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ONTOLOGY REPORT - ANNOTATIONS


Term:primary metabolic process
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Accession:GO:0044238 term browser browse the term
Definition:The chemical reactions and pathways involving those compounds which are formed as a part of the normal anabolic and catabolic processes. These processes take place in most, if not all, cells of the organism.
Synonyms:exact_synonym: primary metabolism


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'de novo' NAD biosynthetic process from tryptophan term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Afmid arylformamidase JBrowse link NW_004936594 2,794,927 2,805,689 RGD:9068941
acetyl-CoA biosynthetic process from pyruvate term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pdha2 pyruvate dehydrogenase E1 alpha 2 subunit JBrowse link NW_004936717 2,377,982 2,379,137 RGD:9068941
activation of cysteine-type endopeptidase activity involved in apoptotic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Khdc1l KH domain containing 1 like JBrowse link NW_004942018 3,096 3,557 RGD:9068941
activation of MAPK activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Drd4 dopamine receptor D4 JBrowse link NW_004936888 468,334 471,254 RGD:9068941
G Fpr1 formyl peptide receptor 1 JBrowse link NW_004937026 155,550 156,608 RGD:9068941
G Prok2 prokineticin 2 JBrowse link NW_004936603 3,299,736 3,419,539 RGD:9068941
G Sbk2 SH3 domain binding kinase family member 2 JBrowse link NW_004936886 739,863 745,971 RGD:9068941
activation of protein kinase activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sbk2 SH3 domain binding kinase family member 2 JBrowse link NW_004936886 739,863 745,971 RGD:9068941
activation of protein kinase B activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ang angiogenin JBrowse link NW_004936880 39,372 40,070 RGD:9068941
G Mt3 metallothionein 3 JBrowse link NW_004936475 8,864,512 8,866,516 RGD:9068941
acyl-CoA metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acsm2b acyl-CoA synthetase medium chain family member 2B JBrowse link NW_004936501 5,925,845 5,943,462 RGD:9068941
adenosine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC101968893 cytosolic 5'-nucleotidase 1B JBrowse link NW_004936493 12,520,480 12,547,394 RGD:9068941
ADP metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ampd3 adenosine monophosphate deaminase 3 JBrowse link NW_004936528 7,847,156 7,891,585 RGD:9068941
AMP catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ampd3 adenosine monophosphate deaminase 3 JBrowse link NW_004936528 7,847,156 7,891,585 RGD:9068941
AMP metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ampd3 adenosine monophosphate deaminase 3 JBrowse link NW_004936528 7,847,156 7,891,585 RGD:9068941
arachidonic acid metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Faah2 fatty acid amide hydrolase 2 JBrowse link NW_004936980 183,629 319,072 RGD:9068941
G Pla2g4c phospholipase A2 group IVC JBrowse link NW_004936664 2,201,583 2,237,796 RGD:9068941
blood coagulation, intrinsic pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gp5 glycoprotein V platelet JBrowse link NW_004936711 403,876 405,570 RGD:9068941
C-terminal protein deglutamylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Folh1b folate hydrolase 1B JBrowse link NW_004936736 32,617 79,968 RGD:9068941
carbohydrate metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chit1 chitinase 1 JBrowse link NW_004936567 1,373,727 1,385,694 RGD:9068941
cellular amino acid biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Folh1b folate hydrolase 1B JBrowse link NW_004936736 32,617 79,968 RGD:9068941
cellular amino acid metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC101960098 aminoacylase-1 JBrowse link NW_004936529 3,308,863 3,333,877 RGD:9068941
G Srr serine racemase JBrowse link NW_004936538 8,362,033 8,383,820 RGD:9068941
cellular lipid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mt3 metallothionein 3 JBrowse link NW_004936475 8,864,512 8,866,516 RGD:9068941
cellular protein metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apcs amyloid P component, serum JBrowse link NW_004936740 979,007 987,312 RGD:9068941
G C4a complement C4A (Rodgers blood group) JBrowse link NW_004936727 1,556,204 1,570,084 RGD:9068941
G LOC101966143 histone H4 JBrowse link NW_004936580 173,731 175,254 RGD:9068941
G LOC101967236 histone H4 JBrowse link NW_004936671 2,803,784 2,804,173 RGD:9068941
G LOC101972420 histone H4 JBrowse link NW_004936671 2,019,007 2,019,428 RGD:9068941
G LOC101972801 histone H4 JBrowse link NW_004936671 1,953,045 1,953,612 RGD:9068941
G LOC101974797 histone H4 JBrowse link NW_004936671 1,881,645 1,882,070 RGD:9068941
G Serpina10 serpin family A member 10 JBrowse link NW_004936733 2,121,875 2,129,988 RGD:9068941
cholesterol biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Idi2 isopentenyl-diphosphate delta isomerase 2 JBrowse link NW_004936484 13,086,928 13,092,291 RGD:9068941
cholesterol catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mt3 metallothionein 3 JBrowse link NW_004936475 8,864,512 8,866,516 RGD:9068941
cholesterol metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cetp cholesteryl ester transfer protein JBrowse link NW_004936475 9,115,126 9,133,071 RGD:9068941
chondroitin sulfate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chpf2 chondroitin polymerizing factor 2 JBrowse link NW_004936527 6,637,563 6,643,051 RGD:9068941
chromatin silencing at rDNA term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC101966143 histone H4 JBrowse link NW_004936580 173,731 175,254 RGD:9068941
G LOC101967236 histone H4 JBrowse link NW_004936671 2,803,784 2,804,173 RGD:9068941
G LOC101972420 histone H4 JBrowse link NW_004936671 2,019,007 2,019,428 RGD:9068941
G LOC101972801 histone H4 JBrowse link NW_004936671 1,953,045 1,953,612 RGD:9068941
G LOC101974797 histone H4 JBrowse link NW_004936671 1,881,645 1,882,070 RGD:9068941
chromatin-mediated maintenance of transcription term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Zmiz2 zinc finger MIZ-type containing 2 JBrowse link NW_004936478 19,616,850 19,637,958 RGD:9068941
cytoplasmic translation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rpl32 ribosomal protein L32 JBrowse link NW_004936602 982,633 986,458 RGD:9068941
G Rpl36a ribosomal protein L36a JBrowse link NW_004936813 467,505 470,673 RGD:9068941
D-serine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Srr serine racemase JBrowse link NW_004936538 8,362,033 8,383,820 RGD:9068941
D-serine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Srr serine racemase JBrowse link NW_004936538 8,362,033 8,383,820 RGD:9068941
diacylglycerol biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ang angiogenin JBrowse link NW_004936880 39,372 40,070 RGD:9068941
dimethylallyl diphosphate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Idi2 isopentenyl-diphosphate delta isomerase 2 JBrowse link NW_004936484 13,086,928 13,092,291 RGD:9068941
DNA catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnase1l2 deoxyribonuclease 1 like 2 JBrowse link NW_004936694 1,808,184 1,810,735 RGD:9068941
DNA catabolic process, endonucleolytic term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnase1l2 deoxyribonuclease 1 like 2 JBrowse link NW_004936694 1,808,184 1,810,735 RGD:9068941
DNA metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dnase1l2 deoxyribonuclease 1 like 2 JBrowse link NW_004936694 1,808,184 1,810,735 RGD:9068941
DNA recombination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nsmce3 NSE3 homolog, SMC5-SMC6 complex component JBrowse link NW_004936483 1,433,119 1,434,506 RGD:9068941
DNA repair term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cenpx centromere protein X JBrowse link NW_004936594 5,517,665 5,520,606 RGD:9068941
G Nsmce3 NSE3 homolog, SMC5-SMC6 complex component JBrowse link NW_004936483 1,433,119 1,434,506 RGD:9068941
G Pole2 DNA polymerase epsilon 2, accessory subunit JBrowse link NW_004936583 340,428 386,633 RGD:9068941
DNA replication initiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pole2 DNA polymerase epsilon 2, accessory subunit JBrowse link NW_004936583 340,428 386,633 RGD:9068941
DNA-templated transcription, initiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC101966143 histone H4 JBrowse link NW_004936580 173,731 175,254 RGD:9068941
G LOC101967236 histone H4 JBrowse link NW_004936671 2,803,784 2,804,173 RGD:9068941
G LOC101972420 histone H4 JBrowse link NW_004936671 2,019,007 2,019,428 RGD:9068941
G LOC101972801 histone H4 JBrowse link NW_004936671 1,953,045 1,953,612 RGD:9068941
G LOC101974797 histone H4 JBrowse link NW_004936671 1,881,645 1,882,070 RGD:9068941
double-strand break repair via homologous recombination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hus1b HUS1 checkpoint clamp component B JBrowse link NW_004936633 1,820,063 1,821,150 RGD:9068941
double-strand break repair via nonhomologous end joining term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC101966143 histone H4 JBrowse link NW_004936580 173,731 175,254 RGD:9068941
G LOC101967236 histone H4 JBrowse link NW_004936671 2,803,784 2,804,173 RGD:9068941
G LOC101972420 histone H4 JBrowse link NW_004936671 2,019,007 2,019,428 RGD:9068941
G LOC101972801 histone H4 JBrowse link NW_004936671 1,953,045 1,953,612 RGD:9068941
G LOC101974797 histone H4 JBrowse link NW_004936671 1,881,645 1,882,070 RGD:9068941
