2:41,969,176...41,974,945
Ensembl chr 2:41,969,176...41,974,947
JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in ISO
IEA
(PMID:17030191)
GO_REF:0000107
RGD
Ensembl
PMID:17030191 GO_REF:0000107 NCBI chr 7:124,639,142...124,735,027
Ensembl chr 7:124,639,142...124,658,113
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in IBA
ISO
PMID:21873635
(MGI:5543313|PMID:23858059)
RGD PMID:23858059 PMID:21873635 MGI:5543313, RGD:13792537 NCBI chr 1:48,688,651...49,882,520 JBrowse link
G Psen1 presenilin 1 involved_in ISO (MGI:4887523|PMID:20208556) RGD PMID:20208556 MGI:4887523 NCBI chr 6:103,323,014...103,375,088
Ensembl chr 6:103,323,120...103,371,650
JBrowse link
G Psen2 presenilin 2 involved_in ISO (MGI:4887523|PMID:20208556) RGD PMID:20208556 MGI:4887523 NCBI chr13:91,967,506...91,993,240
Ensembl chr13:91,967,983...91,993,174
JBrowse link
G Psmd10 proteasome 26S subunit, non-ATPase 10 involved_in ISO
IEA
ISS
(PMID:16023600)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:16023600 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:104,656,809...104,665,126 JBrowse link
G Rack1 receptor for activated C kinase 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:19785988)
UniProt
RGD
PMID:19785988 GO_REF:0000024 NCBI chr10:33,169,415...33,174,896
Ensembl chr10:33,169,169...33,174,975
JBrowse link
G Rad23a RAD23 homolog A, nucleotide excision repair protein involved_in ISO (PMID:26296656) RGD PMID:26296656 NCBI chr19:23,313,563...23,320,702
Ensembl chr19:23,314,797...23,320,695
JBrowse link
G Rbx1 ring-box 1 involved_in ISO UniProtKB:Q7L5Y6 (PMID:14739464) RGD PMID:14739464 NCBI chr 7:112,976,863...113,001,051
Ensembl chr 7:112,990,835...113,001,051
JBrowse link
G Rchy1 ring finger and CHY zinc finger domain containing 1 involved_in ISO (PMID:19483087) RGD PMID:19483087 NCBI chr14:16,113,263...16,129,017
Ensembl chr14:16,113,224...16,129,167
JBrowse link
G Rnf14 ring finger protein 14 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:30,131,627...30,155,686
Ensembl chr18:30,131,691...30,155,685
JBrowse link
G Rnf144a ring finger protein 144A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:42,899,767...43,019,769
Ensembl chr 6:42,903,174...43,020,012
JBrowse link
G Rnf144b ring finger protein 144B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:17,431,271...17,580,687
Ensembl chr17:17,432,786...17,562,760
JBrowse link
G Rnf180 ring finger protein 180 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3819024|PMID:18363970), (MGI:5505713|PMID:23926250)
RGD PMID:18363970 PMID:23926250 PMID:21873635 MGI:3819024 MGI:5505713, RGD:13792537 NCBI chr 2:36,330,285...36,511,168
Ensembl chr 2:36,330,292...36,512,614
JBrowse link
G Rnf19a ring finger protein 19A, RBR E3 ubiquitin protein ligase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:67,425,833...67,465,214
Ensembl chr 7:67,425,837...67,465,222
JBrowse link
G Rnf19b ring finger protein 19B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:141,406,085...141,431,380
Ensembl chr 5:141,406,118...141,431,380
JBrowse link
G Rnf217 ring finger protein 217 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:26,016,668...26,108,736
Ensembl chr 1:26,015,728...26,108,736
JBrowse link
G Sh3rf2 SH3 domain containing ring finger 2 involved_in IMP
ISO
PMID:22128169
(PMID:22128169)
RGD PMID:22128169 PMID:22128169 RGD:13673844 NCBI chr18:34,045,715...34,148,342
Ensembl chr18:34,046,879...34,146,856
JBrowse link
G Sirt2 sirtuin 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(MGI:5574427|PMID:24681946)
UniProt
Ensembl
RGD
PMID:24681946 GO_REF:0000024 GO_REF:0000107 MGI:5574427 NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975
JBrowse link
G Smad7 SMAD family member 7 involved_in ISO
IEA
(PMID:11278251)
GO_REF:0000107
RGD
Ensembl
PMID:11278251 GO_REF:0000107 NCBI chr18:68,988,429...69,016,774
Ensembl chr18:68,988,429...69,016,765
JBrowse link
G Socs5 suppressor of cytokine signaling 5 involved_in ISO (PMID:15590694) RGD PMID:15590694 NCBI chr 6:7,481,039...7,512,644
Ensembl chr 6:7,481,095...7,514,834
JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in ISO (PMID:11146632) RGD PMID:11146632 NCBI chr10:14,850,765...14,853,046
Ensembl chr10:14,850,765...14,853,046
JBrowse link
G Sumo1 small ubiquitin-like modifier 1 involved_in ISO (PMID:18408734) RGD PMID:18408734 NCBI chr 9:61,078,790...61,108,697
Ensembl chr 9:61,077,435...61,108,761
JBrowse link
G Sumo2 small ubiquitin-like modifier 2 involved_in ISO (PMID:18408734) RGD PMID:18408734 NCBI chr10:100,771,941...100,784,503 JBrowse link
G Taf1 TATA-box binding protein associated factor 1 involved_in ISO (PMID:15053879) RGD PMID:15053879 NCBI chr  X:66,640,915...66,716,543
Ensembl chr  X:66,640,982...66,716,543
JBrowse link
G Trib1 tribbles pseudokinase 1 involved_in IBA
ISO
PMID:21873635
(MGI:4457446|PMID:20410507)
RGD PMID:20410507 PMID:21873635 MGI:4457446, RGD:13792537 NCBI chr 7:91,206,579...91,213,126
Ensembl chr 7:91,206,579...91,214,731
JBrowse link
G Trib2 tribbles pseudokinase 2 involved_in IBA
ISO
PMID:21873635
(MGI:4457446|PMID:20410507)
RGD PMID:20410507 PMID:21873635 MGI:4457446, RGD:13792537 NCBI chr 6:38,545,971...38,570,349
Ensembl chr 6:38,545,975...38,569,370
JBrowse link
G Trib3 tribbles pseudokinase 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:140,809,634...140,815,230
Ensembl chr 3:140,809,043...140,814,497
JBrowse link
G Ube2v2 ubiquitin conjugating enzyme E2 V2 IMP RGD PMID:12750002 RGD:1299567 NCBI chr11:85,304,528...85,338,430
Ensembl chr11:85,304,526...85,336,369
JBrowse link
G Usp5 ubiquitin specific peptidase 5 involved_in ISO (PMID:19098288) RGD PMID:19098288 NCBI chr 4:157,619,643...157,634,711
Ensembl chr 4:157,619,643...157,634,711
JBrowse link
G Vcp valosin-containing protein involved_in ISO (PMID:9452483) RGD PMID:9452483 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571
JBrowse link
G Zer1 zyg-11 related, cell cycle regulator involved_in ISO (PMID:31273098) RGD PMID:31273098 NCBI chr 3:13,369,688...13,397,524
Ensembl chr 3:13,369,688...13,397,420
JBrowse link
G Zfand2a zinc finger AN1-type containing 2A acts_upstream_of_or_within ISO MGI:3664591 (MGI:3663213|PMID:16973439) RGD PMID:16973439 MGI:3663213 NCBI chr12:15,161,601...15,172,679
Ensembl chr12:15,161,639...15,172,677
JBrowse link
G Zyg11b zyg-11 family member B, cell cycle regulator involved_in ISO (PMID:31273098) RGD PMID:31273098 NCBI chr 5:122,985,548...123,042,735
Ensembl chr 5:122,992,147...123,042,736
JBrowse link
positive regulation of proteasomal ubiquitin-dependent protein catabolic process involved in cellular response to hypoxia term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plk3 polo-like kinase 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:20889502)
UniProt
RGD
PMID:20889502 GO_REF:0000024 NCBI chr 5:130,607,142...130,612,317
Ensembl chr 5:130,607,142...130,612,317
JBrowse link
G Sirt2 sirtuin 2 involved_in ISO
ISS
(PMID:24681946)
GO_REF:0000024
RGD
UniProt
PMID:24681946 GO_REF:0000024 NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975
JBrowse link
positive regulation of protein catabolic process in the vacuole term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd81 Cd81 molecule involved_in ISO
IEA
(PMID:25635054)
GO_REF:0000107
RGD
Ensembl
PMID:25635054 GO_REF:0000107 NCBI chr 1:198,235,861...198,251,660
Ensembl chr 1:198,241,484...198,251,660
JBrowse link
positive regulation of proteolysis involved in cellular protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp5if1 ATP synthase inhibitory factor subunit 1 involved_in ISO (PMID:24005319) RGD PMID:24005319 NCBI chr 5:144,738,950...144,742,668
Ensembl chr 5:144,738,950...144,742,668
JBrowse link
G Ctsc cathepsin C involved_in IDA PMID:18307834 ParkinsonsUK-UCL PMID:18307834 RGD:8661625 NCBI chr 1:142,028,386...142,059,841
Ensembl chr 1:142,028,392...142,060,387
JBrowse link
G Gba glucosylceramidase beta involved_in ISO (PMID:21700325)