ERK1 and ERK2 cascade term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ccl11 C-C motif chemokine ligand 11 JBrowse link NW_004936538 835,436 848,907 RGD:9068941
G Mt3 metallothionein 3 JBrowse link NW_004936475 8,864,512 8,866,516 RGD:9068941
error-prone translesion synthesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pole2 DNA polymerase epsilon 2, accessory subunit JBrowse link NW_004936583 340,428 386,633 RGD:9068941
fatty acid biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acsm2b acyl-CoA synthetase medium chain family member 2B JBrowse link NW_004936501 5,925,845 5,943,462 RGD:9068941
fatty acid metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ucp3 uncoupling protein 3 JBrowse link NW_004936498 3,082,575 3,095,739 RGD:9068941
fatty acid omega-oxidation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide JBrowse link NW_004936520 3,467,003 3,489,754 RGD:9068941
glucose metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Brat1 BRCA1 associated ATM activator 1 JBrowse link NW_004936823 393,878 404,348 RGD:9068941
G Pdha2 pyruvate dehydrogenase E1 alpha 2 subunit JBrowse link NW_004936717 2,377,982 2,379,137 RGD:9068941
glutamine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Glyatl1 glycine-N-acyltransferase like 1 JBrowse link NW_004936581 3,514,336 3,522,632 RGD:9068941
glycerol biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pgp phosphoglycolate phosphatase JBrowse link NW_004936694 1,834,016 1,836,359 RGD:9068941
glycerophospholipid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pla2g4c phospholipase A2 group IVC JBrowse link NW_004936664 2,201,583 2,237,796 RGD:9068941
glycerophospholipid metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pgp phosphoglycolate phosphatase JBrowse link NW_004936694 1,834,016 1,836,359 RGD:9068941
glycoprotein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fbxo44 F-box protein 44 JBrowse link NW_004936474 526,191 531,825 RGD:9068941
GTP metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ampd3 adenosine monophosphate deaminase 3 JBrowse link NW_004936528 7,847,156 7,891,585 RGD:9068941
heparan sulfate proteoglycan biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Vangl2 VANGL planar cell polarity protein 2 JBrowse link NW_004936740 228,377 242,318 RGD:9068941
histone acetylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Naa50 N(alpha)-acetyltransferase 50, NatE catalytic subunit JBrowse link NW_004936536 1,221,080 1,257,196 RGD:9068941
G Ncoa3 nuclear receptor coactivator 3 JBrowse link NW_004936514 5,900,135 5,967,862 RGD:9068941
histone deacetylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mta3 metastasis associated 1 family member 3 JBrowse link NW_004936508 8,989,695 9,132,694 RGD:9068941
histone H4 acetylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Naa50 N(alpha)-acetyltransferase 50, NatE catalytic subunit JBrowse link NW_004936536 1,221,080 1,257,196 RGD:9068941
histone H4-K16 acetylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Kansl1 KAT8 regulatory NSL complex subunit 1 JBrowse link NW_004936541 2,480,097 2,677,693 RGD:9068941
histone H4-K5 acetylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Kansl1 KAT8 regulatory NSL complex subunit 1 JBrowse link NW_004936541 2,480,097 2,677,693 RGD:9068941
histone H4-K8 acetylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Kansl1 KAT8 regulatory NSL complex subunit 1 JBrowse link NW_004936541 2,480,097 2,677,693 RGD:9068941
histone modification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mt3 metallothionein 3 JBrowse link NW_004936475 8,864,512 8,866,516 RGD:9068941
IMP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ampd3 adenosine monophosphate deaminase 3 JBrowse link NW_004936528 7,847,156 7,891,585 RGD:9068941
IMP salvage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ampd3 adenosine monophosphate deaminase 3 JBrowse link NW_004936528 7,847,156 7,891,585 RGD:9068941
inactivation of MAPK activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dusp4 dual specificity phosphatase 4 JBrowse link NW_004936573 765,954 778,524 RGD:9068941
inhibition of cysteine-type endopeptidase activity involved in apoptotic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nol3 nucleolar protein 3 JBrowse link NW_004936475 17,644,299 17,648,213 RGD:9068941
interstrand cross-link repair term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cenpx centromere protein X JBrowse link NW_004936594 5,517,665 5,520,606 RGD:9068941
isopentenyl diphosphate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Idi2 isopentenyl-diphosphate delta isomerase 2 JBrowse link NW_004936484 13,086,928 13,092,291 RGD:9068941
isopentenyl diphosphate metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Idi2 isopentenyl-diphosphate delta isomerase 2 JBrowse link NW_004936484 13,086,928 13,092,291 RGD:9068941
isoprenoid biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Idi2 isopentenyl-diphosphate delta isomerase 2 JBrowse link NW_004936484 13,086,928 13,092,291 RGD:9068941
L-serine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Srr serine racemase JBrowse link NW_004936538 8,362,033 8,383,820 RGD:9068941
L-serine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Srr serine racemase JBrowse link NW_004936538 8,362,033 8,383,820 RGD:9068941
lipid biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Olah oleoyl-ACP hydrolase JBrowse link NW_004936613 1,541,001 1,570,882 RGD:9068941
lipid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ces3 carboxylesterase 3 JBrowse link NW_004936475 17,485,803 17,498,649 RGD:9068941
G Ces4a carboxylesterase 4A JBrowse link NW_004936475 17,506,499 17,521,225 RGD:9068941
G Pafah1b2 platelet activating factor acetylhydrolase 1b catalytic subunit 2 JBrowse link NW_004936542 2,390,904 2,417,596 RGD:9068941
G Pla2g2a phospholipase A2 group IIA JBrowse link NW_004936474 6,091,978 6,095,961 RGD:9068941
lipid metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pafah1b2 platelet activating factor acetylhydrolase 1b catalytic subunit 2 JBrowse link NW_004936542 2,390,904 2,417,596 RGD:9068941
G Ucp3 uncoupling protein 3 JBrowse link NW_004936498 3,082,575 3,095,739 RGD:9068941
G Wnt10b Wnt family member 10B JBrowse link NW_004936512 6,768,240 6,774,172 RGD:9068941
lipoxygenase pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gpx4 glutathione peroxidase 4 JBrowse link NW_004936588 506,101 508,469 RGD:9068941
long-chain fatty acid biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gpx4 glutathione peroxidase 4 JBrowse link NW_004936588 506,101 508,469 RGD:9068941
MAPK cascade term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Artn artemin JBrowse link NW_004936474 25,252,510 25,254,221 RGD:9068941
G Sbk2 SH3 domain binding kinase family member 2 JBrowse link NW_004936886 739,863 745,971 RGD:9068941
medium-chain fatty acid biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Olah oleoyl-ACP hydrolase JBrowse link NW_004936613 1,541,001 1,570,882 RGD:9068941
miRNA metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dgcr8 DGCR8 microprocessor complex subunit JBrowse link NW_004936619 3,977,307 4,014,490 RGD:9068941
G Drosha drosha ribonuclease III JBrowse link NW_004936518 9,100,094 9,218,405 RGD:9068941
mRNA 3'-end processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cstf2t cleavage stimulation factor subunit 2 tau variant JBrowse link NW_004936787 838,153 842,118 RGD:9068941
mRNA catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hspa1a heat shock protein family A (Hsp70) member 1A JBrowse link NW_004936727 1,732,323 1,735,128 RGD:9068941
mRNA polyadenylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Papolb poly(A) polymerase beta JBrowse link NW_004936765 1,061,846 1,066,002 RGD:9068941
mRNA processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC101967165 histone H2A-Bbd type 2/3 JBrowse link NW_004936927 232,353 232,857 RGD:9068941
mRNA splice site selection term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nol3 nucleolar protein 3 JBrowse link NW_004936475 17,644,299 17,648,213 RGD:9068941
mRNA splicing, via spliceosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cstf2t cleavage stimulation factor subunit 2 tau variant JBrowse link NW_004936787 838,153 842,118 RGD:9068941
G Rbmxl2 RBMX like 2 JBrowse link NW_004936841 384,923 386,106 RGD:9068941
G Snrnp35 small nuclear ribonucleoprotein U11/U12 subunit 35 JBrowse link NW_004936558 1,297,517 1,302,410 RGD:9068941
mRNA transcription by RNA polymerase II term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arnt aryl hydrocarbon receptor nuclear translocator JBrowse link NW_004936580 1,038,420 1,093,319 RGD:9068941
G Lmo2 LIM domain only 2 JBrowse link NW_004936533 4,107,073 4,117,121 RGD:9068941
N-terminal protein amino acid acetylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Naa50 N(alpha)-acetyltransferase 50, NatE catalytic subunit JBrowse link NW_004936536 1,221,080 1,257,196 RGD:9068941
NAD biosynthesis via nicotinamide riboside salvage pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Parp10 poly(ADP-ribose) polymerase family member 10 JBrowse link NW_004936470 8,179,416 8,194,041 RGD:9068941
NAD biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Afmid arylformamidase JBrowse link NW_004936594 2,794,927 2,805,689 RGD:9068941
G Nmrk2 nicotinamide riboside kinase 2 JBrowse link NW_004936588 2,229,869 2,234,573 RGD:9068941
NADP biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nadk2 NAD kinase 2, mitochondrial JBrowse link NW_004936518 5,585,911 5,632,961 RGD:9068941
negative regulation by host of viral glycoprotein metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apcs amyloid P component, serum JBrowse link NW_004936740 979,007 987,312 RGD:9068941
negative regulation of amyloid precursor protein biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Itm2a integral membrane protein 2A JBrowse link NW_004936547 1,260,705 1,267,443 RGD:9068941
negative regulation of cellular protein metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mif macrophage migration inhibitory factor JBrowse link NW_004936619 1,207,058 1,208,010 RGD:9068941
negative regulation of cyclin-dependent protein kinase activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Camk2n1 calcium/calmodulin dependent protein kinase II inhibitor 1 JBrowse link NW_004936474 6,463,691 6,466,641 RGD:9068941
negative regulation of cysteine-type endopeptidase activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mt3 metallothionein 3 JBrowse link NW_004936475 8,864,512 8,866,516 RGD:9068941
negative regulation of cysteine-type endopeptidase activity involved in apoptotic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mt3 metallothionein 3 JBrowse link NW_004936475 8,864,512 8,866,516 RGD:9068941
G Naip NLR family apoptosis inhibitory protein JBrowse link NW_004936549 5,000,526 5,069,110 RGD:9068941
negative regulation of cytokine biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Asb1 ankyrin repeat and SOCS box containing 1 JBrowse link NW_004936525 79,568 94,147 RGD:9068941
negative regulation of DNA-binding transcription factor activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ctnnbip1 catenin beta interacting protein 1 JBrowse link NW_004936623 3,782,005 3,806,616 RGD:9068941
G Heyl hes related family bHLH transcription factor with YRPW motif like JBrowse link NW_004936474 21,503,763 21,513,392 RGD:9068941
G Twist1 twist family bHLH transcription factor 1 JBrowse link NW_004936546 5,331,220 5,332,669 RGD:9068941
negative regulation of double-strand break repair term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Twist1 twist family bHLH transcription factor 1 JBrowse link NW_004936546 5,331,220 5,332,669 RGD:9068941
negative regulation of endopeptidase activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G C4a complement C4A (Rodgers blood group) JBrowse link NW_004936727 1,556,204 1,570,084 RGD:9068941
G Cstb cystatin B JBrowse link NW_004936500 502,444 503,307 RGD:9068941
G Itih6 inter-alpha-trypsin inhibitor heavy chain family member 6 JBrowse link NW_004936751 1,601,650 1,630,115 RGD:9068941
G Serpina10 serpin family A member 10 JBrowse link NW_004936733 2,121,875 2,129,988 RGD:9068941
G Spink9 serine peptidase inhibitor Kazal type 9 JBrowse link NW_004936504 6,405,158 6,410,014 RGD:9068941
G Wfdc12 WAP four-disulfide core domain 12 JBrowse link NW_004936514 7,650,114 7,651,139 RGD:9068941
negative regulation of epidermal growth factor-activated receptor activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Vps25 vacuolar protein sorting 25 homolog JBrowse link NW_004936490 17,486,009 17,491,692 RGD:9068941
negative regulation of ERK1 and ERK2 cascade term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Camk2n1 calcium/calmodulin dependent protein kinase II inhibitor 1 JBrowse link NW_004936474 6,463,691 6,466,641 RGD:9068941
G Dusp4 dual specificity phosphatase 4 JBrowse link NW_004936573 765,954 778,524 RGD:9068941
negative regulation of gluconeogenesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pgp phosphoglycolate phosphatase JBrowse link NW_004936694 1,834,016 1,836,359 RGD:9068941
negative regulation of glycoprotein metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Apcs amyloid P component, serum JBrowse link NW_004936740 979,007 987,312 RGD:9068941
negative regulation of histone acetylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Twist1 twist family bHLH transcription factor 1 JBrowse link NW_004936546 5,331,220 5,332,669 RGD:9068941
negative regulation of histone H3-K27 methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ezhip EZH inhibitory protein JBrowse link NW_004936909 106,077 107,828 RGD:9068941
negative regulation of histone phosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Twist1 twist family bHLH transcription factor 1 JBrowse link NW_004936546 5,331,220 5,332,669 RGD:9068941
negative regulation of NF-kappaB transcription factor activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aim2 absent in melanoma 2 JBrowse link NW_004936740 1,447,869 1,460,836 RGD:9068941
G Parp10 poly(ADP-ribose) polymerase family member 10 JBrowse link NW_004936470 8,179,416 8,194,041 RGD:9068941
G Pydc1 pyrin domain containing 1 JBrowse link NW_004936501 13,561,927 13,564,392 RGD:9068941
G Trim40 tripartite motif containing 40 JBrowse link NW_004936723 897,213 909,263 RGD:9068941
negative regulation of peptidase activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cstb cystatin B JBrowse link NW_004936500 502,444 503,307 RGD:9068941
negative regulation of proteasomal protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G F8a1 coagulation factor VIII associated 1 JBrowse link NW_004936927 234,162 236,881 RGD:9068941
negative regulation of protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Trim40 tripartite motif containing 40 JBrowse link NW_004936723 897,213 909,263 RGD:9068941
negative regulation of protein K63-linked ubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Parp10 poly(ADP-ribose) polymerase family member 10 JBrowse link NW_004936470 8,179,416 8,194,041 RGD:9068941
negative regulation of protein kinase activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Camk2n1 calcium/calmodulin dependent protein kinase II inhibitor 1 JBrowse link NW_004936474 6,463,691 6,466,641 RGD:9068941
G Pydc1 pyrin domain containing 1 JBrowse link NW_004936501 13,561,927 13,564,392 RGD:9068941
G Smcr8 SMCR8-C9orf72 complex subunit JBrowse link NW_004936741 1,838,974 1,848,742 RGD:9068941
negative regulation of protein phosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pax6 paired box 6 JBrowse link NW_004936533 5,952,529 5,980,889 RGD:9068941
G Zbed3 zinc finger BED-type containing 3 JBrowse link NW_004936549 5,124,079 5,136,873 RGD:9068941
negative regulation of protein processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chac1 ChaC glutathione specific gamma-glutamylcyclotransferase 1 JBrowse link NW_004936471 4,344,234 4,346,998 RGD:9068941
negative regulation of protein serine/threonine kinase activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Inka2 inka box actin regulator 2 JBrowse link NW_004936690 370,051 386,094 RGD:9068941
negative regulation of protein ubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hspa1a heat shock protein family A (Hsp70) member 1A JBrowse link NW_004936727 1,732,323 1,735,128 RGD:9068941
negative regulation of proteolysis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Camk2n1 calcium/calmodulin dependent protein kinase II inhibitor 1 JBrowse link NW_004936474 6,463,691 6,466,641 RGD:9068941
G Cstb cystatin B JBrowse link NW_004936500 502,444 503,307 RGD:9068941
negative regulation of RNA biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fcn3 ficolin 3 JBrowse link NW_004936474 11,680,166 11,685,214 RGD:9068941
negative regulation of transcription by RNA polymerase II term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Emx1 empty spiracles homeobox 1 JBrowse link NW_004936491 16,745,310 16,762,422 RGD:9068941
G Fezf1 FEZ family zinc finger 1 JBrowse link NW_004936605 3,027,138 3,030,442 RGD:9068941
G Foxq1 forkhead box Q1 JBrowse link NW_004936633 2,458,473 2,460,990 RGD:9068941
G Hes1 hes family bHLH transcription factor 1 JBrowse link NW_004936711 640,002 642,580 RGD:9068941
G Heyl hes related family bHLH transcription factor with YRPW motif like JBrowse link NW_004936474 21,503,763 21,513,392 RGD:9068941
G Irf7 interferon regulatory factor 7 JBrowse link NW_004936888 445,340 448,801 RGD:9068941
G LOC101958065 uncharacterized LOC101958065 JBrowse link NW_004936739 1,778,016 1,836,177 RGD:9068941
G Mta3 metastasis associated 1 family member 3 JBrowse link NW_004936508 8,989,695 9,132,694 RGD:9068941
G Nkx2-1 NK2 homeobox 1 JBrowse link NW_004936494 10,517,488 10,520,567 RGD:9068941
G Noto notochord homeobox JBrowse link NW_004936491 16,987,797 16,996,423 RGD:9068941
G Pax6 paired box 6 JBrowse link NW_004936533 5,952,529 5,980,889 RGD:9068941
G Runx3 RUNX family transcription factor 3 JBrowse link NW_004936474 9,751,946 9,802,910 RGD:9068941
G Scrt1 scratch family transcriptional repressor 1 JBrowse link NW_004936470 7,907,294 7,913,136 RGD:9068941
G Scrt2 scratch family transcriptional repressor 2 JBrowse link NW_004936485 17,812,995 17,866,492 RGD:9068941
G Sox11 SRY-box transcription factor 11 JBrowse link NW_004937107 203,120 207,185 RGD:9068941
G Tbx22 T-box transcription factor 22 JBrowse link NW_004936547 1,645,118 1,654,332 RGD:9068941
G Tle5 TLE family member 5, transcriptional modulator JBrowse link NW_004936588 1,746,300 1,753,727 RGD:9068941
G Twist1 twist family bHLH transcription factor 1 JBrowse link NW_004936546 5,331,220 5,332,669 RGD:9068941
G Wnt10b Wnt family member 10B JBrowse link NW_004936512 6,768,240 6,774,172 RGD:9068941
G Znf501 zinc finger protein 501 JBrowse link NW_004936695 936,421 944,574 RGD:9068941