(MGI:5141165|PMID:21700325)
RGD PMID:21700325 MGI:5141165 NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263
JBrowse link
G Laptm5 lysosomal protein transmembrane 5 involved_in ISO (MGI:5444793|PMID:22949502) RGD PMID:22949502 MGI:5444793 NCBI chr 5:143,087,759...143,109,807
Ensembl chr 5:143,087,759...143,109,807
JBrowse link
G Rgn regucalcin IDA RGD PMID:1513338 RGD:9590188 NCBI chr  X:1,619,030...1,634,456
Ensembl chr  X:1,619,032...1,634,450
JBrowse link
positive regulation of retrograde protein transport, ER to cytosol term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcap31 B-cell receptor-associated protein 31 involved_in ISO (PMID:18555783) RGD PMID:18555783 NCBI chr  X:151,397,567...151,429,666
Ensembl chr  X:151,397,576...151,428,506
JBrowse link
G Edem1 ER degradation enhancing alpha-mannosidase like protein 1 involved_in ISO UniProtKB:Q9BV94 (PMID:24200403)
(MGI:5563002|PMID:24200403)
RGD PMID:24200403 MGI:5563002 NCBI chr 4:141,797,631...141,829,717
Ensembl chr 4:141,797,701...141,829,717
JBrowse link
G Edem2 ER degradation enhancing alpha-mannosidase like protein 2 involved_in ISO UniProtKB:Q92611 (PMID:24200403)
(MGI:5563002|PMID:24200403)
RGD PMID:24200403 MGI:5563002 NCBI chr 3:144,201,604...144,227,423
Ensembl chr 3:144,201,605...144,227,485
JBrowse link
positive regulation of transcription factor catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbxw8 F-box and WD repeat domain containing 8 involved_in ISO (MGI:6148490|PMID:29153991) RGD PMID:29153991 MGI:6148490 NCBI chr12:38,426,443...38,518,712
Ensembl chr12:38,426,444...38,516,424
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 involved_in ISO (MGI:6148490|PMID:29153991) RGD PMID:29153991 MGI:6148490 NCBI chr16:8,638,897...8,721,960
Ensembl chr16:8,638,924...8,721,981
JBrowse link
G Mapk9 mitogen-activated protein kinase 9 involved_in IEA
ISO
GO_REF:0000107
(MGI:6148490|PMID:29153991)
Ensembl
RGD
PMID:29153991 GO_REF:0000107 MGI:6148490 NCBI chr10:34,169,661...34,211,138
Ensembl chr10:34,169,675...34,210,178
JBrowse link
G Sirt6 sirtuin 6 involved_in ISO (PMID:27457971) RGD PMID:27457971 NCBI chr 7:8,082,312...8,087,776
Ensembl chr 7:8,082,364...8,098,914
JBrowse link
positive regulation of ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agbl4 AGBL carboxypeptidase 4 acts_upstream_of_or_within ISO MGI:5788002 (MGI:6149282|PMID:29593216) RGD PMID:29593216 MGI:6149282 NCBI chr 5:125,254,963...126,534,367 JBrowse link
G Agtpbp1 ATP/GTP binding carboxypeptidase 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr17:5,120,540...5,238,874
Ensembl chr17:5,120,609...5,238,869
JBrowse link
G Axin1 axin 1 involved_in
acts_upstream_of_or_within
IDA
ISO
PMID:10228155
(MGI:3628833|PMID:16601693)
RGD PMID:16601693 PMID:10228155 MGI:3628833, RGD:8553327 NCBI chr10:15,163,684...15,215,615
Ensembl chr10:15,163,684...15,215,615
JBrowse link
G Ccdc22 coiled-coil domain containing 22 involved_in IBA
ISO
PMID:21873635
(PMID:23563313)
RGD PMID:23563313 PMID:21873635 RGD:13792537 NCBI chr  X:14,898,296...14,910,244
Ensembl chr  X:14,898,296...14,910,244
JBrowse link
G Cdk5rap3 CDK5 regulatory subunit associated protein 3 NOT|involved_in ISS
ISO
GO_REF:0000024
(PMID:16173922)
UniProt
RGD
PMID:16173922 GO_REF:0000024 NCBI chr10:81,894,393...81,903,581
Ensembl chr10:81,894,393...81,903,590
JBrowse link
G Clu clusterin involved_in ISS
ISO
GO_REF:0000024
(PMID:20068069)
UniProt
RGD
PMID:20068069 GO_REF:0000024 NCBI chr15:40,161,068...40,200,315
Ensembl chr15:40,174,617...40,200,315
JBrowse link
G Disc1 DISC1 scaffold protein acts_upstream_of_or_within ISO (MGI:4837265|PMID:20880836) RGD PMID:20880836 MGI:4837265 NCBI chr19:53,014,201...53,223,617
Ensembl chr19:53,014,616...53,219,778
JBrowse link
G Egf epidermal growth factor involved_in ISO (MGI:4887523|PMID:20208556) RGD PMID:20208556 MGI:4887523 NCBI chr 2:218,219,408...218,302,370
Ensembl chr 2:218,219,415...218,302,064
JBrowse link
G Fbxo22 F-box protein 22 acts_upstream_of_or_within ISO (MGI:3840749|PMID:19319192) RGD PMID:19319192 MGI:3840749 NCBI chr 8:55,579,906...55,595,981
Ensembl chr 8:55,579,891...55,596,148
JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in ISO
ISS
(PMID:20208556), (PMID:27238018)
(MGI:6282935|PMID:27238018)
GO_REF:0000024
RGD
UniProt
PMID:20208556 PMID:27238018 GO_REF:0000024 MGI:6282935 NCBI chr 2:170,150,552...170,310,698
Ensembl chr 2:170,149,694...170,309,941
JBrowse link
G Laptm5 lysosomal protein transmembrane 5 involved_in ISO (MGI:3803048|PMID:18619870), (MGI:6478861|PMID:24638062) RGD PMID:18619870 PMID:24638062 MGI:3803048 MGI:6478861 NCBI chr 5:143,087,759...143,109,807
Ensembl chr 5:143,087,759...143,109,807
JBrowse link
G Pten phosphatase and tensin homolog involved_in ISO (PMID:21241890) RGD PMID:21241890 NCBI chr 1:230,631,303...230,696,754
Ensembl chr 1:230,630,338...230,696,838
JBrowse link
G Ptk2 protein tyrosine kinase 2 involved_in ISS
ISO
GO_REF:0000024
(MGI:5306293|PMID:18206965)
UniProt
RGD
PMID:18206965 GO_REF:0000024 MGI:5306293 NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783
JBrowse link
G Ptk2b protein tyrosine kinase 2 beta involved_in ISS
ISO
GO_REF:0000024
(MGI:4453113|PMID:19880522)
UniProt
RGD
PMID:19880522 GO_REF:0000024 MGI:4453113 NCBI chr15:40,360,722...40,481,235
Ensembl chr15:40,360,723...40,481,282
JBrowse link
G Rnf139 ring finger protein 139 involved_in ISO (PMID:25239945) RGD PMID:25239945 NCBI chr 7:90,439,726...90,450,911
Ensembl chr 7:90,436,621...90,488,009
JBrowse link
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 involved_in ISO (PMID:21454619) RGD PMID:21454619 NCBI chr12:9,635,009...9,726,520
Ensembl chr12:9,635,025...9,726,519
JBrowse link
G Sumo3 small ubiquitin-like modifier 3 acts_upstream_of_or_within ISO (MGI:3813414|PMID:18644859) RGD PMID:18644859 MGI:3813414 NCBI chr20:11,010,140...11,020,850
Ensembl chr20:11,010,166...11,020,696
JBrowse link
G Trim67 tripartite motif-containing 67 acts_upstream_of_or_within ISO (MGI:5427306|PMID:22337885) RGD PMID:22337885 MGI:5427306 NCBI chr19:52,763,991...52,805,906
Ensembl chr19:52,764,387...52,800,422
JBrowse link
G Vcp valosin-containing protein IMP RGD PMID:16103111 RGD:1599730 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571
JBrowse link
prenylated protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pcyox1 prenylcysteine oxidase 1 involved_in ISO
IBA
(PMID:10585463)
PMID:21873635
RGD PMID:10585463 PMID:21873635 RGD:13792537 NCBI chr 4:118,832,114...118,842,951
Ensembl chr 4:118,830,638...118,842,951
JBrowse link
G Pcyox1l prenylcysteine oxidase 1 like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:55,150,637...55,161,334
Ensembl chr18:55,150,650...55,161,327
JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO (MGI:2137968|PMID:11399759) RGD PMID:11399759 MGI:2137968 NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110
JBrowse link
proteasomal protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07053749.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Ate1 arginyltransferase 1 acts_upstream_of_or_within ISO (PMID:25970626) RGD PMID:25970626 NCBI chr 1:184,961,548...185,081,112
Ensembl chr 1:184,963,562...185,080,908
JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISO
ISS
(PMID:26565908)
GO_REF:0000024
RGD
UniProt
PMID:26565908 GO_REF:0000024 NCBI chr20:3,675,938...3,690,414
Ensembl chr20:3,675,938...3,688,657
JBrowse link
G Cul4b cullin 4B acts_upstream_of_or_within ISO (PMID:25970626) RGD PMID:25970626 NCBI chr  X:117,287,481...117,326,688
Ensembl chr  X:117,287,484...117,326,688
JBrowse link
G Ddb1 damage-specific DNA binding protein 1 acts_upstream_of_or_within ISO (PMID:25970626) RGD PMID:25970626 NCBI chr 1:207,252,890...207,278,685
Ensembl chr 1:207,252,890...207,278,676
JBrowse link
G Ddi1 DNA-damage inducible 1 homolog 1 involved_in ISO
ISS
(PMID:29290612)
GO_REF:0000024
RGD
UniProt
PMID:29290612 GO_REF:0000024 NCBI chr 8:3,596,658...3,598,505