negative regulation of transcription from RNA polymerase II promoter in response to stress term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hspa1a heat shock protein family A (Hsp70) member 1A JBrowse link NW_004936727 1,732,323 1,735,128 RGD:9068941
negative regulation of transcription initiation from RNA polymerase II promoter term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ctnnbip1 catenin beta interacting protein 1 JBrowse link NW_004936623 3,782,005 3,806,616 RGD:9068941
negative regulation of transcription, DNA-templated term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bend5 BEN domain containing 5 JBrowse link NW_004936474 29,600,130 29,647,142 RGD:9068941
G Eid2b EP300 interacting inhibitor of differentiation 2B JBrowse link NW_004936661 2,352,726 2,354,968 RGD:9068941
G Hes1 hes family bHLH transcription factor 1 JBrowse link NW_004936711 640,002 642,580 RGD:9068941
G Heyl hes related family bHLH transcription factor with YRPW motif like JBrowse link NW_004936474 21,503,763 21,513,392 RGD:9068941
G Mt3 metallothionein 3 JBrowse link NW_004936475 8,864,512 8,866,516 RGD:9068941
G Mta3 metastasis associated 1 family member 3 JBrowse link NW_004936508 8,989,695 9,132,694 RGD:9068941
G Nkx2-1 NK2 homeobox 1 JBrowse link NW_004936494 10,517,488 10,520,567 RGD:9068941
G Tbx22 T-box transcription factor 22 JBrowse link NW_004936547 1,645,118 1,654,332 RGD:9068941
G Tle5 TLE family member 5, transcriptional modulator JBrowse link NW_004936588 1,746,300 1,753,727 RGD:9068941
G Twist1 twist family bHLH transcription factor 1 JBrowse link NW_004936546 5,331,220 5,332,669 RGD:9068941
G Znf540 zinc finger protein 540 JBrowse link NW_004936801 481,223 528,848 RGD:9068941
negative regulation of translation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ang angiogenin JBrowse link NW_004936880 39,372 40,070 RGD:9068941
G Nanos3 nanos C2HC-type zinc finger 3 JBrowse link NW_004936659 2,590,291 2,593,482 RGD:9068941
G Znf540 zinc finger protein 540 JBrowse link NW_004936801 481,223 528,848 RGD:9068941
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rpl32 ribosomal protein L32 JBrowse link NW_004936602 982,633 986,458 RGD:9068941
G Rpl36a ribosomal protein L36a JBrowse link NW_004936813 467,505 470,673 RGD:9068941
nucleobase-containing compound metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Slc28a2 solute carrier family 28 member 2 JBrowse link NW_004936471 7,937,490 7,967,568 RGD:9068941
nucleoside metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prps1l1 phosphoribosyl pyrophosphate synthetase 1 like 1 JBrowse link NW_004936546 4,332,773 4,333,738 RGD:9068941
G Upp2 uridine phosphorylase 2 JBrowse link NW_004936469 20,465,767 20,513,084 RGD:9068941
nucleotide biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prps1l1 phosphoribosyl pyrophosphate synthetase 1 like 1 JBrowse link NW_004936546 4,332,773 4,333,738 RGD:9068941
nucleotide catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Upp2 uridine phosphorylase 2 JBrowse link NW_004936469 20,465,767 20,513,084 RGD:9068941
nucleotide metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC101968893 cytosolic 5'-nucleotidase 1B JBrowse link NW_004936493 12,520,480 12,547,394 RGD:9068941
nucleotide-excision repair term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gtf2h2c GTF2H2 family member C JBrowse link NW_004936480 72,730 92,868 RGD:9068941
G Hus1b HUS1 checkpoint clamp component B JBrowse link NW_004936633 1,820,063 1,821,150 RGD:9068941
nucleotide-excision repair, DNA incision, 3'-to lesion term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Bivm basic, immunoglobulin-like variable motif containing JBrowse link NW_004936472 8,237,680 8,273,335 RGD:9068941
O-glycan processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Muc17 mucin 17, cell surface associated JBrowse link NW_004936543 976,794 987,062 RGD:9068941
G Muc3a mucin 3A, cell surface associated JBrowse link NW_004936543 886,333 904,504 RGD:9068941
peptidyl-lysine methylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Eef1akmt3 EEF1A lysine methyltransferase 3 JBrowse link NW_004936646 1,908,581 1,917,376 RGD:9068941
peptidyl-threonine dephosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dusp4 dual specificity phosphatase 4 JBrowse link NW_004936573 765,954 778,524 RGD:9068941
peptidyl-tyrosine dephosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dupd1 dual specificity phosphatase and pro isomerase domain containing 1 JBrowse link NW_004936521 4,267,619 4,305,481 RGD:9068941
G Dusp23 dual specificity phosphatase 23 JBrowse link NW_004943943 31 1,797 RGD:9068941
G Dusp4 dual specificity phosphatase 4 JBrowse link NW_004936573 765,954 778,524 RGD:9068941
G LOC101963005 magnesium-dependent phosphatase 1 JBrowse link NW_004936722 339,510 344,928 RGD:9068941
G Mtmr8 myotubularin related protein 8 JBrowse link NW_004936635 3,336,218 3,415,998 RGD:9068941
G Pgp phosphoglycolate phosphatase JBrowse link NW_004936694 1,834,016 1,836,359 RGD:9068941
peptidyl-tyrosine phosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Epha10 EPH receptor A10 JBrowse link NW_004936474 19,916,666 19,935,958 RGD:9068941
phosphatidic acid biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pla2g2a phospholipase A2 group IIA JBrowse link NW_004936474 6,091,978 6,095,961 RGD:9068941
phosphatidic acid metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pla2g2a phospholipase A2 group IIA JBrowse link NW_004936474 6,091,978 6,095,961 RGD:9068941
phosphatidylcholine acyl-chain remodeling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pla2g2a phospholipase A2 group IIA JBrowse link NW_004936474 6,091,978 6,095,961 RGD:9068941
G Pla2g4c phospholipase A2 group IVC JBrowse link NW_004936664 2,201,583 2,237,796 RGD:9068941
phosphatidylcholine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cetp cholesteryl ester transfer protein JBrowse link NW_004936475 9,115,126 9,133,071 RGD:9068941
phosphatidylethanolamine acyl-chain remodeling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pla2g2a phospholipase A2 group IIA JBrowse link NW_004936474 6,091,978 6,095,961 RGD:9068941
G Pla2g4c phospholipase A2 group IVC JBrowse link NW_004936664 2,201,583 2,237,796 RGD:9068941
phosphatidylglycerol acyl-chain remodeling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pla2g2a phospholipase A2 group IIA JBrowse link NW_004936474 6,091,978 6,095,961 RGD:9068941
phosphatidylinositol acyl-chain remodeling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pla2g2a phospholipase A2 group IIA JBrowse link NW_004936474 6,091,978 6,095,961 RGD:9068941
G Pla2g4c phospholipase A2 group IVC JBrowse link NW_004936664 2,201,583 2,237,796 RGD:9068941
phosphatidylinositol biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mtmr8 myotubularin related protein 8 JBrowse link NW_004936635 3,336,218 3,415,998 RGD:9068941
phosphatidylinositol dephosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mtmr8 myotubularin related protein 8 JBrowse link NW_004936635 3,336,218 3,415,998 RGD:9068941
phosphatidylinositol phosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ipmk inositol polyphosphate multikinase JBrowse link NW_004936614 4,724,935 4,772,373 RGD:9068941
phosphatidylserine acyl-chain remodeling term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pla2g2a phospholipase A2 group IIA JBrowse link NW_004936474 6,091,978 6,095,961 RGD:9068941
phospholipid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pla2g4c phospholipase A2 group IVC JBrowse link NW_004936664 2,201,583 2,237,796 RGD:9068941
phospholipid metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gpx4 glutathione peroxidase 4 JBrowse link NW_004936588 506,101 508,469 RGD:9068941
G Nkx2-1 NK2 homeobox 1 JBrowse link NW_004936494 10,517,488 10,520,567 RGD:9068941
G Pla2g2a phospholipase A2 group IIA JBrowse link NW_004936474 6,091,978 6,095,961 RGD:9068941
G Pla2g4c phospholipase A2 group IVC JBrowse link NW_004936664 2,201,583 2,237,796 RGD:9068941
polysaccharide catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Chit1 chitinase 1 JBrowse link NW_004936567 1,373,727 1,385,694 RGD:9068941
positive regulation of activation of Janus kinase activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC101969021 somatotropin JBrowse link NW_004936541 4,524,397 4,528,234 RGD:9068941
positive regulation of BMP signaling pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hes1 hes family bHLH transcription factor 1 JBrowse link NW_004936711 640,002 642,580 RGD:9068941
G Sox11 SRY-box transcription factor 11 JBrowse link NW_004937107 203,120 207,185 RGD:9068941
positive regulation of cysteine-type endopeptidase activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aim2 absent in melanoma 2 JBrowse link NW_004936740 1,447,869 1,460,836 RGD:9068941
positive regulation of DNA-binding transcription factor activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Trim15 tripartite motif containing 15 JBrowse link NW_004936723 869,019 880,200 RGD:9068941
G Trim31 tripartite motif containing 31 JBrowse link NW_004936723 934,808 945,279 RGD:9068941
G Wnt10b Wnt family member 10B JBrowse link NW_004936512 6,768,240 6,774,172 RGD:9068941
positive regulation of DNA-templated transcription, initiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Twist1 twist family bHLH transcription factor 1 JBrowse link NW_004936546 5,331,220 5,332,669 RGD:9068941
positive regulation of endoribonuclease activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hspa1a heat shock protein family A (Hsp70) member 1A JBrowse link NW_004936727 1,732,323 1,735,128 RGD:9068941
positive regulation of ERK1 and ERK2 cascade term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Alkal2 ALK and LTK ligand 2 JBrowse link NW_004936532 146,648 154,475 RGD:9068941
G Ccl11 C-C motif chemokine ligand 11 JBrowse link NW_004936538 835,436 848,907 RGD:9068941
G Ccl15 C-C motif chemokine ligand 15 JBrowse link NW_004936490 298,270 302,147 RGD:9068941
G Mif macrophage migration inhibitory factor JBrowse link NW_004936619 1,207,058 1,208,010 RGD:9068941
G Mt3 metallothionein 3 JBrowse link NW_004936475 8,864,512 8,866,516 RGD:9068941
G Pla2g2a phospholipase A2 group IIA JBrowse link NW_004936474 6,091,978 6,095,961 RGD:9068941
G Sstr4 somatostatin receptor 4 JBrowse link NW_004936620 2,575,880 2,577,761 RGD:9068941
positive regulation of ERK5 cascade term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Alkal2 ALK and LTK ligand 2 JBrowse link NW_004936532 146,648 154,475 RGD:9068941
positive regulation of fatty acid beta-oxidation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Twist1 twist family bHLH transcription factor 1 JBrowse link NW_004936546 5,331,220 5,332,669 RGD:9068941
positive regulation of glycogen biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ppp1r3g protein phosphatase 1 regulatory subunit 3G JBrowse link NW_004936534 7,379,443 7,382,752 RGD:9068941
positive regulation of glycolytic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arnt aryl hydrocarbon receptor nuclear translocator JBrowse link NW_004936580 1,038,420 1,093,319 RGD:9068941
positive regulation of JNK cascade term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Eda2r ectodysplasin A2 receptor JBrowse link NW_004936635 1,303,855 1,335,766 RGD:9068941
positive regulation of JUN kinase activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Vangl2 VANGL planar cell polarity protein 2 JBrowse link NW_004936740 228,377 242,318 RGD:9068941
positive regulation of lipid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sct secretin JBrowse link NW_004936888 459,168 459,919 RGD:9068941
positive regulation of MAP kinase activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC101968601 signal transducer CD24 JBrowse link NW_004936491 16,706,745 16,707,010 RGD:9068941
G LOC101969021 somatotropin JBrowse link NW_004936541 4,524,397 4,528,234 RGD:9068941
G Mif macrophage migration inhibitory factor JBrowse link NW_004936619 1,207,058 1,208,010 RGD:9068941
positive regulation of NF-kappaB transcription factor activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Aim2 absent in melanoma 2 JBrowse link NW_004936740 1,447,869 1,460,836 RGD:9068941
G Eda2r ectodysplasin A2 receptor JBrowse link NW_004936635 1,303,855 1,335,766 RGD:9068941
G Hspa1a heat shock protein family A (Hsp70) member 1A JBrowse link NW_004936727 1,732,323 1,735,128 RGD:9068941
G Trim15 tripartite motif containing 15 JBrowse link NW_004936723 869,019 880,200 RGD:9068941
positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nanos3 nanos C2HC-type zinc finger 3 JBrowse link NW_004936659 2,590,291 2,593,482 RGD:9068941
positive regulation of nucleic acid-templated transcription term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dtx1 deltex E3 ubiquitin ligase 1 JBrowse link NW_004936668 3,006,539 3,021,066 RGD:9068941
G Gtf2a1l general transcription factor IIA subunit 1 like JBrowse link NW_004936508 3,989,492 4,049,975 RGD:9068941
G LOC101978306 polyamine-modulated factor 1 JBrowse link NW_004936580 5,454,574 5,479,600 RGD:9068941
G Mta3 metastasis associated 1 family member 3 JBrowse link NW_004936508 8,989,695 9,132,694 RGD:9068941
G Page4 PAGE family member 4 JBrowse link NW_004936721 1,347,679 1,350,598 RGD:9068941
positive regulation of peptidyl-serine phosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mif macrophage migration inhibitory factor JBrowse link NW_004936619 1,207,058 1,208,010 RGD:9068941
G Tcl1a T cell leukemia/lymphoma 1A JBrowse link NW_004936604 127,841 131,056 RGD:9068941
positive regulation of peptidyl-tyrosine phosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC101969021 somatotropin JBrowse link NW_004936541 4,524,397 4,528,234 RGD:9068941
G Mif macrophage migration inhibitory factor JBrowse link NW_004936619 1,207,058 1,208,010 RGD:9068941
positive regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hspa1a heat shock protein family A (Hsp70) member 1A JBrowse link NW_004936727 1,732,323 1,735,128 RGD:9068941
positive regulation of protein kinase activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mmd2 monocyte to macrophage differentiation associated 2 JBrowse link NW_004936765 1,013,959 1,034,736 RGD:9068941
positive regulation of protein phosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Brat1 BRCA1 associated ATM activator 1 JBrowse link NW_004936823 393,878 404,348 RGD:9068941
G LOC101969274 intelectin-1 JBrowse link NW_004936903 191,836 199,448 RGD:9068941
G Mt3 metallothionein 3 JBrowse link NW_004936475 8,864,512 8,866,516 RGD:9068941
positive regulation of protein serine/threonine kinase activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tcl1a T cell leukemia/lymphoma 1A JBrowse link NW_004936604 127,841 131,056 RGD:9068941
positive regulation of protein sumoylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arnt aryl hydrocarbon receptor nuclear translocator JBrowse link NW_004936580 1,038,420 1,093,319 RGD:9068941
positive regulation of protein tyrosine kinase activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Alkal2 ALK and LTK ligand 2 JBrowse link NW_004936532 146,648 154,475 RGD:9068941
G LOC101968601 signal transducer CD24 JBrowse link NW_004936491 16,706,745 16,707,010 RGD:9068941
positive regulation of protein ubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cenpx centromere protein X JBrowse link NW_004936594 5,517,665 5,520,606 RGD:9068941
G Nsmce3 NSE3 homolog, SMC5-SMC6 complex component JBrowse link NW_004936483 1,433,119 1,434,506 RGD:9068941
positive regulation of RNA polymerase II transcriptional preinitiation complex assembly term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Wnt10b Wnt family member 10B JBrowse link NW_004936512 6,768,240 6,774,172 RGD:9068941
positive regulation of RNA splicing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hspa1a heat shock protein family A (Hsp70) member 1A JBrowse link NW_004936727 1,732,323 1,735,128 RGD:9068941
positive regulation of telomerase activity term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Parm1 prostate androgen-regulated mucin-like protein 1 JBrowse link NW_004936598 761,261 864,459 RGD:9068941
positive regulation of transcription by RNA polymerase II term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arnt aryl hydrocarbon receptor nuclear translocator JBrowse link NW_004936580 1,038,420 1,093,319 RGD:9068941
G Cited4 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4 JBrowse link NW_004936474 22,514,800 22,516,166 RGD:9068941
G CUNH1orf61 chromosome unknown C1orf61 homolog JBrowse link NW_004936580 5,610,465 5,631,041 RGD:9068941
G Hes1 hes family bHLH transcription factor 1 JBrowse link NW_004936711 640,002 642,580 RGD:9068941
G Heyl hes related family bHLH transcription factor with YRPW motif like JBrowse link NW_004936474 21,503,763 21,513,392 RGD:9068941
G Hoxd4 homeobox D4 JBrowse link NW_004936509 5,637,600 5,640,335 RGD:9068941
G Irf7 interferon regulatory factor 7 JBrowse link NW_004936888 445,340 448,801 RGD:9068941
G Klf13 Kruppel like factor 13 JBrowse link NW_004936483 477,490 575,143 RGD:9068941
G Lmo2 LIM domain only 2 JBrowse link NW_004936533 4,107,073 4,117,121 RGD:9068941
G Ncoa3 nuclear receptor coactivator 3 JBrowse link NW_004936514 5,900,135 5,967,862 RGD:9068941
G Nkx2-1 NK2 homeobox 1 JBrowse link NW_004936494 10,517,488 10,520,567 RGD:9068941
G Nr5a1 nuclear receptor subfamily 5 group A member 1 JBrowse link NW_004936487 12,739,445 12,763,729 RGD:9068941
G Pax6 paired box 6 JBrowse link NW_004936533 5,952,529 5,980,889 RGD:9068941
G Sox11 SRY-box transcription factor 11 JBrowse link NW_004937107 203,120 207,185 RGD:9068941
G Tbx22 T-box transcription factor 22 JBrowse link NW_004936547 1,645,118 1,654,332 RGD:9068941
G Twist1 twist family bHLH transcription factor 1 JBrowse link NW_004936546 5,331,220 5,332,669 RGD:9068941
G Utf1 undifferentiated embryonic cell transcription factor 1 JBrowse link NW_004936486 19,345,059 19,346,163 RGD:9068941
G Zbed3 zinc finger BED-type containing 3 JBrowse link NW_004936549 5,124,079 5,136,873 RGD:9068941
G Zic1 Zic family member 1 JBrowse link NW_004936519 7,997,824 8,001,614 RGD:9068941
G Zmiz2 zinc finger MIZ-type containing 2 JBrowse link NW_004936478 19,616,850 19,637,958 RGD:9068941
G Znf501 zinc finger protein 501 JBrowse link NW_004936695 936,421 944,574 RGD:9068941
positive regulation of transcription from RNA polymerase II promoter in response to oxidative stress term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mt3 metallothionein 3 JBrowse link NW_004936475 8,864,512 8,866,516 RGD:9068941
positive regulation of transcription of Notch receptor target term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Heyl hes related family bHLH transcription factor with YRPW motif like JBrowse link NW_004936474 21,503,763 21,513,392 RGD:9068941
positive regulation of transcription, DNA-templated term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arnt aryl hydrocarbon receptor nuclear translocator JBrowse link NW_004936580 1,038,420 1,093,319 RGD:9068941