Ensembl chr 8:3,595,149...3,598,533
JBrowse link
G Ddi2 DNA damage inducible 1 homolog 2 involved_in ISO (PMID:29290612) RGD PMID:29290612 NCBI chr 5:153,989,596...154,035,342
Ensembl chr 5:153,995,589...154,035,283
JBrowse link
G Fbxo44 F-box protein 44 acts_upstream_of_or_within ISO (PMID:25970626) RGD PMID:25970626 NCBI chr 5:158,583,363...158,592,510
Ensembl chr 5:158,583,366...158,592,363
JBrowse link
G LOC100360846 proteasome subunit beta type 6-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:93,833,914...93,834,630
Ensembl chr 2:93,833,830...93,834,635
JBrowse link
G Marchf6 membrane associated ring-CH-type finger 6 involved_in ISO (PMID:15673284) RGD PMID:15673284 NCBI chr 2:82,455,686...82,532,917
Ensembl chr 2:82,455,689...82,532,910
JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:3785131|PMID:18227153), (MGI:5303043|PMID:21874017)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:18227153 PMID:21874017 GO_REF:0000024 GO_REF:0000107 MGI:3785131 MGI:5303043 NCBI chr10:83,728,348...83,735,562
Ensembl chr10:83,728,318...83,735,705
JBrowse link
G Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 involved_in ISO (PMID:15901672) RGD PMID:15901672 NCBI chr18:59,986,187...59,990,174
Ensembl chr18:59,986,017...59,992,429
JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO MGI:2447704 (MGI:3575390|PMID:14627652) RGD PMID:14627652 MGI:3575390 NCBI chr10:47,795,709...47,825,715
Ensembl chr10:47,795,709...47,825,714
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO (PMID:19725078) RGD PMID:19725078 NCBI chr 1:48,688,651...49,882,520 JBrowse link
G Prpf19 pre-mRNA processing factor 19 involved_in ISS
ISO
GO_REF:0000024
(MGI:5586800|PMID:17349974)
(PMID:17349974)
UniProt
RGD
PMID:17349974 GO_REF:0000024 MGI:5586800 NCBI chr 1:207,541,582...207,552,664
Ensembl chr 1:207,541,595...207,552,662
JBrowse link
G Psma1 proteasome 20S subunit alpha 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:168,442,421...168,453,440
Ensembl chr 1:168,440,936...168,453,472
JBrowse link
G Psma2 proteasome 20S subunit alpha 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:50,554,536...50,564,923
Ensembl chr17:50,551,924...50,564,938
JBrowse link
G Psma3 proteasome 20S subunit alpha 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:89,483,741...89,503,775
Ensembl chr 6:89,483,727...89,504,965
JBrowse link
G Psma3l proteasome subunit alpha type 3-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Psma4 proteasome 20S subunit alpha 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:55,340,431...55,347,893
Ensembl chr 8:55,340,386...55,347,890
JBrowse link
G Psma5 proteasome 20S subunit alpha 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:195,896,369...195,919,733
Ensembl chr 2:195,896,365...195,919,731
JBrowse link
G Psma6 proteasome 20S subunit alpha 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:72,765,534...72,796,554
Ensembl chr 6:72,765,473...72,796,554
JBrowse link
G Psma7 proteasome 20S subunit alpha 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:167,137,279...167,143,626
Ensembl chr 3:167,137,263...167,143,672
JBrowse link
G Psma8 proteasome 20S subunit alpha 8 involved_in ISO
IBA
(MGI:6362274|PMID:31358751)
PMID:21873635
RGD PMID:31358751 PMID:21873635 MGI:6362274, RGD:13792537 NCBI chr18:5,863,594...5,928,226
Ensembl chr18:5,863,608...5,928,226
JBrowse link
G Psmb1 proteasome 20S subunit beta 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:56,442,432...56,463,544
Ensembl chr 1:56,420,618...56,463,560
JBrowse link
G Psmb10 proteasome 20S subunit beta 10 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:33,830,958...33,833,442 JBrowse link
G Psmb11 proteasome subunit beta 11 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:28,081,148...28,087,326 JBrowse link
G Psmb2 proteasome 20S subunit beta 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:138,970,564...139,002,715
Ensembl chr 5:138,970,533...139,021,137
JBrowse link
G Psmb3 proteasome 20S subunit beta 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:82,697,425...82,704,521
Ensembl chr10:82,697,425...82,704,521
JBrowse link
G Psmb4 proteasome 20S subunit beta 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:182,442,757...182,445,532
Ensembl chr 2:182,442,756...182,445,746
JBrowse link
G Psmb5 proteasome 20S subunit beta 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:28,072,772...28,077,367
Ensembl chr15:28,072,781...28,077,440
JBrowse link
G Psmb6 proteasome 20S subunit beta 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:55,239,274...55,241,581
Ensembl chr10:55,239,241...55,241,586
JBrowse link
G Psmb7 proteasome 20S subunit beta 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:22,357,777...22,417,748
Ensembl chr 3:22,354,698...22,417,937
JBrowse link
G Psmb8 proteasome 20S subunit beta 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:4,652,159...4,655,122
Ensembl chr20:4,652,159...4,655,283
JBrowse link
G Psmb9 proteasome 20S subunit beta 9 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:4,667,044...4,672,512
Ensembl chr20:4,666,046...4,672,512
JBrowse link
G RGD1564425 similar to Proteasome subunit beta type 3 (Proteasome theta chain) involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:118,672,316...118,672,933
Ensembl chr 3:118,672,233...118,672,933
JBrowse link
G Rnf41 ring finger protein 41 involved_in ISO (PMID:18541373) RGD PMID:18541373 NCBI chr 7:838,160...876,869
Ensembl chr 7:838,203...865,511
JBrowse link
G Socs6 suppressor of cytokine signaling 6 acts_upstream_of_or_within ISO (PMID:20007709) RGD PMID:20007709 NCBI chr18:82,111,866...82,139,193
Ensembl chr18:82,111,827...82,139,219
JBrowse link
G Vcp valosin-containing protein involved_in ISS
ISO
GO_REF:0000024
(PMID:26565908)
UniProt
RGD
PMID:26565908 GO_REF:0000024 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571
JBrowse link
G Vhl von Hippel-Lindau tumor suppressor acts_upstream_of_or_within ISO (MGI:3818351|PMID:17981124) RGD PMID:17981124 MGI:3818351 NCBI chr 4:146,772,483...146,779,376
Ensembl chr 4:146,772,468...146,779,377
JBrowse link
proteasomal ubiquitin-independent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enc1 ectodermal-neural cortex 1 involved_in ISO
IBA
(PMID:19424503)
PMID:21873635
RGD PMID:19424503 PMID:21873635 RGD:13792537 NCBI chr 2:28,550,670...28,562,591
Ensembl chr 2:28,550,464...28,562,713
JBrowse link
G Nfe2l2 nuclear factor, erythroid 2-like 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:19424503)
UniProt
RGD
PMID:19424503 GO_REF:0000024 NCBI chr 3:60,594,239...60,621,785
Ensembl chr 3:60,594,242...60,621,737
JBrowse link
G Psme4 proteasome activator subunit 4 involved_in IBA
ISO
PMID:21873635
(MGI:5494329|PMID:23706739)
RGD PMID:23706739 PMID:21873635 MGI:5494329, RGD:13792537 NCBI chr14:104,505,716...104,609,410
Ensembl chr14:104,505,716...104,609,408
JBrowse link
proteasome-mediated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07012384.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AABR07012426.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 2:180,190,557...180,217,844 JBrowse link
G AABR07041109.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr  X:111,788,220...111,788,672 JBrowse link
G AABR07053749.1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002
G Agap3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3616374|PMID:16461359)
RGD PMID:16461359 PMID:21873635 MGI:3616374, RGD:13792537 NCBI chr 4:10,674,064...10,724,848
Ensembl chr 4:10,674,064...10,725,244
JBrowse link
G Ankrd9 ankyrin repeat domain 9 involved_in ISO (PMID:30293565) RGD PMID:30293565 NCBI chr 6:130,001,914...130,008,792
Ensembl chr 6:129,998,486...130,008,923
JBrowse link
G Ap1s1 adaptor related protein complex 1 subunit sigma 1 involved_in ISS
IBA
GO_REF:0000024
PMID:21873635
UniProt PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr12:19,625,267...19,635,792