G Fezf1 FEZ family zinc finger 1 JBrowse link NW_004936605 3,027,138 3,030,442 RGD:9068941
G Hes1 hes family bHLH transcription factor 1 JBrowse link NW_004936711 640,002 642,580 RGD:9068941
G Hmgn5 high mobility group nucleosome binding domain 5 JBrowse link NW_004936547 2,607,491 2,614,037 RGD:9068941
G Irf7 interferon regulatory factor 7 JBrowse link NW_004936888 445,340 448,801 RGD:9068941
G Mt3 metallothionein 3 JBrowse link NW_004936475 8,864,512 8,866,516 RGD:9068941
G Ncoa3 nuclear receptor coactivator 3 JBrowse link NW_004936514 5,900,135 5,967,862 RGD:9068941
G Nkx2-1 NK2 homeobox 1 JBrowse link NW_004936494 10,517,488 10,520,567 RGD:9068941
G Pax6 paired box 6 JBrowse link NW_004936533 5,952,529 5,980,889 RGD:9068941
G Rnf187 ring finger protein 187 JBrowse link NW_004937135 64,950 70,083 RGD:9068941
G Runx3 RUNX family transcription factor 3 JBrowse link NW_004936474 9,751,946 9,802,910 RGD:9068941
G Sox11 SRY-box transcription factor 11 JBrowse link NW_004937107 203,120 207,185 RGD:9068941
G Zic1 Zic family member 1 JBrowse link NW_004936519 7,997,824 8,001,614 RGD:9068941
positive regulation of tyrosine phosphorylation of STAT protein term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hes1 hes family bHLH transcription factor 1 JBrowse link NW_004936711 640,002 642,580 RGD:9068941
G LOC101969021 somatotropin JBrowse link NW_004936541 4,524,397 4,528,234 RGD:9068941
post-translational protein modification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Asb1 ankyrin repeat and SOCS box containing 1 JBrowse link NW_004936525 79,568 94,147 RGD:9068941
G C4a complement C4A (Rodgers blood group) JBrowse link NW_004936727 1,556,204 1,570,084 RGD:9068941
G Fbxo44 F-box protein 44 JBrowse link NW_004936474 526,191 531,825 RGD:9068941
G Serpina10 serpin family A member 10 JBrowse link NW_004936733 2,121,875 2,129,988 RGD:9068941
pre-miRNA processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Drosha drosha ribonuclease III JBrowse link NW_004936518 9,100,094 9,218,405 RGD:9068941
pre-mRNA cleavage required for polyadenylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cstf2t cleavage stimulation factor subunit 2 tau variant JBrowse link NW_004936787 838,153 842,118 RGD:9068941
primary miRNA processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dgcr8 DGCR8 microprocessor complex subunit JBrowse link NW_004936619 3,977,307 4,014,490 RGD:9068941
G Drosha drosha ribonuclease III JBrowse link NW_004936518 9,100,094 9,218,405 RGD:9068941
production of miRNAs involved in gene silencing by miRNA term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Zc3h7b zinc finger CCCH-type containing 7B JBrowse link NW_004936492 532,883 584,142 RGD:9068941
production of siRNA involved in RNA interference term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Drosha drosha ribonuclease III JBrowse link NW_004936518 9,100,094 9,218,405 RGD:9068941
prostaglandin biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mif macrophage migration inhibitory factor JBrowse link NW_004936619 1,207,058 1,208,010 RGD:9068941
proteasomal protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fbxo44 F-box protein 44 JBrowse link NW_004936474 526,191 531,825 RGD:9068941
proteasome-mediated ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rnf187 ring finger protein 187 JBrowse link NW_004937135 64,950 70,083 RGD:9068941
G Trim2 tripartite motif containing 2 JBrowse link NW_004936576 88,163 202,944 RGD:9068941
protein ADP-ribosylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Parp10 poly(ADP-ribose) polymerase family member 10 JBrowse link NW_004936470 8,179,416 8,194,041 RGD:9068941
protein auto-ADP-ribosylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Parp10 poly(ADP-ribose) polymerase family member 10 JBrowse link NW_004936470 8,179,416 8,194,041 RGD:9068941
protein autophosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Camk2b calcium/calmodulin dependent protein kinase II beta JBrowse link NW_004936478 19,183,493 19,278,457 RGD:9068941
protein autoubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rnf187 ring finger protein 187 JBrowse link NW_004937135 64,950 70,083 RGD:9068941
protein dephosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dupd1 dual specificity phosphatase and pro isomerase domain containing 1 JBrowse link NW_004936521 4,267,619 4,305,481 RGD:9068941
protein deubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Usp29 ubiquitin specific peptidase 29 JBrowse link NW_004936882 752,014 753,981 RGD:9068941
protein K11-linked ubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ube2d4 ubiquitin conjugating enzyme E2 D4 (putative) JBrowse link NW_004936478 18,981,457 19,003,924 RGD:9068941
protein K27-linked ubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ube2d4 ubiquitin conjugating enzyme E2 D4 (putative) JBrowse link NW_004936478 18,981,457 19,003,924 RGD:9068941
protein K29-linked ubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ube2d4 ubiquitin conjugating enzyme E2 D4 (putative) JBrowse link NW_004936478 18,981,457 19,003,924 RGD:9068941
protein K48-linked ubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rnf187 ring finger protein 187 JBrowse link NW_004937135 64,950 70,083 RGD:9068941
G Ube2d4 ubiquitin conjugating enzyme E2 D4 (putative) JBrowse link NW_004936478 18,981,457 19,003,924 RGD:9068941
protein K6-linked ubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ube2d4 ubiquitin conjugating enzyme E2 D4 (putative) JBrowse link NW_004936478 18,981,457 19,003,924 RGD:9068941
protein K63-linked ubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ube2d4 ubiquitin conjugating enzyme E2 D4 (putative) JBrowse link NW_004936478 18,981,457 19,003,924 RGD:9068941
protein maturation by iron-sulfur cluster transfer term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Isca1 iron-sulfur cluster assembly 1 JBrowse link NW_004936680 1,673,666 1,689,646 RGD:9068941
protein mono-ADP-ribosylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Parp10 poly(ADP-ribose) polymerase family member 10 JBrowse link NW_004936470 8,179,416 8,194,041 RGD:9068941
protein neddylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Trim40 tripartite motif containing 40 JBrowse link NW_004936723 897,213 909,263 RGD:9068941
protein peptidyl-prolyl isomerization term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fkbp14 FKBP prolyl isomerase 14 JBrowse link NW_004936478 6,296,598 6,310,405 RGD:9068941
protein phosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Camk2b calcium/calmodulin dependent protein kinase II beta JBrowse link NW_004936478 19,183,493 19,278,457 RGD:9068941
G Ccl11 C-C motif chemokine ligand 11 JBrowse link NW_004936538 835,436 848,907 RGD:9068941
G Epha10 EPH receptor A10 JBrowse link NW_004936474 19,916,666 19,935,958 RGD:9068941
G Mlkl mixed lineage kinase domain like pseudokinase JBrowse link NW_004936475 23,591,483 23,618,152 RGD:9068941
G Mmd2 monocyte to macrophage differentiation associated 2 JBrowse link NW_004936765 1,013,959 1,034,736 RGD:9068941
G Runx3 RUNX family transcription factor 3 JBrowse link NW_004936474 9,751,946 9,802,910 RGD:9068941
protein poly-ADP-ribosylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Parp10 poly(ADP-ribose) polymerase family member 10 JBrowse link NW_004936470 8,179,416 8,194,041 RGD:9068941
protein polyubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fbxo44 F-box protein 44 JBrowse link NW_004936474 526,191 531,825 RGD:9068941
G Trim2 tripartite motif containing 2 JBrowse link NW_004936576 88,163 202,944 RGD:9068941
protein sumoylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Seh1l SEH1 like nucleoporin JBrowse link NW_004936626 2,538,655 2,562,468 RGD:9068941
G Sumo3 small ubiquitin like modifier 3 JBrowse link NW_004936778 1,392,110 1,412,153 RGD:9068941
G Zmiz2 zinc finger MIZ-type containing 2 JBrowse link NW_004936478 19,616,850 19,637,958 RGD:9068941
protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Vps25 vacuolar protein sorting 25 homolog JBrowse link NW_004936490 17,486,009 17,491,692 RGD:9068941
protein ubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Asb1 ankyrin repeat and SOCS box containing 1 JBrowse link NW_004936525 79,568 94,147 RGD:9068941
G Dtx1 deltex E3 ubiquitin ligase 1 JBrowse link NW_004936668 3,006,539 3,021,066 RGD:9068941
G Trim31 tripartite motif containing 31 JBrowse link NW_004936723 934,808 945,279 RGD:9068941
G Ube2d4 ubiquitin conjugating enzyme E2 D4 (putative) JBrowse link NW_004936478 18,981,457 19,003,924 RGD:9068941
proteolysis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Capns2 calpain small subunit 2 JBrowse link NW_004936475 7,872,423 7,874,086 RGD:9068941
G Folh1b folate hydrolase 1B JBrowse link NW_004936736 32,617 79,968 RGD:9068941
G LOC101960098 aminoacylase-1 JBrowse link NW_004936529 3,308,863 3,333,877 RGD:9068941
G Mmp10 matrix metallopeptidase 10 JBrowse link NW_004936551 5,188,395 5,197,477 RGD:9068941
G Prss46p serine protease 46, pseudogene JBrowse link NW_004936596 548,354 563,883 RGD:9068941
G Pydc1 pyrin domain containing 1 JBrowse link NW_004936501 13,561,927 13,564,392 RGD:9068941
purine nucleotide biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prps1l1 phosphoribosyl pyrophosphate synthetase 1 like 1 JBrowse link NW_004936546 4,332,773 4,333,738 RGD:9068941
purine nucleotide catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC101968893 cytosolic 5'-nucleotidase 1B JBrowse link NW_004936493 12,520,480 12,547,394 RGD:9068941