Ensembl chr12:19,625,332...19,756,713
JBrowse link
G Appbp2 amyloid beta precursor protein binding protein 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:26138980)
UniProt
RGD
PMID:26138980 GO_REF:0000024 NCBI chr10:70,057,774...70,099,877
Ensembl chr10:70,057,774...70,099,835
JBrowse link
G Arel1 apoptosis resistant E3 ubiquitin protein ligase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:104,560,556...104,617,712
Ensembl chr 6:104,564,986...104,617,628
JBrowse link
G Armc8 armadillo repeat containing 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:100,036,946...100,131,544
Ensembl chr 8:100,036,946...100,131,520
JBrowse link
G Arntl aryl hydrocarbon receptor nuclear translocator-like involved_in ISS
ISO
GO_REF:0000024
(MGI:5495336|PMID:23395176)
UniProt
RGD
PMID:23395176 GO_REF:0000024 MGI:5495336 NCBI chr 1:167,331,756...167,430,235
Ensembl chr 1:167,331,633...167,430,231
JBrowse link
G Arrb1 arrestin, beta 1 involved_in ISO (PMID:15878855) RGD PMID:15878855 NCBI chr 1:153,837,964...153,912,111
Ensembl chr 1:153,838,078...153,904,061
JBrowse link
G Arrb2 arrestin, beta 2 involved_in ISO (PMID:15878855) RGD PMID:15878855 NCBI chr10:55,146,887...55,154,854
Ensembl chr10:55,146,818...55,154,850
JBrowse link
G Asb2 ankyrin repeat and SOCS box-containing 2 involved_in ISO
ISS
(PMID:21119685)
(MGI:5510317|PMID:23632887), (MGI:6718235|PMID:29374072)
GO_REF:0000024
RGD
UniProt
PMID:21119685 PMID:23632887 PMID:29374072 GO_REF:0000024 MGI:5510317 MGI:6718235 NCBI chr 6:122,474,754...122,511,014
Ensembl chr 6:122,474,756...122,510,854
JBrowse link
G Atxn3 ataxin 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:5318000|PMID:21855799)
UniProt
RGD
PMID:21855799 GO_REF:0000024 MGI:5318000 NCBI chr 6:121,072,228...121,107,902
Ensembl chr 6:121,074,448...121,107,902
JBrowse link
G Bag6 BAG cochaperone 6 involved_in ISO (MGI:5780912|PMID:26692333) RGD PMID:26692333 MGI:5780912 NCBI chr20:3,675,938...3,690,414
Ensembl chr20:3,675,938...3,688,657
JBrowse link
G Bfar bifunctional apoptosis regulator involved_in IBA
ISO
PMID:21873635
(PMID:21068390)
RGD PMID:21068390 PMID:21873635 RGD:13792537 NCBI chr10:1,552,019...1,585,040
Ensembl chr10:1,552,072...1,585,038
JBrowse link
G Birc2 baculoviral IAP repeat-containing 2 involved_in ISO (PMID:11907583) RGD PMID:11907583 NCBI chr 8:4,968,856...4,989,325
Ensembl chr 8:4,968,842...4,988,732
JBrowse link
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase involved_in ISO (PMID:15917222) RGD PMID:15917222 NCBI chr 1:244,210,299...244,380,126
Ensembl chr 1:244,210,314...244,376,721
JBrowse link
G Cd2ap CD2-associated protein IDA RGD PMID:15001553 RGD:1302417 NCBI chr 9:18,086,744...18,182,744
Ensembl chr 9:18,086,984...18,182,199
JBrowse link
G Cdc34 cell division cycle 34, ubiqiutin conjugating enzyme involved_in ISO (PMID:10373550), (PMID:20347421) RGD PMID:10373550 PMID:20347421 NCBI chr 7:10,017,588...10,023,586
Ensembl chr 7:10,017,588...10,023,186
JBrowse link
G Clock clock circadian regulator involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:5495336|PMID:23395176)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:23395176 GO_REF:0000024 GO_REF:0000107 MGI:5495336 NCBI chr14:31,908,542...31,992,673
Ensembl chr14:31,908,566...31,990,400
JBrowse link
G Cop1 COP1, E3 ubiquitin ligase involved_in ISO (PMID:14739464) RGD PMID:14739464 NCBI chr13:71,467,164...71,561,826
Ensembl chr13:71,429,961...71,538,890
JBrowse link
G Crbn cereblon involved_in ISS
ISO
GO_REF:0000024
(PMID:20223979)
UniProt
RGD
PMID:20223979 GO_REF:0000024 NCBI chr 4:139,701,154...139,719,949
Ensembl chr 4:139,701,094...139,719,938
JBrowse link
G Ctnnb1 catenin beta 1 involved_in ISO
IEA
(PMID:29374064)
GO_REF:0000107
RGD
Ensembl
PMID:29374064 GO_REF:0000107 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111
JBrowse link
G Cul3 cullin 3 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:19261606), (PMID:19782033), (PMID:20389280), (PMID:25684205)
MGI:1343085 (MGI:4836774|PMID:20811152)
UniProt
RGD
PMID:19261606 PMID:19782033 PMID:20389280 PMID:20811152 PMID:25684205 GO_REF:0000024 MGI:4836774 NCBI chr 9:81,592,641...81,670,428
Ensembl chr 9:81,592,641...81,670,462
JBrowse link
G Cul4a cullin 4A involved_in
acts_upstream_of_or_within
ISO (PMID:14739464)
(MGI:3777067|PMID:16467204)
RGD PMID:14739464 PMID:16467204 MGI:3777067 NCBI chr16:76,385,298...76,422,316
Ensembl chr16:76,384,546...76,422,330
JBrowse link
G Dcaf11 DDB1 and CUL4 associated factor 11 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:29,046,744...29,057,450
Ensembl chr15:29,046,826...29,057,669
JBrowse link
G Ddb1 damage-specific DNA binding protein 1 involved_in ISO
IEA
ISS
IBA
(PMID:14739464), (PMID:20223979)
GO_REF:0000104
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:14739464 PMID:20223979 PMID:21873635 GO_REF:0000024 GO_REF:0000104, RGD:13792537 NCBI chr 1:207,252,890...207,278,685
Ensembl chr 1:207,252,890...207,278,676
JBrowse link
G Ddit3 DNA-damage inducible transcript 3 involved_in ISO
IEA
ISS
(PMID:17872950)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:17872950 GO_REF:0000024 GO_REF:0000107 NCBI chr 7:63,115,645...63,121,203
Ensembl chr 7:63,116,380...63,121,201
JBrowse link
G Derl1 derlin 1 involved_in ISO (MGI:5780912|PMID:26692333) RGD PMID:26692333 MGI:5780912 NCBI chr 7:89,404,413...89,427,095
Ensembl chr 7:89,404,417...89,427,145
JBrowse link
G Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 involved_in ISO (PMID:21625540) RGD PMID:21625540 NCBI chr 9:76,731,060...76,739,278
Ensembl chr 9:76,731,065...76,739,277
JBrowse link
G Edem3 ER degradation enhancing alpha-mannosidase like protein 3 acts_upstream_of_or_within ISO (MGI:3654428|PMID:16431915) RGD PMID:16431915 MGI:3654428 NCBI chr13:63,858,282...63,920,538
Ensembl chr13:63,858,716...63,920,523
JBrowse link
G Epm2a EPM2A glucan phosphatase, laforin acts_upstream_of_or_within ISO MGI:2182627 (MGI:5607479|PMID:24914213) RGD PMID:24914213 MGI:5607479 NCBI chr 1:5,727,111...5,845,338
Ensembl chr 1:5,727,066...5,920,555
JBrowse link
G Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit involved_in IBA
ISO
PMID:21873635
(PMID:16751180)
RGD PMID:16751180 PMID:21873635 RGD:13792537 NCBI chr 2:39,647,393...39,686,229
Ensembl chr 2:39,647,452...39,684,859
JBrowse link
G Faf2 Fas associated factor family member 2 involved_in ISO (MGI:5780912|PMID:26692333) RGD PMID:26692333 MGI:5780912 NCBI chr17:9,947,216...9,989,474
Ensembl chr17:9,947,220...9,989,485
JBrowse link
G Fbxl17 F-box and leucine-rich repeat protein 17 involved_in ISO (PMID:30190310) RGD PMID:30190310 NCBI chr 9:102,780,573...103,206,755
Ensembl chr 9:102,782,440...103,208,950
JBrowse link
G Fbxl19 F-box and leucine-rich repeat protein 19 acts_upstream_of_or_within ISO MGI:1861437|MGI:1924375 (MGI:5437589|PMID:22660580)
(PMID:22660580)
RGD PMID:22660580 MGI:5437589 NCBI chr 1:182,356,899...182,380,839
Ensembl chr 1:182,360,830...182,380,083
JBrowse link
G Fbxl22 F-box and leucine-rich repeat protein 22 acts_upstream_of_or_within ISO (PMID:22972877) RGD PMID:22972877 NCBI chr 8:67,069,998...67,076,685
Ensembl chr 8:67,069,998...67,076,685
JBrowse link
G Fbxl3 F-box and leucine-rich repeat protein 3 involved_in ISO (MGI:3715674|PMID:17462724) RGD PMID:17462724 MGI:3715674 NCBI chr15:79,906,795...79,926,678
Ensembl chr15:79,906,795...79,927,867
JBrowse link
G Fbxo45 F-box protein 45 involved_in IBA
ISO
PMID:21873635
(MGI:4452423|PMID:19996097)
RGD PMID:19996097 PMID:21873635 MGI:4452423, RGD:13792537 NCBI chr11:68,551,430...68,567,053 JBrowse link
G Fbxw11 F-box and WD repeat domain containing 11 involved_in ISO (PMID:20347421) RGD PMID:20347421 NCBI chr10:17,232,735...17,330,584
Ensembl chr10:17,227,181...17,330,571
JBrowse link
G Fbxw5 F-box and WD repeat domain containing 5 involved_in ISO
ISS
(PMID:18381890)
GO_REF:0000024
RGD
UniProt
PMID:18381890 GO_REF:0000024 NCBI chr 3:8,322,543...8,327,092
Ensembl chr 3:8,322,543...8,327,092
JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 involved_in ISO
IBA
(PMID:25897075)
PMID:21873635
RGD PMID:25897075 PMID:21873635 RGD:13792537 NCBI chr 2:170,150,552...170,310,698
Ensembl chr 2:170,149,694...170,309,941
JBrowse link
G Fem1b fem-1 homolog B involved_in ISS
ISO
GO_REF:0000024
(PMID:24076122)
UniProt
RGD
PMID:24076122 GO_REF:0000024 NCBI chr 8:63,265,301...63,278,577
Ensembl chr 8:63,265,301...63,278,577
JBrowse link
G Fem1c fem-1 homolog C involved_in ISO (PMID:26138980) RGD PMID:26138980 NCBI chr18:39,232,900...39,258,692
Ensembl chr18:39,232,900...39,258,692
JBrowse link
G Gba glucosylceramidase beta acts_upstream_of_or_within ISO (MGI:5501380|PMID:23707074) RGD PMID:23707074 MGI:5501380 NCBI chr 2:174,609,437...174,615,457
Ensembl chr 2:174,609,403...174,618,263
JBrowse link
G Gid4 GID complex subunit 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:45,221,210...45,247,627
Ensembl chr10:45,245,754...45,247,621
JBrowse link
G Gid8 GID complex subunit 8 homolog involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:167,826,006...167,836,759
Ensembl chr 3:167,826,060...167,834,814
JBrowse link
G Gsk3a glycogen synthase kinase 3 alpha involved_in ISS
ISO
GO_REF:0000024
(MGI:5514334|PMID:16543145)
UniProt
RGD
PMID:16543145 GO_REF:0000024 MGI:5514334 NCBI chr 1:80,815,843...80,825,732
Ensembl chr 1:80,815,850...80,825,802
JBrowse link
G Hace1 HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr20:49,035,312...49,151,103
Ensembl chr20:49,035,648...49,151,103
JBrowse link
G Hectd3 HECT domain E3 ubiquitin protein ligase 3 involved_in ISO (PMID:18194665) RGD PMID:18194665 NCBI chr 5:130,469,841...130,479,802
Ensembl chr 5:130,469,840...130,478,561
JBrowse link
G Hecw1 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:50,671,239...51,084,536
Ensembl chr17:50,670,954...51,080,720
JBrowse link
G Hecw2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:55,359,462...55,753,106
Ensembl chr 9:55,365,203...55,580,327
JBrowse link
G Herc2 HECT and RLD domain containing E3 ubiquitin protein ligase 2 involved_in ISO (MGI:5780912|PMID:26692333) RGD PMID:26692333 MGI:5780912 NCBI chr 1:106,904,789...107,110,997
Ensembl chr 1:106,880,084...107,108,134
JBrowse link
G Huwe1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:20,871,278...21,001,378
Ensembl chr  X:20,873,795...21,001,262
JBrowse link
G Ifi27 interferon, alpha-inducible protein 27 involved_in ISO (PMID:27194766) RGD PMID:27194766 NCBI chr 6:122,590,461...122,596,996
Ensembl chr 6:122,590,472...122,779,294
JBrowse link
G Itch itchy E3 ubiquitin protein ligase involved_in IBA
ISO
PMID:21873635
(PMID:22009753)
RGD PMID:22009753 PMID:21873635 RGD:13792537 NCBI chr 3:143,642,348...143,733,745
Ensembl chr 3:143,645,637...143,733,543
JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISO
IEA
(PMID:18397884)
GO_REF:0000107
RGD
Ensembl
PMID:18397884 GO_REF:0000107 NCBI chr 1:202,895,751...202,903,178
Ensembl chr 1:202,895,751...202,903,458
JBrowse link
G Kat7 lysine acetyltransferase 7 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr10:80,221,519...80,255,590
Ensembl chr10:80,221,524...80,255,567
JBrowse link
G Kbtbd6 kelch repeat and BTB domain containing 6 involved_in ISO (PMID:25684205) RGD PMID:25684205 NCBI chr15:54,848,285...54,850,042
Ensembl chr15:54,848,446...54,850,453
JBrowse link
G Kbtbd7 kelch repeat and BTB domain containing 7 involved_in ISO (PMID:25684205) RGD PMID:25684205 NCBI chr15:54,806,878...54,811,457
Ensembl chr15:54,806,873...54,811,687
JBrowse link
G Kctd10 potassium channel tetramerization domain containing 10 involved_in IBA
ISS
PMID:21873635
GO_REF:0000024
UniProt PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr12:42,230,159...42,248,792
Ensembl chr12:42,230,269...42,248,783
JBrowse link
G Kctd13 potassium channel tetramerization domain containing 13 involved_in ISO (PMID:19782033) RGD PMID:19782033 NCBI chr 1:181,534,534...181,552,843
Ensembl chr 1:181,534,515...181,552,881
JBrowse link
G Kctd17 potassium channel tetramerization domain containing 17 involved_in ISO
IBA
(PMID:25270598)
PMID:21873635
RGD PMID:25270598 PMID:21873635 RGD:13792537 NCBI chr 7:109,979,060...110,009,091
Ensembl chr 7:109,979,060...110,008,927
JBrowse link
G Kctd2 potassium channel tetramerization domain containing 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:100,663,013...100,674,756
Ensembl chr10:100,662,884...100,674,336
JBrowse link
G Kctd5 potassium channel tetramerization domain containing 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:13,079,216...13,105,197
Ensembl chr10:13,079,214...13,105,209
JBrowse link
G Kif14 kinesin family member 14 involved_in ISO (PMID:24854087) RGD PMID:24854087 NCBI chr13:47,926,975...47,990,598
Ensembl chr13:47,927,044...47,989,164
JBrowse link
G Klhdc2 kelch domain containing 2 involved_in ISO
ISS
(PMID:26138980)
GO_REF:0000024
RGD
UniProt
PMID:26138980 GO_REF:0000024 NCBI chr 6:87,777,183...87,791,609
Ensembl chr 6:87,777,183...87,804,187
JBrowse link
G Klhdc3 kelch domain containing 3 involved_in ISO
ISS
(PMID:26138980)
GO_REF:0000024
RGD
UniProt
PMID:26138980 GO_REF:0000024 NCBI chr 9:14,302,345...14,308,736
Ensembl chr 9:14,302,354...14,308,736
JBrowse link
G Klhl20 kelch-like family member 20 involved_in ISO
IBA
ISS
(PMID:20389280)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:20389280 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr13:73,363,451...73,408,346
Ensembl chr13:73,363,455...73,408,337
JBrowse link
G Klhl22 kelch-like family member 22 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:29769719)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:29769719 GO_REF:0000024 GO_REF:0000107 NCBI chr11:83,190,891...83,231,746
Ensembl chr11:83,190,891...83,231,770
JBrowse link
G Klhl42 kelch-like family, member 42 involved_in ISO (PMID:19261606) RGD PMID:19261606 NCBI chr 4:179,999,655...180,027,283
Ensembl chr 4:180,004,580...180,027,283
JBrowse link
G LOC100911153 TD and POZ domain-containing protein 2-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:179,475,492...179,476,594 JBrowse link
G LOC100911679 TD and POZ domain-containing protein 2-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:179,675,178...179,676,254
Ensembl chr 2:179,475,492...179,476,586
JBrowse link
G LOC103694506 ubiquitin-conjugating enzyme E2 W involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Maea macrophage erythroblast attacher, E3 ubiquitin ligase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:77,357,261...77,390,683
Ensembl chr14:77,357,264...77,390,671
JBrowse link
G Marchf6 membrane associated ring-CH-type finger 6 involved_in ISO (PMID:24449766) RGD PMID:24449766 NCBI chr 2:82,455,686...82,532,917
Ensembl chr 2:82,455,689...82,532,910
JBrowse link
G Mta1 metastasis associated 1 involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:19805145)
Ensembl
UniProt
RGD
PMID:19805145 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:132,178,608...132,217,641
Ensembl chr 6:132,178,853...132,217,641
JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:73,384,095...73,468,951
Ensembl chr 8:73,383,695...73,468,951
JBrowse link
G Nedd4l NEDD4 like E3 ubiquitin protein ligase involved_in IBA
ISO
PMID:21873635
(PMID:21463633)
RGD PMID:21463633 PMID:21873635 RGD:13792537 NCBI chr18:58,393,759...58,726,709
Ensembl chr18:58,393,509...58,723,137
JBrowse link
G Nfe2l2 nuclear factor, erythroid 2-like 2 involved_in ISO
ISS
(PMID:15983046)
GO_REF:0000024
RGD
UniProt
PMID:15983046 GO_REF:0000024 NCBI chr 3:60,594,239...60,621,785
Ensembl chr 3:60,594,242...60,621,737
JBrowse link
G Nhlrc1 NHL repeat containing E3 ubiquitin protein ligase 1 involved_in
acts_upstream_of_or_within
IBA
ISO
ISS
PMID:21873635
MGI:3808349 (MGI:5607479|PMID:24914213)
GO_REF:0000024
(PMID:15930137)
RGD
UniProt
PMID:15930137 PMID:24914213 PMID:21873635 GO_REF:0000024 MGI:5607479, RGD:13792537 NCBI chr17:17,674,375...17,675,565