purine-containing compound salvage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ampd3 adenosine monophosphate deaminase 3 JBrowse link NW_004936528 7,847,156 7,891,585 RGD:9068941
pyrimidine nucleobase metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tymp thymidine phosphorylase JBrowse link NW_004936629 315,609 320,356 RGD:9068941
pyrimidine nucleoside catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tymp thymidine phosphorylase JBrowse link NW_004936629 315,609 320,356 RGD:9068941
G Upp2 uridine phosphorylase 2 JBrowse link NW_004936469 20,465,767 20,513,084 RGD:9068941
pyrimidine nucleoside metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tymp thymidine phosphorylase JBrowse link NW_004936629 315,609 320,356 RGD:9068941
pyrimidine nucleoside salvage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Tymp thymidine phosphorylase JBrowse link NW_004936629 315,609 320,356 RGD:9068941
G Upp2 uridine phosphorylase 2 JBrowse link NW_004936469 20,465,767 20,513,084 RGD:9068941
reciprocal meiotic recombination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cntd1 cyclin N-terminal domain containing 1 JBrowse link NW_004936490 17,509,619 17,517,396 RGD:9068941
G Tex19 testis expressed 19 JBrowse link NW_004936923 807 1,835 RGD:9068941
regulation of dopamine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Drd4 dopamine receptor D4 JBrowse link NW_004936888 468,334 471,254 RGD:9068941
regulation of glycolytic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Seh1l SEH1 like nucleoporin JBrowse link NW_004936626 2,538,655 2,562,468 RGD:9068941
regulation of lipid metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Opa3 outer mitochondrial membrane lipid metabolism regulator OPA3 JBrowse link NW_004936706 1,961,571 1,996,637 RGD:9068941
G Psapl1 prosaposin like 1 JBrowse link NW_004936477 19,100,427 19,102,968 RGD:9068941
regulation of MAPK cascade term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC101968601 signal transducer CD24 JBrowse link NW_004936491 16,706,745 16,707,010 RGD:9068941
regulation of miRNA metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Drosha drosha ribonuclease III JBrowse link NW_004936518 9,100,094 9,218,405 RGD:9068941
regulation of mRNA stability term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hspa1a heat shock protein family A (Hsp70) member 1A JBrowse link NW_004936727 1,732,323 1,735,128 RGD:9068941
regulation of proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Wnt10b Wnt family member 10B JBrowse link NW_004936512 6,768,240 6,774,172 RGD:9068941
regulation of protein glycosylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Mt3 metallothionein 3 JBrowse link NW_004936475 8,864,512 8,866,516 RGD:9068941
regulation of protein ubiquitination term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hspa1a heat shock protein family A (Hsp70) member 1A JBrowse link NW_004936727 1,732,323 1,735,128 RGD:9068941
regulation of RNA biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ncoa3 nuclear receptor coactivator 3 JBrowse link NW_004936514 5,900,135 5,967,862 RGD:9068941
regulation of steroid biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nr5a1 nuclear receptor subfamily 5 group A member 1 JBrowse link NW_004936487 12,739,445 12,763,729 RGD:9068941
regulation of stress-activated MAPK cascade term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Page4 PAGE family member 4 JBrowse link NW_004936721 1,347,679 1,350,598 RGD:9068941
regulation of transcription by RNA polymerase II term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Argfx arginine-fifty homeobox JBrowse link NW_004936536 8,025,883 8,040,423 RGD:9068941
G Bhlhe22 basic helix-loop-helix family member e22 JBrowse link NW_004936496 9,085,894 9,087,623 RGD:9068941
G Emx1 empty spiracles homeobox 1 JBrowse link NW_004936491 16,745,310 16,762,422 RGD:9068941
G Foxd4 forkhead box D4 JBrowse link NW_004936503 4,658,802 4,660,203 RGD:9068941
G Foxq1 forkhead box Q1 JBrowse link NW_004936633 2,458,473 2,460,990 RGD:9068941
G Gtf2h2c GTF2H2 family member C JBrowse link NW_004936480 72,730 92,868 RGD:9068941
G Hoxc9 homeobox C9 JBrowse link NW_004936512 11,222,120 11,225,455 RGD:9068941
G Isl2 ISL LIM homeobox 2 JBrowse link NW_004936471 35,840,202 35,845,822 RGD:9068941
G Klf13 Kruppel like factor 13 JBrowse link NW_004936483 477,490 575,143 RGD:9068941
G Leutx leucine twenty homeobox JBrowse link NW_004936661 2,399,154 2,406,044 RGD:9068941
G LOC101955631 ETS domain-containing transcription factor ERF JBrowse link NW_004936706 537,933 540,209 RGD:9068941
G Noto notochord homeobox JBrowse link NW_004936491 16,987,797 16,996,423 RGD:9068941
G Pou5f2 POU domain class 5, transcription factor 2 JBrowse link NW_004936523 9,360,876 9,363,054 RGD:9068941
G Sp8 Sp8 transcription factor JBrowse link NW_004936546 6,744,209 6,746,797 RGD:9068941
G Utf1 undifferentiated embryonic cell transcription factor 1 JBrowse link NW_004936486 19,345,059 19,346,163 RGD:9068941
G Zmiz2 zinc finger MIZ-type containing 2 JBrowse link NW_004936478 19,616,850 19,637,958 RGD:9068941
G Znf14 zinc finger protein 14 JBrowse link NW_004936596 1,822,534 1,826,715 RGD:9068941
G Znf26 zinc finger protein 26 JBrowse link NW_004936660 2,786,740 2,803,476 RGD:9068941
G Znf30 zinc finger protein 30 JBrowse link NW_004936570 1,284,771 1,297,816 RGD:9068941
regulation of transcription from RNA polymerase II promoter in response to hypoxia term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arnt aryl hydrocarbon receptor nuclear translocator JBrowse link NW_004936580 1,038,420 1,093,319 RGD:9068941
regulation of transcription from RNA polymerase II promoter in response to oxidative stress term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arnt aryl hydrocarbon receptor nuclear translocator JBrowse link NW_004936580 1,038,420 1,093,319 RGD:9068941
regulation of transcription from RNA polymerase II promoter involved in somatic motor neuron fate commitment term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pax6 paired box 6 JBrowse link NW_004936533 5,952,529 5,980,889 RGD:9068941
regulation of transcription from RNA polymerase II promoter involved in spinal cord motor neuron fate specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pax6 paired box 6 JBrowse link NW_004936533 5,952,529 5,980,889 RGD:9068941
regulation of transcription from RNA polymerase II promoter involved in ventral spinal cord interneuron specification term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pax6 paired box 6 JBrowse link NW_004936533 5,952,529 5,980,889 RGD:9068941
regulation of transcription, DNA-templated term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ankrd30a ankyrin repeat domain 30A JBrowse link NW_004936617 2,273,033 2,383,120 RGD:9068941
G Arnt aryl hydrocarbon receptor nuclear translocator JBrowse link NW_004936580 1,038,420 1,093,319 RGD:9068941
G Hmgn5 high mobility group nucleosome binding domain 5 JBrowse link NW_004936547 2,607,491 2,614,037 RGD:9068941
G Irf7 interferon regulatory factor 7 JBrowse link NW_004936888 445,340 448,801 RGD:9068941
G Leutx leucine twenty homeobox JBrowse link NW_004936661 2,399,154 2,406,044 RGD:9068941
G LOC101958065 uncharacterized LOC101958065 JBrowse link NW_004936739 1,778,016 1,836,177 RGD:9068941
G LOC101960144 zinc finger protein 852 JBrowse link NW_004936695 1,052,208 1,053,597 RGD:9068941
G LOC101967816 uncharacterized LOC101967816 JBrowse link NW_004936475 24,361,612 24,367,012 RGD:9068941
G LOC106145336 zinc finger protein 879 JBrowse link NW_004936739 1,665,595 1,704,963 RGD:9068941
G Mta3 metastasis associated 1 family member 3 JBrowse link NW_004936508 8,989,695 9,132,694 RGD:9068941
G Npff neuropeptide FF-amide peptide precursor JBrowse link NW_004936512 10,780,277 10,782,219 RGD:9068941
G Nr5a1 nuclear receptor subfamily 5 group A member 1 JBrowse link NW_004936487 12,739,445 12,763,729 RGD:9068941
G Nsmce3 NSE3 homolog, SMC5-SMC6 complex component JBrowse link NW_004936483 1,433,119 1,434,506 RGD:9068941
G Pax6 paired box 6 JBrowse link NW_004936533 5,952,529 5,980,889 RGD:9068941
G Ralgapa1 Ral GTPase activating protein catalytic alpha subunit 1 JBrowse link NW_004936494 9,649,444 9,866,942 RGD:9068941
G Runx3 RUNX family transcription factor 3 JBrowse link NW_004936474 9,751,946 9,802,910 RGD:9068941
G Scrt1 scratch family transcriptional repressor 1 JBrowse link NW_004936470 7,907,294 7,913,136 RGD:9068941
G Scrt2 scratch family transcriptional repressor 2 JBrowse link NW_004936485 17,812,995 17,866,492 RGD:9068941
G Sox11 SRY-box transcription factor 11 JBrowse link NW_004937107 203,120 207,185 RGD:9068941
G Tbx22 T-box transcription factor 22 JBrowse link NW_004936547 1,645,118 1,654,332 RGD:9068941
G Tle5 TLE family member 5, transcriptional modulator JBrowse link NW_004936588 1,746,300 1,753,727 RGD:9068941
G Zfp28 ZFP28 zinc finger protein JBrowse link NW_004936882 275,907 298,874 RGD:9068941
G Zfp69b ZFP69 zinc finger protein B JBrowse link NW_004936474 22,198,176 22,210,448 RGD:9068941
G Zkscan1 zinc finger with KRAB and SCAN domains 1 JBrowse link NW_004936543 150,845 192,197 RGD:9068941
G Znf232 zinc finger protein 232 JBrowse link NW_004936677 2,640,545 2,645,540 RGD:9068941
G Znf251 zinc finger protein 251 JBrowse link NW_004936470 7,591,956 7,620,288 RGD:9068941
G Znf26 zinc finger protein 26 JBrowse link NW_004936660 2,786,740 2,803,476 RGD:9068941
G Znf280a zinc finger protein 280A JBrowse link NW_004936874 624,846 626,357 RGD:9068941