Ensembl chr17:17,674,319...17,677,148
JBrowse link
G Nhlrc3 NHL repeat containing 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:137,527,843...137,542,258
Ensembl chr 2:137,530,012...137,534,879
JBrowse link
G Nploc4 NPL4 homolog, ubiquitin recognition factor involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr10:105,654,395...105,709,958
Ensembl chr10:105,654,812...105,709,913
JBrowse link
G Nsfl1c NSFL1 cofactor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:139,978,306...140,002,876
Ensembl chr 3:139,978,301...140,002,870
JBrowse link
G Otud5 OTU deubiquitinase 5 acts_upstream_of_or_within ISO MGI:2386448|MGI:5752247 (MGI:5621075|PMID:25470037) RGD PMID:25470037 MGI:5621075 NCBI chr  X:14,626,173...14,659,331
Ensembl chr  X:14,626,164...14,659,573
JBrowse link
G Pcbp2 poly(rC) binding protein 2 involved_in ISO (PMID:19881509) RGD PMID:19881509 NCBI chr 7:133,605,480...133,631,312
Ensembl chr 7:133,605,573...133,629,863
JBrowse link
G Pcnp PEST proteolytic signal containing nuclear protein involved_in ISS
ISO
IBA
GO_REF:0000024
(PMID:14741369)
PMID:21873635
HGNC-UCL
RGD
PMID:14741369 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr11:44,592,766...44,607,372
Ensembl chr11:44,592,742...44,607,348
JBrowse link
G Peli1 pellino E3 ubiquitin protein ligase 1 involved_in ISO (PMID:29883609) RGD PMID:29883609 NCBI chr14:95,254,274...95,309,168
Ensembl chr14:95,254,589...95,308,285
JBrowse link
G Plaa phospholipase A2, activating protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:109,428,600...109,460,373
Ensembl chr 5:109,428,265...109,460,282
JBrowse link
G Pml PML nuclear body scaffold involved_in ISO (PMID:22406621) RGD PMID:22406621 NCBI chr 8:58,627,347...58,661,927
Ensembl chr 8:58,628,837...58,658,971
JBrowse link
G Pmp22 peripheral myelin protein 22 acts_upstream_of_or_within ISO MGI:1856217 (MGI:3574149|PMID:15748170) RGD PMID:15748170 MGI:3574149 NCBI chr10:47,795,709...47,825,715
Ensembl chr10:47,795,709...47,825,714
JBrowse link
G Ppp2cb protein phosphatase 2 catalytic subunit beta acts_upstream_of_or_within ISO (MGI:3694309|PMID:16717086) RGD PMID:16717086 MGI:3694309 NCBI chr16:58,558,119...58,579,325
Ensembl chr16:58,558,122...58,579,576
JBrowse link
G Ppp2r5c protein phosphatase 2, regulatory subunit B', gamma acts_upstream_of_or_within ISO (PMID:16717086) RGD PMID:16717086 NCBI chr 6:129,461,689...129,598,344
Ensembl chr 6:129,461,648...129,598,346
JBrowse link
G Prame PRAME nuclear receptor transcriptional regulator involved_in ISO (PMID:26138980) RGD PMID:26138980 NCBI chr  X:98,567,994...98,574,654
Ensembl chr  X:98,569,415...98,572,096
JBrowse link
G Pramef27 PRAME family member 27 involved_in ISO (PMID:26138980) RGD PMID:26138980 NCBI chr 5:155,752,765...155,759,663
Ensembl chr 5:155,756,015...155,759,663
JBrowse link
G Prkn parkin RBR E3 ubiquitin protein ligase involved_in ISO
ISS
(PMID:11439185), (PMID:21376232)
GO_REF:0000024
RGD
ParkinsonsUK-UCL
PMID:11439185 PMID:21376232 GO_REF:0000024 NCBI chr 1:48,688,651...49,882,520 JBrowse link
G Psma5 proteasome 20S subunit alpha 5 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:195,896,369...195,919,733
Ensembl chr 2:195,896,365...195,919,731
JBrowse link
G Psmb3 proteasome 20S subunit beta 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:82,697,425...82,704,521
Ensembl chr10:82,697,425...82,704,521
JBrowse link
G Psmb5 proteasome 20S subunit beta 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3047032|PMID:15198663)
Ensembl
RGD
PMID:15198663 GO_REF:0000107 MGI:3047032 NCBI chr15:28,072,772...28,077,367
Ensembl chr15:28,072,781...28,077,440
JBrowse link
G Psmc5 proteasome 26S subunit, ATPase 5 involved_in ISO
ISS
(PMID:12110588)
GO_REF:0000024
RGD
UniProt
PMID:12110588 GO_REF:0000024 NCBI chr10:91,187,763...91,193,697
Ensembl chr10:91,187,743...91,213,135
JBrowse link
G Psmd1 proteasome 26S subunit, non-ATPase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:86,709,714...86,785,213
Ensembl chr 9:86,709,947...86,785,211
JBrowse link
G Psmd12 proteasome 26S subunit, non-ATPase 12 involved_in ISO
IBA
PMID:21873635 RGD
GO_Central
PMID:9426256 PMID:21873635 RGD:8693626, RGD:13792537 NCBI chr10:92,438,223...92,457,323
Ensembl chr10:92,438,298...92,457,287
JBrowse link
G Psmd14 proteasome 26S subunit, non-ATPase 14 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:46,254,338...46,347,076
Ensembl chr 3:46,254,330...46,347,076
JBrowse link
G Psmd2 proteasome 26S subunit ubiquitin receptor, non-ATPase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:80,248,364...80,258,991
Ensembl chr11:80,248,364...80,259,043
JBrowse link
G Psmd4 proteasome 26S subunit ubiquitin receptor, non-ATPase 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:182,598,934...182,608,250
Ensembl chr 2:182,598,934...182,608,194
JBrowse link
G Psmd6 proteasome 26S subunit, non-ATPase 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:11,102,208...11,112,180
Ensembl chr15:11,102,180...11,205,620
JBrowse link
G Psmd7 proteasome 26S subunit, non-ATPase 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:35,494,317...35,501,605
Ensembl chr19:35,494,316...35,501,588
JBrowse link
G Psmd8 proteasome 26S subunit, non-ATPase 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:84,474,377...84,481,209
Ensembl chr 1:84,474,378...84,481,209
JBrowse link
G Psmf1 proteasome inhibitor subunit 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:140,235,371...140,260,546
Ensembl chr 3:140,235,373...140,260,546
JBrowse link
G Rad23a RAD23 homolog A, nucleotide excision repair protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:23,313,563...23,320,702
Ensembl chr19:23,314,797...23,320,695
JBrowse link
G Rad23b RAD23 homolog B, nucleotide excision repair protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:70,090,232...70,128,340
Ensembl chr 5:70,090,232...70,128,319
JBrowse link
G Rbck1 RANBP2-type and C3HC4-type zinc finger containing 1 involved_in IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:17449468)
Ensembl
RGD
PMID:17449468 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 3:140,789,079...140,806,017
Ensembl chr 3:140,789,080...140,806,005
JBrowse link
G Rbx1 ring-box 1 involved_in ISO (PMID:20389280) RGD PMID:20389280 NCBI chr 7:112,976,863...113,001,051
Ensembl chr 7:112,990,835...113,001,051
JBrowse link
G Rffl ring finger and FYVE-like domain containing E3 ubiquitin protein ligase involved_in ISS
IBA
ISO
GO_REF:0000024
PMID:21873635
(PMID:18382127), (PMID:22609986)
UniProt
RGD
PMID:18382127 PMID:22609986 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:67,740,711...67,803,694
Ensembl chr10:67,740,712...67,824,434
JBrowse link
G RGD1559714 similar to TDPOZ3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:181,837,103...181,844,470
Ensembl chr 2:181,837,105...181,953,508
JBrowse link
G RGD1560510 similar to TDPOZ2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:181,807,922...181,810,233 JBrowse link
G RGD1560554 similar to TDPOZ2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:179,601,834...179,602,928 JBrowse link
G RGD1563667 similar to TDPOZ3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:181,879,563...181,953,471
Ensembl chr 2:181,879,555...182,004,263
JBrowse link
G RGD1564313 similar to TDPOZ3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:179,520,448...179,521,542 JBrowse link
G RGD1564425 similar to Proteasome subunit beta type 3 (Proteasome theta chain) involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:118,672,316...118,672,933
Ensembl chr 3:118,672,233...118,672,933
JBrowse link
G RGD1566337 similar to TDPOZ2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:179,417,655...179,418,749 JBrowse link
G Rmnd5a required for meiotic nuclear division 5 homolog A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:103,375,846...103,432,890
Ensembl chr 4:103,379,908...103,433,051
JBrowse link
G Rmnd5b required for meiotic nuclear division 5 homolog B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:35,881,250...35,892,322
Ensembl chr10:35,881,268...35,892,265
JBrowse link
G Rnf122 ring finger protein 122 involved_in ISO
IEA
(PMID:20553626)
GO_REF:0000107
RGD
Ensembl
PMID:20553626 GO_REF:0000107 NCBI chr16:61,009,879...61,027,520
Ensembl chr16:61,009,879...61,027,448
JBrowse link
G Rnf126 ring finger protein 126 involved_in ISO (PMID:24981174) RGD PMID:24981174 NCBI chr 7:9,939,359...9,946,963
Ensembl chr 7:9,938,229...9,946,738
JBrowse link
G Rnf186 ring finger protein 186 involved_in ISO
IBA
(PMID:23896122)
PMID:21873635
RGD PMID:23896122 PMID:21873635 RGD:13792537 NCBI chr 5:151,210,492...151,211,716
Ensembl chr 5:151,210,492...151,211,716
JBrowse link
G Rnf187 ring finger protein 187 involved_in ISO
ISS
(PMID:20852630)
GO_REF:0000024
RGD
UniProt
PMID:20852630 GO_REF:0000024 NCBI chr10:43,709,493...43,715,392
Ensembl chr10:43,702,357...43,716,157
JBrowse link
G Rnf216 ring finger protein 216 involved_in ISO (PMID:19893624) RGD PMID:19893624 NCBI chr12:11,454,752...11,576,305
Ensembl chr12:11,454,797...11,576,304
JBrowse link
G Rnf34 ring finger protein 34 involved_in ISO
IBA
ISS
(PMID:15069192), (PMID:22064484), (PMID:25012219)
(MGI:5582154|PMID:22064484)
PMID:21873635
GO_REF:0000024
RGD
UniProt
PMID:15069192 PMID:22064484 PMID:25012219 PMID:21873635 GO_REF:0000024 MGI:5582154, RGD:13792537 NCBI chr12:33,703,655...33,724,606
Ensembl chr12:33,703,673...33,724,586
JBrowse link
G Rnf4 ring finger protein 4 involved_in ISO
IEA
ISS
(PMID:18408734), (PMID:20212317), (PMID:20943951)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:18408734 PMID:20212317 PMID:20943951 GO_REF:0000024 GO_REF:0000107 NCBI chr14:76,401,292...76,423,270
Ensembl chr14:76,401,299...76,422,566
JBrowse link
G Sharpin SHANK-associated RH domain interactor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:108,070,681...108,075,012
Ensembl chr 7:108,070,687...108,074,955
JBrowse link
G Siah1 siah E3 ubiquitin protein ligase 1 involved_in ISS
ISO
IBA
GO_REF:0000024
(MGI:4441266|PMID:16615911)
PMID:21873635
UniProt
RGD
PMID:16615911 PMID:21873635 GO_REF:0000024 MGI:4441266, RGD:13792537 NCBI chr19:20,378,908...20,402,512
Ensembl chr19:20,378,439...20,403,808
JBrowse link
G Siah2 siah E3 ubiquitin protein ligase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:142,913,924...142,931,752
Ensembl chr 2:142,914,003...142,931,950
JBrowse link
G Siah3 siah E3 ubiquitin protein ligase family member 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:50,770,963...50,834,278
Ensembl chr15:50,770,871...50,834,487
JBrowse link
G Sirt1 sirtuin 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:21841822)
Ensembl
RGD
PMID:21841822 GO_REF:0000107 NCBI chr20:25,307,143...25,329,260
Ensembl chr20:25,306,917...25,329,260
JBrowse link
G Sirt2 sirtuin 2 involved_in ISO
ISS
(PMID:21841822)
GO_REF:0000024
RGD
UniProt
PMID:21841822 GO_REF:0000024 NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975
JBrowse link
G Skp2 S-phase kinase associated protein 2 involved_in ISO (PMID:27194766) RGD PMID:27194766 NCBI chr 2:58,161,226...58,189,293
Ensembl chr 2:58,161,229...58,189,338
JBrowse link
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 involved_in IBA
ISO
PMID:21873635
(PMID:11278251)
RGD PMID:11278251 PMID:21873635 RGD:13792537 NCBI chr12:9,635,009...9,726,520
Ensembl chr12:9,635,025...9,726,519
JBrowse link
G Smurf2 SMAD specific E3 ubiquitin protein ligase 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:91,761,798...91,862,485
Ensembl chr10:91,761,807...91,862,488
JBrowse link
G Spop speckle type BTB/POZ protein involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1347360 (MGI:4836774|PMID:20811152)
(PMID:22085717), (PMID:32109420)
RGD PMID:20811152 PMID:22085717 PMID:32109420 PMID:21873635 MGI:4836774, RGD:13792537 NCBI chr10:80,358,121...80,438,983
Ensembl chr10:80,358,124...80,483,955
JBrowse link
G Spopl speckle type BTB/POZ protein like involved_in IBA
ISO
PMID:21873635
(PMID:22632832)
RGD PMID:22632832 PMID:21873635 RGD:13792537 NCBI chr 3:6,074,681...6,148,508
Ensembl chr 3:6,078,310...6,108,794
JBrowse link
G Spsb1 splA/ryanodine receptor domain and SOCS box containing 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:160,358,292...160,418,541
Ensembl chr 5:160,358,308...160,418,468
JBrowse link
G Spsb2 splA/ryanodine receptor domain and SOCS box containing 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:157,612,921...157,615,293
Ensembl chr 4:157,613,401...157,615,284
JBrowse link
G Spsb3 splA/ryanodine receptor domain and SOCS box containing 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:13,907,175...13,912,841
Ensembl chr10:13,907,253...13,912,841
JBrowse link
G Spsb4 splA/ryanodine receptor domain and SOCS box containing 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:97,536,519...97,609,757
Ensembl chr 8:97,536,520...97,609,787
JBrowse link
G Stub1 STIP1 homology and U-box containing protein 1 involved_in ISO
IBA
(PMID:15781469), (PMID:24613385), (PMID:29883609)
(MGI:5318000|PMID:21855799)
PMID:21873635
RGD PMID:15781469 PMID:21855799 PMID:24613385 PMID:29883609 PMID:21873635 MGI:5318000, RGD:13792537 NCBI chr10:14,850,765...14,853,046
Ensembl chr10:14,850,765...14,853,046
JBrowse link
G Tbl1x transducin (beta)-like 1 X-linked acts_upstream_of_or_within ISO (MGI:3032799|PMID:14980219) RGD PMID:14980219 MGI:3032799 NCBI chr  X:41,574,558...41,731,117
Ensembl chr  X:41,576,047...41,731,101
JBrowse link
G Tbl1xr1 TBL1X receptor 1 acts_upstream_of_or_within ISO (MGI:3032799|PMID:14980219) RGD PMID:14980219 MGI:3032799 NCBI chr 2:104,788,950...104,929,055
Ensembl chr 2:104,801,721...104,929,055
JBrowse link
G Tbx21 T-box transcription factor 21 involved_in ISO (MGI:5543347|PMID:23616576) RGD PMID:23616576 MGI:5543347 NCBI chr10:82,082,322...82,098,831
Ensembl chr10:82,082,322...82,098,831
JBrowse link
G Tnfaip1 TNF alpha induced protein 1 involved_in ISO
ISS
IBA
(PMID:19782033)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:19782033 PMID:21873635 GO_REF:0000024, RGD:13792537 NCBI chr10:63,417,774...63,432,466
Ensembl chr10:63,417,775...63,432,466
JBrowse link
G Topors TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase involved_in ISO (PMID:18077445) RGD PMID:18077445 NCBI chr 5:55,388,033...55,399,937
Ensembl chr 5:55,387,632...55,399,937
JBrowse link
G Trim13 tripartite motif-containing 13 involved_in ISO (PMID:17314412) RGD PMID:17314412 NCBI chr15:35,733,548...35,772,676
Ensembl chr15:35,734,107...35,772,677
JBrowse link
G Trim2 tripartite motif-containing 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:169,500,628...169,652,855
Ensembl chr 2:169,500,634...169,652,927
JBrowse link
G Trim3 tripartite motif-containing 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:159,950,921...159,973,600
Ensembl chr 1:159,944,908...159,973,600
JBrowse link
G Trim38 tripartite motif containing 38 acts_upstream_of_or_within ISO (MGI:5441682|PMID:22539786) RGD PMID:22539786 MGI:5441682 NCBI chr17:41,351,857...41,365,021 JBrowse link
G Trim63 tripartite motif containing 63 acts_upstream_of_or_within ISO (MGI:3525851|PMID:15601779) RGD PMID:15601779 MGI:3525851 NCBI chr 5:146,533,492...146,547,332
Ensembl chr 5:146,533,507...146,547,322
JBrowse link
G Trim71 tripartite motif containing 71 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:114,193,439...114,250,807
Ensembl chr 8:114,199,187...114,250,807
JBrowse link
G Trim72 tripartite motif containing 72 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:5602876|PMID:23965929)
RGD PMID:23965929 PMID:21873635 MGI:5602876, RGD:13792537 NCBI chr 1:182,613,753...182,621,613
Ensembl chr 1:182,613,712...182,621,606
JBrowse link
G Trim9 tripartite motif-containing 9 involved_in ISS
ISO
GO_REF:0000024
(PMID:20085810)
UniProt
RGD
PMID:20085810 GO_REF:0000024 NCBI chr 6:88,756,824...88,856,588