G Znf30 zinc finger protein 30 JBrowse link NW_004936570 1,284,771 1,297,816 RGD:9068941
G Znf540 zinc finger protein 540 JBrowse link NW_004936801 481,223 528,848 RGD:9068941
G Znf546 zinc finger protein 546 JBrowse link NW_004936661 2,545,011 2,564,695 RGD:9068941
G Znf57 zinc finger protein 57 JBrowse link NW_004936588 1,669,099 1,676,649 RGD:9068941
G Znf615 zinc finger protein 615 JBrowse link NW_004937026 261,317 265,286 RGD:9068941
G Znf619 zinc finger protein 619 JBrowse link NW_004936473 29,411,696 29,424,947 RGD:9068941
G Znf707 zinc finger protein 707 JBrowse link NW_004936470 8,449,554 8,458,330 RGD:9068941
G Znf891 zinc finger protein 891 JBrowse link NW_004936660 2,874,228 2,882,015 RGD:9068941
G Zscan12 zinc finger and SCAN domain containing 12 JBrowse link NW_004939040 6 8,502 RGD:9068941
regulation of translation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nanos3 nanos C2HC-type zinc finger 3 JBrowse link NW_004936659 2,590,291 2,593,482 RGD:9068941
replication fork processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cenpx centromere protein X JBrowse link NW_004936594 5,517,665 5,520,606 RGD:9068941
resolution of meiotic recombination intermediates term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cenpx centromere protein X JBrowse link NW_004936594 5,517,665 5,520,606 RGD:9068941
retinoic acid catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Crabp1 cellular retinoic acid binding protein 1 JBrowse link NW_004936471 36,665,641 36,672,626 RGD:9068941
retinoic acid metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide JBrowse link NW_004936520 3,467,003 3,489,754 RGD:9068941
retinoid metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide JBrowse link NW_004936520 3,467,003 3,489,754 RGD:9068941
retinol metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide JBrowse link NW_004936520 3,467,003 3,489,754 RGD:9068941
ribonucleoside monophosphate biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Prps1l1 phosphoribosyl pyrophosphate synthetase 1 like 1 JBrowse link NW_004936546 4,332,773 4,333,738 RGD:9068941
RNA phosphodiester bond hydrolysis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ang angiogenin JBrowse link NW_004936880 39,372 40,070 RGD:9068941
G Rnase11 ribonuclease A family member 11 (inactive) JBrowse link NW_004937190 123,663 124,262 RGD:9068941
RNA phosphodiester bond hydrolysis, endonucleolytic term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dgcr8 DGCR8 microprocessor complex subunit JBrowse link NW_004936619 3,977,307 4,014,490 RGD:9068941
G Drosha drosha ribonuclease III JBrowse link NW_004936518 9,100,094 9,218,405 RGD:9068941
RNA processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Drosha drosha ribonuclease III JBrowse link NW_004936518 9,100,094 9,218,405 RGD:9068941
RNA splicing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Nol3 nucleolar protein 3 JBrowse link NW_004936475 17,644,299 17,648,213 RGD:9068941
G Snrnp35 small nuclear ribonucleoprotein U11/U12 subunit 35 JBrowse link NW_004936558 1,297,517 1,302,410 RGD:9068941
rRNA catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Drosha drosha ribonuclease III JBrowse link NW_004936518 9,100,094 9,218,405 RGD:9068941
rRNA transcription term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ang angiogenin JBrowse link NW_004936880 39,372 40,070 RGD:9068941
SCF-dependent proteasomal ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fbxo44 F-box protein 44 JBrowse link NW_004936474 526,191 531,825 RGD:9068941
serine family amino acid metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Srr serine racemase JBrowse link NW_004936538 8,362,033 8,383,820 RGD:9068941
signal transduction by protein phosphorylation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Sbk2 SH3 domain binding kinase family member 2 JBrowse link NW_004936886 739,863 745,971 RGD:9068941
sphingolipid metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Psapl1 prosaposin like 1 JBrowse link NW_004936477 19,100,427 19,102,968 RGD:9068941
telomere capping term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G LOC101966143 histone H4 JBrowse link NW_004936580 173,731 175,254 RGD:9068941
G LOC101967236 histone H4 JBrowse link NW_004936671 2,803,784 2,804,173 RGD:9068941
G LOC101972420 histone H4 JBrowse link NW_004936671 2,019,007 2,019,428 RGD:9068941
G LOC101972801 histone H4 JBrowse link NW_004936671 1,953,045 1,953,612 RGD:9068941
G LOC101974797 histone H4 JBrowse link NW_004936671 1,881,645 1,882,070 RGD:9068941
telomere maintenance term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Hus1b HUS1 checkpoint clamp component B JBrowse link NW_004936633 1,820,063 1,821,150 RGD:9068941
telomere maintenance via semi-conservative replication term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pole2 DNA polymerase epsilon 2, accessory subunit JBrowse link NW_004936583 340,428 386,633 RGD:9068941
termination of RNA polymerase II transcription term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cstf2t cleavage stimulation factor subunit 2 tau variant JBrowse link NW_004936787 838,153 842,118 RGD:9068941
transcription by RNA polymerase II term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dtx1 deltex E3 ubiquitin ligase 1 JBrowse link NW_004936668 3,006,539 3,021,066 RGD:9068941
G Gtf2a1l general transcription factor IIA subunit 1 like JBrowse link NW_004936508 3,989,492 4,049,975 RGD:9068941
G Irf7 interferon regulatory factor 7 JBrowse link NW_004936888 445,340 448,801 RGD:9068941
G Klf13 Kruppel like factor 13 JBrowse link NW_004936483 477,490 575,143 RGD:9068941
G LOC101978306 polyamine-modulated factor 1 JBrowse link NW_004936580 5,454,574 5,479,600 RGD:9068941
G Pax6 paired box 6 JBrowse link NW_004936533 5,952,529 5,980,889 RGD:9068941
G Runx3 RUNX family transcription factor 3 JBrowse link NW_004936474 9,751,946 9,802,910 RGD:9068941
transcription initiation from RNA polymerase II promoter term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Gtf2a1l general transcription factor IIA subunit 1 like JBrowse link NW_004936508 3,989,492 4,049,975 RGD:9068941
G Nr5a1 nuclear receptor subfamily 5 group A member 1 JBrowse link NW_004936487 12,739,445 12,763,729 RGD:9068941
transcription, DNA-templated term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Arnt aryl hydrocarbon receptor nuclear translocator JBrowse link NW_004936580 1,038,420 1,093,319 RGD:9068941
G Dtx1 deltex E3 ubiquitin ligase 1 JBrowse link NW_004936668 3,006,539 3,021,066 RGD:9068941
G Gtf2h2c GTF2H2 family member C JBrowse link NW_004936480 72,730 92,868 RGD:9068941
G Hoxc9 homeobox C9 JBrowse link NW_004936512 11,222,120 11,225,455 RGD:9068941
translation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rpl32 ribosomal protein L32 JBrowse link NW_004936602 982,633 986,458 RGD:9068941
G Rpl36a ribosomal protein L36a JBrowse link NW_004936813 467,505 470,673 RGD:9068941
translational initiation term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Rpl32 ribosomal protein L32 JBrowse link NW_004936602 982,633 986,458 RGD:9068941
G Rpl36a ribosomal protein L36a JBrowse link NW_004936813 467,505 470,673 RGD:9068941
translesion synthesis term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Parp10 poly(ADP-ribose) polymerase family member 10 JBrowse link NW_004936470 8,179,416 8,194,041 RGD:9068941
tricarboxylic acid cycle term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Pdha2 pyruvate dehydrogenase E1 alpha 2 subunit JBrowse link NW_004936717 2,377,982 2,379,137 RGD:9068941
triglyceride metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Cetp cholesteryl ester transfer protein JBrowse link NW_004936475 9,115,126 9,133,071 RGD:9068941
tRNA 3'-end processing term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ptcd1 pentatricopeptide repeat domain 1 JBrowse link NW_004936750 1,684,326 1,699,333 RGD:9068941
tryptophan catabolic process to kynurenine term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Afmid arylformamidase JBrowse link NW_004936594 2,794,927 2,805,689 RGD:9068941
type I interferon biosynthetic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Irf7 interferon regulatory factor 7 JBrowse link NW_004936888 445,340 448,801 RGD:9068941
ubiquitin-dependent ERAD pathway term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Fbxo44 F-box protein 44 JBrowse link NW_004936474 526,191 531,825 RGD:9068941
ubiquitin-dependent protein catabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ube2d4 ubiquitin conjugating enzyme E2 D4 (putative) JBrowse link NW_004936478 18,981,457 19,003,924 RGD:9068941
G Usp29 ubiquitin specific peptidase 29 JBrowse link NW_004936882 752,014 753,981 RGD:9068941
UMP salvage term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Upp2 uridine phosphorylase 2 JBrowse link NW_004936469 20,465,767 20,513,084 RGD:9068941
uridine metabolic process term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Upp2 uridine phosphorylase 2 JBrowse link NW_004936469 20,465,767 20,513,084 RGD:9068941

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 335
    metabolic process 223
      primary metabolic process 209
        carbohydrate metabolic process + 7
        cellular amino acid metabolic process + 5
        lipid metabolic process + 27
        nucleobase-containing compound metabolic process + 125
        protein metabolic process + 100
        regulation of primary metabolic process + 138
        tricarboxylic acid cycle + 1
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.