Ensembl chr 6:88,757,303...88,856,542
JBrowse link
G Ube2a ubiquitin-conjugating enzyme E2A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr  X:116,114,339...116,125,076
Ensembl chr  X:116,113,875...116,125,070
JBrowse link
G Ube2b ubiquitin-conjugating enzyme E2B involved_in ISO
IBA
(PMID:10373550)
PMID:21873635
RGD PMID:10373550 PMID:21873635 RGD:13792537 NCBI chr10:36,248,434...36,263,379
Ensembl chr10:36,248,438...36,264,665
JBrowse link
G Ube2d3 ubiquitin-conjugating enzyme E2D 3 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(MGI:3525851|PMID:15601779)
(PMID:20347421)
UniProt
RGD
PMID:15601779 PMID:20347421 GO_REF:0000024 MGI:3525851 NCBI chr 2:223,868,397...223,899,606
Ensembl chr 2:223,868,730...223,898,081
JBrowse link
G Ube2g1 ubiquitin-conjugating enzyme E2G 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:57,225,963...57,306,748
Ensembl chr10:57,225,952...57,308,568
JBrowse link
G Ube2h ubiquitin-conjugating enzyme E2H acts_upstream_of_or_within ISO MGI:3612190 (MGI:5602876|PMID:23965929) RGD PMID:23965929 MGI:5602876 NCBI chr 4:58,834,674...58,930,156
Ensembl chr 4:58,834,674...58,930,156
JBrowse link
G Ube2i ubiquitin-conjugating enzyme E2I IMP RGD PMID:9013644 RGD:730030 NCBI chr10:14,277,749...14,294,681
Ensembl chr10:69,701,618...69,702,443
Ensembl chr10:69,701,618...69,702,443
JBrowse link
G Ube2k ubiquitin-conjugating enzyme E2K involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:42,658,016...42,718,899
Ensembl chr14:42,658,016...42,718,630
JBrowse link
G Ube2u ubiquitin conjugating enzyme E2 U involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:115,118,234...115,187,296
Ensembl chr 5:115,118,495...115,186,874
JBrowse link
G Ube2w ubiquitin-conjugating enzyme E2W involved_in ISS
ISO
IBA
GO_REF:0000024
(MGI:5318000|PMID:21855799)
PMID:21873635
UniProt
RGD
PMID:21855799 PMID:21873635 GO_REF:0000024 MGI:5318000, RGD:13792537 NCBI chr 5:2,690,742...2,754,491 JBrowse link
G Ube3d ubiquitin protein ligase E3D involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:87,245,503...87,413,104
Ensembl chr 8:87,245,589...87,413,057
JBrowse link
G Ube4b ubiquitination factor E4B acts_upstream_of_or_within ISO (PMID:23509263) RGD PMID:23509263 NCBI chr 5:159,766,829...159,870,509
Ensembl chr 5:159,766,829...159,870,509
JBrowse link
G Ubxn11 UBX domain protein 11 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:146,329,666...146,353,529
Ensembl chr 5:146,329,842...146,353,526
JBrowse link
G Ubxn2a UBX domain protein 2A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 6:27,884,253...27,912,709
Ensembl chr 6:27,884,680...27,912,649
JBrowse link
G Ubxn2b UBX domain protein 2B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:19,303,634...19,333,181
Ensembl chr 5:19,303,682...19,326,849
JBrowse link
G Usp14 ubiquitin specific peptidase 14 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr18:1,018,111...1,057,727
Ensembl chr18:1,019,400...1,057,519
JBrowse link
G Usp44 ubiquitin specific peptidase 44 involved_in ISO (MGI:5448515|PMID:21853124) RGD PMID:21853124 MGI:5448515 NCBI chr 7:28,364,169...28,412,039
Ensembl chr 7:28,364,033...28,410,053
JBrowse link
G Vcp valosin-containing protein involved_in ISS
ISO
GO_REF:0000024
(MGI:5780912|PMID:26692333)
(PMID:20104022)
UniProt
RGD
PMID:20104022 PMID:26692333 GO_REF:0000024 MGI:5780912 NCBI chr 5:57,210,167...57,229,571
Ensembl chr 5:57,210,168...57,229,571
JBrowse link
G Wwp1 WW domain containing E3 ubiquitin protein ligase 1 involved_in IBA
ISO
PMID:21873635
(MGI:4820705|PMID:19561640), (MGI:4820708|PMID:19047365)
RGD PMID:19047365 PMID:19561640 PMID:21873635 MGI:4820705 MGI:4820708, RGD:13792537 NCBI chr 5:33,092,379...33,185,887
Ensembl chr 5:33,098,494...33,186,046
JBrowse link
G Wwp2 WW domain containing E3 ubiquitin protein ligase 2 involved_in ISO
IBA
(PMID:19274063)
(MGI:4821930|PMID:19997087)
PMID:21873635
RGD PMID:19274063 PMID:19997087 PMID:21873635 MGI:4821930, RGD:13792537 NCBI chr19:35,346,826...35,471,251
Ensembl chr19:35,346,814...35,472,699
JBrowse link
G Zfand2a zinc finger AN1-type containing 2A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:15,161,601...15,172,679
Ensembl chr12:15,161,639...15,172,677
JBrowse link
G Zfand2b zinc finger AN1-type containing 2B involved_in ISO
IBA
(PMID:26692333)
PMID:21873635
(MGI:5780912|PMID:26692333)
RGD PMID:26692333 PMID:21873635 MGI:5780912, RGD:13792537 NCBI chr 9:76,665,466...76,668,447
Ensembl chr 9:76,665,546...76,668,445
JBrowse link
G Znrf1 zinc and ring finger 1 involved_in ISO (MGI:5306704|PMID:22057101) RGD PMID:22057101 MGI:5306704 NCBI chr19:39,496,886...39,581,600
Ensembl chr19:39,496,527...39,580,969
JBrowse link
G Zswim8 zinc finger, SWIM-type containing 8 involved_in ISO (PMID:33184234) RGD PMID:33184234 NCBI chr15:3,573,780...3,589,501
Ensembl chr15:3,573,780...3,589,487
JBrowse link
protein arginylation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ate1 arginyltransferase 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3587444|PMID:16002466)
RGD PMID:16002466 PMID:21873635 MGI:3587444, RGD:13792537 NCBI chr 1:184,961,548...185,081,112
Ensembl chr 1:184,963,562...185,080,908
JBrowse link
G RGD1565611 RGD1565611 involved_in IBA
ISO
PMID:21873635
(MGI:5608602|PMID:25369936)
RGD PMID:25369936 PMID:21873635 MGI:5608602, RGD:13792537 NCBI chr10:60,872,529...60,876,191
Ensembl chr10:60,872,511...60,876,204
JBrowse link
protein catabolic process in the vacuole term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 acts_upstream_of_or_within ISO MGI:1856973 (MGI:5500861|PMID:23704209) RGD PMID:23704209 MGI:5500861 NCBI chr 1:201,127,034...201,138,787
Ensembl chr 1:201,127,034...201,138,742
JBrowse link
protein deubiquitination involved in ubiquitin-dependent protein catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Otud7a OTU deubiquitinase 7A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:117,064,428...117,388,217
Ensembl chr 1:117,064,496...117,386,480
JBrowse link
G Otud7b OTU deubiquitinase 7B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:183,661,955...183,722,584
Ensembl chr 2:183,662,163...183,718,674
JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:13,709,211...13,724,291
Ensembl chr 1:13,709,206...13,725,282
JBrowse link
G Usp9x ubiquitin specific peptidase 9, X-linked involved_in ISO (PMID:29626158)
(MGI:6157201|PMID:29626158)
RGD PMID:29626158 MGI:6157201 NCBI chr  X:9,588,825...9,726,993
Ensembl chr  X:9,588,825...9,696,711
JBrowse link
G Zranb1 zinc finger RANBP2-type containing 1 involved_in ISO
IBA
(PMID:18281465)
PMID:21873635
RGD PMID:18281465 PMID:21873635 RGD:13792537 NCBI chr 1:187,725,354...187,780,129
Ensembl chr 1:187,724,320...187,779,655
JBrowse link
protein localization to cytosolic proteasome complex involved in ERAD pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atxn3 ataxin 3 involved_in ISO (PMID:17000876) RGD PMID:17000876 NCBI chr 6:121,072,228...121,107,902
Ensembl chr 6:121,074,448...121,107,902
JBrowse link
protein quality control for misfolded or incompletely synthesized proteins term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1s1 adaptor related protein complex 1 subunit sigma 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr12:19,625,267...19,635,792
Ensembl chr12:19,625,332...19,756,713
JBrowse link
G Atxn3 ataxin 3 involved_in ISS
ISO
GO_REF:0000024
(MGI:5318000|PMID:21855799)
UniProt
RGD
PMID:21855799 GO_REF:0000024 MGI:5318000 NCBI chr 6:121,072,228...121,107,902
Ensembl chr 6:121,074,448...121,107,902
JBrowse link
G Clpp caseinolytic mitochondrial matrix peptidase proteolytic subunit involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:1,831,680...1,837,700
Ensembl chr 9:1,830,311...1,837,693
JBrowse link
G Fbxl17 F-box and leucine-rich repeat protein 17 involved_in ISO (PMID:30190310) RGD PMID:30190310 NCBI chr 9:102,780,573...103,206,755
Ensembl chr 9:102,782,440...103,208,950
JBrowse link
G